View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3090_high_56 (Length: 258)
Name: NF3090_high_56
Description: NF3090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3090_high_56 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 10 - 242
Target Start/End: Original strand, 42947059 - 42947291
Alignment:
| Q |
10 |
ataggagaaagaaaaacaaattacgattctgtatattgtggccatgatagagcctgtaaaaatacagaggcatgaaccattagataaaagaggaaacgcc |
109 |
Q |
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| T |
42947059 |
ataggagaaagaaaaacaaattacgattctgtatattgtggccatgatagagcctgtaaaaatacagaggcatgaaccattagataaaagaggaaacgcc |
42947158 |
T |
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| Q |
110 |
caaatcaatcatctaatagaaatgtaagactttaaatgaattatgtccttcgtgtgatttctaatctaatagaaattattgcaattcattcttggtatac |
209 |
Q |
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|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42947159 |
caaatcaatcatctaatagaaatgtaagacattaaatgagttatgtccttcgtgtgatttctaatctaatagaaattattgcaattcattcttggtatac |
42947258 |
T |
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| Q |
210 |
tttagagtataggtccattctatttctaaaaaa |
242 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
42947259 |
tttagagtataggtccattctatttctaaaaaa |
42947291 |
T |
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