View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3090_high_59 (Length: 251)
Name: NF3090_high_59
Description: NF3090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3090_high_59 |
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Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 31608011 - 31608251
Alignment:
| Q |
1 |
atgtaatgaaaagtacatatagtcatagttgaattaaatatattatagtgtaccaaaaatttatatctagaacttttgatttgactggtgagaaannnnn |
100 |
Q |
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| T |
31608011 |
atgtaatgaaaagtacatatagtcatagttgaattaaatatattatagtgtaccaaaaattaatatctagaacttttgatttgactggtgagaaattttt |
31608110 |
T |
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| Q |
101 |
nngaaaatgaattttactcttgatattttacttcttatatgaatannnnnnnagatgtgactagtattaccaagtggttaaaatggtcaccaaaccacaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31608111 |
ttgaaaatgaattttactcttgatattttacttcttatatgaatatttttttagatgtgactagtattaccaagtggttaaaatggtcaccaaaccacaa |
31608210 |
T |
|
| Q |
201 |
gactgtttatatctatggtaagcattattatttgacctttg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
31608211 |
gactgtttatatctatggtaagcattattatttgacctttg |
31608251 |
T |
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