View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3090_low_1 (Length: 875)

Name: NF3090_low_1
Description: NF3090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3090_low_1
NF3090_low_1
[»] chr5 (52 HSPs)
chr5 (586-802)||(38177718-38177934)
chr5 (586-802)||(38204942-38205158)
chr5 (586-796)||(35292019-35292229)
chr5 (586-699)||(32838237-32838350)
chr5 (640-796)||(43317705-43317861)
chr5 (696-802)||(32836976-32837082)
chr5 (586-797)||(35395611-35395817)
chr5 (415-517)||(38597055-38597157)
chr5 (415-535)||(18728496-18728616)
chr5 (415-535)||(32087624-32087744)
chr5 (414-535)||(33256509-33256630)
chr5 (415-538)||(35395443-35395564)
chr5 (415-538)||(38177984-38178107)
chr5 (415-538)||(38205208-38205331)
chr5 (627-797)||(33256716-33256886)
chr5 (415-523)||(43317966-43318074)
chr5 (586-797)||(18728239-18728445)
chr5 (427-538)||(32838391-32838502)
chr5 (627-797)||(32087831-32088001)
chr5 (418-523)||(35292288-35292393)
chr5 (336-420)||(38596867-38596951)
chr5 (332-416)||(38178138-38178222)
chr5 (332-416)||(38205362-38205446)
chr5 (337-420)||(18728643-18728726)
chr5 (337-420)||(43318101-43318184)
chr5 (337-416)||(35395333-35395412)
chr5 (415-523)||(17574428-17574535)
chr5 (415-523)||(18624914-18625022)
chr5 (415-523)||(30468186-30468294)
chr5 (336-420)||(32087513-32087597)
chr5 (336-420)||(40330523-40330607)
chr5 (337-420)||(35292423-35292505)
chr5 (337-414)||(33256400-33256477)
chr5 (415-523)||(2179897-2180005)
chr5 (256-332)||(10044145-10044221)
chr5 (336-420)||(18726564-18726648)
chr5 (336-420)||(32089933-32090017)
chr5 (416-523)||(7267954-7268060)
chr5 (460-523)||(8539830-8539893)
chr5 (337-420)||(32835876-32835959)
chr5 (281-331)||(21369219-21369269)
chr5 (337-419)||(42619289-42619371)
chr5 (415-516)||(36057526-36057627)
chr5 (352-420)||(38176647-38176715)
chr5 (352-420)||(38203871-38203939)
chr5 (280-326)||(25837430-25837476)
chr5 (345-420)||(33257768-33257843)
chr5 (593-707)||(6114888-6115002)
chr5 (347-420)||(17574328-17574401)
chr5 (379-420)||(24496785-24496826)
chr5 (347-420)||(34327645-34327718)
chr5 (347-408)||(36057666-36057727)
[»] chr8 (78 HSPs)
chr8 (586-802)||(42897399-42897615)
chr8 (611-790)||(37525665-37525844)
chr8 (415-541)||(42897662-42897788)
chr8 (415-538)||(1320727-1320850)
chr8 (415-538)||(8654609-8654732)
chr8 (589-797)||(31821692-31821896)
chr8 (415-539)||(37525913-37526037)
chr8 (415-535)||(33750278-33750398)
chr8 (611-794)||(8654804-8654986)
chr8 (586-797)||(33750021-33750227)
chr8 (427-536)||(33160041-33160150)
chr8 (415-520)||(38882706-38882811)
chr8 (586-797)||(32822643-32822855)
chr8 (416-538)||(462263-462383)
chr8 (447-538)||(32822502-32822593)
chr8 (433-538)||(31201034-31201139)
chr8 (337-417)||(33160192-33160272)
chr8 (337-420)||(1320617-1320700)
chr8 (586-705)||(38882518-38882637)
chr8 (586-684)||(462114-462212)
chr8 (336-418)||(42897817-42897899)
chr8 (335-419)||(31821416-31821500)
chr8 (328-420)||(37526064-37526156)
chr8 (337-418)||(462413-462494)
chr8 (447-523)||(9184525-9184601)
chr8 (415-523)||(9673091-9673199)
chr8 (415-535)||(31821528-31821639)
chr8 (332-420)||(40019151-40019239)
chr8 (460-523)||(5036604-5036667)
chr8 (337-420)||(31201184-31201267)
chr8 (415-523)||(8609714-8609821)
chr8 (415-523)||(13108263-13108370)
chr8 (336-420)||(31823484-31823568)
chr8 (415-523)||(38547338-38547445)
chr8 (256-331)||(9402865-9402940)
chr8 (337-420)||(25707309-25707392)
chr8 (256-331)||(30069697-30069772)
chr8 (256-331)||(38869861-38869936)
chr8 (334-420)||(32822358-32822444)
chr8 (640-705)||(31200875-31200940)
chr8 (337-410)||(33748332-33748405)
chr8 (335-420)||(38882838-38882923)
chr8 (415-523)||(7745038-7745146)
chr8 (415-523)||(26242240-26242348)
chr8 (362-410)||(32824289-32824337)
chr8 (376-420)||(33750425-33750469)
chr8 (345-420)||(461184-461259)
chr8 (256-331)||(11257958-11258033)
chr8 (447-506)||(11722732-11722791)
chr8 (413-516)||(22272444-22272547)
chr8 (464-523)||(28433643-28433702)
chr8 (280-331)||(36068408-36068459)
chr8 (256-331)||(36660686-36660761)
chr8 (273-331)||(8072452-8072510)
chr8 (281-331)||(31410975-31411025)
chr8 (413-523)||(42941882-42941992)
chr8 (469-526)||(15145665-15145722)
chr8 (337-414)||(25373636-25373713)
chr8 (460-517)||(40339612-40339669)
chr8 (443-523)||(13486025-13486105)
chr8 (254-298)||(31451374-31451418)
chr8 (256-331)||(35507117-35507193)
chr8 (338-410)||(38881429-38881501)
chr8 (415-523)||(41042510-41042618)
chr8 (443-523)||(41825570-41825650)
chr8 (256-331)||(5895993-5896068)
chr8 (460-523)||(6164658-6164721)
chr8 (256-331)||(26014841-26014916)
chr8 (347-418)||(34681074-34681145)
chr8 (345-420)||(42894784-42894859)
chr8 (266-320)||(6393655-6393709)
chr8 (611-705)||(9184695-9184789)
chr8 (348-418)||(13284003-13284073)
chr8 (335-420)||(9184381-9184466)
chr8 (347-420)||(13282488-13282561)
chr8 (415-488)||(13282588-13282660)
chr8 (347-420)||(27691164-27691237)
chr8 (347-420)||(42943432-42943505)
[»] chr2 (67 HSPs)
chr2 (589-802)||(37417563-37417776)
chr2 (589-802)||(42879600-42879814)
chr2 (22-137)||(32656576-32656691)
chr2 (415-541)||(37417383-37417509)
chr2 (586-798)||(39034-39241)
chr2 (588-797)||(42001893-42002101)
chr2 (415-538)||(25619770-25619893)
chr2 (415-538)||(29909551-29909674)
chr2 (632-797)||(91984-92149)
chr2 (415-535)||(39291-39411)
chr2 (452-538)||(15432475-15432561)
chr2 (424-536)||(42001728-42001840)
chr2 (589-797)||(29909299-29909502)
chr2 (415-535)||(92241-92361)
chr2 (452-538)||(15372646-15372732)
chr2 (415-509)||(42879465-42879559)
chr2 (586-690)||(25619945-25620049)
chr2 (604-705)||(39823-39924)
chr2 (433-538)||(41706667-41706772)
chr2 (337-420)||(37417273-37417356)
chr2 (415-523)||(14389010-14389118)
chr2 (334-410)||(42001607-42001683)
chr2 (337-420)||(29909701-29909784)
chr2 (335-420)||(41150-41235)
chr2 (254-331)||(14776376-14776453)
chr2 (604-705)||(15372799-15372900)
chr2 (460-523)||(10716809-10716872)
chr2 (338-420)||(25619661-25619743)
chr2 (605-758)||(15432626-15432779)
chr2 (640-705)||(41706866-41706931)
chr2 (337-420)||(39438-39521)
chr2 (337-420)||(11021533-11021616)
chr2 (334-420)||(28248183-28248269)
chr2 (261-331)||(32227541-32227611)
chr2 (413-523)||(40560331-40560441)
chr2 (462-523)||(11315263-11315324)
chr2 (335-420)||(15372497-15372582)
chr2 (419-523)||(17696320-17696424)
chr2 (415-523)||(19908172-19908280)
chr2 (415-523)||(39664674-39664782)
chr2 (341-417)||(42879360-42879435)
chr2 (415-523)||(44709671-44709779)
chr2 (341-420)||(39560-39639)
chr2 (460-523)||(6797662-6797725)
chr2 (460-523)||(16763230-16763293)
chr2 (256-331)||(35310299-35310373)
chr2 (337-420)||(41706539-41706622)
chr2 (336-410)||(15373906-15373980)
chr2 (261-331)||(40534323-40534393)
chr2 (337-417)||(15432328-15432408)
chr2 (608-707)||(20941031-20941130)
chr2 (460-523)||(40097703-40097766)
chr2 (337-420)||(41708438-41708521)
chr2 (504-538)||(39723-39757)
chr2 (457-523)||(17946246-17946312)
chr2 (254-316)||(41766403-41766465)
chr2 (469-526)||(862215-862272)
chr2 (254-331)||(41465380-41465457)
chr2 (337-410)||(42880829-42880902)
chr2 (463-523)||(7744201-7744261)
chr2 (256-320)||(10500423-10500487)
chr2 (261-325)||(43305604-43305668)
chr2 (347-418)||(19581424-19581495)
chr2 (281-331)||(35327772-35327822)
chr2 (347-420)||(14389145-14389218)
chr2 (347-420)||(16764617-16764690)
chr2 (256-317)||(27414047-27414108)
[»] chr3 (98 HSPs)
chr3 (586-802)||(23774433-23774645)
chr3 (586-802)||(48634163-48634376)
chr3 (592-797)||(33112817-33113022)
chr3 (415-541)||(18430159-18430285)
chr3 (415-541)||(33852558-33852684)
chr3 (415-541)||(45257108-45257234)
chr3 (422-541)||(23774268-23774387)
chr3 (586-797)||(45898014-45898220)
chr3 (604-797)||(31887083-31887276)
chr3 (415-538)||(24382784-24382907)
chr3 (415-536)||(48633987-48634112)
chr3 (586-731)||(24382588-24382733)
chr3 (415-535)||(23888666-23888786)
chr3 (415-523)||(31887358-31887466)
chr3 (415-541)||(33113069-33113194)
chr3 (415-522)||(1845894-1846001)
chr3 (586-797)||(18429908-18430119)
chr3 (588-797)||(33852313-33852518)
chr3 (586-705)||(2977053-2977172)
chr3 (627-765)||(23888442-23888580)
chr3 (336-414)||(40508958-40509036)
chr3 (606-792)||(41020639-41020825)
chr3 (336-420)||(23774151-23774235)
chr3 (336-420)||(48633876-48633960)
chr3 (415-486)||(40508854-40508925)
chr3 (433-538)||(41020894-41020999)
chr3 (415-523)||(2977235-2977343)
chr3 (256-331)||(972515-972590)
chr3 (337-420)||(18430312-18430395)
chr3 (337-420)||(23888813-23888896)
chr3 (256-331)||(28963358-28963433)
chr3 (336-418)||(45898391-45898473)
chr3 (452-538)||(51454137-51454223)
chr3 (336-420)||(33113221-33113305)
chr3 (413-523)||(23293096-23293206)
chr3 (330-416)||(45257265-45257351)
chr3 (256-332)||(37238762-37238838)
chr3 (337-417)||(51454294-51454374)
chr3 (415-523)||(53190686-53190793)
chr3 (337-420)||(31887493-31887576)
chr3 (330-420)||(1847653-1847743)
chr3 (336-418)||(24382936-24383018)
chr3 (654-800)||(45256854-45256999)
chr3 (337-410)||(41021054-41021127)
chr3 (415-523)||(7884800-7884907)
chr3 (415-523)||(27899007-27899115)
chr3 (415-523)||(42279617-42279725)
chr3 (415-523)||(48830732-48830840)
chr3 (415-523)||(51684720-51684828)
chr3 (256-320)||(52915452-52915516)
chr3 (256-331)||(13863585-13863660)
chr3 (337-420)||(45897050-45897133)
chr3 (347-420)||(30599979-30600052)
chr3 (272-336)||(12568619-12568683)
chr3 (272-336)||(13545083-13545147)
chr3 (415-523)||(30599844-30599952)
chr3 (483-535)||(45898271-45898323)
chr3 (460-523)||(2226079-2226142)
chr3 (460-523)||(17515465-17515528)
chr3 (256-331)||(28945924-28945999)
chr3 (339-410)||(33852721-33852792)
chr3 (415-498)||(39641770-39641853)
chr3 (460-523)||(41977904-41977967)
chr3 (460-523)||(54898591-54898654)
chr3 (262-320)||(7647326-7647383)
chr3 (336-418)||(39641882-39641964)
chr3 (627-705)||(54093011-54093089)
chr3 (347-420)||(38191905-38191978)
chr3 (336-420)||(2977370-2977454)
chr3 (336-420)||(33111840-33111924)
chr3 (415-523)||(35905639-35905746)
chr3 (415-523)||(43765247-43765355)
chr3 (586-689)||(1846067-1846170)
chr3 (452-523)||(5125948-5126019)
chr3 (337-420)||(23887198-23887281)
chr3 (337-420)||(40508493-40508576)
chr3 (337-420)||(48635381-48635464)
chr3 (281-320)||(50360758-50360797)
chr3 (415-517)||(600819-600921)
chr3 (415-523)||(21348833-21348941)
chr3 (337-405)||(40998515-40998583)
chr3 (459-523)||(41623806-41623870)
chr3 (278-330)||(43310558-43310610)
chr3 (415-523)||(44276122-44276230)
chr3 (460-523)||(2377184-2377247)
chr3 (351-410)||(24381758-24381817)
chr3 (256-331)||(35982362-35982437)
chr3 (261-331)||(52378677-52378747)
chr3 (347-420)||(2226213-2226286)
chr3 (345-410)||(18428757-18428822)
chr3 (462-523)||(26449197-26449258)
chr3 (337-410)||(33850982-33851055)
chr3 (347-420)||(38193516-38193589)
chr3 (347-420)||(41979358-41979431)
chr3 (347-420)||(46308817-46308890)
chr3 (347-420)||(53092633-53092706)
chr3 (347-420)||(53094279-53094352)
chr3 (347-420)||(53190820-53190893)
[»] chr1 (80 HSPs)
chr1 (592-797)||(18183581-18183786)
chr1 (418-541)||(45380872-45380995)
chr1 (416-538)||(33685140-33685262)
chr1 (415-541)||(42134592-42134718)
chr1 (586-797)||(6575448-6575660)
chr1 (415-535)||(46638701-46638821)
chr1 (415-535)||(36895404-36895524)
chr1 (627-797)||(46638444-46638614)
chr1 (586-797)||(35479602-35479814)
chr1 (415-535)||(31801743-31801863)
chr1 (414-538)||(44157542-44157665)
chr1 (590-797)||(42134765-42134972)
chr1 (627-797)||(31801950-31802120)
chr1 (426-541)||(18183832-18183947)
chr1 (415-538)||(35479867-35479989)
chr1 (586-797)||(36895148-36895354)
chr1 (605-765)||(45380646-45380806)
chr1 (337-420)||(44157433-44157516)
chr1 (460-538)||(27940763-27940841)
chr1 (447-526)||(6575332-6575411)
chr1 (337-420)||(42134482-42134565)
chr1 (586-797)||(44158068-44158276)
chr1 (606-787)||(47269097-47269278)
chr1 (461-538)||(47269347-47269424)
chr1 (256-331)||(5198899-5198974)
chr1 (337-410)||(27940608-27940681)
chr1 (337-418)||(31801633-31801714)
chr1 (256-329)||(47370288-47370361)
chr1 (415-523)||(6818584-6818692)
chr1 (256-331)||(3491409-3491484)
chr1 (337-420)||(18183984-18184067)
chr1 (334-420)||(36895551-36895637)
chr1 (336-418)||(46638850-46638932)
chr1 (261-331)||(48022817-48022887)
chr1 (337-414)||(35480022-35480099)
chr1 (335-419)||(11152543-11152627)
chr1 (443-523)||(15104579-15104659)
chr1 (415-523)||(34778045-34778152)
chr1 (256-331)||(21276536-21276611)
chr1 (642-797)||(33682860-33683006)
chr1 (254-331)||(298304-298382)
chr1 (604-678)||(27940908-27940982)
chr1 (334-420)||(31803708-31803794)
chr1 (336-410)||(47269507-47269581)
chr1 (337-410)||(33685299-33685372)
chr1 (415-523)||(4855873-4855980)
chr1 (332-420)||(5784875-5784963)
chr1 (457-517)||(51122057-51122117)
chr1 (420-515)||(27087398-27087492)
chr1 (337-420)||(35478087-35478170)
chr1 (261-328)||(38788846-38788913)
chr1 (337-420)||(45379085-45379168)
chr1 (256-331)||(52141472-52141547)
chr1 (413-523)||(3013376-3013486)
chr1 (462-523)||(31238401-31238462)
chr1 (415-523)||(2869689-2869797)
chr1 (407-523)||(33602550-33602666)
chr1 (415-523)||(37344452-37344560)
chr1 (415-523)||(50556003-50556111)
chr1 (345-420)||(27952508-27952583)
chr1 (353-416)||(45381029-45381092)
chr1 (335-410)||(47264122-47264197)
chr1 (281-331)||(15881122-15881172)
chr1 (413-523)||(43868722-43868832)
chr1 (279-329)||(48722696-48722746)
chr1 (347-420)||(27087293-27087366)
chr1 (337-410)||(33679259-33679332)
chr1 (415-523)||(25278274-25278382)
chr1 (255-326)||(943195-943266)
chr1 (464-523)||(5783502-5783561)
chr1 (280-331)||(12521391-12521442)
chr1 (460-523)||(26225460-26225523)
chr1 (261-319)||(38942759-38942817)
chr1 (347-420)||(4856007-4856080)
chr1 (282-331)||(13351543-13351592)
chr1 (347-420)||(31238536-31238609)
chr1 (347-420)||(34778179-34778252)
chr1 (337-410)||(44159312-44159385)
chr1 (347-420)||(46583597-46583670)
chr1 (262-311)||(50176757-50176806)
[»] chr7 (74 HSPs)
chr7 (586-802)||(23954087-23954303)
chr7 (586-790)||(40784628-40784832)
chr7 (592-782)||(27955657-27955846)
chr7 (415-535)||(46996596-46996716)
chr7 (415-523)||(23953915-23954023)
chr7 (627-797)||(46996339-46996512)
chr7 (419-541)||(47341570-47341696)
chr7 (415-535)||(33038691-33038811)
chr7 (586-719)||(2167755-2167888)
chr7 (447-535)||(40784488-40784576)
chr7 (586-797)||(33038438-33038648)
chr7 (586-705)||(38613746-38613865)
chr7 (420-535)||(46812476-46812591)
chr7 (586-742)||(46812269-46812425)
chr7 (433-538)||(8423172-8423277)
chr7 (415-523)||(2167589-2167697)
chr7 (415-523)||(27955480-27955588)
chr7 (336-420)||(47341727-47341811)
chr7 (337-420)||(38613522-38613605)
chr7 (433-538)||(35344181-35344286)
chr7 (418-523)||(2492439-2492544)
chr7 (586-797)||(47341324-47341532)
chr7 (335-417)||(46996746-46996828)
chr7 (604-705)||(8423004-8423105)
chr7 (337-418)||(23953805-23953886)
chr7 (604-705)||(35344013-35344114)
chr7 (328-420)||(33038838-33038930)
chr7 (328-420)||(38614952-38615044)
chr7 (452-523)||(38613610-38613681)
chr7 (393-523)||(46439436-46439566)
chr7 (337-420)||(8423322-8423405)
chr7 (254-316)||(6727203-6727265)
chr7 (256-329)||(38073568-38073641)
chr7 (415-523)||(35693276-35693384)
chr7 (334-420)||(8421413-8421499)
chr7 (256-326)||(20884452-20884522)
chr7 (334-420)||(46994657-46994743)
chr7 (339-420)||(46810707-46810788)
chr7 (415-523)||(1546397-1546505)
chr7 (336-420)||(4321037-4321121)
chr7 (332-420)||(30108560-30108648)
chr7 (415-523)||(39859135-39859243)
chr7 (337-420)||(2167479-2167562)
chr7 (337-420)||(35342425-35342508)
chr7 (337-420)||(35344331-35344414)
chr7 (337-420)||(45465192-45465275)
chr7 (337-420)||(46812623-46812706)
chr7 (413-523)||(6056874-6056984)
chr7 (337-414)||(2492327-2492404)
chr7 (347-420)||(13169689-13169762)
chr7 (413-506)||(37796104-37796197)
chr7 (462-523)||(48704337-48704398)
chr7 (338-410)||(3690151-3690223)
chr7 (415-523)||(6602445-6602553)
chr7 (261-325)||(39854087-39854151)
chr7 (337-417)||(40784346-40784426)
chr7 (464-523)||(34691133-34691192)
chr7 (261-320)||(45513092-45513151)
chr7 (452-526)||(31913616-31913690)
chr7 (278-331)||(21148493-21148546)
chr7 (255-316)||(21388008-21388069)
chr7 (469-526)||(23962468-23962525)
chr7 (337-418)||(38614802-38614883)
chr7 (415-523)||(13168233-13168341)
chr7 (415-523)||(45359446-45359554)
chr7 (336-420)||(45463669-45463753)
chr7 (460-523)||(34776821-34776884)
chr7 (464-523)||(45463808-45463867)
chr7 (278-320)||(8073552-8073594)
chr7 (262-320)||(16099254-16099312)
chr7 (347-420)||(27666106-27666179)
chr7 (337-414)||(27955370-27955447)
chr7 (347-420)||(35403625-35403698)
chr7 (345-410)||(36762698-36762763)
[»] chr4 (76 HSPs)
chr4 (415-537)||(35996173-35996295)
chr4 (415-539)||(51041821-51041945)
chr4 (586-797)||(2827685-2827891)
chr4 (586-797)||(27625072-27625284)
chr4 (415-538)||(2350395-2350521)
chr4 (415-535)||(2827514-2827634)
chr4 (415-523)||(4519486-4519594)
chr4 (586-746)||(44558174-44558334)
chr4 (433-538)||(47941939-47942044)
chr4 (604-794)||(2350145-2350335)
chr4 (604-705)||(4519668-4519769)
chr4 (415-538)||(44558384-44558507)
chr4 (606-792)||(10762883-10763069)
chr4 (420-526)||(27624921-27625027)
chr4 (604-794)||(35996363-35996553)
chr4 (604-765)||(10372339-10372500)
chr4 (433-538)||(44794651-44794756)
chr4 (336-420)||(44558534-44558618)
chr4 (433-538)||(10762709-10762814)
chr4 (586-716)||(51041645-51041775)
chr4 (336-418)||(51041973-51042055)
chr4 (334-410)||(10372757-10372833)
chr4 (336-415)||(4519375-4519454)
chr4 (604-699)||(44794489-44794584)
chr4 (337-418)||(2827407-2827485)
chr4 (433-524)||(10372611-10372702)
chr4 (335-410)||(10762579-10762654)
chr4 (337-420)||(39923015-39923098)
chr4 (261-331)||(53039380-53039450)
chr4 (337-410)||(2350558-2350631)
chr4 (460-523)||(2693159-2693222)
chr4 (256-331)||(22409325-22409400)
chr4 (337-420)||(44794801-44794884)
chr4 (334-410)||(42879272-42879348)
chr4 (336-420)||(44992807-44992891)
chr4 (415-523)||(51012036-51012143)
chr4 (256-331)||(38794100-38794175)
chr4 (337-420)||(43778389-43778472)
chr4 (337-410)||(2828429-2828502)
chr4 (337-410)||(10371057-10371130)
chr4 (462-523)||(11255846-11255907)
chr4 (458-523)||(27382270-27382335)
chr4 (334-410)||(39085170-39085246)
chr4 (336-420)||(44792933-44793017)
chr4 (443-523)||(48646653-48646733)
chr4 (337-416)||(4520463-4520542)
chr4 (256-331)||(10109323-10109398)
chr4 (256-331)||(20574852-20574927)
chr4 (444-523)||(26296800-26296879)
chr4 (337-420)||(27624806-27624889)
chr4 (333-420)||(39083635-39083722)
chr4 (337-420)||(47941811-47941894)
chr4 (261-331)||(32318619-32318689)
chr4 (256-302)||(42898964-42899010)
chr4 (469-523)||(50131326-50131380)
chr4 (262-331)||(18994592-18994661)
chr4 (462-523)||(25993653-25993714)
chr4 (280-316)||(4960373-4960409)
chr4 (337-405)||(10767973-10768041)
chr4 (415-523)||(42980745-42980853)
chr4 (443-523)||(48813925-48814005)
chr4 (464-523)||(11601829-11601888)
chr4 (261-320)||(26526740-26526799)
chr4 (256-331)||(30537921-30537996)
chr4 (464-523)||(39083777-39083836)
chr4 (464-523)||(39189520-39189579)
chr4 (650-708)||(25993847-25993905)
chr4 (334-420)||(39921491-39921577)
chr4 (415-517)||(41761658-41761760)
chr4 (376-417)||(230475-230516)
chr4 (347-420)||(4173746-4173819)
chr4 (347-420)||(41761787-41761860)
chr4 (347-420)||(43507177-43507250)
chr4 (347-420)||(43508659-43508732)
chr4 (347-420)||(43519434-43519507)
chr4 (337-410)||(47942764-47942837)
[»] chr6 (33 HSPs)
chr6 (433-538)||(29077456-29077561)
chr6 (433-535)||(2968267-2968369)
chr6 (606-791)||(29077630-29077815)
chr6 (460-538)||(4641510-4641588)
chr6 (433-538)||(29112428-29112533)
chr6 (606-791)||(29112602-29112787)
chr6 (415-523)||(3018338-3018446)
chr6 (604-705)||(2968425-2968526)
chr6 (604-705)||(4641655-4641756)
chr6 (327-410)||(29077318-29077401)
chr6 (413-523)||(10568507-10568617)
chr6 (415-523)||(7049867-7049975)
chr6 (415-523)||(9398770-9398878)
chr6 (415-523)||(11355332-11355440)
chr6 (256-320)||(33972587-33972651)
chr6 (337-420)||(4641355-4641438)
chr6 (337-410)||(30639611-30639684)
chr6 (352-420)||(3018473-3018541)
chr6 (415-523)||(20523476-20523584)
chr6 (337-420)||(2968139-2968222)
chr6 (460-523)||(14338381-14338444)
chr6 (337-420)||(17950561-17950644)
chr6 (327-410)||(29112290-29112373)
chr6 (462-523)||(24662615-24662676)
chr6 (415-523)||(6899595-6899703)
chr6 (624-731)||(30641033-30641137)
chr6 (452-523)||(30891271-30891342)
chr6 (273-331)||(8853719-8853777)
chr6 (336-410)||(29114794-29114868)
chr6 (458-523)||(25172015-25172080)
chr6 (332-420)||(17952083-17952171)
chr6 (487-538)||(30641220-30641271)
chr6 (415-506)||(32439015-32439105)
[»] scaffold0477 (2 HSPs)
scaffold0477 (433-538)||(6525-6630)
scaffold0477 (337-420)||(6675-6758)
[»] scaffold0129 (2 HSPs)
scaffold0129 (413-526)||(4567-4680)
scaffold0129 (283-331)||(37631-37679)
[»] scaffold1454 (1 HSPs)
scaffold1454 (415-523)||(1373-1480)
[»] scaffold0007 (1 HSPs)
scaffold0007 (256-331)||(260290-260365)
[»] scaffold0154 (1 HSPs)
scaffold0154 (282-331)||(36353-36402)
[»] scaffold0058 (2 HSPs)
scaffold0058 (347-420)||(3304-3377)
scaffold0058 (347-420)||(4476-4549)
[»] scaffold0564 (1 HSPs)
scaffold0564 (467-523)||(8422-8478)
[»] scaffold0102 (1 HSPs)
scaffold0102 (256-312)||(21356-21412)
[»] scaffold0024 (1 HSPs)
scaffold0024 (463-523)||(37362-37422)
[»] scaffold1041 (1 HSPs)
scaffold1041 (378-420)||(2139-2181)


Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-104; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 586 - 802
Target Start/End: Complemental strand, 38177934 - 38177718
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  38177934 ccctgcattacccatacttccttcctcacatttctctcagaaacataaaaaacgtccttgactcttctccttcctgctaaaactttctccattctcacct 38177835  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38177834 ctccaaaaccatcatcatcttcgatgattctcacgtttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 38177735  T
Q  786 tgtgttcgtatttacca 802  Q
    |||||||||||||||||    
T  38177734 tgtgttcgtatttacca 38177718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 586 - 802
Target Start/End: Complemental strand, 38205158 - 38204942
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  38205158 ccctgcattacccatacttccttcctcacatttctctcagaaacataaaaaacgtccttgactcttctccttcctgctaaaactttctccattctcacct 38205059  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38205058 ctccaaaaccatcatcatcttcgatgattctcacgtttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 38204959  T
Q  786 tgtgttcgtatttacca 802  Q
    |||||||||||||||||    
T  38204958 tgtgttcgtatttacca 38204942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 586 - 796
Target Start/End: Complemental strand, 35292229 - 35292019
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||| ||||||||||  |||||||||||||| | ||||||||||| |||||  |||||||  |||||||||||| ||||||||||||||||||||||||    
T  35292229 ccctgtattacccatacctccttcctcacattccactcagaaacatcaaaaacatccttgatccttctccttccccctaaaactttctccattctcacct 35292130  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||  ||||||||| ||||| |||||  ||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  35292129 ctccaaaatcatcatcatctccggcgattctcacgtttttaaagtttctgtgttcggctgtggttaaaggtaaaacctttcctctagtttatcaagtttc 35292030  T
Q  786 tgtgttcgtat 796  Q
    | |||||||||    
T  35292029 tatgttcgtat 35292019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 586 - 699
Target Start/End: Complemental strand, 32838350 - 32838237
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  32838350 ccctgcattacccatacttccttcctcacatttctctcagaaacataaaaaacgtcattgactcttctccttcccgctaaaactttctccattctcacct 32838251  T
Q  686 ctccaaaaccatca 699  Q
    ||||||||||||||    
T  32838250 ctccaaaaccatca 32838237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 640 - 796
Target Start/End: Complemental strand, 43317861 - 43317705
Alignment:
Q  640 tccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgtt 739  Q
    |||||||| |||||||| ||| ||||||||||||||||||||||||| |||||| ||||| ||||| ||  |||||||   |||||||| ||  ||||||    
T  43317861 tccttgacccttctcctcccccctaaaactttctccattctcacctccccaaaatcatcatcatctccggcgattctcttgtttttgaaatttctgtgtt 43317762  T
Q  740 cggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtat 796  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  43317761 cggttgtggttaaaggtaacacctttcctctagtttatcaagtttctatgttcgtat 43317705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 696 - 802
Target Start/End: Complemental strand, 32837082 - 32836976
Alignment:
Q  696 atcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgta 795  Q
    |||| ||||||||| |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32837082 atcatcatcttcgacgattttcacgtttttgaagttgttgtgttcggctgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgta 32836983  T
Q  796 tttacca 802  Q
    |||||||    
T  32836982 tttacca 32836976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 586 - 797
Target Start/End: Original strand, 35395611 - 35395817
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| |||||||||    |||| ||| ||| | ||||||||| ||||| |||||||||||||||| ||||||| |||||     
T  35395611 ccctgcattacccatacctccttcttcacatttc----agaa-catcaaacacgtccttgacccttcttcttcccgctaaaacttcctccattttcaccc 35395705  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||| |||||| ||||||||||||||  ||||||||| |||| ||||||||||| |||||| | |  |||||||||||||    
T  35395706 ctccaaaatcatcatcatctccgacgattctgacatttttgaagtttgtgtgttcggctgtgattaaaggtaacgcctttcttgttgtttatcaagtttc 35395805  T
Q  786 tgtgttcgtatt 797  Q
    ||||||||||||    
T  35395806 tgtgttcgtatt 35395817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 415 - 517
Target Start/End: Original strand, 38597055 - 38597157
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  38597055 gtccctctgtccaagtgttccgttagccgtgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccgcgtgttcaaggac 38597154  T
Q  515 taa 517  Q
    |||    
T  38597155 taa 38597157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 18728616 - 18728496
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||||| || ||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  18728616 gtccctccgtccaagtgctctgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttaagggac 18728517  T
Q  515 taatttgattgatttggaaaa 535  Q
    |||||||||||| ||||||||    
T  18728516 taatttgattgaattggaaaa 18728496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 415 - 535
Target Start/End: Original strand, 32087624 - 32087744
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||||| || |||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  32087624 gtccctccgtccaagtgctctgttagccttgctgatctatcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggac 32087723  T
Q  515 taatttgattgatttggaaaa 535  Q
    |||||||||||| ||||||||    
T  32087724 taatttgattgaattggaaaa 32087744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 414 - 535
Target Start/End: Original strand, 33256509 - 33256630
Alignment:
Q  414 agtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagga 513  Q
    |||||||||||||||||  |||||||||| || ||||||||| || |||||| |||||||||||||||  |||||||||||||||||||||||||| |||    
T  33256509 agtccctccgtccaagtcctccgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacgagtggcaagaaggaagccacgtgttcaggga 33256608  T
Q  514 ctaatttgattgatttggaaaa 535  Q
    ||||||||||||| ||| ||||    
T  33256609 ctaatttgattgaattgaaaaa 33256630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 415 - 538
Target Start/End: Original strand, 35395443 - 35395564
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||||| || |||| ||||||| ||||||  |||||||||||||| |||||||||||||||||||| |||||| ||||    
T  35395443 gtccctccgtccaagtgctctgttagccatgctgatatgtcgccttgcatg--gtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggac 35395540  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    |||||||||||| |||||||||||    
T  35395541 taatttgattgaattggaaaaagt 35395564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 38178107 - 38177984
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||| |||||| ||| |||||||||| || |||| ||||| |||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  38178107 gtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgtgttcaaggac 38178008  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    ||| |||||||||||| |||||||    
T  38178007 taacttgattgatttgaaaaaagt 38177984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 38205331 - 38205208
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||| |||||| ||| |||||||||| || |||| ||||| |||||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  38205331 gtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgtgttcaaggac 38205232  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    ||| |||||||||||| |||||||    
T  38205231 taacttgattgatttgaaaaaagt 38205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 797
Target Start/End: Original strand, 33256716 - 33256886
Alignment:
Q  627 aacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttg 726  Q
    ||||| ||||| | ||||||| ||||| |||| | ||||||||| ||||||| ||||| |||||||| ||||| ||||| ||  |||| | |||||||||    
T  33256716 aacatcaaaaacgaccttgacacttcttcttctcactaaaacttcctccattttcacccctccaaaatcatcatcatctccggcgattttgacatttttg 33256815  T
Q  727 aagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
    |||||  |||||||||||||| ||||||||||| |||||||| |  |||||||||||| ||||||||||||    
T  33256816 aagtttgtgtgttcggttgtgattaaaggtaacgcctttcctgttgtttatcaagtttttgtgttcgtatt 33256886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 43318074 - 43317966
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||||| ||  ||| |||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  43318074 gtccctccgtccaagtgctctgttagccatgccgatatgtcgcccagcatgttgtgctgtcttgtacatgtggcaaaaaggaagccacgtgttcaaggac 43317975  T
Q  515 taatttgat 523  Q
    |||||||||    
T  43317974 taatttgat 43317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 18728445 - 18728239
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| |||||||||    |||| ||| ||||| ||| ||||| ||||| |||| ||||||||||| ||||||| |||||     
T  18728445 ccctgcattacccatacctccttcttcacatttc----agaa-catcaaaaacgtctttgacccttcttcttctcgctaaaacttcctccattttcaccc 18728351  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||  ||||||  |||||||||||||  ||||||||| |||| ||||||||||  |||||||| |  ||||||||||||     
T  18728350 ctccaaaatcatcatcatctccggcgattctaccatttttgaagtttgtgtgttcggctgtgattaaaggtaatgcctttcctgttgtttatcaagtttt 18728251  T
Q  786 tgtgttcgtatt 797  Q
    |||||| |||||    
T  18728250 tgtgtttgtatt 18728239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 427 - 538
Target Start/End: Complemental strand, 32838502 - 32838391
Alignment:
Q  427 aagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattga 526  Q
    ||||| |||||||| | || |||| ||||| ||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||    
T  32838502 aagtgctccgttagtcatgttgatatgtcgtcctacatgctgtgttgtcttgtacacatagcaagaaggaagccacgtgttcaaggaataatttgaatga 32838403  T
Q  527 tttggaaaaagt 538  Q
    ||||||||||||    
T  32838402 tttggaaaaagt 32838391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 627 - 797
Target Start/End: Original strand, 32087831 - 32088001
Alignment:
Q  627 aacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttg 726  Q
    ||||| ||||| ||||||||| ||||| |||| ||||||||||| |||||||  |||| |||||||| ||||| ||||| |   |||| |  ||||||||    
T  32087831 aacatcaaaaacgtccttgacccttcttcttctcgctaaaacttcctccatttccacccctccaaaatcatcatcatctccagcgattataccatttttg 32087930  T
Q  727 aagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
    |||||  ||||||||| |||| |||||||||||||||||||| |  |||||||||||| |||||| |||||    
T  32087931 aagtttgtgtgttcggctgtgattaaaggtaacacctttcctgttgtttatcaagtttttgtgttagtatt 32088001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 418 - 523
Target Start/End: Complemental strand, 35292393 - 35292288
Alignment:
Q  418 cctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 517  Q
    ||||||||||| || |||||||||  |  |||||||||||||  ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  35292393 cctccgtccaaatgctccgttagctattctgatctgtcgcccaacatgttgtgctgtcttgtacacgtggcaaaaaggaagctacgtgttcaaggactaa 35292294  T
Q  518 tttgat 523  Q
    ||||||    
T  35292293 tttgat 35292288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 38596867 - 38596951
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||||||| |||||| |  ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  38596867 tgagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccct 38596951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 38178222 - 38178138
Alignment:
Q  332 ttaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagt 416  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||  |||||||||||||||||||||||| |||||    
T  38178222 ttaatgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagt 38178138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 332 - 416
Target Start/End: Complemental strand, 38205446 - 38205362
Alignment:
Q  332 ttaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagt 416  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| || ||||||  |||||||||||||||||||||||| |||||    
T  38205446 ttaatgagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagt 38205362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 18728726 - 18728643
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||| | |||||||||  || |||||| || |||||| ||||||||||||||||||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccct 18728643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 43318184 - 43318101
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||||| |||||| |  ||| ||||||| |  ||||||||||||||||||||||||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccct 43318101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 416
Target Start/End: Original strand, 35395333 - 35395412
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagt 416  Q
    |||||||||||||||||| ||| | |||||||||| || |||||| || ||||||||||||||||||||||||| |||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagt 35395412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 17574428 - 17574535
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  |||| || |||||| |||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  17574428 gtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 17574526  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  17574527 taaattgat 17574535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 18625022 - 18624914
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||| |||||||||  | ||||||||  |||||||| ||||  | |||||||||||||||||| |||||||| ||| |||| | |||||||| |||||||    
T  18625022 gtccttccgtccaaaagctccgttagtagtgatgatgtgtcttcttgcatgttgtgttgtcttatacacgtgtcaacaaggcaaccacgtgtacaaggac 18624923  T
Q  515 taatttgat 523  Q
    |||||||||    
T  18624922 taatttgat 18624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 30468294 - 30468186
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||  | |||||||||||||||| |||||||||| ||| |||| | |||||||| |||||||    
T  30468294 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcaaccacgtgtacaaggac 30468195  T
Q  515 taatttgat 523  Q
    |||||||||    
T  30468194 taatttgat 30468186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 32087513 - 32087597
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||||| | |||||||||  || |  ||| || |||||| ||||||||||||||||||||||||||||    
T  32087513 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtccct 32087597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 40330607 - 40330523
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||| |||||| ||||||| | ||||||||| ||| ||||||| | ||||||||||||||||||||||||| ||| |||||    
T  40330607 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccct 40330523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 35292505 - 35292423
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||||| |||||| |  ||| ||||||| |  ||| ||||||||||||||||||||||||||||||    
T  35292505 gagtgaaccatcaaattcgtccttgaatttttatgggt-ggccaaaatcatccttcaattatgcgaaatatcaacttagtccct 35292423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 414
Target Start/End: Original strand, 33256400 - 33256477
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaactta 414  Q
    |||||||||||||||||||||| | |||||| ||| || |||||| ||  ||| ||||||||||||||||||||||||    
T  33256400 gagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaactta 33256477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 2179897 - 2180005
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||| ||||  |||||||  ||||  | |||||||||||||||| |||||||||| ||| |||| |||||| ||| |||||||    
T  2179897 gtccctccgtccaaaagctccattagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacatgtacaaggac 2179996  T
Q  515 taatttgat 523  Q
    |||||||||    
T  2179997 taatttgat 2180005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 10044145 - 10044221
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaat 332  Q
    |||| ||||||||||| |||| |  ||||||||| || ||||||||||||||||||||||||||| || ||||||||    
T  10044145 tcatgttaacttgtgtccttaggatacatgttaaacactaatttcatttcattaatggtaagaatttattgaaaaat 10044221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 18726564 - 18726648
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||| |||||| ||||||| | |||||| || ||||  |||| || ||||||||||||||||||||||||| |||||||||    
T  18726564 tgagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtccct 18726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 32090017 - 32089933
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||| |||||| ||||||| | |||||| || ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  32090017 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 32089933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 416 - 523
Target Start/End: Original strand, 7267954 - 7268060
Alignment:
Q  416 tccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggact 515  Q
    |||||||||||||  | ||||||||  |||||||  |||| | | ||||| |||||||||||||||||||| ||| |||| |||||||||| ||||||||    
T  7267954 tccctccgtccaaaagctccgttagtggtgatgacgtgtccctc-gcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggact 7268052  T
Q  516 aatttgat 523  Q
    || |||||    
T  7268053 aaattgat 7268060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 8539830 - 8539893
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||||||| |||||||||| ||| |||| |||||||||| |||||||||| |||||    
T  8539830 tgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtgcaaggactaaattgat 8539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 32835876 - 32835959
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||| | ||||||||| ||| || |||||| |||||| |||||||||||||||||| ||| |||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccct 32835959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 21369269 - 21369219
Alignment:
Q  281 acatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  21369269 acatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaa 21369219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 419
Target Start/End: Original strand, 42619289 - 42619371
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccc 419  Q
    ||||||| |||||| ||||||| | ||||||||| ||| || ||| || ||||||||||||||||||||||||| ||| ||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatccc 42619371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 415 - 516
Target Start/End: Complemental strand, 36057627 - 36057526
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | |||||||   |||||||| ||||  | |||||||||||||||| |||||||||| ||| |||| |||||| ||| |||||||    
T  36057627 gtccctccgtccaaaagctccgttaatggtgatgatgtgtcatcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacatgtacaaggac 36057528  T
Q  515 ta 516  Q
    ||    
T  36057527 ta 36057526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 38176647 - 38176715
Alignment:
Q  352 ttcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| | ||||||||  ||||||||||||| |||||| |||||||||||||||||| ||| |||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccct 38176715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 38203871 - 38203939
Alignment:
Q  352 ttcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| | ||||||||  ||||||||||||| |||||| |||||||||||||||||| ||| |||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccct 38203939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 25837476 - 25837430
Alignment:
Q  280 cacatgttaagcattaatttcatttcattaatggtaagaatataatg 326  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||    
T  25837476 cacatgttaagcattaatttcattatattaatggtaagaatttaatg 25837430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 33257843 - 33257768
Alignment:
Q  345 catcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||| ||||||| | |||||| || ||| |||||| || |||||| |||||||||||||||||| ||| |||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccct 33257768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 593 - 707
Target Start/End: Original strand, 6114888 - 6115002
Alignment:
Q  593 ttacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaa 692  Q
    ||||||||  |||| |||||||||||   |||||||||| ||    ||||||||||||||||||| |||||||||| ||  ||||  ||| |||||||||    
T  6114888 ttacccatccttccatcctcacattttattcagaaacatcaatccggtccttgactcttctcctttccgctaaaaccttaaccatcttcatctctccaaa 6114987  T
Q  693 accatcaccatcttc 707  Q
    | || || |||||||    
T  6114988 agcaccatcatcttc 6115002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 17574328 - 17574401
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | ||||||||| |||||| |||| ||||||||||| | |||||||||    
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccct 17574401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 24496785 - 24496826
Alignment:
Q  379 caaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||| |||||||||| ||| |||||    
T  24496785 caaatttgtccctcaattatgtgaaatatcaaattaatccct 24496826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 34327645 - 34327718
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||||  |  ||||||||||| ||| || |||| ||||||||||| | |||||||||    
T  34327645 tcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccct 34327718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 408
Target Start/End: Complemental strand, 36057727 - 36057666
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatc 408  Q
    |||||||||||||| |||||||| |  | ||||||||| |||||| |||| |||||||||||    
T  36057727 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatc 36057666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 2e-97; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 586 - 802
Target Start/End: Complemental strand, 42897615 - 42897399
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||     
T  42897615 ccctgcattaccgatacttccttcctcacatttctctcagaaacataaaaaacgttcttgactcttctccttcccgctaaaactttctccattctcacca 42897516  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42897515 ctccaaaaccatcatcatcttcgacgattctcacgtttttgaagttgttgtgttcggctgtggttaaaggtaacacctttcctctaatttatcaagtttc 42897416  T
Q  786 tgtgttcgtatttacca 802  Q
    |||||||||||||||||    
T  42897415 tgtgttcgtatttacca 42897399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 611 - 790
Target Start/End: Complemental strand, 37525844 - 37525665
Alignment:
Q  611 tcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgag 710  Q
    ||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||  |      
T  37525844 tcacatttcactcataagcataaaaaatggccttgactcttctccttcccgctaaaactttcttcattctcacccctccaaaatcatcatcatctctggc 37525745  T
Q  711 gattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgt 790  Q
    ||||||||| | | ||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  37525744 gattctcacgtctgtgaagtttttgtgttcggttgtggttaaaggtaacacatttcctatagtttatcaagtttctgtgt 37525665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 42897788 - 42897662
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||||| || |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42897788 gtccctccgtccaagtgctctgttagccatgctgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 42897689  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    |||||||||| ||||||||||||||||    
T  42897688 taatttgatttatttggaaaaagtcca 42897662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 415 - 538
Target Start/End: Original strand, 1320727 - 1320850
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||| |||||||||||||||||| |||| || |||  |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  1320727 gtccttccgtccaagtgttccgtcagccatggtgacatgtcgccctgcatgctatgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 1320826  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    |||||||||||| ||| |||||||    
T  1320827 taatttgattgaattgaaaaaagt 1320850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 415 - 538
Target Start/End: Original strand, 8654609 - 8654732
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||  ||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||    
T  8654609 gtccctccgtccaagtgctccgttagccatgctgacatgtcgccctgcatgcaatgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggac 8654708  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    |||||||||||| |||||||||||    
T  8654709 taatttgattgaattggaaaaagt 8654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 589 - 797
Target Start/End: Original strand, 31821692 - 31821896
Alignment:
Q  589 tgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctc 688  Q
    |||||||||||||  |||||| |||||||||    |||| ||||||||||||||||||| ||||| |||  ||||||||||| ||||||| ||||| |||    
T  31821692 tgcattacccatacatccttcttcacatttc----agaa-cataaaaaatgtccttgacccttcttcttatcgctaaaacttcctccattttcacccctc 31821786  T
Q  689 caaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggt-aacacctttcctctaatttatcaagtttctg 787  Q
    ||||| ||||| ||||| ||  |||||| ||||||||||||||  |||||||||||||| |||||||| ||| |||||||| |  |||||||||||| ||    
T  31821787 caaaatcatcatcatctccggcgattctgacatttttgaagtttgtgtgttcggttgtgattaaaggtaaacgcctttcctgttgtttatcaagtttttg 31821886  T
Q  788 tgttcgtatt 797  Q
    ||||||||||    
T  31821887 tgttcgtatt 31821896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 415 - 539
Target Start/End: Complemental strand, 37526037 - 37525913
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||||||||||||  | ||||| | || |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37526037 gtccctccgtccaagtgcgctgttagtcatgttgatctgtcgtcctgtatgttgtgttgtcttatacacgtggcaagaaggaagccacgtgttcaaggac 37525938  T
Q  515 taatttgattgatttggaaaaagtc 539  Q
    |||||||||| | ||||||||||||    
T  37525937 taatttgattcaattggaaaaagtc 37525913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 33750398 - 33750278
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||||  || |||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  33750398 gtccctccgtccaagtgctctgttagcgatgttgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccatgtgttcagggac 33750299  T
Q  515 taatttgattgatttggaaaa 535  Q
     ||||||||||| ||||||||    
T  33750298 gaatttgattgaattggaaaa 33750278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 611 - 794
Target Start/End: Original strand, 8654804 - 8654986
Alignment:
Q  611 tcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgag 710  Q
    |||||||||  |||||||||| |||||  || |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||      
T  8654804 tcacatttcagtcagaaacatcaaaaacatcattgactcttctccttcccgctaaaactttctccattctcacccctccaaaatcatcatcatctccg-c 8654902  T
Q  711 gattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgt 794  Q
     ||||| ||||||||||||||  ||||||||  |||| | ||||||||| |||||| | |  ||||||||| ||| ||||||||    
T  8654903 aattctgacatttttgaagttcctgtgttcgactgtgatcaaaggtaacgcctttcattttgtttatcaagattcagtgttcgt 8654986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 33750227 - 33750021
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| ||||||||||      ||||| ||||| ||||||||| ||| | |||| ||||||||||| || |||| |||||     
T  33750227 ccctgcattacccatacctccttcttcacatttctg-----aacatcaaaaacgtccttgaccctttttcttctcgctaaaacttccttcattttcaccc 33750133  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||| |||||| ||||||||||||||  ||||||| | | || |||||||||||||||||||| |  ||||||||||||     
T  33750132 ctccaaaatcatcatcatctccgatgattctgacatttttgaagtttgtgtgttctgctctgattaaaggtaacacctttcctgttgtttatcaagtttt 33750033  T
Q  786 tgtgttcgtatt 797  Q
    |||||| |||||    
T  33750032 tgtgtttgtatt 33750021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 427 - 536
Target Start/End: Complemental strand, 33160150 - 33160041
Alignment:
Q  427 aagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagc-cacgtgttcaaggactaatttgattg 525  Q
    ||||| || ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  33160150 aagtgctctgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaag-aagctcacgtgttcaaggactaatttgattg 33160052  T
Q  526 atttggaaaaa 536  Q
    | |||||||||    
T  33160051 aattggaaaaa 33160041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 415 - 520
Target Start/End: Complemental strand, 38882811 - 38882706
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||||||||| |||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  38882811 gtccctccgtccaagtgctccgttagccatgttgatctgtcgtcctgcatgctgtgttgtcttgtactcgtggcaacaaggaagtcacgtgttcaaggac 38882712  T
Q  515 taattt 520  Q
     |||||    
T  38882711 caattt 38882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 586 - 797
Target Start/End: Original strand, 32822643 - 32822855
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    |||| |||||||||||  |||||| |||||||||  ||||||| |||||||| ||| ||||| |||||||||||| |||||||||| | ||||||| |||    
T  32822643 ccctacattacccatacctccttcttcacatttcagtcagaaaaataaaaaacgtcattgacccttctccttcccactaaaactttattcattctcgcct 32822742  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggtt---aaaggtaacacctttcctctaatttatcaagt 782  Q
    || ||||| ||||| ||||| ||| |||||| || |||||||||||  ||| |||||||||  ||   ||||||||| | |||||| |  ||||||||||    
T  32822743 cttcaaaatcatcatcatctccgacgattctgacgtttttgaagtttctgtattcggttgt--ttcaaaaaggtaacgcttttcctattgtttatcaagt 32822840  T
Q  783 ttctgtgttcgtatt 797  Q
    || ||||| ||||||    
T  32822841 ttatgtgtccgtatt 32822855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 416 - 538
Target Start/End: Complemental strand, 462383 - 462263
Alignment:
Q  416 tccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggact 515  Q
    ||||||| |||||||| || ||||||| || |||| ||||||| ||||||||||||| |||| |||||||||||||||||||||   |||||||||||||    
T  462383 tccctccatccaagtgctctgttagccatgctgatttgtcgccgtgcatgttgtgttatcttatacacgtggcaagaaggaagc--agtgttcaaggact 462286  T
Q  516 aatttgattgatttggaaaaagt 538  Q
    ||||||||||| || ||||||||    
T  462285 aatttgattgaatttgaaaaagt 462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 447 - 538
Target Start/End: Original strand, 32822502 - 32822593
Alignment:
Q  447 tgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    |||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  32822502 tgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgattgaatttgaaaaagt 32822593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 433 - 538
Target Start/End: Complemental strand, 31201139 - 31201034
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  ||||||| |||||| ||||||||||||||  |||||||||||||||| || ||||||| |||| |||||||||||||||||    
T  31201139 tccgttagccatgctgacatgtcgccttgcatgatgtgttgtcttgtatgcgtggcaagaaggaagtcatgtgttcagggacgaatttgattgatttgga 31201040  T
Q  533 aaaagt 538  Q
    ||||||    
T  31201039 aaaagt 31201034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 337 - 417
Target Start/End: Complemental strand, 33160272 - 33160192
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtc 417  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||| |||||||||||||||||    
T  33160272 gagtaaaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtc 33160192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 1320617 - 1320700
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||| |||||||||||||||| ||| ||| |||||  |||||||||||||| |||||||||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccct 1320700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 586 - 705
Target Start/End: Complemental strand, 38882637 - 38882518
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||| ||||||||||  ||||||| ||| |||| ||||||||||||||||| ||| ||||| |||||||||||| ||||| | ||||||||| |||||     
T  38882637 ccctgtattacccatacctccttccccacttttcactcagaaacataaaaaacgtcattgacccttctccttcccactaaagccttctccattttcaccg 38882538  T
Q  686 ctccaaaaccatcaccatct 705  Q
    |||||||| ||||| |||||    
T  38882537 ctccaaaatcatcatcatct 38882518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 586 - 684
Target Start/End: Complemental strand, 462212 - 462114
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacc 684  Q
    |||||| |||||||||  |||||| || || ||| |||||||||||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  462212 ccctgcgttacccatacctccttcttcgcagttcactcagaaacataaagaacgtcattgacccttctccttcccgctaaaactttctccattctcacc 462114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 42897899 - 42897817
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||||||||||||| ||||||| |||||| || ||| ||||||||| |||||||||||||| ||||||||||||||||||    
T  42897899 tgagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtcc 42897817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 335 - 419
Target Start/End: Original strand, 31821416 - 31821500
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccc 419  Q
    |||||||||| ||||||||||||| | |||||||||| || || ||| || ||||||||||||||||||||||||||||||||||    
T  31821416 atgagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccc 31821500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 37526156 - 37526064
Alignment:
Q  328 aaaattaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||| ||||||||||||||||||||||||||| |||||||||  || || ||||||  | | ||||||||||||||||||||||||||||||    
T  37526156 aaaataaatgagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccct 37526064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 337 - 418
Target Start/End: Complemental strand, 462494 - 462413
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||||||||||||||||| || |||||| |||| | |||||||||  ||| ||||||||||||||||||||||||||||    
T  462494 gagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtcc 462413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 447 - 523
Target Start/End: Original strand, 9184525 - 9184601
Alignment:
Q  447 tgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||| |||||| |||||||| ||| ||| ||||||||    
T  9184525 tgatctgtcgccctgcatgatgtgttgtcttgtacatgtgtcaacaaggaatccacgtgtacaaagaccaatttgat 9184601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 9673199 - 9673091
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||| ||  | | ||||||  |||||||| ||||  | |||||||||||||||| |||||||||| ||| |||| |||||||||| |||||||    
T  9673199 gtccctccgtctaaaagcttcgttagtggtgatgatgtgtcttcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggac 9673100  T
Q  515 taatttgat 523  Q
    |||||||||    
T  9673099 taatttgat 9673091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 535
Target Start/End: Original strand, 31821528 - 31821639
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||  || ||||||| || |||||||||| | |||||| ||||||||||||||         |||||||||||||||||||| ||||    
T  31821528 gtccctccgtccaagtcctctgttagccttgctgatctgtcgtcttgcatgatgtgttgtcttgta---------agaaggaagccacgtgttcagggac 31821618  T
Q  515 taatttgattgatttggaaaa 535  Q
    |||||||||||| ||| ||||    
T  31821619 taatttgattgaattgaaaaa 31821639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 332 - 420
Target Start/End: Original strand, 40019151 - 40019239
Alignment:
Q  332 ttaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||| |||||| |||||| || |||||| || ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  40019151 ttaatgagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 40019239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 5036604 - 5036667
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||| |||||    
T  5036604 tgcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 5036667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 31201267 - 31201184
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || |||| | ||||||||| ||| ||||||||| |||| |||||||||||||||||||| ||| |||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccct 31201184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 8609821 - 8609714
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  |||| || |||||| |||||||||||||||||||| | | |||| |||||||||| |||||||    
T  8609821 gtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgtacaaggac 8609723  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  8609722 taaattgat 8609714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 13108370 - 13108263
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | | ||||||  |||||||  |||| || |||||| |||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  13108370 gtccctccgtccaaaagcttcgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 13108272  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  13108271 taaattgat 13108263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 31823568 - 31823484
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||| | |||||| ||||||| | ||||||||| ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  31823568 tgagtggatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 31823484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 38547338 - 38547445
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||  | ||||||||  |||||||  |||| || |||||| |||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  38547338 gtccctccatccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 38547436  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  38547437 taaattgat 38547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 9402865 - 9402940
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||| ||  |||| |||||||||||||||||| |||||||||| ||||||||||||| |||| |||||    
T  9402865 tcatgttaacttctgcccttagggcacatgttaagcattattttcatttcaataatggtaagaatttaataaaaaa 9402940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 25707392 - 25707309
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||| |||||||||||| ||   | |||||||||  |||||||||||||||||||||||||||| |||||    
T  25707392 gagtgaatcatcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccct 25707309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 30069697 - 30069772
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||| ||||| ||||||||||||||||| |||||||| |||||||  ||||||| ||||| ||||    
T  30069697 tcatgttaacttgtgctcttagggcacatgttaagcatttatttcattccattaataataagaatttaatggaaaa 30069772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 38869936 - 38869861
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| |||||||||||| ||||||||||||| ||||||||||| |||| || |||||||    
T  38869936 tcatgttaacttgtgcccttaaggcacatgttaaacattaatttcattccattaatggtatgaatttattgaaaaa 38869861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 420
Target Start/End: Original strand, 32822358 - 32822444
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||| ||||||||| |||||| |  | | |||||||||  ||||||||||||   |||||||||||||||||||    
T  32822358 aatgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccct 32822444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 640 - 705
Target Start/End: Complemental strand, 31200940 - 31200875
Alignment:
Q  640 tccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    ||||||||| ||||| ||||||||||||| ||||||||| ||||| |||||||| ||||| |||||    
T  31200940 tccttgacttttctctttcccgctaaaacgttctccattgtcacccctccaaaatcatcatcatct 31200875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 33748332 - 33748405
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| ||||||| | ||||||||| ||| |||||| || |||| ||||||||||||||||||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaa 33748405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 335 - 420
Target Start/End: Complemental strand, 38882923 - 38882838
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||||||| ||||||||| | | || ||||||  ||| |||| ||||||| ||||||| ||| |||||    
T  38882923 atgagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccct 38882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 7745146 - 7745038
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||  | ||||||||  |||||||| ||||  | |||||| |||||||||||||||||||| ||| |||| || ||  ||| |||||||    
T  7745146 gtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagtcatatgtacaaggac 7745047  T
Q  515 taatttgat 523  Q
    |||||||||    
T  7745046 taatttgat 7745038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 26242348 - 26242240
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  | |||||| ||||  | ||||||||||||||||||||||||||| ||| |||| | ||| |||| |||  ||    
T  26242348 gtccctccgtccaaaagctccgttagtggcgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacaaggcaaccatgtgtacaataac 26242249  T
Q  515 taatttgat 523  Q
    |||||||||    
T  26242248 taatttgat 26242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 362 - 410
Target Start/End: Complemental strand, 32824337 - 32824289
Alignment:
Q  362 aattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  32824337 aattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaa 32824289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 33750469 - 33750425
Alignment:
Q  376 ggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  33750469 ggccaacttcgtccctcaattatgcgaaatatcaacttagtccct 33750425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 461184 - 461259
Alignment:
Q  345 catcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||| ||||||||| ||||||||| ||| |||||||||  ||||||||||||| |||||| ||| ||| |||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccct 461259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 11258033 - 11257958
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| |||||||||||| ||||| |||||||  | ||||||||||||| ||||||||||    
T  11258033 tcatgttaacttgtgcccttagggcacatgttaaacattattttcattcaaataatggtaagaatttaatgaaaaa 11257958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 447 - 506
Target Start/End: Complemental strand, 11722791 - 11722732
Alignment:
Q  447 tgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgt 506  Q
    |||| ||||| | ||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  11722791 tgatatgtcgtcttgcatgttgtgttgtgttgtacacgtgtcaacaaggaagccacgtgt 11722732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 516
Target Start/End: Original strand, 22272444 - 22272547
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    |||||||||| |||||  | ||||||||  |||||||| |||   | |||||||||||||||| |||||| ||| ||| |||| |||||||||| |||||    
T  22272444 tagtccctccatccaaaagctccgttagtggtgatgatgtgttctcttgcatgttgtgttgtcatgtacatgtgtcaacaaggcagccacgtgtacaagg 22272543  T
Q  513 acta 516  Q
    ||||    
T  22272544 acta 22272547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 523
Target Start/End: Complemental strand, 28433702 - 28433643
Alignment:
Q  464 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||| ||||||||||||| || ||||||||||||||| || ||||||| |||||    
T  28433702 tgttgtgttggcttgtacacgtgggaaaaaggaagccacgtgtacatggactaaattgat 28433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 36068459 - 36068408
Alignment:
Q  280 cacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||||||||||||| ||||||| || ||||||||||||| ||||||||||    
T  36068459 cacatgttaagcattattttcattccaataatggtaagaatttaatgaaaaa 36068408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 36660761 - 36660686
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| |||| ||||||| |||||||||| || |||||||||||||||| || |||||||    
T  36660761 tcatgttaacttgtgcccttaaggcatatgttaaccattaatttcgttccattaatggtaagaatttattgaaaaa 36660686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 8072452 - 8072510
Alignment:
Q  273 cttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||||||||||| |||||||  | ||||||||||||| ||||||||||    
T  8072452 cttagggcacatgttaagcattattttcattcaaataatggtaagaatttaatgaaaaa 8072510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 31411025 - 31410975
Alignment:
Q  281 acatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||||||||||||||||||| ||||| |||||||| || |||||||    
T  31411025 acatgttaagcattaatttcatttctttaatagtaagaatttattgaaaaa 31410975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 42941882 - 42941992
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    ||||||||||||||||    ||||||||  | |||||| ||||  | ||||||||||||||||  ||||||||| ||| |||| |||||| ||| |||||    
T  42941882 tagtccctccgtccaaaatctccgttagtggagatgatgtgtcctcttgcatgttgtgttgtcaggtacacgtgtcaacaaggcagccacatgtacaagg 42941981  T
Q  513 actaatttgat 523  Q
    ||||| |||||    
T  42941982 actaaattgat 42941992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 526
Target Start/End: Complemental strand, 15145722 - 15145665
Alignment:
Q  469 tgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattga 526  Q
    |||||||||||||||||| | | ||||||||||| ||| ||||||| |||||||||||    
T  15145722 tgttgtcttgtacacgtgtcgacaaggaagccacatgtacaaggaccaatttgattga 15145665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 414
Target Start/End: Complemental strand, 25373713 - 25373636
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaactta 414  Q
    ||||||| |||||| ||| ||||| |||||||||   | |||||||||  | ||||||||||||||||||||||||||    
T  25373713 gagtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaactta 25373636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 517
Target Start/End: Complemental strand, 40339669 - 40339612
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 517  Q
    |||||||||||||||| ||||||| || ||| |||| |||||||||| ||||||||||    
T  40339669 tgcatgttgtgttgtcatgtacacctgtcaacaaggcagccacgtgtacaaggactaa 40339612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 523
Target Start/End: Complemental strand, 13486105 - 13486025
Alignment:
Q  443 gtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||| ||||  | |||||||||||||| | |||||||||| ||| |||| || ||||||| |||||||||| |||||    
T  13486105 gtgatgatgtgtcctcttgcatgttgtgttgccctgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgat 13486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 31451418 - 31451374
Alignment:
Q  254 gatcatcttaacttgtgttcttatggcacatgttaagcattaatt 298  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||    
T  31451418 gatcatgttaacttgtgctcttagggcacatgttaagcattaatt 31451374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 35507193 - 35507117
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttca-ttaatggtaagaatataatgaaaaa 331  Q
    |||| |||| ||||||  |||| | ||||||||||||||||||||||| || ||||| |||||||| ||||||||||    
T  35507193 tcatgttaatttgtgtctttatagtacatgttaagcattaatttcattccatttaatagtaagaatttaatgaaaaa 35507117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 38881429 - 38881501
Alignment:
Q  338 agtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||| |||||||||||||||| |||||||||   |  ||||||||  ||||||||||||||||||| ||||    
T  38881429 agtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaa 38881501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 41042618 - 41042510
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||| ||||  | |||||| ||||||||| || ||| ||| ||| |||| ||||||| || |||||||    
T  41042618 gtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcctgcacatgtgtcaacaaggcagccacgggtacaaggac 41042519  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  41042518 taaattgat 41042510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 523
Target Start/End: Complemental strand, 41825650 - 41825570
Alignment:
Q  443 gtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||| ||||  | |||||| ||||||||| ||||||| || ||| |||| || ||||||| ||||||||||||||||    
T  41825650 gtgatgatgtgtcttcttgcatgctgtgttgtcctgtacacatgtcaacaaggcagtcacgtgtacaaggactaatttgat 41825570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 5895993 - 5896068
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||   |||| |||| ||||||||||||||||||||| | ||||| |||||||| || |||||||    
T  5895993 tcattttaacttgtacccttagggcatatgttaagcattaatttcattcctttaatagtaagaatttattgaaaaa 5896068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 6164658 - 6164721
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||| ||||| ||||||||||||| ||| ||| || |||||||| ||||||| ||||||||    
T  6164658 tgcatgtcgtgttatcttgtacacgtgtcaataagaaaaccacgtgtacaaggaccaatttgat 6164721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 26014841 - 26014916
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||   |||| ||||||||||||||||||||  |||| ||||||| |||||||| || |||||||    
T  26014841 tcatgttaacttgtacccttagggcacatgttaagcattaatagcattccattaatagtaagaatttattgaaaaa 26014916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 418
Target Start/End: Complemental strand, 34681145 - 34681074
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    |||||||||||||| |||||||| |  | ||||||||| |||||| |||| ||||||||||| | |||||||    
T  34681145 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 42894784 - 42894859
Alignment:
Q  345 catcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||| || ||| || ||||||||| ||| | ||||||| |||||| |||||||||||||||||| ||| |||||    
T  42894784 catcaactttgtctttgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccct 42894859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 6393709 - 6393655
Alignment:
Q  266 ttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||||| |||||| |||||||||| ||||||| |||||  |||||||||||||||    
T  6393709 ttgtgtccttatgacacatgttaaacattaatgtcattcaattaatggtaagaat 6393655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 705
Target Start/End: Original strand, 9184695 - 9184789
Alignment:
Q  611 tcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    ||||||||| |||||| |||| ||| | |||| |||   ||||||||||||||||||| |||  |||  |||||||||||||| ||||| |||||    
T  9184695 tcacatttcactcagacacatcaaatacgtccatgatctttctccttcccgctaaaaccttcatcatcttcacctctccaaaatcatcatcatct 9184789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 348 - 418
Target Start/End: Complemental strand, 13284073 - 13284003
Alignment:
Q  348 caaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||||||||| |||||| | |  | |||||| ||||||||| |||| ||||||||||||| |||||||    
T  13284073 caaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtcc 13284003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 420
Target Start/End: Original strand, 9184381 - 9184466
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||| |||||| ||||||||| ||||| |||   | ||||||||| ||| | ||| || |||||||||||| |||||||||    
T  9184381 atgagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccct 9184466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 13282488 - 13282561
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | ||||||||| |||||| |||| ||||||||||| | |||||||||    
T  13282488 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccct 13282561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 13282588 - 13282660
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggc 488  Q
    ||||||||||||||  | ||||||||  |||||||| |||| || |||||| | ||||||||||||||||||||    
T  13282588 gtccctccgtccaaaagctccgttagtggtgatgatgtgtc-ccttgcatgctctgttgtcttgtacacgtggc 13282660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 27691164 - 27691237
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 27691237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 42943505 - 42943432
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | ||||||||| |||||| |||| ||||||||||| | |||||||||    
T  42943505 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccct 42943432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 4e-93; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 589 - 802
Target Start/End: Original strand, 37417563 - 37417776
Alignment:
Q  589 tgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctc 688  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37417563 tgcattacccatacttcctccctcacatttctctcagaaacatcaaaaacgtccttgactcttctccttcccgctaaaactgtctccattctcacctctc 37417662  T
Q  689 caaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgt 788  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  37417663 caaaaccatcatcatcttcgacgattctcacgtttttgaagttgttgtgttcggctgtggttaaaggtaacacctttcctctaatttatcaagtttttgt 37417762  T
Q  789 gttcgtatttacca 802  Q
    ||||||||||||||    
T  37417763 gttcgtatttacca 37417776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 589 - 802
Target Start/End: Original strand, 42879600 - 42879814
Alignment:
Q  589 tgcattacccatagttccttcctcacatttctctcagaaacataaaaaat-gtccttgactcttctccttcccgctaaaactttctccattctcacctct 687  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||  |||||||||||||||||||||||||||    
T  42879600 tgcattacccatacttccttcctcacatttctctcagaaacataaaaaaacgtccttgactcttctctttcttgctaaaactttctccattctcacctct 42879699  T
Q  688 ccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctg 787  Q
    |||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42879700 ccaaaaccatcatcatcttcaacgattctcacgtttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctg 42879799  T
Q  788 tgttcgtatttacca 802  Q
    |||||||||||||||    
T  42879800 tgttcgtatttacca 42879814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 32656691 - 32656576
Alignment:
Q  22 ccctttttctcaaggaaggttagagaatagagaacggagaatgccgtgtaaaaagaatttcgatgtttagggtttaaggtgttgtgccatcaatgatgga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32656691 ccctttttctcaaggaaggttagagaatagagaacggagaatgccgtggaaaaagaatttcgatgtttagggtttaaggtgttgtgccatcaatgatgga 32656592  T
Q  122 ttttgtcattcttcac 137  Q
    ||||||||||||||||    
T  32656591 ttttgtcattcttcac 32656576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 415 - 541
Target Start/End: Original strand, 37417383 - 37417509
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||| |||||||||| |||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37417383 gtcccttcgtccaagtgctccgttagccatgctgatctgttgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 37417482  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    |||||| ||||||||||||||||||||    
T  37417483 taatttaattgatttggaaaaagtcca 37417509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 586 - 798
Target Start/End: Complemental strand, 39241 - 39034
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| |||||||||    |||| ||||||||| ||||||||| ||||| |||| |||||| |||| ||||||| |||||     
T  39241 ccctgcattacccatacctccttcttcacatttc----agaa-cataaaaaacgtccttgacccttcttcttctcgctaatacttcctccattttcaccc 39147  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||| | ||| |||||| | ||||||||||||  ||||||||| |||| |||||||||||||||||||| |  ||||||||||||     
T  39146 ctccaaaatcatcatcatgtccgacgattctgaaatttttgaagtttgtgtgttcggctgtgattaaaggtaacacctttcctgttgtttatcaagtttt 39047  T
Q  786 tgtgttcgtattt 798  Q
    |||||||||||||    
T  39046 tgtgttcgtattt 39034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 588 - 797
Target Start/End: Original strand, 42001893 - 42002101
Alignment:
Q  588 ctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctct 687  Q
    ||||||||||||||  |||||| |||||||||  |||||||||| |||||  || ||||  |||||||||||||||||||||||| ||||| ||||| ||    
T  42001893 ctgcattacccatacctccttcttcacatttcagtcagaaacatcaaaaacatcattgatccttctccttcccgctaaaactttccccattatcacccct 42001992  T
Q  688 ccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctg 787  Q
    |||||| ||||| ||||| ||  |||| | || |||||||||||  ||||||||| |||| |||||||||||||||||||| |  ||||||||||| | |    
T  42001993 ccaaaa-catcatcatctccggcgattattacgtttttgaagtttctgtgttcggctgtgattaaaggtaacacctttcctgttgtttatcaagttcccg 42002091  T
Q  788 tgttcgtatt 797  Q
    ||||||||||    
T  42002092 tgttcgtatt 42002101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 415 - 538
Target Start/End: Original strand, 25619770 - 25619893
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||||| |||||||||| || ||||||||||| |||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||    
T  25619770 gtccctccatccaagtgctccgttagccatgttgatctgtcgctctgcatgttgcgttgtcttatacacgtggcaagaaagaagccacatgttcaaggac 25619869  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    |||||||||||| ||| |||||||    
T  25619870 taatttgattgaattgaaaaaagt 25619893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 29909674 - 29909551
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||||| || |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||    
T  29909674 gtccctccgtccaagtgctctgttagccatgttgatctgtcgcgttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttaagggac 29909575  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    |||||||||||| || ||||||||    
T  29909574 taatttgattgaatttgaaaaagt 29909551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 632 - 797
Target Start/End: Complemental strand, 92149 - 91984
Alignment:
Q  632 aaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttgaagtt 731  Q
    |||||| ||||||||| ||||| |||| |||||| |||| ||||||| ||||| |||||||| ||||| ||||| ||| |||||| ||||||||||||||    
T  92149 aaaaaacgtccttgacccttcttcttctcgctaatacttcctccattttcacccctccaaaatcatcatcatctccgacgattctgacatttttgaagtt 92050  T
Q  732 gttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
      ||||||||| |||| ||||||||||||||||| || |  |||||||||||| ||||||||||||    
T  92049 tgtgtgttcggctgtgattaaaggtaacaccttttctgttgtttatcaagtttttgtgttcgtatt 91984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 39411 - 39291
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||| |||||||||||||||||||||| || |||| ||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  39411 gtccccccgtccaagtgttccgttagccatgctgatatgtcgtcttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggac 39312  T
Q  515 taatttgattgatttggaaaa 535  Q
     ||||||||||| ||||||||    
T  39311 aaatttgattgaattggaaaa 39291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 15432475 - 15432561
Alignment:
Q  452 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  15432475 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagtcatgtgttcaaggactaatttgattgaattggaaaaagt 15432561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 424 - 536
Target Start/End: Original strand, 42001728 - 42001840
Alignment:
Q  424 tccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||| | |||||||| || |||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  42001728 tccaagtgcttcgttagccatgttgatgtgtcgccctgcatgttgagttgtcttgtacacgtgacaagaaggaagtcacgtgttcaaggactgatttgat 42001827  T
Q  524 tgatttggaaaaa 536  Q
    ||| |||||||||    
T  42001828 tgaattggaaaaa 42001840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 589 - 797
Target Start/End: Complemental strand, 29909502 - 29909299
Alignment:
Q  589 tgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctc 688  Q
    |||||||||||||  |||||| |||||||||    |||| ||| ||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||| |||    
T  29909502 tgcattacccatacctccttcttcacatttc----agaa-catcaaaaacgtccttgacccttcttcttcccgctaaaacttcctccattttcacccctc 29909408  T
Q  689 caaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgt 788  Q
    |||||  |||| ||||| ||  |||||| || |||||||||||  ||||||||  |||| |||||||||||  ||||||| |  ||||||||||||||||    
T  29909407 caaaattatcatcatctccggtgattctgacgtttttgaagtttgtgtgttcgactgtgattaaaggtaacgtctttcctgttgtttatcaagtttctgt 29909308  T
Q  789 gttcgtatt 797  Q
    |||||||||    
T  29909307 gttcgtatt 29909299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 92361 - 92241
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||| ||||||||| |||||||||| || |||| ||||| | |||||| |||||||||||||||  |||||||||||||||||||||||||| ||||    
T  92361 gtccctcagtccaagtgctccgttagccatgctgatatgtcgtcttgcatgctgtgttgtcttgtacgtgtggcaagaaggaagccacgtgttcagggac 92262  T
Q  515 taatttgattgatttggaaaa 535  Q
     ||||||||||| ||||||||    
T  92261 aaatttgattgaattggaaaa 92241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 15372646 - 15372732
Alignment:
Q  452 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  15372646 tgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttggaaaaagt 15372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 415 - 509
Target Start/End: Original strand, 42879465 - 42879559
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttca 509  Q
    |||||||||||||||||||||||||| | || |||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  42879465 gtccctccgtccaagtgttccgttagtcatgctgatatgtcgccctgcatgctgtgttgtcttgtacacgtgacaagaaggaagtcacgtgttca 42879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 586 - 690
Target Start/End: Original strand, 25619945 - 25620049
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||  || ||||||||||||||||||||||     
T  25619945 ccctgcattacccatacctccttcttcacatttcactcagaaacataaaaaacgtccttgacccttctccttttcgataaaactttctccattctcaccc 25620044  T
Q  686 ctcca 690  Q
    |||||    
T  25620045 ctcca 25620049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 604 - 705
Target Start/End: Original strand, 39823 - 39924
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| ||||||||   |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||    
T  39823 tccttcttcacattttagtcagaaacatcaaaaacatccttgactcttctccttcccgctaaaactttctccattctcacccctccaaaatcatcatcat 39922  T
Q  704 ct 705  Q
    ||    
T  39923 ct 39924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 433 - 538
Target Start/End: Original strand, 41706667 - 41706772
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  ||||||| |||||| |||| |||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  41706667 tccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagtcacgtgttcagggacgaatttgattgatttgga 41706766  T
Q  533 aaaagt 538  Q
    ||||||    
T  41706767 aaaagt 41706772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 37417273 - 37417356
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||| |||||||||| ||||||||  ||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccct 37417356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 14389118 - 14389010
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  ||| ||||||  |||||||| ||||  | ||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  14389118 gtccctccgtccaaaagtttcgttagtagtgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggac 14389019  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  14389018 taacttgat 14389010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 334 - 410
Target Start/End: Original strand, 42001607 - 42001683
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||||||||||||||||||||||| |||||| || ||||| |||||||| |||||| |||||||||||||||||    
T  42001607 aatgagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaa 42001683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 29909784 - 29909701
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||| |||| | |||||||||  || |||||| |||||||||||||||||||||||||||| |||||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtccct 29909701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 335 - 420
Target Start/End: Complemental strand, 41235 - 41150
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||| |||||| ||||||| | ||||||||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||    
T  41235 atgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 41150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 14776453 - 14776376
Alignment:
Q  254 gatcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||| ||||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  14776453 gatcatgttaacttgtgtccttaggacacatgttaaacattaatttcatttcattaatggtaagaatttgatgaaaaa 14776376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 604 - 705
Target Start/End: Original strand, 15372799 - 15372900
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| ||||||||  ||||||||||| |||||  || |||||||||||||||||||||||||| ||||||||| ||| | |||||||| ||||| |||    
T  15372799 tccttcttcacattttactcagaaacatcaaaaacatcattgactcttctccttcccgctaaaacgttctccattgtcaaccctccaaaatcatcatcat 15372898  T
Q  704 ct 705  Q
    ||    
T  15372899 ct 15372900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 10716872 - 10716809
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||    
T  10716872 tgcatgttgtgttgtcttgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgat 10716809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 420
Target Start/End: Original strand, 25619661 - 25619743
Alignment:
Q  338 agtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||||| |||||| |  ||| || ||||||  |||||||||||||| |||||||||||||||||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccct 25619743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 605 - 758
Target Start/End: Original strand, 15432626 - 15432779
Alignment:
Q  605 ccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatc 704  Q
    ||||| |||||||||  |||||||||| |||||  || ||| |  | |||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||    
T  15432626 ccttcttcacatttcagtcagaaacatcaaaaacatctttggccttcctccttcccgctcaaactttcaccattctcacccctccaaaatcatcatcatc 15432725  T
Q  705 ttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaa 758  Q
      ||  |||||| || |||||||||||  ||||||||| |||  ||||||||||    
T  15432726 accggcgattctgacgtttttgaagtttctgtgttcggctgtaattaaaggtaa 15432779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 640 - 705
Target Start/End: Original strand, 41706866 - 41706931
Alignment:
Q  640 tccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||    
T  41706866 tccttgactcttctccttcccgctaaaacgttctccattgtcacccctccaaaatcatcatcatct 41706931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 39521 - 39438
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||| ||||   |||||||||  ||  ||||| ||||| ||||||||||||||||||||||||||||||||    
T  39521 gagtgaaccatcaaatttgtccccgaattttcacgcgtcagccaactttgtacctcaattatgcgaaatatcaacttagtccct 39438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 11021533 - 11021616
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||| | ||||||||| ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  11021533 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 11021616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 28248269 - 28248183
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||| |||||| ||||||| | |||||| || ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  28248269 aatgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 28248183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 32227611 - 32227541
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||| | ||| |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  32227611 ttaatttgtgcttttagggcacatgttaagcattaatttcattccattaatggtaataatttaatgaaaaa 32227541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 40560331 - 40560441
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    ||||||||||||||||  |||| |||||  |||||||| ||||  | |||||| ||||||||| ||||| |||| ||| |||| |||||||||| |||||    
T  40560331 tagtccctccgtccaaaagttctgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcatgtacgcgtgtcaacaaggcagccacgtgtacaagg 40560430  T
Q  513 actaatttgat 523  Q
    ||||| |||||    
T  40560431 actaaattgat 40560441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 523
Target Start/End: Complemental strand, 11315324 - 11315263
Alignment:
Q  462 catgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||| ||||||||    
T  11315324 catgttgtgttgtcttgtacacgtgtcaacaaggaagccacatgtacaaggaccaatttgat 11315263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 420
Target Start/End: Original strand, 15372497 - 15372582
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||| || |||| | ||||||||| ||| ||||||||| | ||||||||||||| ||||||||| ||| |||||    
T  15372497 atgagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccct 15372582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 17696320 - 17696424
Alignment:
Q  419 ctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaat 518  Q
    ||||||||||  | ||||||||  |||||||| ||||  | |||||||||||||||| |||||||||| ||| |||| ||||| |||| ||||||||||     
T  17696320 ctccgtccaaaagctccgttagtggtgatgatgtgtcatcttgcatgttgtgttgtcctgtacacgtgtcaacaaggcagccatgtgtacaaggactaaa 17696419  T
Q  519 ttgat 523  Q
    |||||    
T  17696420 ttgat 17696424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 19908280 - 19908172
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||  | |||||| ||||||||| |||||||||| ||| |||  |||||||||| |||||||    
T  19908280 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggac 19908181  T
Q  515 taatttgat 523  Q
    |||||||||    
T  19908180 taatttgat 19908172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 39664782 - 39664674
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||| ||||  | |||  | ||||||||| |||||||||| ||| |||| |||||||||| |||||||    
T  39664782 gtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgctagctgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggac 39664683  T
Q  515 taatttgat 523  Q
    |||||||||    
T  39664682 taatttgat 39664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 341 - 417
Target Start/End: Original strand, 42879360 - 42879435
Alignment:
Q  341 gaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtc 417  Q
    ||||||||||||||||||||||||||| || ||| || ||||||  ||||| |||||||||||| ||||||||||||    
T  42879360 gaaccatcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattatgcgaaa-atcaacttagtc 42879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 44709779 - 44709671
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | | ||||||  |||||||| ||||  | ||||||||||||||||||||||||||| ||| |||  | |||||||| |||||||    
T  44709779 gtccctccgtccaaaagcttcgttagtggtgatgatatgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacaagacatccacgtgtacaaggac 44709680  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  44709679 taaattgat 44709671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 341 - 420
Target Start/End: Original strand, 39560 - 39639
Alignment:
Q  341 gaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||| || |||| | |||||| || ||| ||||||||| ||||||||||||||||||||||||| ||| |||||    
T  39560 gaaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 39639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 6797662 - 6797725
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||| |||||||||||||||||||| ||| |||| |||||||||| |||||||||| |||||    
T  6797662 tgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 6797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 16763230 - 16763293
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||| |||||||||||||||| ||| |||| |||||||||| |||||||||| |||||    
T  16763230 tgcatgttgttttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 16763293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 35310373 - 35310299
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||| |||| ||||||||| ||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  35310373 tcatgttaacttgtgtccttagggcacatgtgaagcattaatttcatgtcactaatggtaaaaat-taatgaaaaa 35310299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 41706539 - 41706622
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || || | | ||||||||| ||| || |||||| ||||||||||||||||||||||||| ||| |||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccct 41706622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 15373980 - 15373906
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||| |||||| || |||| | |||| |||||||| ||||||||| || ||||||||||||||||||||||    
T  15373980 tgagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaa 15373906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 40534393 - 40534323
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||||||| ||||| |||||||||||| ||||||||||||  ||||||| |||||||| ||||| ||||    
T  40534393 ttaacttgtgctcttagggcacatgttaaacattaatttcataccattaatagtaagaatttaatggaaaa 40534323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 417
Target Start/End: Original strand, 15432328 - 15432408
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtc 417  Q
    |||||||||||||||||  ||||| |||||| |  ||| || ||||||  |||||||||||||||||||||||| ||||||    
T  15432328 gagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtc 15432408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 608 - 707
Target Start/End: Original strand, 20941031 - 20941130
Alignment:
Q  608 tcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttc 707  Q
    |||||||||||| |||||| |||| ||| | |||  |||||||||||||| |||||||||| ||| | |   ||| |||||||||| |||||||||||||    
T  20941031 tcctcacatttcactcagacacatcaaacaagtctctgactcttctcctttccgctaaaaccttcacaaacttcatctctccaaaatcatcaccatcttc 20941130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 40097703 - 40097766
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||| |||||||||| || ||||| ||| ||||||||||||||| |||| |||||||||||    
T  40097703 tgcatgtcgtgttgtcttatatacgtgtcaacaaggaagccacgtgtacaagaactaatttgat 40097766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 41708521 - 41708438
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| || |||  | |||| |||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||    
T  41708521 gagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 41708438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 538
Target Start/End: Original strand, 39723 - 39757
Alignment:
Q  504 tgttcaaggactaatttgattgatttggaaaaagt 538  Q
    |||||||||||||||||||||||||||||||||||    
T  39723 tgttcaaggactaatttgattgatttggaaaaagt 39757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 17946246 - 17946312
Alignment:
Q  457 ccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||| ||||||||||||| ||||||| || ||| ||||||| ||||||| |||||||||| |||||    
T  17946246 ccctgtatgttgtgttgtcatgtacacatgtcaaaaaggaagtcacgtgtacaaggactaaattgat 17946312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 41766465 - 41766403
Alignment:
Q  254 gatcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaa 316  Q
    |||||| ||||||||||  || ||| |||||||||| |||||||||||||| |||||||||||    
T  41766465 gatcatgttaacttgtgccctcatgacacatgttaaacattaatttcatttaattaatggtaa 41766403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 526
Target Start/End: Complemental strand, 862272 - 862215
Alignment:
Q  469 tgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattga 526  Q
    |||||||||||||||||| | | |||||||||| |||| ||||||| |||||||||||    
T  862272 tgttgtcttgtacacgtgtctacaaggaagccatgtgtacaaggaccaatttgattga 862215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 41465380 - 41465457
Alignment:
Q  254 gatcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||| ||||||||||| |||| |||| ||||||| ||||||| ||||  ||| |||||||||||| || |||||||    
T  41465380 gatcatgttaacttgtgtccttagggcagatgttaatcattaatgtcataccatcaatggtaagaatttattgaaaaa 41465457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 42880902 - 42880829
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| ||||||| | |||||| || ||| || |||||| |||||| ||||||||||||||||||    
T  42880902 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaa 42880829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 7744201 - 7744261
Alignment:
Q  463 atgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||| ||||||| || ||| ||||||||||||||| ||| |||||| |||||    
T  7744201 atgttgtgttgtcatgtacacatgtcaaaaaggaagccacgtgtacaatgactaaattgat 7744261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 10500487 - 10500423
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||| ||||||||||   ||| |||||||||||||||||||| | ||| ||||||||||||||||    
T  10500487 tcatgttaacttgtgccgttaaggcacatgttaagcattaatgtaattccattaatggtaagaat 10500423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 261 - 325
Target Start/End: Complemental strand, 43305668 - 43305604
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataat 325  Q
    ||||||| || ||| | |||| ||||||||||||||||||||| |||||||||||| ||| ||||    
T  43305668 ttaacttctgctctaagggcatatgttaagcattaatttcattccattaatggtaataatttaat 43305604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 418
Target Start/End: Original strand, 19581424 - 19581495
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||||||||||||||||| | |  |  ||||||||||||||| |||| ||||||||||| | |||||||    
T  19581424 tcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcc 19581495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 35327772 - 35327822
Alignment:
Q  281 acatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||| |||||||||||||||||||||  ||||||| ||||| ||||    
T  35327772 acatgttaaacattaatttcatttcattaatattaagaatttaatggaaaa 35327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 14389218 - 14389145
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||| || |||||||| |  | ||||||||| |||||| |||| ||||||||||| | |||||||||    
T  14389218 tcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccct 14389145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 16764690 - 16764617
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  16764690 tcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 16764617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 27414047 - 27414108
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaag 317  Q
    |||| ||||||||||  |||| ||||||||||||||||||| ||| |  |||||||||||||    
T  27414047 tcatgttaacttgtgcccttagggcacatgttaagcattaaattcttgccattaatggtaag 27414108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 3e-87; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 586 - 802
Target Start/End: Original strand, 23774433 - 23774645
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23774433 ccctgcattacccata----cttccccacatttctctcagaaacataaaaaacgtccttgactcttctccttcccgctaaaactttctccattctcacct 23774528  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||||||||| ||||||||| ||||||||  || ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  23774529 ctccaaaaccatcatcatcttcgacgattctcatgttcttgaagttgttgtgttcggctgtggttaaaggtaacacatttcctctaatttatcaagtttc 23774628  T
Q  786 tgtgttcgtatttacca 802  Q
    |||||||||||||||||    
T  23774629 tgtgttcgtatttacca 23774645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 586 - 802
Target Start/End: Original strand, 48634163 - 48634376
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    |||||||||| || || |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48634163 ccctgcattatccttacttccttcctcacatttctctcaaaaacatcaaaaacgtccttgactcttctccttcccgctaaaactttctccattctcacct 48634262  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    ||||||||||||   ||||| ||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  48634263 ctccaaaaccat---catctccgacgattcgcacgtttttgaagttgttgtgttcggctgtggttaaaggtaacacctttcctctaatttatcaagtttt 48634359  T
Q  786 tgtgttcgtatttacca 802  Q
    |||||||||||||||||    
T  48634360 tgtgttcgtatttacca 48634376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 592 - 797
Target Start/End: Complemental strand, 33113022 - 33112817
Alignment:
Q  592 attacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaa 691  Q
    ||||||||||  |||||||||||||||| |||| |||||||||||| |||  |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  33113022 attacccatacctccttcctcacatttcactcataaacataaaaaacgtctctgacccttctcattcccgctaaaactttctccattctcacctctccaa 33112923  T
Q  692 aaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgtt 791  Q
    || ||||| ||||| |   ||||||||| |||||||||||  ||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  33112922 aatcatcatcatctccagcgattctcacgtttttgaagtttctgtgttcgactgtggttaaaggtaacacctttcctctagtttatcaagtttctgtgtt 33112823  T
Q  792 cgtatt 797  Q
    ||||||    
T  33112822 cgtatt 33112817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 18430285 - 18430159
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||  ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  18430285 gtccctccgtccaagtgctccgttagccatggtgacatgtcgccctgcatgccgtgttgtcttgtacacgtggcaagaaggaaaccacgtgttcaaggac 18430186  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    |||||||||||| ||||||||||||||    
T  18430185 taatttgattgaattggaaaaagtcca 18430159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 33852684 - 33852558
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||| ||||||||| |||||||||| || |||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33852684 gtccctctgtccaagtgctccgttagccatggtgacatgtcgccctgcatgttgtgttgtcttgtagacgtggcaagaaggaagccacgtgttcaaggac 33852585  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    |||||||||||| ||||||||| ||||    
T  33852584 taatttgattgaattggaaaaaatcca 33852558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 45257234 - 45257108
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||| | || |||  || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45257234 gtccctccgtccaagtgctccgttagtcatgctgacatgccgccctgcatgttgtgttgtcttgtacacgtggcaagaatgaagccacgtgttcaaggac 45257135  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    |||||||||||| ||||||||||||||    
T  45257134 taatttgattgaattggaaaaagtcca 45257108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 422 - 541
Target Start/End: Original strand, 23774268 - 23774387
Alignment:
Q  422 cgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttg 521  Q
    |||| ||||| || ||||||| || ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  23774268 cgtctaagtgctctgttagccatgttgatctgtcgccctgcatgatgtgttgtcttgtacacgtggcaataaggaagccacgtgttcaaggactaattcg 23774367  T
Q  522 attgatttggaaaaagtcca 541  Q
    ||||||||||||||||||||    
T  23774368 attgatttggaaaaagtcca 23774387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 45898220 - 45898014
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| |||||||||    |||| ||| ||||| ||||||||| ||||| |||| ||||||||||| ||||||| |||||     
T  45898220 ccctgcattacccatacctccttcttcacatttc----agaa-catcaaaaacgtccttgacccttcttcttctcgctaaaacttcctccattttcaccc 45898126  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||  |||||| ||||||||||||||  |||||||||||||| ||||||||||||| |||||| |  ||||||||||||     
T  45898125 ctccaaaaacatcatcatctccggcgattctgacatttttgaagtttgtgtgttcggttgtgattaaaggtaacacatttcctgttgtttatcaagtttt 45898026  T
Q  786 tgtgttcgtatt 797  Q
    ||||||||||||    
T  45898025 tgtgttcgtatt 45898014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 604 - 797
Target Start/End: Complemental strand, 31887276 - 31887083
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||||||||||||| |||| ||| || ||||| ||| ||||   |||||||||||||||||||||||||||||| |||||||  |||| ||||  |||    
T  31887276 tccttcctcacatttcactcaaaaatatcaaaaacgtcattgaacattctccttcccgctaaaactttctccattcccacctctataaaatcatcgtcat 31887177  T
Q  704 cttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
    || ||  ||||||| |  ||||||||||  ||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  31887176 ctccggcgattctcgcggttttgaagtttctgtgttcggctgtggctaaaggtaacacctttcctctagtttatcaagtttatgtgttcgtatt 31887083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 24382907 - 24382784
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||  |||||||||| || |||| |||||||||||||||||||||||||| || ||| ||||| |||||||||||||||||||||||    
T  24382907 gtccctccgtccaagtcatccgttagccatgctgatatgtcgccctgcatgttgtgttgtcttatatacggggcaaaaaggaagccacgtgttcaaggac 24382808  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    |||||||||||| |||||||||||    
T  24382807 taatttgattgaattggaaaaagt 24382784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 415 - 536
Target Start/End: Original strand, 48633987 - 48634112
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgt----cttgtacacgtggcaagaaggaagccacgtgttcaa 510  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||    |||||||||||||||| |||||||||||||||||||    
T  48633987 gtccctccgtccaagtgctccgttagccatgttgatctgtcgccctgcatgatgtgttgtttgtcttgtacacgtggcaaaaaggaagccacgtgttcaa 48634086  T
Q  511 ggactaatttgattgatttggaaaaa 536  Q
    |||||||||||||||| ||| |||||    
T  48634087 ggactaatttgattgaattgaaaaaa 48634112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 586 - 731
Target Start/End: Complemental strand, 24382733 - 24382588
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| ||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||||| |||||     
T  24382733 ccctgcattacccatacctccttcttcacatttcactcagaaacataaaaaacgtcattgtctcttctccttcccgctaaaacattctccattttcaccc 24382634  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagtt 731  Q
    || ||||| ||||| ||||| ||| ||||||||| ||||| |||||    
T  24382633 cttcaaaatcatcatcatctccgacgattctcacgtttttaaagtt 24382588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 23888786 - 23888666
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||||||||| |  |||||||||| || |||||||||||| |||||  ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  23888786 gtccctccgtccaaatcctccgttagccttgctgatctgtcgccttgcatactgtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggac 23888687  T
Q  515 taatttgattgatttggaaaa 535  Q
    |||||||||||| ||||||||    
T  23888686 taatttgattgaattggaaaa 23888666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 31887466 - 31887358
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||  |||||||||||    
T  31887466 gtccctccgtccaagtgctccgttagccatgctgatttgtcgccttgcatgctgtgttgtcttgtacacgtggcaaaaaggaagccatatgttcaaggac 31887367  T
Q  515 taatttgat 523  Q
    |||||||||    
T  31887366 taatttgat 31887358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 33113194 - 33113069
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||| ||||| |||||||||| ||  |||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||||||||||    
T  33113194 gtccctccgtc-aagtgatccgttagccatgccgatctgtcgcccagcatgttgcgctgtcttgtacacgtggcaaaaaggaagccacgtgttcaaggac 33113096  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    ||||||||| ||  |||||||| ||||    
T  33113095 taatttgatggaagtggaaaaattcca 33113069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 415 - 522
Target Start/End: Original strand, 1845894 - 1846001
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| ||||||| || || |||| |||||||||||||| |||| |||| | |||||||||||| |||||||||||||||||||||||    
T  1845894 gtccctccgtccaagtgctccgttaaccatgttgatatgtcgccctgcatgatgtgatgtcctatacacgtggcaaaaaggaagccacgtgttcaaggac 1845993  T
Q  515 taatttga 522  Q
    ||||||||    
T  1845994 taatttga 1846001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 18430119 - 18429908
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  || ||| |||||||||  |||||| ||| |||||  ||||||||  ||| | || ||||||||||||||||||||||||||     
T  18430119 ccctgcattacccatacctcattcttcacatttcagtcagaagcatcaaaaacatccttgacctttcacatttccgctaaaactttctccattctcaccc 18430020  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||  ||  |||| | || |||||||||||  ||||||||| |||| ||||||||||||||||||   |  ||||||||| |||    
T  18430019 ctccaaaatcatcatcatcaccggcgattttgacgtttttgaagtttctgtgttcggctgtgattaaaggtaacacctttcaaattgtttatcaagattc 18429920  T
Q  786 tgtgttcgtatt 797  Q
    | ||||||||||    
T  18429919 tatgttcgtatt 18429908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 588 - 797
Target Start/End: Complemental strand, 33852518 - 33852313
Alignment:
Q  588 ctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctct 687  Q
    ||||||||||||||  ||||||   |||||||  ||||||||||||||||  ||||||||| ||| |||| |||||||||||||||||||||||||| ||    
T  33852518 ctgcattacccatacctccttc---acatttcagtcagaaacataaaaaacatccttgacttttcacctttccgctaaaactttctccattctcacccct 33852422  T
Q  688 ccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctg 787  Q
    |||||| ||||| ||||  ||  |||||| || |||||||||||  |||||| || |||| ||||||||||| ||||||   |  ||||||||| || ||    
T  33852421 ccaaaatcatcatcatcaccggcgattctgacgtttttgaagtttctgtgtt-ggctgtgattaaaggtaacgcctttcaggttgtttatcaagattttg 33852323  T
Q  788 tgttcgtatt 797  Q
    ||||||||||    
T  33852322 tgttcgtatt 33852313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 586 - 705
Target Start/End: Complemental strand, 2977172 - 2977053
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||| ||||| ||||  |||||||||||||||| ||||||||||| |||||||| | |||| ||||| |||||||| ||||| ||||||||||||||||    
T  2977172 ccctgtattactcatacctccttcctcacatttcactcagaaacatcaaaaatgttcgtgacccttcttcttcccgcaaaaaccttctccattctcacct 2977073  T
Q  686 ctccaaaaccatcaccatct 705  Q
    |||||||| ||||| |||||    
T  2977072 ctccaaaatcatcatcatct 2977053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 627 - 765
Target Start/End: Complemental strand, 23888580 - 23888442
Alignment:
Q  627 aacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttg 726  Q
    ||||| ||||| | ||||||| ||||| |||| ||||||||||| ||||||| ||||| |||||||| ||||| ||||| ||| |||||| ||||||||     
T  23888580 aacatcaaaaacgaccttgacccttcttcttctcgctaaaacttcctccattttcacccctccaaaatcatcatcatctccgacgattctgacatttttt 23888481  T
Q  727 aagttgttgtgttcggttgtggttaaaggtaacaccttt 765  Q
    |||||  |||||||||||||| ||||||||||| |||||    
T  23888480 aagtttgtgtgttcggttgtgattaaaggtaacgccttt 23888442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 336 - 414
Target Start/End: Complemental strand, 40509036 - 40508958
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaactta 414  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  40509036 tgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaactta 40508958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 606 - 792
Target Start/End: Complemental strand, 41020825 - 41020639
Alignment:
Q  606 cttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    |||| ||||||||  ||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||    
T  41020825 cttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcacccctccaaaatcatcatcatct 41020726  T
Q  706 tcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttc 792  Q
     |   ||||||  | | |||||||||  ||||||||   ||| | ||||||||||||||||||    ||||||||| ||||||||||    
T  41020725 ccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacctttccttgtgtttatcaagattctgtgttc 41020639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 23774151 - 23774235
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||| ||||||||||||||||||||||||| |||||||||    
T  23774151 tgagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccct 23774235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 48633876 - 48633960
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||||||| ||||||||| ||| || |||||| |||| ||||||||||||||||||||||||||||||    
T  48633876 tgagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccct 48633960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 415 - 486
Target Start/End: Complemental strand, 40508925 - 40508854
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtg 486  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  40508925 gtccctccgtccaagtgttccgttagtcgtgctgatctgtcgccctgcatgttgtgttgtcatgtacacgtg 40508854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 433 - 538
Target Start/End: Complemental strand, 41020999 - 41020894
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  |||||||  ||||| |||| |||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  41020999 tccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 41020900  T
Q  533 aaaagt 538  Q
    ||||||    
T  41020899 aaaagt 41020894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 2977343 - 2977235
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||| |||| ||||||| |||||||||  || |||| |||||||||||||| | ||||||||  ||||||||||||||||||| |||| |||||||||||    
T  2977343 gtccatccgcccaagtgctccgttagcgatgctgatttgtcgccctgcatgctatgttgtctaatacacgtggcaagaaggaaaccacatgttcaaggac 2977244  T
Q  515 taatttgat 523  Q
    |||||||||    
T  2977243 taatttgat 2977235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 972590 - 972515
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  972590 tcatgttaacttgtgcttttagggcacatgttaagcattaatttcatttcattaatggtaagaatttaatgaaaaa 972515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 18430395 - 18430312
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||||| |||||| || |||  ||||||||  ||||||||||||||||||||||||||||||||||    
T  18430395 gagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccct 18430312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 23888896 - 23888813
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||| | |||||||||| || |||||| || |||||||||||||||||||||||| ||||||||||    
T  23888896 gagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccct 23888813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 28963358 - 28963433
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  28963358 tcatgttaacttgtgttcttagggcacatgtttagcattaatttcattccattaatggtaagaatttaatgaaaaa 28963433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 45898473 - 45898391
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||||||||||||||||||| | |||||||||| || | |||| ||||||||| ||||||||||||||||||||||||||    
T  45898473 tgagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtcc 45898391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 452 - 538
Target Start/End: Complemental strand, 51454223 - 51454137
Alignment:
Q  452 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||| | ||| |||||||    
T  51454223 tgtccccctgcatgatgtgttgtcttatacacgtggcaagaaggaggccacgtgttcaaggactaattagattaaattgaaaaaagt 51454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 33113305 - 33113221
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||| |||||| |||||| || ||| ||||||| |  ||||||||||||||||||||||||||||||||||    
T  33113305 tgagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccct 33113221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 413 - 523
Target Start/End: Complemental strand, 23293206 - 23293096
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    ||||||||||||||||  | ||||||||  |||||||| ||||  | |||||||||||||||| |||||||||| ||| |||| |||||||||| |||||    
T  23293206 tagtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaagg 23293107  T
Q  513 actaatttgat 523  Q
    ||||| |||||    
T  23293106 actaaattgat 23293096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 330 - 416
Target Start/End: Complemental strand, 45257351 - 45257265
Alignment:
Q  330 aattaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagt 416  Q
    |||||| |||||||||||||||||||| ||| ||||||||| ||| |||||||||  |||||||||||||  |||||||||||||||    
T  45257351 aattaaagagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagt 45257265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 37238762 - 37238838
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaat 332  Q
    |||| ||||||||||  |||| |||||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  37238762 tcatgttaacttgtgcccttagggcacatgttaagcattaatttcattccattaatggtaataatttaatgaaaaat 37238838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 337 - 417
Target Start/End: Complemental strand, 51454374 - 51454294
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtc 417  Q
    |||||||||||||||||||||||| ||||||||| | | |||||||||  | |||||||||||||||||||||| ||||||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtc 51454294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 53190793 - 53190686
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  |||| || ||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  53190793 gtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 53190695  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  53190694 taaattgat 53190686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 31887576 - 31887493
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||||| ||||||||| | | || ||||||   || ||||||||||||||||||||||||||||||    
T  31887576 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccct 31887493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 420
Target Start/End: Complemental strand, 1847743 - 1847653
Alignment:
Q  330 aattaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||| |||||||| ||||||||| |||||| ||||||||| ||| |||||||||  |||||||||||||| ||||||||| ||| |||||    
T  1847743 aattattgagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccct 1847653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 24383018 - 24382936
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    |||||||||||||||||| |||||| |||||| || ||| |||||||||  ||| ||||||||| ||||||||||||||||||    
T  24383018 tgagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtcc 24382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 800
Target Start/End: Complemental strand, 45256999 - 45256854
Alignment:
Q  654 ccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaa 753  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||| | ||   |  |||||| || |||||||||||  | ||||||| |||| |||||    
T  45256999 cctttccgctaaaactttctccattctcacccctccaaaatcatcatc-tcactggcgattctgacgtttttgaagtttctatgttcggctgtgattaaa 45256901  T
Q  754 ggtaacacctttcctctaatttatcaagtttctgtgttcgtatttac 800  Q
    |||||| ||||||   |  ||||||||| ||||||||||||||||||    
T  45256900 ggtaacgcctttcagattgtttatcaagattctgtgttcgtatttac 45256854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 41021127 - 41021054
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||||||||||||||| | |||||||||  || ||||||||| |||||||||||||||||||| ||||    
T  41021127 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 41021054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 7884907 - 7884800
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  ||||||||||  |||||||  |||| || ||||||||||||||||||||||||||| ||| |||| |||||| |||  ||||||    
T  7884907 gtccctccgtccaaaagttccgttagtggtgatgacatgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacatgtataaggac 7884809  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  7884808 taaattgat 7884800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 27899115 - 27899007
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||  | |||||||||||||||| |||||||||| ||| |||| ||||| |||| |||||||    
T  27899115 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccatgtgtacaaggac 27899016  T
Q  515 taatttgat 523  Q
    |||||||||    
T  27899015 taatttgat 27899007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 42279617 - 42279725
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  |||||||| ||||  | |||||||||||||||||| |||||||| ||| |||| || ||||||| |||||||    
T  42279617 gtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcttatacacgtgtcaacaaggcagacacgtgtacaaggac 42279716  T
Q  515 taatttgat 523  Q
    |||||||||    
T  42279717 taatttgat 42279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 48830840 - 48830732
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  |||||||| ||||  | |||||||||||||||| |||||||||| ||| |||| | |||||||| |||||||    
T  48830840 gtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcaaccacgtgtacaaggac 48830741  T
Q  515 taatttgat 523  Q
    |||||||||    
T  48830740 taatttgat 48830732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 51684720 - 51684828
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||| ||||  | ||| |||||||||||| |||||||||| ||| |||| || ||||||| |||||||    
T  51684720 gtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcgtgttgtgttgtcctgtacacgtgtcaacaaggcagacacgtgtacaaggac 51684819  T
Q  515 taatttgat 523  Q
    |||||||||    
T  51684820 taatttgat 51684828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 52915452 - 52915516
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||| |||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  52915452 tcatgttaacttgtgctcttatgacacatgttaagcattaatgtcatttcattagtggtaagaat 52915516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 13863585 - 13863660
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| | |||||||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  13863585 tcatgttaacttgtgcccttaggacacatgttaagcattaatttcatttcattaatagtaagaatttaatggaaaa 13863660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 45897050 - 45897133
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||||| |||||| || ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  45897050 gagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 45897133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 30600052 - 30599979
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||| |||  | |||||||||||||||| |||| ||||||||||| | |||||||||    
T  30600052 tcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccct 30599979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 12568619 - 12568683
Alignment:
Q  272 tcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaattaat 336  Q
    ||||| |||||||||||| || ||||||||||| ||||||||||||||| || ||||||||||||    
T  12568619 tcttagggcacatgttaaacactaatttcattttattaatggtaagaatttattgaaaaattaat 12568683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 13545083 - 13545147
Alignment:
Q  272 tcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaattaat 336  Q
    ||||| |||||||||||| || ||||||||||| ||||||||||||||| || ||||||||||||    
T  13545083 tcttagggcacatgttaaacactaatttcattttattaatggtaagaatttattgaaaaattaat 13545147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 30599952 - 30599844
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  |||||||| ||||  | |||||| ||||||||||||||||| || ||| |||| |||||||||| |||||||    
T  30599952 gtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcttgtacacatgtcaataaggcagccacgtgtacaaggac 30599853  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  30599852 taaattgat 30599844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 483 - 535
Target Start/End: Complemental strand, 45898323 - 45898271
Alignment:
Q  483 cgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaa 535  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||||||||    
T  45898323 cgtggcaagaaggaagccacgtgtttagggactaatttgattgaattggaaaa 45898271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 2226142 - 2226079
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||| |||||||||||||||||||| ||| |||| |||||||||| |||||||||| |||||    
T  2226142 tgcatgctgtgttgtcttgtacacgtgtcaacaaggtagccacgtgtacaaggactaaattgat 2226079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 17515465 - 17515528
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||||||||||||||| || ||| |||| |||||||||| |||||||||| |||||    
T  17515465 tgcatgttgtgttgtcttgtacacttgtcaataaggcagccacgtgtacaaggactaaattgat 17515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 28945999 - 28945924
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| |||| ||||||| ||||||||||||| |||||||||||| ||| ||||||||||    
T  28945999 tcatgttaacttgtgcccttaaggcatatgttaaacattaatttcattccattaatggtaaaaatttaatgaaaaa 28945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 33852792 - 33852721
Alignment:
Q  339 gtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||| ||| ||||| |||||| |||||| || |||||| ||||||| ||||||||||||||||||||||||    
T  33852792 gtgaatcattaaatttgtccttgaatttttacgggttggtcaaatttatccctcaattatgcgaaatatcaa 33852721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 415 - 498
Target Start/End: Complemental strand, 39641853 - 39641770
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaag 498  Q
    |||||||||| |||||  |||||||||| || ||||||  || |||||||||||||||||||| |||| |||| ||||||||||    
T  39641853 gtccctccgttcaagtactccgttagccatgttgatctaccgtcctgcatgttgtgttgtcttatacatgtggtaagaaggaag 39641770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 41977904 - 41977967
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||||||||||||||||| ||| |||| || ||||||| |||||||||| |||||    
T  41977904 tgcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgat 41977967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 54898591 - 54898654
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||| ||||||||||||||||| ||| |||| |||||||||| |||||||||| |||||    
T  54898591 tgcatgttgcgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 54898654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 7647326 - 7647383
Alignment:
Q  262 taacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||  |||||||    
T  7647326 taacttgtgt-cttaaggcacatgttaagcattaatttcatttcattaattataagaat 7647383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 39641964 - 39641882
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    |||||||||||||||||| |||||| |||||| || ||| |||||||||  || ||||||||| | || ||||||||||||||    
T  39641964 tgagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattattcaaagtatcaacttagtcc 39641882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 54093011 - 54093089
Alignment:
Q  627 aacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    ||||||||||| |||| ||||  ||||||||||||||||||| |||  |||| |||||||||||||| ||||| |||||    
T  54093011 aacataaaaaacgtccatgacctttctccttcccgctaaaaccttcatcattttcacctctccaaaatcatcatcatct 54093089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 38191905 - 38191978
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||| | |  |||||||| || |||||| |||| ||||||||||||| |||||||||    
T  38191905 tcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 38191978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 2977454 - 2977370
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||| |||||||||||||||| |||||| ||   | |||||||||  ||||| |||||||||||||||||| | |||||||    
T  2977454 tgagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccct 2977370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 33111840 - 33111924
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||| |||||| ||||||| | ||||||||| | | || ||||||  |||||||||||||||||||||||| ||| |||||    
T  33111840 tgagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccct 33111924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 35905746 - 35905639
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | |||| |||  |||||||  |||| || |||||| || ||||||||||||||||| ||| |||| |||||||||| |||||||    
T  35905746 gtccctccgtccaaaagctccggtagtggtgatgacgtgtc-ccttgcatgatgggttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 35905648  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  35905647 taaattgat 35905639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 43765247 - 43765355
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||  | ||||||||  |||||||| ||||  | | |||||||||||||| |||||||||| ||| |||| |||||||||| ||| |||    
T  43765247 gtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttacatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaatgac 43765346  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  43765347 taaattgat 43765355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 586 - 689
Target Start/End: Original strand, 1846067 - 1846170
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||| ||||||||||  || |||||||||||||  || ||||||| ||    ||| ||||| |||||| |||||||||||| |||||||||||| ||||    
T  1846067 ccctgtattacccatatctcattcctcacatttcagtctgaaacatcaacttagtctttgacccttctctttcccgctaaaattttctccattctgacct 1846166  T
Q  686 ctcc 689  Q
    ||||    
T  1846167 ctcc 1846170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 452 - 523
Target Start/End: Original strand, 5125948 - 5126019
Alignment:
Q  452 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||| |||||||||  |||||||||||||||||| | | || |||||||||||| ||||||| ||||||||    
T  5125948 tgtcgtcctgcatgtcctgttgtcttgtacacgtgtctacaaagaagccacgtgtacaaggaccaatttgat 5126019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 23887198 - 23887281
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||||| |||||| |  ||| ||| || || ||||||||||||||||||||||||| ||| |||||    
T  23887198 gagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccct 23887281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 40508493 - 40508576
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||| | ||||||||| ||| || |||||| |||||| ||||||||||||| |||| ||| |||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccct 40508576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 48635464 - 48635381
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||| | ||||||||| | | || |||||| |||||| |||||||||||||||||| ||| |||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccct 48635381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 50360797 - 50360758
Alignment:
Q  281 acatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  50360797 acatattaagcattaatttcatttcattaatggtaagaat 50360758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 415 - 517
Target Start/End: Original strand, 600819 - 600921
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||| ||  | ||||||||  |||||||  ||||  | |||||||||||||||| |||||||||| ||| || | |||||||||| |||||||    
T  600819 gtccctccgtctaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaagcagccacgtgtacaaggac 600918  T
Q  515 taa 517  Q
    |||    
T  600919 taa 600921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 21348833 - 21348941
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  ||||| || ||||  | |||||||||||||||| |||||||||| ||| ||||  ||||||||| ||| |||    
T  21348833 gtccctccgtccaaaagctctgttagtggtgataatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaataaggcggccacgtgtacaaagac 21348932  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  21348933 taaattgat 21348941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 40998515 - 40998583
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaat 405  Q
    |||||||||||||| || |||| | |||||||||  || || |||||| ||||||||||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaat 40998583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 459 - 523
Target Start/End: Original strand, 41623806 - 41623870
Alignment:
Q  459 ctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||  |||||||||||| ||||| | | ||||||||||||||| ||||||| ||||||||    
T  41623806 ctgcatgtcttgttgtcttgtatacgtgtctacaaggaagccacgtgtacaaggaccaatttgat 41623870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 43310610 - 43310558
Alignment:
Q  278 ggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaa 330  Q
    |||||||||||||||||||| ||||| ||||||||| |||||| || ||||||    
T  43310610 ggcacatgttaagcattaatgtcattccattaatggaaagaatttattgaaaa 43310558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 44276230 - 44276122
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  |||||||| ||||  | | |||||||||| ||| |||||||||| ||| |||  |||||||||| |||||||    
T  44276230 gtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttacatgttgtgtcgtcatgtacacgtgtcaacaagacagccacgtgtacaaggac 44276131  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  44276130 taaattgat 44276122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 523
Target Start/End: Original strand, 2377184 - 2377247
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||| ||||||||| |||||||||| ||| |||| ||||||||||   ||||||||||||||    
T  2377184 tgcatgatgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtaataggactaatttgat 2377247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 24381758 - 24381817
Alignment:
Q  351 attcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||| |||||| || | | |||||||||  ||||||||||||||||||||||||    
T  24381758 attcgtccttgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaa 24381817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 35982437 - 35982362
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||   ||| ||||||| |||||||||||||||||| || ||||| ||||||| || |||||||    
T  35982437 tcatgttaacttgtgcatttacggcacatattaagcattaatttcattccactaatgttaagaatttattgaaaaa 35982362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 52378747 - 52378677
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||||   ||| |||||||||||| ||||||||| ||||| |||||||| ||||| || |||||||    
T  52378747 ttaacttgtgcctttagggcacatgttaaacattaattttatttctttaatggtgagaatttattgaaaaa 52378677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 2226286 - 2226213
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | ||||||||| |||||| |||| ||||||||||| | |||||||||    
T  2226286 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccct 2226213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 18428757 - 18428822
Alignment:
Q  345 catcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||| ||||||| | |||||| || ||| || ||| || |||||||||||||||||||||||||    
T  18428757 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 18428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 523
Target Start/End: Complemental strand, 26449258 - 26449197
Alignment:
Q  462 catgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||||||||| |||||  || ||||||||||| ||  ||||||| ||||||||    
T  26449258 catgttgtgttgtcttgtatacgtgttaacaaggaagccacatggacaaggaccaatttgat 26449197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 33850982 - 33851055
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| ||||| | | ||||||||| ||| || ||| || ||||||||||||| |||||||||||    
T  33850982 gagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaa 33851055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 38193589 - 38193516
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  38193589 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 38193516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 41979431 - 41979358
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  41979431 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 41979358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 46308817 - 46308890
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  46308817 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 46308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 53092633 - 53092706
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||| ||||||||| | |  |||||||| || |||||| |||| ||||||||||||| ||| |||||    
T  53092633 tcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccct 53092706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 53094352 - 53094279
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  53094352 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 53094279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 53190893 - 53190820
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | ||||||||| |||||| |||| ||||||||||| | |||||||||    
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccct 53190820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 3e-69; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 592 - 797
Target Start/End: Complemental strand, 18183786 - 18183581
Alignment:
Q  592 attacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaa 691  Q
    ||||||||||  |||||||| ||||||| ||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18183786 attacccatacctccttccttacatttcactcagaaacatcaaaaacgtcattgacccttctccttcccgctaaaactttctccattctcacctctccaa 18183687  T
Q  692 aaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgtt 791  Q
    || ||||| ||||| ||  ||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  18183686 aatcatcatcatctccggcgattctcacgtttttgaagtttctgtgttcggctgtggttaaaggtaacacctttcctctagtttatcaagtttctgtgtt 18183587  T
Q  792 cgtatt 797  Q
    ||||||    
T  18183586 cgtatt 18183581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 418 - 541
Target Start/End: Complemental strand, 45380995 - 45380872
Alignment:
Q  418 cctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 517  Q
    |||||||||||||| |||||||||| || |||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45380995 cctccgtccaagtgctccgttagccatggtgacatgtcgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 45380896  T
Q  518 tttgattgatttggaaaaagtcca 541  Q
    ||||||||| ||||||||||||||    
T  45380895 tttgattgaattggaaaaagtcca 45380872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 416 - 538
Target Start/End: Complemental strand, 33685262 - 33685140
Alignment:
Q  416 tccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggact 515  Q
    ||||||| |||||||| |||||||||| ||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33685262 tccctccatccaagtgctccgttagccatgccgatgtgtcgccctgcatgttgagttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggact 33685163  T
Q  516 aatttgattgatttggaaaaagt 538  Q
    ||||||||||| |||||||||||    
T  33685162 aatttgattgaattggaaaaagt 33685140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 415 - 541
Target Start/End: Original strand, 42134592 - 42134718
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||  |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  42134592 gtccctccgtccaagtgctccgttagccatgttgacatgtcaccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggac 42134691  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    |||||||||||| ||||||||||||||    
T  42134692 taatttgattgaattggaaaaagtcca 42134718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 586 - 797
Target Start/End: Original strand, 6575448 - 6575660
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| |||||||||  | ||||| |||||||| ||||||||| |||||||||||| |||||||||| ||||||||||||     
T  6575448 ccctgcattacccatacctccttcttcacatttcagttagaaaaataaaaaacgtccttgacccttctccttcccactaaaactttatccattctcaccc 6575547  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggt-taaaggtaacacctttcctctaatttatcaagttt 784  Q
    |||||||| ||||| ||||| ||| |||||| || |||||||||||  |||||||||||||  |  ||||||||| | |||||| |  ||||||||||||    
T  6575548 ctccaaaatcatcatcatctccgatgattctgacgtttttgaagtttatgtgttcggttgttttaaaaaggtaacgcttttcctgttgtttatcaagttt 6575647  T
Q  785 ctgtgttcgtatt 797  Q
     ||||||||||||    
T  6575648 atgtgttcgtatt 6575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 46638821 - 46638701
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  46638821 gtccctccgtccaagtgctccgttagccatgctgatctgtcgccttgcatgttgtgttgtcttgtacgcgtggcaaaaaggaagccacgtgttcagggac 46638722  T
Q  515 taatttgattgatttggaaaa 535  Q
     ||||||||||| ||||||||    
T  46638721 gaatttgattgaattggaaaa 46638701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 36895524 - 36895404
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||| |||||||||| |||||||||| || |||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36895524 gtcccttcgtccaagtgctccgttagccatgctgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggac 36895425  T
Q  515 taatttgattgatttggaaaa 535  Q
     ||||||||||| ||||||||    
T  36895424 gaatttgattgaattggaaaa 36895404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 627 - 797
Target Start/End: Complemental strand, 46638614 - 46638444
Alignment:
Q  627 aacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttg 726  Q
    ||||| ||||| ||| ||||| ||||| |||  ||||||||||| ||||||| ||||| |||||||| ||||| ||||||||| |||||| |||||||||    
T  46638614 aacatcaaaaacgtctttgacccttcttcttttcgctaaaacttcctccattttcacccctccaaaatcatcatcatcttcgacgattctgacatttttg 46638515  T
Q  727 aagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
    |||||  ||||||||| |||| ||||||||||||| |||||| |  |||||||||||| ||||||||||||    
T  46638514 aagtttgtgtgttcggctgtgattaaaggtaacacatttcctgttgtttatcaagtttttgtgttcgtatt 46638444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 35479814 - 35479602
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    |||| |||||||||||  |||||| ||| |||||  ||||||| |||||||| ||||||||| |||||||||||| |||||||||| | ||||||| |||    
T  35479814 ccctacattacccatacatccttcttcatatttcagtcagaaaaataaaaaacgtccttgacccttctccttcccactaaaactttattcattctcgcct 35479715  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggtt---aaaggtaacacctttcctctaatttatcaagt 782  Q
    |||||||| ||||| ||||||||| |||||| |  |||||||||||  ||| |||||||||  ||   ||||||||| |||||||| |  ||||||||||    
T  35479714 ctccaaaatcatcatcatcttcgacgattctgatgtttttgaagtttctgtattcggttgt--ttcaaaaaggtaacgcctttcctgttgtttatcaagt 35479617  T
Q  783 ttctgtgttcgtatt 797  Q
    || ||||||||||||    
T  35479616 ttatgtgttcgtatt 35479602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 415 - 535
Target Start/End: Original strand, 31801743 - 31801863
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||| ||||| | |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  31801743 gtccctccgtccaagtgctccgttagccatgctgatttgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagtcacgtgttcagggac 31801842  T
Q  515 taatttgattgatttggaaaa 535  Q
     ||||||||||| ||||||||    
T  31801843 gaatttgattgaattggaaaa 31801863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 414 - 538
Target Start/End: Original strand, 44157542 - 44157665
Alignment:
Q  414 agtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagga 513  Q
    ||||| |||||| ||||| ||||| |||| |  |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44157542 agtccttccgtctaagtgctccgtcagccatagtgacatgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaa-ga 44157640  T
Q  514 ctaatttgattgatttggaaaaagt 538  Q
    ||||||||||||| |||||||||||    
T  44157641 ctaatttgattgaattggaaaaagt 44157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 590 - 797
Target Start/End: Original strand, 42134765 - 42134972
Alignment:
Q  590 gcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctcc 689  Q
    ||||||||||||  || ||| |||||||||  |||||||||| |||||  ||||||||  |||  ||| |||||||||||||||||||||||||| ||||    
T  42134765 gcattacccatacctctttcttcacatttcagtcagaaacatcaaaaacatccttgacctttcatctttccgctaaaactttctccattctcacccctcc 42134864  T
Q  690 aaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtg 789  Q
    |||| |||||  ||| |||  |||||| || |||||||||||  ||||||||| |||| ||||||||||||||||||   |  ||||||||| |||||||    
T  42134865 aaaatcatcataatcatcggcgattctgacgtttttgaagtttatgtgttcggatgtgattaaaggtaacacctttcaggttgtttatcaagattctgtg 42134964  T
Q  790 ttcgtatt 797  Q
    ||||||||    
T  42134965 ttcgtatt 42134972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 797
Target Start/End: Original strand, 31801950 - 31802120
Alignment:
Q  627 aacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttg 726  Q
    ||||| ||||| ||| ||||| ||||| |||| ||||||||||| ||||| | ||||  |||||||| ||||| ||||| ||  |||||| |||||||||    
T  31801950 aacatcaaaaacgtcattgacccttcttcttctcgctaaaacttcctccactttcactcctccaaaatcatcatcatctccggcgattctgacatttttg 31802049  T
Q  727 aagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
    |||||  ||||||||| |||| |||||||||||||||||||| |  |||||||||||| ||||||||||||    
T  31802050 aagtttgtgtgttcggctgtgattaaaggtaacacctttcctgttgtttatcaagtttttgtgttcgtatt 31802120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 426 - 541
Target Start/End: Complemental strand, 18183947 - 18183832
Alignment:
Q  426 caagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattg 525  Q
    |||||| |||||||||| || |||| ||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |    
T  18183947 caagtgctccgttagccatgctgatttgtcgtccagcatgttgtgttgtcttgtacacgtggcaaaaaagaagccacgtgttcaaggactaatttgatgg 18183848  T
Q  526 atttggaaaaagtcca 541  Q
    |  |||||||| ||||    
T  18183847 aagtggaaaaattcca 18183832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 35479989 - 35479867
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||| |||||||||||| || ||||||  || |||||||||||| |||||| | ||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  35479989 gtccttccgtccaagtgctctgttagca-tgctgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaaagaagccacgtgttcagggac 35479891  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    |||||||||||| || ||||||||    
T  35479890 taatttgattgaatttgaaaaagt 35479867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 36895354 - 36895148
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| ||||||||| |     ||||| ||||| ||| ||||  ||||| |||| ||||||||||  ||||||| ||| |     
T  36895354 ccctgcattacccatacctccttcttcacatttcac-----aacatcaaaaacgtcattgatccttcttcttctcgctaaaactacctccattttcatcc 36895260  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||| |||||| ||| ||||||||||  | ||||||| |||| ||||||||| |||||||||| |  ||||||||||||     
T  36895259 ctccaaaatcatcatcatctccgacgattctgacagttttgaagtttgtttgttcggctgtgattaaaggtagcacctttcctgttgtttatcaagtttt 36895160  T
Q  786 tgtgttcgtatt 797  Q
    ||||||||||||    
T  36895159 tgtgttcgtatt 36895148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 605 - 765
Target Start/End: Complemental strand, 45380806 - 45380646
Alignment:
Q  605 ccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatc 704  Q
    ||||| |||||||||  |||||||||| |||||  ||||||||  ||| | || |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  45380806 ccttcttcacatttcagtcagaaacatcaaaaacatccttgacctttcacatttccgctaaaactttctccattctcacccctccaaaatcatcatcatc 45380707  T
Q  705 ttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacaccttt 765  Q
      ||  |||||| || |||||||||||  ||||||||| |||| ||||||||||| |||||    
T  45380706 accggcgattctgacgtttttgaagtttatgtgttcggctgtgattaaaggtaacgccttt 45380646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 44157433 - 44157516
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||||  |||||||||||||| |||||||||||||||||||    
T  44157433 gagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccct 44157516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 460 - 538
Target Start/End: Original strand, 27940763 - 27940841
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  27940763 tgcatgatgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttggaaaaagt 27940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 447 - 526
Target Start/End: Original strand, 6575332 - 6575411
Alignment:
Q  447 tgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattga 526  Q
    |||| ||||| | |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6575332 tgatatgtcgtcatgcatgctttgttgtcttgtacgcgtggcaagaaggaagccacgtgttcaaggactaatttgattga 6575411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 42134482 - 42134565
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||||| |||||| || ||| ||||||| |  ||||||||||||||||||||||||||||||||||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccct 42134565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 586 - 797
Target Start/End: Original strand, 44158068 - 44158276
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  ||||||   |||||||  |||||||||| |||||  ||||||||  ||| |||| |  |||||||||||||||||||||||     
T  44158068 ccctgcattacccatacctccttc---acatttcagtcagaaacatcaaaaacatccttgacctttcacctttctactaaaactttctccattctcaccc 44158164  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
     | ||||| ||||| ||||  ||  |||||| || |||||||||||  ||||||||| |||| ||||||||||| ||||||   |  ||||||||| ||     
T  44158165 tttcaaaatcatcatcatcaccggcgattctgacttttttgaagtttatgtgttcggctgtgattaaaggtaacgcctttcaggttgtttatcaagattt 44158264  T
Q  786 tgtgttcgtatt 797  Q
    ||||||||||||    
T  44158265 tgtgttcgtatt 44158276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 606 - 787
Target Start/End: Complemental strand, 47269278 - 47269097
Alignment:
Q  606 cttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    |||| ||||||||  ||||||| ||| |||||  ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||  |||||    
T  47269278 cttcttcacattttactcagaaccatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattttcacccctccaaaatcatcctcatct 47269179  T
Q  706 tcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctg 787  Q
     |   ||||||  | | |||||||||  ||||||||   ||| | |||||||||||||||||| |  ||||||||| |||||    
T  47269178 ccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacctttccttttgtttatcaagattctg 47269097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 461 - 538
Target Start/End: Complemental strand, 47269424 - 47269347
Alignment:
Q  461 gcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    ||||| |||| |||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  47269424 gcatggtgtgctgtcctgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttggaaaaagt 47269347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 5198974 - 5198899
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  5198974 tcatattaacttgtgctcttagggcacatgttaaacattaatttcatttcataaatggtaagaatttaatgaaaaa 5198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 27940608 - 27940681
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||||||| || |||| | |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  27940608 gagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaa 27940681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 337 - 418
Target Start/End: Original strand, 31801633 - 31801714
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    |||| ||| ||||||||||||| |||||||||||| || || ||| || |||||||||||||||||||||||||||||||||    
T  31801633 gagtaaacaatcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcc 31801714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 47370288 - 47370361
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaa 329  Q
    |||| |||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| || |||||    
T  47370288 tcatgttaacttgtgtaattatggcacatgttaagcattaatgtcatttcattaatggtaagaatttattgaaa 47370361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 6818692 - 6818584
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||  | |||||||||||||||| |||||||||| ||| |||| |||||||||| |||||||    
T  6818692 gtccctccgtccaaaagctccgttagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggac 6818593  T
Q  515 taatttgat 523  Q
    |||||||||    
T  6818592 taatttgat 6818584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 3491409 - 3491484
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  3491409 tcatgttaacttgtgcccttagggcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaa 3491484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 18184067 - 18183984
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||| || |||||| || | | ||||||| |  ||||||||||||||||||||||||||||||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccct 18183984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 36895637 - 36895551
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||| |||| | |||||||||  || || ||| || |||| ||||||||||||||||||||||||||||||    
T  36895637 aatgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccct 36895551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 46638932 - 46638850
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||||||||||||||||| | | |||||||||  || |||||| ||  ||||||||||||||||||||||||||||||||    
T  46638932 tgagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtcc 46638850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 48022887 - 48022817
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||||  |||| |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  48022887 ttaacttgtgcccttagggcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaa 48022817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 337 - 414
Target Start/End: Complemental strand, 35480099 - 35480022
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaactta 414  Q
    |||||||||||||| ||||||||| ||||||||| | |  ||||||||  ||||||||||||||||||||||||||||    
T  35480099 gagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaactta 35480022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 335 - 419
Target Start/End: Original strand, 11152543 - 11152627
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccc 419  Q
    ||||||||| |||||| ||||||| | ||||||||| ||| |||||| || ||||||||||||||||||||||||| ||| ||||    
T  11152543 atgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatccc 11152627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 443 - 523
Target Start/End: Original strand, 15104579 - 15104659
Alignment:
Q  443 gtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||| ||||  | |||||| |||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||    
T  15104579 gtgatgatgtgtcttcttgcatgctgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgat 15104659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 34778152 - 34778045
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  |||| || ||||| ||||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  34778152 gtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatattgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 34778054  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  34778053 taaattgat 34778045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 21276536 - 21276611
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| | ||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  21276536 tcatgttaacttgtgcccttaggacacatgttaagcattaatttcattctattaatggtaagaatttaatgaaaaa 21276611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 642 - 797
Target Start/End: Complemental strand, 33683006 - 33682860
Alignment:
Q  642 cttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcg 741  Q
    |||||| |||||||||||||||||||||||||||          || ||||| ||||| ||||| ||  |||| | || |||||||||||  ||||||||    
T  33683006 cttgacccttctccttcccgctaaaactttctccc---------cttcaaaatcatcatcatctccggcgattatgacgtttttgaagtttctgtgttcg 33682916  T
Q  742 gttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
      |||| ||||||||||| |||||||| |  |||||||||||||||||||||||||    
T  33682915 actgtgattaaaggtaacgcctttcctattgtttatcaagtttctgtgttcgtatt 33682860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 298382 - 298304
Alignment:
Q  254 gatcatcttaacttgtgttcttatggca-catgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||| ||||||||||  |||| |||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  298382 gatcatgttaacttgtgcccttaaggcaacatgttaagcattaatttcattccattaatagtaagaatttaatgaaaaa 298304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 604 - 678
Target Start/End: Original strand, 27940908 - 27940982
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccatt 678  Q
    |||||| ||||||||  ||||||||||| |||||  || |||||||||||||||||||||||||| |||||||||    
T  27940908 tccttcttcacattttactcagaaacatcaaaaacatcattgactcttctccttcccgctaaaacgttctccatt 27940982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 31803794 - 31803708
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||| |||||| ||||||| | ||||||||| ||| |||||| || |||| |||||||||||||||||||| ||| |||||    
T  31803794 aatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccct 31803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 47269581 - 47269507
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||||||||||||||||||| | |||||||||  || ||||||||| ||||||||||||| |||||| ||||    
T  47269581 tgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaa 47269507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 33685372 - 33685299
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||||||||||||||| | |||||| || ||| || ||||||  ||||||||||||||||||||||||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaa 33685299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 4855980 - 4855873
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | |||||||   |||||||  |||| || ||||||||||||||||||||||||||| ||| |||| || ||||||| |||||||    
T  4855980 gtccctccgtccaaaagctccgttaatggtgatgacgtgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggac 4855882  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  4855881 taaattgat 4855873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 5784963 - 5784875
Alignment:
Q  332 ttaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||| ||||||| |||||| ||||||| | ||||||||| ||| || ||| || ||||||||||||||||||||||||| ||| |||||    
T  5784963 ttaacgagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccct 5784875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 457 - 517
Target Start/End: Original strand, 51122057 - 51122117
Alignment:
Q  457 ccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 517  Q
    ||||||||||||||||||| |||||||||| ||| ||||||| ||||||| ||||||||||    
T  51122057 ccctgcatgttgtgttgtcatgtacacgtgtcaaaaaggaagtcacgtgtacaaggactaa 51122117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 420 - 515
Target Start/End: Original strand, 27087398 - 27087492
Alignment:
Q  420 tccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggact 515  Q
    |||||||||  | ||||||||  |||||||| |||| || |||||| |||||||||||||||||||| ||| |||| |||||||||| ||||||||    
T  27087398 tccgtccaaaagctccgttagtggtgatgatgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggact 27087492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 35478087 - 35478170
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||| ||| | ||||||||| ||| ||||||||| ||||||||||||||| ||||||||| ||| |||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccct 35478170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 38788846 - 38788913
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaa 328  Q
    |||||||||||  |||||||||||||||| |||||||||||||  |||||| |||||||| |||||||    
T  38788846 ttaacttgtgtcattatggcacatgttaaacattaatttcattctattaatagtaagaatttaatgaa 38788913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 45379085 - 45379168
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||| | ||||||||| ||| |||||| || |||||| |||||||||||||||||| ||| |||||    
T  45379085 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccct 45379168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 52141472 - 52141547
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| |||| ||||||||||||||||||||| || |||||||||| || ||||||||||    
T  52141472 tcatgttaacttgtgcccttagggcatatgttaagcattaatttcattccactaatggtaagtatttaatgaaaaa 52141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 523
Target Start/End: Complemental strand, 3013486 - 3013376
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    ||||||||||||||||  | ||||||||  |||||||| | ||  | ||||||  |||||||| |||||||||| ||| |||| |||||||||| |||||    
T  3013486 tagtccctccgtccaaaagctccgttagtggtgatgatgtatcctcttgcatgccgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaagg 3013387  T
Q  513 actaatttgat 523  Q
    ||||| |||||    
T  3013386 actaaattgat 3013376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 462 - 523
Target Start/End: Complemental strand, 31238462 - 31238401
Alignment:
Q  462 catgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||| ||||||||| |||||||||| ||| |||| |||||||||| ||||||||||||||||    
T  31238462 catgctgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgat 31238401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 2869689 - 2869797
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  |||||||| ||||  | |||||| ||||||||| |||||||||| ||| |||| |||||| ||| |||||||    
T  2869689 gtccctccgtccaaaagctctgttagtggtgatgatgtgtcatcttgcatgatgtgttgtcctgtacacgtgtcaacaaggcagccacatgtacaaggac 2869788  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  2869789 taaattgat 2869797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 407 - 523
Target Start/End: Complemental strand, 33602666 - 33602550
Alignment:
Q  407 tcaacttagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgt 506  Q
    |||| |||||||||||||||||  | ||||||||   ||||||| || |  | ||||||||||||||||||||||||||| ||  |||  ||||| ||||    
T  33602666 tcaaattagtccctccgtccaaaaggtccgttagtaatgatgatgtggcttcttgcatgttgtgttgtcttgtacacgtgtcagcaagtcagccatgtgt 33602567  T
Q  507 tcaaggactaatttgat 523  Q
     |||||||||| |||||    
T  33602566 acaaggactaaattgat 33602550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 37344452 - 37344560
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||  | |||||| ||||||||| |||||||||| ||| |||| ||||||||||  ||||||    
T  37344452 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtataaggac 37344551  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  37344552 taaattgat 37344560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 50556111 - 50556003
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  ||||||   ||||  | |||||| ||||||||| |||||||||| ||| |||| || ||||||| |||||||    
T  50556111 gtccctccgtccaaaagctccgttagtggtgatggcgtgtcatcttgcatgctgtgttgtcatgtacacgtgtcaacaagggagtcacgtgtacaaggac 50556012  T
Q  515 taatttgat 523  Q
    |||||||||    
T  50556011 taatttgat 50556003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 27952583 - 27952508
Alignment:
Q  345 catcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||| || |||| | |||| |||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||    
T  27952583 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 27952508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 353 - 416
Target Start/End: Complemental strand, 45381092 - 45381029
Alignment:
Q  353 tcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagt 416  Q
    ||||||||||||||| || ||  || ||||||  ||||||||||||||||||||||||||||||    
T  45381092 tcgtccttaaatttttacgggaaggtcaaattcatccctcaattatgcgaaatatcaacttagt 45381029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 410
Target Start/End: Original strand, 47264122 - 47264197
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||||||||| || |||| | |||||||||  || |||||| || |||||||||||||||||||| ||||    
T  47264122 atgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaa 47264197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 15881122 - 15881172
Alignment:
Q  281 acatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||||||||||| |||||||||||||||| |||| |||||    
T  15881122 acatattaagcattaatttcattccattaatggtaagaatttaattaaaaa 15881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 43868722 - 43868832
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    |||||| ||||||||| || ||||||||   || |||  ||||| | |||||||  |||||||||||||||||| | | ||||||| ||||||| |||||    
T  43868722 tagtccttccgtccaaatgctccgttagtgctgctgagttgtcgtcatgcatgtcatgttgtcttgtacacgtgtctacaaggaagtcacgtgtacaagg 43868821  T
Q  513 actaatttgat 523  Q
    || ||||||||    
T  43868822 accaatttgat 43868832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 48722696 - 48722746
Alignment:
Q  279 gcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaa 329  Q
    ||||||||||| ||||||||||||| |||||||||||||||| || |||||    
T  48722696 gcacatgttaaacattaatttcattccattaatggtaagaatttattgaaa 48722746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 27087293 - 27087366
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||| | |  | || ||||||||||||| |||| ||||||||||| | |||||||||    
T  27087293 tcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccct 27087366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 33679259 - 33679332
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| || |||| | |||||| || |||  |||||||| |||||||||||||||||||||||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaa 33679332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 25278382 - 25278274
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||  | |||||| |||| |||| |||||||||| ||| |||| ||||||||||  ||||||    
T  25278382 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgctgtcatgtacacgtgtcaacaaggcagccacgtgtataaggac 25278283  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  25278282 taaattgat 25278274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 943266 - 943195
Alignment:
Q  255 atcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatg 326  Q
    ||||| ||||||||||  || | || ||||||||| ||||||||||||| ||||||| |||||||| |||||    
T  943266 atcatgttaacttgtgccctcagggtacatgttaaacattaatttcattccattaatagtaagaatttaatg 943195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 5783502 - 5783561
Alignment:
Q  464 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  5783502 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 5783561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 12521442 - 12521391
Alignment:
Q  280 cacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||| |||||    
T  12521442 cacatgttaaacattaatttcattctattaatggtaagaatttaattaaaaa 12521391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 26225523 - 26225460
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||| |||||||||||||||||||| ||| || | |||||| ||| |||||||||| |||||    
T  26225523 tgcatgatgtgttgtcttgtacacgtgtcaacaaagcagccacatgtacaaggactaaattgat 26225460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 38942817 - 38942759
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaa 319  Q
    |||||||| || |||| | |||||||||||||||||| ||||| ||||||| |||||||    
T  38942817 ttaacttgcgtccttaagacacatgttaagcattaatgtcattccattaatagtaagaa 38942759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 4856080 - 4856007
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | ||||||||  |||||| |||| ||||||||||||| |||||||||    
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccct 4856007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 13351543 - 13351592
Alignment:
Q  282 catgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||||| ||||||| ||||| |||||||||||||||| || |||||||    
T  13351543 catgttaaacattaatgtcattccattaatggtaagaatttattgaaaaa 13351592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 31238609 - 31238536
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| |||||| | |  | |||||||||||||||| |||| ||||||||||| | |||||||||    
T  31238609 tcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccct 31238536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 34778252 - 34778179
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | ||||||||  |||||| |||| ||||||||||||| |||||||||    
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccct 34778179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 44159385 - 44159312
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| ||||||| | ||||||||||| | || ||| || |||||| |||||||| |||||||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaa 44159312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 46583670 - 46583597
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | || ||| ||||||||| |||| ||||||||||||| |||||||||    
T  46583670 tcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccct 46583597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 50176757 - 50176806
Alignment:
Q  262 taacttgtgttcttatggcacatgttaagcattaatttcatttcattaat 311  Q
    ||||||||||||||||| |||||||||| ||||||| | ||| |||||||    
T  50176757 taacttgtgttcttatgacacatgttaaacattaatgttattccattaat 50176806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 1e-59; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 586 - 802
Target Start/End: Original strand, 23954087 - 23954303
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||| ||||||||||  ||||||||||||||||| ||| |||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  23954087 ccctgtattacccatacctccttcctcacatttctttcataaacataaaaaacgtccttgactcttctcctacctgctaaaactttctccattctcacct 23954186  T
Q  686 ctccaaaaccatcaccatct-tcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagttt 784  Q
    |||||||| ||||| ||||| |||  ||||||||| |||||||||||  || |||||| |||||||||||||| |||||||||| || || |||||||||    
T  23954187 ctccaaaatcatcatcatctctcg-cgattctcacgtttttgaagtttctgagttcggctgtggttaaaggtagcacctttcctatagttaatcaagttt 23954285  T
Q  785 ctgtgttcgtatttacca 802  Q
    ||||||||||||| ||||    
T  23954286 ctgtgttcgtattcacca 23954303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 586 - 790
Target Start/End: Original strand, 40784628 - 40784832
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||| ||||  |||||| ||||||||| || ||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||     
T  40784628 ccctgcattactcatacctccttcttcacatttcacttagaaacataaaaaatatcattgacccttctccttcccgctaaaactttctccattctcaccc 40784727  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| |||||||||||| |  ||||||||| | ||||||||| ||||||||||||||||||||||||||| | ||| || || |||||||| ||||    
T  40784728 ctccaaaatcatcaccatctttggcgattctcacgtgtttgaagtttttgtgttcggttgtggttaaaggtaacgcattttctgtagtttatcaaatttc 40784827  T
Q  786 tgtgt 790  Q
    |||||    
T  40784828 tgtgt 40784832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 592 - 782
Target Start/End: Original strand, 27955657 - 27955846
Alignment:
Q  592 attacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaa 691  Q
    ||||||||||  ||||||||||| ||||  |||||||||| ||||| ||||||||| ||||| ||||||||| |||| ||| ||||||||||||||||||    
T  27955657 attacccatacctccttcctcacttttcagtcagaaacattaaaaacgtccttgacccttctgcttcccgcttaaaccttc-ccattctcacctctccaa 27955755  T
Q  692 aaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagt 782  Q
    || ||||| ||||| ||| ||| |||  |||||| |||||||||||||||  |||||| ||||||||||| ||||||||||||||| ||||    
T  27955756 aatcatcatcatctccgacgatcctctaattttttaagttgttgtgttcgtctgtggtaaaaggtaacacatttcctctaatttatgaagt 27955846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 46996716 - 46996596
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||  || |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46996716 gtccctccgtccaagtgctccgttagcgatgctgatctgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcaaggac 46996617  T
Q  515 taatttgattgatttggaaaa 535  Q
     ||||||||||| ||||||||    
T  46996616 gaatttgattgaattggaaaa 46996596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 23953915 - 23954023
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  23953915 gtccctccgtccaagtgctccgttagccatgctgatatgtcgccatgcatgttgtgttgtcttgtacacgtggcaaaaaggaagccacgtgttccaggac 23954014  T
Q  515 taatttgat 523  Q
    |||||||||    
T  23954015 taatttgat 23954023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 627 - 797
Target Start/End: Complemental strand, 46996512 - 46996339
Alignment:
Q  627 aacataaaaaatgtccttgac---tcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacattt 723  Q
    ||||| ||||| |||||||||   |||||| |||| ||||||||||| ||||||| ||||| |||||||| ||||| ||||| ||| |||||| ||||||    
T  46996512 aacatcaaaaacgtccttgacccttcttcttcttctcgctaaaacttcctccattttcacccctccaaaatcatcatcatctccgacgattctgacattt 46996413  T
Q  724 ttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgtatt 797  Q
    ||||||||  ||||||||| |||| |||||||||||||||||||| |  |||||||||||| ||||||||||||    
T  46996412 ttgaagtttgtgtgttcggctgtgattaaaggtaacacctttcctgttgtttatcaagtttttgtgttcgtatt 46996339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 419 - 541
Target Start/End: Complemental strand, 47341696 - 47341570
Alignment:
Q  419 ctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgt----tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||| |||||||||| ||  ||  ||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47341696 ctccgtccaagtgctccgttagccatggggacatgtcgccctgcatgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 47341597  T
Q  515 taatttgattgatttggaaaaagtcca 541  Q
    |||||||||||| ||||||||||||||    
T  47341596 taatttgattgaattggaaaaagtcca 47341570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 415 - 535
Target Start/End: Complemental strand, 33038811 - 33038691
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| || ||||| | || |||||||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  33038811 gtccctccgtccaagtgctctgttaggcatgttgatctgtcgtcctgcatgttgtgttgtcttatacacgtgtcaagaaggaagccatgtgttcaaggac 33038712  T
Q  515 taatttgattgatttggaaaa 535  Q
    | |||||||||| ||||||||    
T  33038711 tgatttgattgaattggaaaa 33038691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 586 - 719
Target Start/End: Original strand, 2167755 - 2167888
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||| ||||||||||  ||||||||||||||||  |||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||||||||    
T  2167755 ccctgtattacccatacctccttcctcacatttcaatcagaaacatcaaaaacgtctttgacccttctccttcccgctaaaactttctccattctcacct 2167854  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcac 719  Q
    |||||||| ||||  ||||| ||  |||||||||    
T  2167855 ctccaaaatcatcttcatctccggcgattctcac 2167888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 447 - 535
Target Start/End: Original strand, 40784488 - 40784576
Alignment:
Q  447 tgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaa 535  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  40784488 tgatctgtcgtcctgcatgttgtgttgtcttatacacgtggcaagaaggaagccacatgttcaaggactaatttgattgaattggaaaa 40784576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 33038648 - 33038438
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||  ||||  |||||| ||||||||| ||||||||||| ||||| ||| || || |||| |||||||||||||||||||||||||| ||||     
T  33038648 ccctgcattatacatacctccttcttcacatttcactcagaaacatcaaaaacgtcattaacccttccccttcccgctaaaactttctccattcccaccc 33038549  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||  ||||||||  |||||||||||  || ||||   |||| ||||||||||  |||||| | || ||||||||||||     
T  33038548 ctccaaaatcatcatcatctccggcgattctcatgtttttgaagtttatgcgttcaactgtgattaaaggtaa-gcctttcatgtagtttatcaagttta 33038450  T
Q  786 tgtgttcgtatt 797  Q
    ||||||||||||    
T  33038449 tgtgttcgtatt 33038438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 586 - 705
Target Start/End: Original strand, 38613746 - 38613865
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||| |||| |||||  || ||||||||||||| ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||    
T  38613746 ccctgtattatccatacctcattcctcacatttcactcagaaacatcaaaaatgtcattgacccttctccttcccgctaaaactttctctattctcacct 38613845  T
Q  686 ctccaaaaccatcaccatct 705  Q
    |||||||| ||||| |||||    
T  38613846 ctccaaaatcatcatcatct 38613865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 420 - 535
Target Start/End: Complemental strand, 46812591 - 46812476
Alignment:
Q  420 tccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatt 519  Q
    |||||||||||| || ||||||| || |||| |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| ||    
T  46812591 tccgtccaagtgctctgttagccatgctgatatgtcgccctgcatgctgtgttgtcttgtacgtgtggcaagaaggaagccacgtgttcaaggactactt 46812492  T
Q  520 tgattgatttggaaaa 535  Q
    ||||||| || |||||    
T  46812491 tgattgaatttgaaaa 46812476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 586 - 742
Target Start/End: Complemental strand, 46812425 - 46812269
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||| ||||  || ||| |||||||||  |||||||||| ||||| | |||||||  ||||||||||| |||||||||||||||||||||||     
T  46812425 ccctgcattactcatacctcattcttcacatttcagtcagaaacatcaaaaacgaccttgacctttctccttcccactaaaactttctccattctcaccc 46812326  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcgg 742  Q
    |||||||| ||||| ||||| ||| |||||| || |||||||||||  |||||||||    
T  46812325 ctccaaaatcatcatcatctccgacgattctgacgtttttgaagtttctgtgttcgg 46812269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 433 - 538
Target Start/End: Complemental strand, 8423277 - 8423172
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  ||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  8423277 tccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 8423178  T
Q  533 aaaagt 538  Q
    ||||||    
T  8423177 aaaagt 8423172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 2167589 - 2167697
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| ||| |||||| || |||  |||| ||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  2167589 gtccctccgtccaagtgctccattagccatgctgacgtgtcaccctgcatgatgtgttgtcttgtacacgtggcaaaaagaaagccacgcgttcaaggac 2167688  T
Q  515 taatttgat 523  Q
    |||||||||    
T  2167689 taatttgat 2167697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 27955480 - 27955588
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||| | || |||| |||||  ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  27955480 gtccctccgtccaagtgctccgttagtcatgctgatgtgtcgtgctgcatgttgtgttgtcttgtacacttggcaacaaggaagccatgtgttcaaggac 27955579  T
Q  515 taatttgat 523  Q
     ||||||||    
T  27955580 caatttgat 27955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 47341811 - 47341727
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  47341811 tgagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccct 47341727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 38613605 - 38613522
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccct 38613522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 433 - 538
Target Start/End: Complemental strand, 35344286 - 35344181
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  ||| ||| |||||| |||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  35344286 tccgttagccatgctgacatgttgccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 35344187  T
Q  533 aaaagt 538  Q
    ||||||    
T  35344186 aaaagt 35344181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 418 - 523
Target Start/End: Original strand, 2492439 - 2492544
Alignment:
Q  418 cctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 517  Q
    ||||||| |||||| |||||||||| || |||||| ||||||  |||| | || ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  2492439 cctccgttcaagtgctccgttagccatgttgatctatcgcccaacatgctctgctgtcttgtacacgtggcaaaaaggaagtcacgtgttcaaggactaa 2492538  T
Q  518 tttgat 523  Q
    ||||||    
T  2492539 tttgat 2492544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 586 - 797
Target Start/End: Complemental strand, 47341532 - 47341324
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| |||||||||  | |||||||| |||||  ||||||||  ||| |||| ||||||||||||||| ||||||||||     
T  47341532 ccctgcattacccatacctccttcttcacatttcagtgagaaacatcaaaaacatccttgacatttcacctttccgctaaaactttcttcattctcaccc 47341433  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| || |   || |||||| |  ||||||| |||  ||||||||| |||| ||||||||||| ||||||   |  |||| |||| |||    
T  47341432 ctccaaaatcatcatcacc---gacgattctgaagtttttgacgtttctgtgttcggctgtgattaaaggtaacgcctttcaagttgtttaccaagattc 47341336  T
Q  786 tgtgttcgtatt 797  Q
    ||||||||||||    
T  47341335 tgtgttcgtatt 47341324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 46996828 - 46996746
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtc 417  Q
    |||||||||||||||||||||||| | |||||||||  || |||||| || ||||||||||||||||||||||||||||||||    
T  46996828 atgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtc 46996746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 604 - 705
Target Start/End: Complemental strand, 8423105 - 8423004
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| ||||||||  ||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||| ||| | |||||||| ||||| |||    
T  8423105 tccttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcatccctccaaaatcatcatcat 8423006  T
Q  704 ct 705  Q
    ||    
T  8423005 ct 8423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 337 - 418
Target Start/End: Original strand, 23953805 - 23953886
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||||||||||||||||||||||||||| || ||| ||  ||||| |||| ||||||||||||||||||||||||||||    
T  23953805 gagtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtcc 23953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 604 - 705
Target Start/End: Complemental strand, 35344114 - 35344013
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| ||||||||  ||||||||||| |||||  ||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||    
T  35344114 tccttcttcacattttactcagaaacatcaaaaacatccttaactcttctccttcccgctaaaacgttctccattgtcacccctccaaaatcatcatcat 35344015  T
Q  704 ct 705  Q
    ||    
T  35344014 ct 35344013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 33038930 - 33038838
Alignment:
Q  328 aaaattaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||| |||||||||| |||||||||||||||| |||||| |  ||| || ||||||  ||||||||||||||||||||||||||||||||||    
T  33038930 aaaatgaatgagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccct 33038838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 38615044 - 38614952
Alignment:
Q  328 aaaattaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||| || ||||||| |||||||||||||||||||||||||| ||| |  ||||||  ||||||||||||||||||||| ||||||||||||    
T  38615044 aaaataaaagagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccct 38614952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 452 - 523
Target Start/End: Original strand, 38613610 - 38613681
Alignment:
Q  452 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||||| ||||||||||||||||||||| || ||| |||||||||||||||||||||| |||||    
T  38613610 tgtcgccctgcatggtgtgttgtcttgtacacgtgggaaaaagaaagccacgtgttcaaggactaacttgat 38613681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 393 - 523
Target Start/End: Complemental strand, 46439566 - 46439436
Alignment:
Q  393 aattatgcgaaatatcaacttagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaaga 492  Q
    |||| ||||||||||| | |||||||||||||||||  | ||||||||  |||| ||| ||||  | ||||||||||||||||||||||||||| ||| |    
T  46439566 aattttgcgaaatatctatttagtccctccgtccaaaagctccgttagtggtgacgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaaca 46439467  T
Q  493 aggaagccacgtgttcaaggactaatttgat 523  Q
     || |||||||||| || ||||||| |||||    
T  46439466 gggcagccacgtgtacatggactaaattgat 46439436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 8423405 - 8423322
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || |||| | ||||||||| |||  |||||||||||||||||||||||||||||||||| ||| |||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccct 8423322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 6727265 - 6727203
Alignment:
Q  254 gatcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaa 316  Q
    |||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  6727265 gatcatgttaacttgtgtccttatggcatatgttaaacattaatttcatttcattaatggtaa 6727203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 38073568 - 38073641
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaa 329  Q
    |||| ||||||||||  |||| |||||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  38073568 tcatgttaacttgtgcccttagggcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaa 38073641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 35693384 - 35693276
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||  |||| |||||  |||||||| ||||  | ||||||| ||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  35693384 gtccctccatccaaaagttctgttagtggtgatgatgtgtcctcttgcatgtagtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 35693285  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  35693284 taaattgat 35693276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 420
Target Start/End: Original strand, 8421413 - 8421499
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||| |||||| || |||| | |||| |||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||    
T  8421413 aatgagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 8421499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 20884452 - 20884522
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatg 326  Q
    |||| ||||||||||  |||| || ||||||||||||||||||||||||||||||| |||||||| |||||    
T  20884452 tcatgttaacttgtgcccttagggtacatgttaagcattaatttcatttcattaatagtaagaatttaatg 20884522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 334 - 420
Target Start/End: Original strand, 46994657 - 46994743
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||| |||||| ||||||| | ||||||||| ||| |||||| || |||| |||||||||||||||||||| ||| |||||    
T  46994657 aatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccct 46994743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 339 - 420
Target Start/End: Original strand, 46810707 - 46810788
Alignment:
Q  339 gtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||| |||||| ||||||| | ||||||||| | | ||||||||| ||||||||||||||||||||||||| ||| |||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccct 46810788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 1546397 - 1546505
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||   || ||| ||| | ||||||||||||||||||||| || ||||| ||| ||||||| ||||||| |||||||    
T  1546397 gtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggac 1546496  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  1546497 taaattgat 1546505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 4321037 - 4321121
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||| |||||| ||||||| | ||||||||| ||| |||||| || |||||| |||||||||||||||||| ||| |||||    
T  4321037 tgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccct 4321121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 332 - 420
Target Start/End: Original strand, 30108560 - 30108648
Alignment:
Q  332 ttaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||| ||||||| |||||| ||||||| | |||||| || ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  30108560 ttaacgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 30108648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 39859243 - 39859135
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||  | |||||| ||||||||| |||||||||| ||| |||  |||||||||| |||||||    
T  39859243 gtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggac 39859144  T
Q  515 taatttgat 523  Q
    |||||||||    
T  39859143 taatttgat 39859135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 2167479 - 2167562
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||  |||||| ||||   || ||| || ||||||  ||||||||||||||||||||||||||||||||||    
T  2167479 gagtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccct 2167562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 35342425 - 35342508
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| || |||| | |||| | || ||| ||||||||||||||||||||||||||||||||||| ||| |||||    
T  35342425 gagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccct 35342508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 35344414 - 35344331
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || ||||   ||||||||| |||  |||||||| ||||||||||||||||||||||||| ||| |||||    
T  35344414 gagtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccct 35344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 45465275 - 45465192
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||||| |||||| || ||| || ||| || ||||||||||||||||||||||||| ||| |||||    
T  45465275 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccct 45465192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 46812706 - 46812623
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| ||||||||| |||||| ||  || |||||||||  ||||||||||| | |||||||||| |||||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccct 46812623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 6056874 - 6056984
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    |||||| ||||||||| || ||||||||   || ||| |||||| |||||||||  |||||| ||||||||||| | | ||||||||||||| | |||||    
T  6056874 tagtccttccgtccaaatgctccgttagtgctgctgagctgtcgtcctgcatgtcctgttgtattgtacacgtgtctacaaggaagccacgtctacaagg 6056973  T
Q  513 actaatttgat 523  Q
    || ||||||||    
T  6056974 accaatttgat 6056984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 337 - 414
Target Start/End: Original strand, 2492327 - 2492404
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaactta 414  Q
    |||| ||||||||||||||||||  |||||| || ||| || |||| || ||| ||||||||||||||||||||||||    
T  2492327 gagtaaaccatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattatgcgaaatatcaactta 2492404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 13169762 - 13169689
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||||| |  | |||||||||||||||| |||| ||||||||||| | |||||||||    
T  13169762 tcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccct 13169689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 506
Target Start/End: Complemental strand, 37796197 - 37796104
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgt 506  Q
    |||||||||||||||   | |||||||||  || |||| ||||  | |||||||||||||||||| |||||||| |||||||| ||||||||||    
T  37796197 tagtccctccgtccataagctccgttagcgatgctgatgtgtcctcttgcatgttgtgttgtcttctacacgtgtcaagaaggcagccacgtgt 37796104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 462 - 523
Target Start/End: Original strand, 48704337 - 48704398
Alignment:
Q  462 catgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||||| |||||||||| ||| ||||||| ||||||| ||||||| ||||||||    
T  48704337 catgttgtgttgtcgtgtacacgtgtcaacaaggaagtcacgtgtacaaggaccaatttgat 48704398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 3690151 - 3690223
Alignment:
Q  338 agtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||| |||||| ||||||||| |||||| |||| | |||||| || || ||||||||||||||||||||||    
T  3690151 agtgaatcatcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaa 3690223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 6602445 - 6602553
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  ||||    |||||| ||||||||| |||||||||| |||  ||| |||||||||| |||||||    
T  6602445 gtccctccgtccaaaagctccgttagtggtgatgacatgtccttttgcatgctgtgttgtcatgtacacgtgtcaaccaggcagccacgtgtacaaggac 6602544  T
Q  515 taatttgat 523  Q
    |||||||||    
T  6602545 taatttgat 6602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 39854087 - 39854151
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataat 325  Q
    ||||||||||  |||| |||| ||||||||||||||||||||| |||||||||||| ||| ||||    
T  39854087 ttaacttgtgcccttagggcatatgttaagcattaatttcattccattaatggtaaaaatttaat 39854151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 417
Target Start/End: Original strand, 40784346 - 40784426
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtc 417  Q
    |||||||||||||||||||| ||| |||||| ||  ||  || |||||  ||| |||||||||||||||||||||||||||    
T  40784346 gagtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtc 40784426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 34691133 - 34691192
Alignment:
Q  464 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||| |||||||||||||||| ||||||||||||||| || ||| ||| |||||    
T  34691133 tgttgtgttggcttgtacacgtggcaacaaggaagccacgtgtacagggattaaattgat 34691192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 45513092 - 45513151
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    ||||||||||  |||| | ||||||||||||| |||||||||| ||||||||||||||||    
T  45513092 ttaacttgtgcccttaagacacatgttaagcactaatttcattccattaatggtaagaat 45513151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 452 - 526
Target Start/End: Original strand, 31913616 - 31913690
Alignment:
Q  452 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattga 526  Q
    ||||| ||||||||   |||||||||| ||||||| | | ||||||||||||||| ||||||| |||||||||||    
T  31913616 tgtcgtcctgcatggcttgttgtcttgcacacgtgtctacaaggaagccacgtgtacaaggaccaatttgattga 31913690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 21148546 - 21148493
Alignment:
Q  278 ggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||||||||| |||||| || |||| ||||||||||||||| ||||||||||    
T  21148546 ggcacatgttaaacattaactttattttattaatggtaagaatttaatgaaaaa 21148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 21388008 - 21388069
Alignment:
Q  255 atcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaa 316  Q
    ||||| ||||||||||| || ||| ||||||||||||||||| ||| | |||||||||||||    
T  21388008 atcatgttaacttgtgtcctaatgacacatgttaagcattaaattcttgtcattaatggtaa 21388069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 526
Target Start/End: Original strand, 23962468 - 23962525
Alignment:
Q  469 tgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattga 526  Q
    |||||||||||||||||| | | ||||||||||| ||| ||||||| |||||||||||    
T  23962468 tgttgtcttgtacacgtgcctacaaggaagccacatgtacaaggaccaatttgattga 23962525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 337 - 418
Target Start/End: Complemental strand, 38614883 - 38614802
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    ||||||| |||||| | ||||||| |||||| |  ||| || ||||||  |||||||||||||| |||||||||||||||||    
T  38614883 gagtgaatcatcaactacgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtcc 38614802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 13168233 - 13168341
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||| |||||||||  | ||||||||  |||||||  ||||  | |||||| ||||||||| |||||||||| ||| |||  || ||||||| |||||||    
T  13168233 gtccatccgtccaaaagctccgttagtggtgatgacgtgtcatcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagacacgtgtacaaggac 13168332  T
Q  515 taatttgat 523  Q
    |||||||||    
T  13168333 taatttgat 13168341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 45359446 - 45359554
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||  | ||||||||  |||||||  ||||  | |||||| ||||||||| |||||||||  ||| |||| || ||||||| |||||||    
T  45359446 gtccctccatccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtttcaaaaaggcagtcacgtgtacaaggac 45359545  T
Q  515 taatttgat 523  Q
    |||||||||    
T  45359546 taatttgat 45359554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 45463669 - 45463753
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||| ||||||| | ||||||||  ||| ||||||||| |||||| ||||   |||||||||||  ||||||||    
T  45463669 tgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccct 45463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 34776884 - 34776821
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||||||| |||||||||| ||| |||| | |||| ||| |||| |||||||||||    
T  34776884 tgcatgttgtgttgtcatgtacacgtgccaacaaggcaaccacatgtacaagaactaatttgat 34776821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 45463808 - 45463867
Alignment:
Q  464 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  45463808 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 45463867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 8073552 - 8073594
Alignment:
Q  278 ggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||||||||||||||||||| ||||| || |||||||||||||    
T  8073552 ggcacatgttaagcattaatgtcattccactaatggtaagaat 8073594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 16099254 - 16099312
Alignment:
Q  262 taacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    ||||||||| |||||  |||||||||||| |||||| ||||||||||| || |||||||    
T  16099254 taacttgtgctcttagagcacatgttaagtattaatgtcatttcattattgataagaat 16099312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 27666179 - 27666106
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  27666179 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 27666106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 414
Target Start/End: Original strand, 27955370 - 27955447
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaactta 414  Q
    ||||||| |||||||||||||||| |||||| || | |  || |||||  |||||||||| | |||||||||||||||    
T  27955370 gagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaactta 27955447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 35403698 - 35403625
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  35403698 tcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 35403625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 36762763 - 36762698
Alignment:
Q  345 catcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||| ||||||| | |||||| || | | ||||||||| |||||||||||||| ||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaa 36762698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 5e-46; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 415 - 537
Target Start/End: Original strand, 35996173 - 35996295
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||| |||||||||| || |||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35996173 gtccctccgtccaagtgctccgttagccatgctgacatgtcgccatgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 35996272  T
Q  515 taatttgattgatttggaaaaag 537  Q
    |||||||||||| ||||||||||    
T  35996273 taatttgattgaattggaaaaag 35996295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 415 - 539
Target Start/End: Complemental strand, 51041945 - 51041821
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||||| |  ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  51041945 gtccctccatccaagtgctttgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaaggaagccacatgttcaaggac 51041846  T
Q  515 taatttgattgatttggaaaaagtc 539  Q
    |||||||||||| ||||||||||||    
T  51041845 taatttgattgaattggaaaaagtc 51041821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 586 - 797
Target Start/End: Original strand, 2827685 - 2827891
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  ||||||  ||||||||    ||||| || ||||| ||||||||| ||||| |||| ||||||||||| ||||||| |||||     
T  2827685 ccctgcattacccatacctccttctccacatttc----agaaa-atcaaaaacgtccttgacccttcttcttctcgctaaaacttcctccattttcaccc 2827779  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttc 785  Q
    |||||||| ||||| ||||| ||  |||||| ||||||||||||||  |||||||||||||| |||||||||||||||||||| |  ||||||||||||     
T  2827780 ctccaaaatcatcatcatctccggcgattctgacatttttgaagtttgtgtgttcggttgtgattaaaggtaacacctttcctgttgtttatcaagtttt 2827879  T
Q  786 tgtgttcgtatt 797  Q
    ||||||||||||    
T  2827880 tgtgttcgtatt 2827891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 586 - 797
Target Start/End: Original strand, 27625072 - 27625284
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| ||| |||||  ||||||| |||||||| ||| ||||| |||||||||||| |||||||||| ||||||||||||     
T  27625072 ccctgcattacccatacctccttcttcagatttcagtcagaaaaataaaaaacgtcattgacccttctccttcccactaaaactttatccattctcaccc 27625171  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgtggtt---aaaggtaacacctttcctctaatttatcaagt 782  Q
    |||||||| ||||| ||||| ||| |||||| || |||||||||||  |||||||||||||  ||   |||||||||  ||||||| |  ||| ||||||    
T  27625172 ctccaaaatcatcatcatctccgatgattctgacgtttttgaagtttctgtgttcggttgt--ttcaaaaaggtaacgtctttcctgttgtttgtcaagt 27625269  T
Q  783 ttctgtgttcgtatt 797  Q
    || ||||||||||||    
T  27625270 ttatgtgttcgtatt 27625284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 2350521 - 2350395
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgt---cttgtacacgtggcaagaaggaagccacgtgttcaag 511  Q
    ||||||| ||||||||| |||||||||| || |||  |||||| ||||||| ||||||||   |||||||||||||||||||||||||||||||||||||    
T  2350521 gtccctctgtccaagtgctccgttagccatgctgacatgtcgctctgcatgctgtgttgtactcttgtacacgtggcaagaaggaagccacgtgttcaag 2350422  T
Q  512 gactaatttgattgatttggaaaaagt 538  Q
    ||||||||||||||| |||||||||||    
T  2350421 gactaatttgattgaattggaaaaagt 2350395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 415 - 535
Target Start/End: Original strand, 2827514 - 2827634
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||||  |||||||||| || |||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  2827514 gtccctccgtccaagtcctccgttagccttgctgatctgtcgtcttgcatgatgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggac 2827613  T
Q  515 taatttgattgatttggaaaa 535  Q
    |||||||||||| ||| ||||    
T  2827614 taatttgattgaattgaaaaa 2827634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 4519486 - 4519594
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||||||||| || |||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  4519486 gtccctccgtccaaatgctccgttagccatgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggcaaaaagaaagtcacgtgttcaaggac 4519585  T
Q  515 taatttgat 523  Q
    |||||||||    
T  4519586 taatttgat 4519594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 586 - 746
Target Start/End: Complemental strand, 44558334 - 44558174
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacct 685  Q
    ||||||||||||||||  |||||| | |||||||  ||||||| || ||||| ||||||||| |||||||||||| |||||||| | ||||||||||||     
T  44558334 ccctgcattacccatacctccttctttacatttcagtcagaaaaatcaaaaacgtccttgacccttctccttcccactaaaactctatccattctcaccc 44558235  T
Q  686 ctccaaaaccatcaccatcttcgaggattctcacatttttgaagttgttgtgttcggttgt 746  Q
    |||||||| ||||| ||||||||| |||||| || |||||||||||  |||||||||||||    
T  44558234 ctccaaaatcatcatcatcttcgatgattctgacgtttttgaagtttctgtgttcggttgt 44558174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 433 - 538
Target Start/End: Original strand, 47941939 - 47942044
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47941939 tccgttagccatgctgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcaaggacgaatttgattgatttgga 47942038  T
Q  533 aaaagt 538  Q
    ||||||    
T  47942039 aaaagt 47942044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 604 - 794
Target Start/End: Complemental strand, 2350335 - 2350145
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| |||||||||  | |||||||| |||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| | |||    
T  2350335 tccttcttcacatttcagttagaaacatcaaaaacatccttgactcttctccttcccactaaaactttctccattctcacccctccaaaatcataatcat 2350236  T
Q  704 cttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgt 794  Q
    || ||  |||||| || |||||||||||  |||||||   |||| | ||||||||| | |||||| |  ||||||||| ||||||||||||    
T  2350235 ctccggcgattctgacgtttttgaagttcctgtgttcaactgtgatcaaaggtaacgcatttccttttgtttatcaagattctgtgttcgt 2350145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 604 - 705
Target Start/End: Original strand, 4519668 - 4519769
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||||||||||||| ||||||||||| |||||  |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  4519668 tccttcctcacatttcactcagaaacatcaaaaacatccttgacccttcttcttcccgctaaaactttctccattctcacctctccaaaatcatcatcat 4519767  T
Q  704 ct 705  Q
    ||    
T  4519768 ct 4519769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 44558507 - 44558384
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||| |||||||||||| |  ||||||| || ||||||||| || |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  44558507 gtccttccgtccaagtgctatgttagccatgctgatctgtcaccatgcatgctctgttgtcttgtacgcgtggcaagaaggaagccacgtgttcaaggac 44558408  T
Q  515 taatttgattgatttggaaaaagt 538  Q
    | |||||||||| || ||||||||    
T  44558407 tcatttgattgaatttgaaaaagt 44558384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 606 - 792
Target Start/End: Original strand, 10762883 - 10763069
Alignment:
Q  606 cttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    |||| ||||||||  ||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||    
T  10762883 cttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcacccctccaaaatcatcatcatct 10762982  T
Q  706 tcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttc 792  Q
     |   ||||||  | | |||||||||  ||||||||   ||| | ||||||||||||||||||  | ||||||||| ||||||||||    
T  10762983 ccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacctttccttgagtttatcaagattctgtgttc 10763069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 420 - 526
Target Start/End: Original strand, 27624921 - 27625027
Alignment:
Q  420 tccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatt 519  Q
    |||||| ||||| || ||||||| || |||||||||||| |||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  27624921 tccgtcaaagtgctctgttagccatgttgatctgtcgccatgcatgctttgttgtcttgtacgtgtggcaagaaggaagccacgtgttcaaggactaatt 27625020  T
Q  520 tgattga 526  Q
    |||||||    
T  27625021 tgattga 27625027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 604 - 794
Target Start/End: Original strand, 35996363 - 35996553
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| |||||||||  |||||||||| |||||  |  |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| |||    
T  35996363 tccttcttcacatttcagtcagaaacatcaaaaacatatttgactcttctccttcccgctaaaactttctccagtctcacccctccaaaatcatcatcat 35996462  T
Q  704 cttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgttcgt 794  Q
    || ||  |||||| || |||||||||||   ||||||| ||||| | ||||||||  |||||||| |  ||||||||| || ||| |||||    
T  35996463 ctccgccgattctgacgtttttgaagttcccgtgttcgattgtgatcaaaggtaatgcctttccttttgtttatcaagattttgtcttcgt 35996553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 604 - 765
Target Start/End: Complemental strand, 10372500 - 10372339
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| ||||||||  || |||||||| |||||  ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||    
T  10372500 tccttcttcacattttacttagaaacatcaaaaacatccttgactcttctccttcccgctaaaacattctccattgtcacccctccaaaatcatcatcat 10372401  T
Q  704 cttcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacaccttt 765  Q
    || |   ||||||  |||||||||||||  ||||||||  |||| | |||||||||||||||    
T  10372400 ctccatcgattctggcatttttgaagttcctgtgttcgactgtgatcaaaggtaacaccttt 10372339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 433 - 538
Target Start/End: Complemental strand, 44794756 - 44794651
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  ||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  44794756 tccgttagccatgctgacatgtcgccttgcatgctgtgatgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 44794657  T
Q  533 aaaagt 538  Q
    ||||||    
T  44794656 aaaagt 44794651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 44558618 - 44558534
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||| ||||||||| ||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  44558618 tgagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccct 44558534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 433 - 538
Target Start/End: Original strand, 10762709 - 10762814
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  |||||||  ||||| |||| |||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  10762709 tccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 10762808  T
Q  533 aaaagt 538  Q
    ||||||    
T  10762809 aaaagt 10762814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 586 - 716
Target Start/End: Complemental strand, 51041775 - 51041645
Alignment:
Q  586 ccctgcattacccatagttccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttccc-gctaaaactttctccattctcacc 684  Q
    ||||||||||||||||   | ||| ||||||||| ||||||||||| ||||| ||| ||||| |||||||||||| |||||| |||||||||||||||||    
T  51041775 ccctgcattacccatacc-ctttcttcacatttcactcagaaacatcaaaaacgtcattgacccttctccttccccgctaaagctttctccattctcacc 51041677  T
Q  685 tctccaaaaccatcaccatcttcgaggattct 716  Q
     |||||||| ||||| ||||| ||| ||||||    
T  51041676 cctccaaaatcatcatcatctccgacgattct 51041645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 51042055 - 51041973
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    |||||||||| ||||||||||||||||||||| |||||| || ||||||  ||||||||||||| ||||||||||||||||||    
T  51042055 tgagtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagtcc 51041973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 10372833 - 10372757
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||||||||||||||||||||| | |||||||||  || ||||||||| |||||||||||||||||||||||||    
T  10372833 aatgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaa 10372757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 336 - 415
Target Start/End: Original strand, 4519375 - 4519454
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttag 415  Q
    ||||||||| ||||||||||||||| |||||| || |||||||||||||  ||||||||||||||||||||||| |||||    
T  4519375 tgagtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattatgcgaaatatcagcttag 4519454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 604 - 699
Target Start/End: Complemental strand, 44794584 - 44794489
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatca 699  Q
    |||||| ||||||||  ||||||||||| |||||  || |||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||||    
T  44794584 tccttcttcacattttactcagaaacattaaaaacatctttgactcttctccttcccgctaaaacgttctccattgtcacccctccaaaatcatca 44794489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 418
Target Start/End: Original strand, 2827407 - 2827485
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtcc 418  Q
    |||||||||||||||||||||| |||||||||||| || ||||||    |||||||||||||| ||||||||||||||||||    
T  2827407 gagtgaaccatcaaattcgtccctaaattttcacacgtcggccaa---cgtccctcaattatgtgaaatatcaacttagtcc 2827485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 433 - 524
Target Start/End: Complemental strand, 10372702 - 10372611
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgatt 524  Q
    |||||||||| || |||  ||||||| |||||| |||| |||||||||| ||||||||||| ||||||||||||||| |||| |||||||||    
T  10372702 tccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaagaagccacgtgttcagggacgaatttgatt 10372611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 335 - 410
Target Start/End: Original strand, 10762579 - 10762654
Alignment:
Q  335 atgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||||||||||||||||| | |||||||||  || ||||||||| |||||||||||||||||||| ||||    
T  10762579 atgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 10762654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 39923098 - 39923015
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| ||||||| | |||||| |||||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  39923098 gagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 39923015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 53039380 - 53039450
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  53039380 ttaacttgtgtccttagggcatatgttaagcattaatttcatttcattaatggtaaaaatttaataaaaaa 53039450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 2350631 - 2350558
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||||||| || |||| | ||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaa 2350558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 2693222 - 2693159
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||| ||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||    
T  2693222 tgcatgctgtgttgtcctgtacacgtgtcaagaaggcagccacgtgtacaaggactaatttgat 2693159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 22409325 - 22409400
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  ||||  ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||    
T  22409325 tcatgttaacttgtgcccttaatgcacatgttaaacattaatttcattccattaatggtaagaatttaatgaaaaa 22409400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 44794884 - 44794801
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || |||| | |||||||||| || || |||||| ||||||||||||||||||||||||| ||| |||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccct 44794801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 334 - 410
Target Start/End: Original strand, 42879272 - 42879348
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||| |||||| ||||||| | |||||| || ||| |||||| || |||||||||||||||||||||||||    
T  42879272 aatgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaa 42879348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 44992807 - 44992891
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||| |||||| ||||||| | |||||| || ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  44992807 tgagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 44992891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 51012036 - 51012143
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  |||||||  |||| || |||||| |||||||||||||||||||| ||| |||| |||||||||| |||||||    
T  51012036 gtccctccgtccaaaagctctgttagtagtgatgacgtgtc-ccttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggac 51012134  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  51012135 taaattgat 51012143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 38794175 - 38794100
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| ||| |||||||||||||||||||||| ||||||| |||||||| ||||| ||||    
T  38794175 tcatgttaacttgtgcccttagggcccatgttaagcattaatttcattccattaatagtaagaatttaatggaaaa 38794100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 43778389 - 43778472
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| |||||| ||||||||| |||||| || ||| || ||| || ||||||||||||||||||||||||| ||| |||||    
T  43778389 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccct 43778472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 2828502 - 2828429
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| ||||||| | |||||| |  ||| |||||| ||||||||||||||||||||||||||||    
T  2828502 gagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaa 2828429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 10371057 - 10371130
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||||||| || |||| | |||||||||  || ||| ||||| |||||||||||||||||||||||||    
T  10371057 gagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaa 10371130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 462 - 523
Target Start/End: Complemental strand, 11255907 - 11255846
Alignment:
Q  462 catgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||| |||||||||||||||||||| ||| |||| |||||||||| |||||||||| |||||    
T  11255907 catgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgat 11255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 27382270 - 27382335
Alignment:
Q  458 cctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||  || ||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||    
T  27382270 cctgcatgtcatggtgtcttgtacacgtgtcaacaagaaagccacgtgtacaaggactaatttgat 27382335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 39085246 - 39085170
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    |||||||||| |||||| ||||||| | |||||| || ||| || ||| || |||||||||||||||||||||||||    
T  39085246 aatgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaa 39085170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 420
Target Start/End: Original strand, 44792933 - 44793017
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||| || |||||| || |||| | |||| |||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||    
T  44792933 tgagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccct 44793017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 523
Target Start/End: Complemental strand, 48646733 - 48646653
Alignment:
Q  443 gtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||| ||||  | |||||||||||||||| | |||||||| ||| |||| | |||||||| ||||||||||||||||    
T  48646733 gtgatgatgtgtcctcttgcatgttgtgttgtcatttacacgtgtcaacaaggcaaccacgtgtacaaggactaatttgat 48646653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 416
Target Start/End: Complemental strand, 4520542 - 4520463
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagt 416  Q
    ||||||| |||||| ||||||||| |||||| |   || |||||||||  ||| ||||||||||||||||||||||||||    
T  4520542 gagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaacttagt 4520463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 10109398 - 10109323
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||||  ||| |||||||||||| ||||| |||||||||| ||||||||| ||| | ||||||||    
T  10109398 tcatgttaacttgtgtctttagggcacatgttaaacattattttcatttcaataatggtaaaaatttgatgaaaaa 10109323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 20574852 - 20574927
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| |||||||||||| ||||||||||||| |||| || |||||||| ||||| ||||    
T  20574852 tcatgttaacttgtgcccttagggcacatgttaaacattaatttcattccattgatagtaagaatttaatggaaaa 20574927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 444 - 523
Target Start/End: Complemental strand, 26296879 - 26296800
Alignment:
Q  444 tgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||| |||||| | |||||||  |||||||||||||||||| | | ||||||||||||| | ||||||| ||||||||    
T  26296879 tgatgagctgtcgtcttgcatgtcatgttgtcttgtacacgtgtctacaaggaagccacgtatacaaggaccaatttgat 26296800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 27624806 - 27624889
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||  |||| |||| |||| |||||| || |||||| ||||||  ||  ||||||||||||||||||||||||||||||    
T  27624806 gagtgaacggtcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattatgcgaaatatcaacttagtccct 27624889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 333 - 420
Target Start/End: Original strand, 39083635 - 39083722
Alignment:
Q  333 taatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||||||| ||||||| | ||||||||  ||| ||||||||| |||||| ||||   |||||||||||  ||||||||    
T  39083635 taatgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccct 39083722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 47941811 - 47941894
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || |||| | |||||| || ||| || |||||| ||| ||||||||||||||||||||| ||| |||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccct 47941894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 32318689 - 32318619
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||||  |||| |||||||||||||||||||| ||||||||||| || ||| ||| || |||||||    
T  32318689 ttaacttgtgcccttagggcacatgttaagcattaatgtcatttcattagtgttaataatttattgaaaaa 32318619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 42898964 - 42899010
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcat 302  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||||    
T  42898964 tcatcttaacttgtgtccttagggcacatgttaaacattaatttcat 42899010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 523
Target Start/End: Original strand, 50131326 - 50131380
Alignment:
Q  469 tgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||||||||| | | ||||||| ||||||| ||||||||||||||||    
T  50131326 tgttgtcttgtacacgtgtctacaaggaagtcacgtgtacaaggactaatttgat 50131380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 18994592 - 18994661
Alignment:
Q  262 taacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||||||  ||||| ||||||||||| |||||| |||||||| | ||||||||||| || |||||||    
T  18994592 taacttgtgtctttatgacacatgttaagtattaatgtcatttcactgatggtaagaatttattgaaaaa 18994661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 523
Target Start/End: Original strand, 25993653 - 25993714
Alignment:
Q  462 catgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||| |||||||||||||||||||| ||| || |||||||||||| || |||| ||||||||    
T  25993653 catgatgtgttgtcttgtacacgtgtcaacaatgaagccacgtgtacatggaccaatttgat 25993714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 4960373 - 4960409
Alignment:
Q  280 cacatgttaagcattaatttcatttcattaatggtaa 316  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4960373 cacatgttaagcattaatttcattccattaatggtaa 4960409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 10768041 - 10767973
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaat 405  Q
    |||||||||||||| || || | | |||||||||  || ||||||||| ||||||||||||||||||||    
T  10768041 gagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaat 10767973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 42980745 - 42980853
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | || |||||  |||||||| ||||  | |||||||||||||||| |||||||||| ||| |||  || ||||||| ||| |||    
T  42980745 gtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcctgtacacgtgtcaacaagacagtcacgtgtacaaagac 42980844  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  42980845 taaattgat 42980853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 523
Target Start/End: Original strand, 48813925 - 48814005
Alignment:
Q  443 gtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||| ||||  | |||||||||||||||| |||||| |||  || |||| |||||||||| |||||||||| |||||    
T  48813925 gtgatgatgtgtcctcttgcatgttgtgttgtcatgtacatgtgttaacaaggcagccacgtgtacaaggactaaattgat 48814005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 11601829 - 11601888
Alignment:
Q  464 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||| |||||||||| |||||||| |  |||||||  |||||||||||||||    
T  11601829 tgttgtgttgtcatgtacacgtgtcaagaaggcaatcacgtgtataaggactaatttgat 11601888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 26526740 - 26526799
Alignment:
Q  261 ttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||||||||||||||| ||||||| || ||||||||| ||||| ||||||| ||| ||||    
T  26526740 ttaacttgtgttcttaaggcacatatttagcattaatgtcattccattaattgtatgaat 26526799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 30537921 - 30537996
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||||||||   |||| |||||||||||| ||||| ||||||| || ||||||||||||| ||||| ||||    
T  30537921 tcatgttaacttgttcccttagggcacatgttaaacattagtttcattccaataatggtaagaatttaatggaaaa 30537996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 39083777 - 39083836
Alignment:
Q  464 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  39083777 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 39083836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 523
Target Start/End: Original strand, 39189520 - 39189579
Alignment:
Q  464 tgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||| ||||||||||||| || ||| ||||||||||| || ||||||| |||||    
T  39189520 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgat 39189579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 650 - 708
Target Start/End: Original strand, 25993847 - 25993905
Alignment:
Q  650 ttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcg 708  Q
    ||||||||||||| ||||| ||| ||||  |||||||||||||| ||||| ||||||||    
T  25993847 ttctccttcccgccaaaaccttcaccatcttcacctctccaaaatcatcatcatcttcg 25993905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 334 - 420
Target Start/End: Original strand, 39921491 - 39921577
Alignment:
Q  334 aatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||| ||||||| | ||||||||  ||| ||||||||| |||||  ||||   |||||||||||  ||||||||    
T  39921491 aatgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccct 39921577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 415 - 517
Target Start/End: Complemental strand, 41761760 - 41761658
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | | ||||||  |||||||| ||||  | |||||| |||||| || |||||||||| ||| |||| || ||||||| |||||||    
T  41761760 gtccctccgtccaaaagcttcgttagtggtgatgatgtgtcctcttgcatgctgtgttctcatgtacacgtgtcaacaaggcagtcacgtgtacaaggac 41761661  T
Q  515 taa 517  Q
    |||    
T  41761660 taa 41761658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 417
Target Start/End: Original strand, 230475 - 230516
Alignment:
Q  376 ggccaaatttgtccctcaattatgcgaaatatcaacttagtc 417  Q
    ||||||| | ||||||||||||||||||||||||| ||||||    
T  230475 ggccaaaatcgtccctcaattatgcgaaatatcaaattagtc 230516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 4173819 - 4173746
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  4173819 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 4173746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 41761860 - 41761787
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||||| |  | ||||||||| |||||  |||| ||||||||||| | |||||||||    
T  41761860 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccct 41761787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 43507177 - 43507250
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  43507177 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 43507250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Complemental strand, 43508732 - 43508659
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  43508732 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 43508659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 43519434 - 43519507
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| || |||||| |||| ||||||||||||| |||||||||    
T  43519434 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccct 43519507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 47942837 - 47942764
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| || || | | |||| |||| ||| || |||||| |||||||||||||||||||||||||    
T  47942837 gagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaa 47942764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 4e-31; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 433 - 538
Target Start/End: Original strand, 29077456 - 29077561
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  ||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29077456 tccgttagccatgctgacatgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 29077555  T
Q  533 aaaagt 538  Q
    ||||||    
T  29077556 aaaagt 29077561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 433 - 535
Target Start/End: Original strand, 2968267 - 2968369
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    ||||||||||||| |||  ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  2968267 tccgttagccgtgctgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagagacgaatttgattgatttgga 2968366  T
Q  533 aaa 535  Q
    |||    
T  2968367 aaa 2968369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 606 - 791
Target Start/End: Original strand, 29077630 - 29077815
Alignment:
Q  606 cttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    |||| ||||||||  ||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||    
T  29077630 cttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattttcacccctccaaaatcatcatcatct 29077729  T
Q  706 tcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgtt 791  Q
     |   ||||||  | | |||||||||  ||||||||   ||| | ||||||||||||||||||    ||||||||| |||||||||    
T  29077730 ccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacctttccttgtgtttatcaagattctgtgtt 29077815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 460 - 538
Target Start/End: Original strand, 4641510 - 4641588
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  4641510 tgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttggaaaaagt 4641588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 433 - 538
Target Start/End: Original strand, 29112428 - 29112533
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  |||||||  ||||| |||| |||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29112428 tccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 29112527  T
Q  533 aaaagt 538  Q
    ||||||    
T  29112528 aaaagt 29112533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 606 - 791
Target Start/End: Original strand, 29112602 - 29112787
Alignment:
Q  606 cttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatct 705  Q
    |||| ||||||||  || |||||||| |||||  ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||    
T  29112602 cttcttcacattttacttagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcacccctccaaaatcatcatcatct 29112701  T
Q  706 tcgaggattctcacatttttgaagttgttgtgttcggttgtggttaaaggtaacacctttcctctaatttatcaagtttctgtgtt 791  Q
     |   ||||||  | | |||||||||  ||||||||   ||| | ||||||||||||||||||    ||||||||| |||||||||    
T  29112702 ccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacctttccttgtgtttatcaagattctgtgtt 29112787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 3018446 - 3018338
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||||| |||||||| |||||||||| || |||||| ||| | |||||| ||||||||||||||| |||||||||| ||||||||| |||||| ||||    
T  3018446 gtccctccatccaagtgctccgttagccatgttgatctatcgtcttgcatgatgtgttgtcttgtacgcgtggcaagacggaagccacatgttcagggac 3018347  T
Q  515 taatttgat 523  Q
     ||||||||    
T  3018346 gaatttgat 3018338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 604 - 705
Target Start/End: Original strand, 2968425 - 2968526
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| ||||||||  |||||||| || |||||  || |||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||    
T  2968425 tccttcttcacattttactcagaaaaatcaaaaacatcattgactcttctccttcccgctaaaacgttctccattgtcacccctccaaaatcatcatcat 2968524  T
Q  704 ct 705  Q
    ||    
T  2968525 ct 2968526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 604 - 705
Target Start/End: Original strand, 4641655 - 4641756
Alignment:
Q  604 tccttcctcacatttctctcagaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccat 703  Q
    |||||| ||||||||  ||||||||||| |||||  || |||||||||||||||||||||||||| ||||||||| || || |||||||| ||||| |||    
T  4641655 tccttcttcacattttactcagaaacatcaaaaacatctttgactcttctccttcccgctaaaacgttctccattgtcgcccctccaaaatcatcatcat 4641754  T
Q  704 ct 705  Q
    ||    
T  4641755 ct 4641756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 29077318 - 29077401
Alignment:
Q  327 aaaaattaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||||  |||||||||||||||||||||| | |||||||||  || ||||||||| |||||||||||||||||||| ||||    
T  29077318 aaaaattatcgagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 29077401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 10568507 - 10568617
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    ||||||||||||||||  | ||||||||  |||||||| ||||    |||||||||||||||| |||||||||| ||| |||| |||||| ||| |||||    
T  10568507 tagtccctccgtccaaaagctccgttagtggtgatgatgtgtccttttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacatgtacaagg 10568606  T
Q  513 actaatttgat 523  Q
    |||||||||||    
T  10568607 actaatttgat 10568617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 7049867 - 7049975
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | |||||| |  |||||||| ||||  | |||||||||||||||| |||||||||| ||| |||| | |||||||| |||||||    
T  7049867 gtccctccgtccaaaagctccgttcgtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcatccacgtgtacaaggac 7049966  T
Q  515 taatttgat 523  Q
    |||||||||    
T  7049967 taatttgat 7049975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 9398770 - 9398878
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  ||||||||||  |||||||| ||||    |||||||||||||||| |||||||||| ||| |||  |||||||||| |||||||    
T  9398770 gtccctccgtccaaaagttccgttagtggtgatgatgtgtcattttgcatgttgtgttgtcctgtacacgtgtcaacaagacagccacgtgtacaaggac 9398869  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  9398870 taaattgat 9398878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 11355332 - 11355440
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | |||| |||  |||||||  ||||  | |||||||||||||||| |||||||||| ||| |||| |||||||||| |||||||    
T  11355332 gtccctccgtccaaaagctccggtagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggac 11355431  T
Q  515 taatttgat 523  Q
    |||||||||    
T  11355432 taatttgat 11355440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 33972587 - 33972651
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaat 320  Q
    |||| |||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  33972587 tcatgttaacttgtgctcttagagcacatgttaagcattaatttcattccattaatggtaagaat 33972651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 4641355 - 4641438
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || |||| | ||||||||| ||| ||||||||| |||||||||||||| |||||||||| ||| |||||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccct 4641438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 30639611 - 30639684
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||| |||||| ||||||| | ||||||||| ||| ||||||||| ||||||||||||||| |||||||||    
T  30639611 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaa 30639684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 3018541 - 3018473
Alignment:
Q  352 ttcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||| | |||||||||  || |||||| || |||||||||||||||||||||||||||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccct 3018473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 20523476 - 20523584
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  |||| |||||  |||||||| ||||  | ||||||  |||||||| |||||||||| ||| |||| |||||||||| |||||||    
T  20523476 gtccctccgtccaaaagttctgttagtggtgatgatgtgtcttcttgcatgccgtgttgtcctgtacacgtgtcaacaaggcagccacgtgtacaaggac 20523575  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  20523576 taaattgat 20523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 2968139 - 2968222
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || |||| | ||||||||| |||   ||||||| ||||||||||||||||||||||||| ||| |||||    
T  2968139 gagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaatttaatccct 2968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 14338444 - 14338381
Alignment:
Q  460 tgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||| ||||||||| |||||||||| ||| ||||||||||||||| ||||||| ||||||||    
T  14338444 tgcatgatgtgttgtcctgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgat 14338381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 17950561 - 17950644
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| ||| ||| | |||||| || ||| |||||| || ||||||||||||||||||||||||| ||| |||||    
T  17950561 gagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccct 17950644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 29112290 - 29112373
Alignment:
Q  327 aaaaattaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||||  |||||||||||||| || |||| | |||||||||  || ||||||||| |||||||||||||||||||| ||||    
T  29112290 aaaaattatcgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 29112373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 462 - 523
Target Start/End: Original strand, 24662615 - 24662676
Alignment:
Q  462 catgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||| ||||| | ||||||||    
T  24662615 catgttgtgttgtcttgtacacgtgtcaacaaggaagacacgtgtacaagggccaatttgat 24662676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 6899595 - 6899703
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    |||||| |||||||  | ||||||||   ||||||| ||||  | ||||||||||||| || |||||||||| ||| |||| | |||||||| |||||||    
T  6899595 gtcccttcgtccaaaagctccgttagtgttgatgatgtgtcctcttgcatgttgtgttatcatgtacacgtgtcaacaaggcaaccacgtgtacaaggac 6899694  T
Q  515 taatttgat 523  Q
    |||||||||    
T  6899695 taatttgat 6899703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 624 - 731
Target Start/End: Complemental strand, 30641137 - 30641033
Alignment:
Q  624 agaaacataaaaaatgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcaccatcttcgaggattctcacattt 723  Q
    |||||||| ||||| ||||||||| |||||||||||| |||||||||  ||| ||||| || |||||||| ||||| |||||  || |||||| || |||    
T  30641137 agaaacatcaaaaacgtccttgacccttctccttcccactaaaactt--tccgttctcgcccctccaaaatcatcatcatctctga-gattctgacgttt 30641041  T
Q  724 ttgaagtt 731  Q
    ||||||||    
T  30641040 ttgaagtt 30641033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 452 - 523
Target Start/End: Original strand, 30891271 - 30891342
Alignment:
Q  452 tgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||| |||||||||| || |||||||||||||||| ||| ||  ||||||||||| ||||||| ||||||||    
T  30891271 tgtcaccctgcatgtagtcttgtcttgtacacgtgtcaacaaacaagccacgtgtacaaggaccaatttgat 30891342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 273 - 331
Target Start/End: Complemental strand, 8853777 - 8853719
Alignment:
Q  273 cttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| |||| ||||||| ||||||| |||||||||||||||||||||| || |||||||    
T  8853777 cttagggcatatgttaatcattaatgtcatttcattaatggtaagaatttattgaaaaa 8853719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 336 - 410
Target Start/End: Complemental strand, 29114868 - 29114794
Alignment:
Q  336 tgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaa 410  Q
    ||||||||||||||| || |||| | |||||||||  || ||||||||| |||| ||||||||||||||| ||||    
T  29114868 tgagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaa 29114794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 523
Target Start/End: Complemental strand, 25172080 - 25172015
Alignment:
Q  458 cctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||  |||||||||||||||||| ||| ||||||| ||| ||| ||||||| ||||||||    
T  25172080 cctgcatgtcatgttgtcttgtacacgtgtcaacaaggaagtcacatgtacaaggaccaatttgat 25172015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 332 - 420
Target Start/End: Complemental strand, 17952171 - 17952083
Alignment:
Q  332 ttaatgagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    ||||||||||||||||||| ||||||| | ||||||||  ||| ||||||||| |||||  ||||   |||||||||||  ||||||||    
T  17952171 ttaatgagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccct 17952083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 538
Target Start/End: Complemental strand, 30641271 - 30641220
Alignment:
Q  487 gcaagaaggaagccacgtgttcaaggactaatttgattgatttggaaaaagt 538  Q
    |||||||| ||||||| ||||| ||||||||||||||||| || ||||||||    
T  30641271 gcaagaagaaagccacatgttcgaggactaatttgattgaatttgaaaaagt 30641220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 32439105 - 32439015
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgt 506  Q
    ||||||||||||||  | || |||||  |||||||  |||| || |||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  32439105 gtccctccgtccaaaagatctgttagtagtgatgacgtgtc-ccttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgt 32439015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 62; Significance: 3e-26; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 433 - 538
Target Start/End: Complemental strand, 6630 - 6525
Alignment:
Q  433 tccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgattgatttgga 532  Q
    |||||||||| || |||  |||| || |||||| |||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  6630 tccgttagccatgctgacatgtcaccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgattgatttgga 6531  T
Q  533 aaaagt 538  Q
    ||||||    
T  6530 aaaagt 6525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 337 - 420
Target Start/End: Complemental strand, 6758 - 6675
Alignment:
Q  337 gagtgaaccatcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| || |||| | ||||||||| ||| ||||||||| |||||||||||||| |||||||||| ||| |||||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccct 6675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 526
Target Start/End: Original strand, 4567 - 4680
Alignment:
Q  413 tagtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaagg 512  Q
    |||||| ||||||||| ||||| |||||   || |||  ||||| ||||||||   |||||||||||||||||| | | ||||||||||||||| |||||    
T  4567 tagtccttccgtccaaatgttctgttagtgttgctgagttgtcgtcctgcatggcttgttgtcttgtacacgtgtctacaaggaagccacgtgtacaagg 4666  T
Q  513 actaatttgattga 526  Q
    || |||||||||||    
T  4667 accaatttgattga 4680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 37679 - 37631
Alignment:
Q  283 atgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    ||||||| ||||||||||||||||||||||| || ||| ||||||||||    
T  37679 atgttaaacattaatttcatttcattaatggaaataatttaatgaaaaa 37631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 523
Target Start/End: Original strand, 1373 - 1480
Alignment:
Q  415 gtccctccgtccaagtgttccgttagccgtgatgatctgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 514  Q
    ||||||||||||||  | ||||||||  |||||||  | || || |||||| |||||||||||||||||||| ||| |||| | |||||||| |||||||    
T  1373 gtccctccgtccaaaagctccgttagtggtgatgacgtatc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcaaccacgtgtacaaggac 1471  T
Q  515 taatttgat 523  Q
    ||| |||||    
T  1472 taaattgat 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 260290 - 260365
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||| ||||||||||  |||| ||  |||||||||||||||| ||||| |||||||||||||||| || |||||||    
T  260290 tcatgttaacttgtgcccttagggtccatgttaagcattaatgtcattccattaatggtaagaatttattgaaaaa 260365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 36353 - 36402
Alignment:
Q  282 catgttaagcattaatttcatttcattaatggtaagaatataatgaaaaa 331  Q
    |||||||||||||| ||||||| || ||||||||||||| ||||||||||    
T  36353 catgttaagcattattttcattccaataatggtaagaatttaatgaaaaa 36402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 3304 - 3377
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| ||||||||| |||| ||||||||||||| |||||||||    
T  3304 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccct 3377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 4476 - 4549
Alignment:
Q  347 tcaaattcgtccttaaattttcacaggttggccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||||||||| |||||| | |  | |||||| ||||||||| |||| ||||||||||||| |||||||||    
T  4476 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccct 4549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 467 - 523
Target Start/End: Original strand, 8422 - 8478
Alignment:
Q  467 tgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    |||||||||||||||||||| ||| |||| |||||||||| |||| ||||| |||||    
T  8422 tgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaagtactaaattgat 8478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 21412 - 21356
Alignment:
Q  256 tcatcttaacttgtgttcttatggcacatgttaagcattaatttcatttcattaatg 312  Q
    |||| |||||||||||  ||| |||||||||||||||||||| |||||| |||||||    
T  21412 tcatattaacttgtgtctttagggcacatgttaagcattaatgtcattttattaatg 21356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 37362 - 37422
Alignment:
Q  463 atgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 523  Q
    ||||||||||||| | |||||||| ||| |||| | |||||||| ||||||||||||||||    
T  37362 atgttgtgttgtcctttacacgtgtcaacaaggcaaccacgtgtacaaggactaatttgat 37422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 2139 - 2181
Alignment:
Q  378 ccaaatttgtccctcaattatgcgaaatatcaacttagtccct 420  Q
    |||||||  |||||||||||||||||||||||||||| |||||    
T  2139 ccaaattcatccctcaattatgcgaaatatcaacttaatccct 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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