View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3090_low_20 (Length: 463)

Name: NF3090_low_20
Description: NF3090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3090_low_20
NF3090_low_20
[»] chr4 (6 HSPs)
chr4 (258-445)||(55911081-55911268)
chr4 (11-165)||(55911361-55911515)
chr4 (28-141)||(2588236-2588349)
chr4 (26-141)||(16497453-16497568)
chr4 (26-141)||(49577305-49577420)
chr4 (26-141)||(4289822-4289937)
[»] chr2 (7 HSPs)
chr2 (27-165)||(42975601-42975738)
chr2 (26-134)||(950489-950597)
chr2 (22-141)||(40712522-40712641)
chr2 (27-141)||(44673412-44673526)
chr2 (25-98)||(11861685-11861758)
chr2 (93-141)||(36536192-36536240)
chr2 (26-132)||(25438549-25438655)
[»] chr1 (6 HSPs)
chr1 (27-140)||(50204752-50204865)
chr1 (264-344)||(50204520-50204601)
chr1 (266-343)||(33966640-33966718)
chr1 (27-141)||(47523918-47524032)
chr1 (297-345)||(43866279-43866327)
chr1 (49-110)||(36826060-36826121)
[»] chr8 (7 HSPs)
chr8 (26-165)||(36881725-36881862)
chr8 (27-141)||(34784243-34784357)
chr8 (26-141)||(29168251-29168366)
chr8 (28-141)||(1548388-1548501)
chr8 (93-141)||(3376140-3376188)
chr8 (308-343)||(1468977-1469012)
chr8 (27-141)||(3117954-3118068)
[»] chr7 (10 HSPs)
chr7 (26-141)||(19780831-19780946)
chr7 (25-141)||(12858968-12859084)
chr7 (26-130)||(23636900-23637004)
chr7 (264-345)||(23636689-23636771)
chr7 (264-346)||(19781096-19781179)
chr7 (26-141)||(32775415-32775530)
chr7 (264-345)||(32368110-32368192)
chr7 (96-134)||(32368239-32368277)
chr7 (25-74)||(32368285-32368334)
chr7 (25-141)||(36167471-36167587)
[»] chr5 (9 HSPs)
chr5 (25-126)||(14284140-14284241)
chr5 (26-150)||(41106764-41106888)
chr5 (264-344)||(41377832-41377913)
chr5 (93-165)||(41377642-41377712)
chr5 (26-141)||(7992131-7992246)
chr5 (264-342)||(43281146-43281225)
chr5 (264-330)||(15400887-15400954)
chr5 (264-340)||(14284386-14284463)
chr5 (309-341)||(15402543-15402575)
[»] chr6 (5 HSPs)
chr6 (26-141)||(13425442-13425557)
chr6 (93-139)||(18133713-18133759)
chr6 (295-340)||(6539540-6539585)
chr6 (308-344)||(23890013-23890049)
chr6 (107-143)||(25100861-25100897)
[»] chr3 (4 HSPs)
chr3 (26-141)||(53208429-53208544)
chr3 (26-141)||(7323087-7323202)
chr3 (94-141)||(9454867-9454914)
chr3 (28-141)||(32130407-32130520)
[»] scaffold0768 (1 HSPs)
scaffold0768 (26-165)||(4412-4548)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 258 - 445
Target Start/End: Complemental strand, 55911268 - 55911081
Alignment:
Q  258 ttgacttaaagtcaaagcacgattgaggtgccgtggatgtaggatcatatgatcctacgaaccagcactcgatcttgactacaatggtcaggggatagtg 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55911268 ttgacttaaagtcaaagcacgattgaggtgccgtggatgtaggatcgtatgatcctacgaaccagcactcgatcttgactacaatggtcaggggatagtg 55911169  T
Q  358 ctcatatatttcacttaggatgtgcggagggaaaattttcattaaaaatatgttactaggaaaatcgaacgttgttatgtctttgatc 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55911168 ctcatatatttcacttaggatgtgcggagggaaaattttcattaaaaatatgttactaggaaaatcgaacgttgttatgtctttgatc 55911081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 55911515 - 55911361
Alignment:
Q  11 cacagaggtcaggggcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55911515 cacaaaggtcaggggcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataag 55911416  T
Q  111 taggatcggtaggttgttgatagatttgagaaaataaaaccagaggaaatagagg 165  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  55911415 taggatcggtaggttgttgatagagttgagaaaataaaaccagagaaaatagagg 55911361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 141
Target Start/End: Original strand, 2588236 - 2588349
Alignment:
Q  28 atgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttgt 127  Q
    |||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||||    
T  2588236 atgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttgt 2588335  T
Q  128 tgatagatttgaga 141  Q
    ||||||| ||||||    
T  2588336 tgatagaattgaga 2588349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 16497453 - 16497568
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||    
T  16497453 caatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggtt 16497552  T
Q  126 gttgatagatttgaga 141  Q
    || |||||| ||||||    
T  16497553 gtcgatagaattgaga 16497568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 49577305 - 49577420
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    ||||||||||| | ||||| | ||| ||||||| ||| ||| ||||||| |   |||||| | ||  ||||||||  || ||||||||||||||||||||    
T  49577305 caatgtagtcatgatcgagatcctacgtaggatcggtcggccggtgaaagaatgtaaacacgaggaacgtaacacagttcataagtaggatcggtaggtt 49577404  T
Q  126 gttgatagatttgaga 141  Q
    ||||||||| ||||||    
T  49577405 gttgatagagttgaga 49577420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 4289822 - 4289937
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    ||||||||||||  ||||| | ||| ||||||| ||| ||| | ||||| | | |||||| | ||  |||||| || ||  |||||||||||||||||||    
T  4289822 caatgtagtcagtatcgagatcctacgtaggatcggttggccgttgaaagaacttaaacacgaggaacgtaacccggttcgtaagtaggatcggtaggtt 4289921  T
Q  126 gttgatagatttgaga 141  Q
    ||||||||| ||||||    
T  4289922 gttgatagagttgaga 4289937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 4e-39; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 42975601 - 42975738
Alignment:
Q  27 aatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttg 126  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||| ||  |||||| | ||||||||||||||||||||||||||||||||||||||    
T  42975601 aatgtagtcaggttagagtttttaagtaggattggtaggctggtaaaagattgtaaacacgagggtcgtaacacgatttataagtaggatcggtaggttg 42975700  T
Q  127 ttgatagatttgagaaaataaaaccagaggaaatagagg 165  Q
    |||||||| |||||| || |||| ||||| |||||||||    
T  42975701 ttgatagagttgagagaa-aaaaacagagaaaatagagg 42975738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 950489 - 950597
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| ||  |||  ||||| | |||||||||||| |||  |||||||||| ||||||||    
T  950489 caatgtagtcaggttcaagtttttaagtaggatcggtaggctggtaaatgatcgcaaacacgagggtcgtaacacaattcgtaagtaggattggtaggtt 950588  T
Q  126 gttgataga 134  Q
    |||||||||    
T  950589 gttgataga 950597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 40712522 - 40712641
Alignment:
Q  22 ggggcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggta 121  Q
    |||||||||||||||||||| ||||| ||||| | || |||||||| || ||| ||| |||||| | ||||| || |||| |   |||||||||| ||||    
T  40712522 ggggcaatgtagtcaggttcaagtttttaagtggaatcggtaggctcgtaaaagatcgtaaacacgagggtcatagcacggtccgtaagtaggattggta 40712621  T
Q  122 ggttgttgatagatttgaga 141  Q
    |||| |||||||| ||||||    
T  40712622 ggtttttgatagagttgaga 40712641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 44673526 - 44673412
Alignment:
Q  27 aatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttg 126  Q
    ||||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| |||||||    
T  44673526 aatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 44673427  T
Q  127 ttgatagatttgaga 141  Q
    |||||||| ||||||    
T  44673426 ttgatagaattgaga 44673412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 11861758 - 11861685
Alignment:
Q  25 gcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaac 98  Q
    |||||||||||||| ||||| || ||||||||| |||||||||||||||| ||| || ||| | ||||||||||    
T  11861758 gcaatgtagtcagggtcgagattttaagtaggactggtaggctggtgaaagatcgtagacacgagggtcgtaac 11861685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 36536192 - 36536240
Alignment:
Q  93 cgtaacacgatttataagtaggatcggtaggttgttgatagatttgaga 141  Q
    ||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  36536192 cgtaacacggtttgtaagtaggatcggtaggttgttgatagagttgaga 36536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 25438655 - 25438549
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||    
T  25438655 caatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggtt 25438556  T
Q  126 gttgata 132  Q
    || ||||    
T  25438555 gtcgata 25438549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 50204865 - 50204752
Alignment:
Q  27 aatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttg 126  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| ||  |||||||| ||||||||||||| ||  |||||| |||| ||||||||    
T  50204865 aatgtagtcaggttcgagtttttaagtaggatcggtaggctggtgaaagattgtaaacatgagggtcgtaacacgcttcgtaagtaagatcagtaggttg 50204766  T
Q  127 ttgatagatttgag 140  Q
    |||||||| |||||    
T  50204765 ttgatagagttgag 50204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 50204601 - 50204520
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgtggat-gtaggatcatatgatcctacgaaccagcactcgatcttgactacaatgg 344  Q
    ||||||| ||||||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  50204601 taaagtcgaagcacgattgaggtgctgtggaacgtaggatcatacgatcctacgaaccagcactcgatcctgactacaatgg 50204520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 343
Target Start/End: Complemental strand, 33966718 - 33966640
Alignment:
Q  266 aagtcaaagcacgattgaggtgccgtgg-atgtaggatcatatgatcctacgaaccagcactcgatcttgactacaatg 343  Q
    ||||||||||||| |||||||||||||| | |||| ||| || |||||||||| ||||||||||||| || ||||||||    
T  33966718 aagtcaaagcacggttgaggtgccgtggcacgtagaatcgtaagatcctacgagccagcactcgatcctggctacaatg 33966640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 47524032 - 47523918
Alignment:
Q  27 aatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttg 126  Q
    |||||||||||| ||||| | ||| ||||||| ||| ||| ||||||| | | ||||||   ||  ||||||||| ||  ||||||||||||||||||||    
T  47524032 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 47523933  T
Q  127 ttgatagatttgaga 141  Q
    |||||||| ||||||    
T  47523932 ttgatagagttgaga 47523918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 43866327 - 43866279
Alignment:
Q  297 taggatcatatgatcctacgaaccagcactcgatcttgactacaatggt 345  Q
    ||||||| || |||||||||||||||||||||||| |||||||||||||    
T  43866327 taggatcgtaagatcctacgaaccagcactcgatcctgactacaatggt 43866279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 36826060 - 36826121
Alignment:
Q  49 taagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataag 110  Q
    ||||||||| ||| |||||| ||||| |||||||||||| ||||| ||||||||||| ||||    
T  36826060 taagtaggagtggcaggctgttgaaagatcataaacatgagggtcttaacacgatttgtaag 36826121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 36881862 - 36881725
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||||| ||||| |||||||||| || |||||||||||| ||| |||||  |  ||| |||||||||||  ||||||||| |||| ||||    
T  36881862 caatgtagtcaggttcaagtttttaagtaggatcggcaggctggtgaaagatcgtaaacgcgaaggttgtaacacgattcgtaagtaggaccggttggtt 36881763  T
Q  126 gttgatagatttgagaaaataaaaccagaggaaatagagg 165  Q
    ||||||||||||||||||  |||| ||||| |||||||||    
T  36881762 gttgatagatttgagaaa--aaaagcagagaaaatagagg 36881725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 34784243 - 34784357
Alignment:
Q  27 aatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttg 126  Q
    ||||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | |||||||| | ||  ||||||||| ||| |||||||||||| |||||||    
T  34784243 aatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacataaacacgaggaacgtaacacggtttgtaagtaggatcgttaggttg 34784342  T
Q  127 ttgatagatttgaga 141  Q
    | |||||| ||||||    
T  34784343 tcgatagaattgaga 34784357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 29168251 - 29168366
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    ||||||||||||| | ||| | |||  |||||| ||| ||| ||||||| | | |||||||| ||  ||||||||| ||  |||||||||||||||||||    
T  29168251 caatgtagtcaggatagagatcctacataggatcggtcggccggtgaaagaacgtaaacatgaggaacgtaacacggttcgtaagtaggatcggtaggtt 29168350  T
Q  126 gttgatagatttgaga 141  Q
    ||||||||| ||||||    
T  29168351 gttgatagagttgaga 29168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 1548501 - 1548388
Alignment:
Q  28 atgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttgt 127  Q
    |||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||||    
T  1548501 atgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttgt 1548402  T
Q  128 tgatagatttgaga 141  Q
    ||||||| ||||||    
T  1548401 tgatagaattgaga 1548388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 3376140 - 3376188
Alignment:
Q  93 cgtaacacgatttataagtaggatcggtaggttgttgatagatttgaga 141  Q
    ||||||||| ||  |||||||||||||||||||||||||||| ||||||    
T  3376140 cgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgaga 3376188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 343
Target Start/End: Complemental strand, 1469012 - 1468977
Alignment:
Q  308 gatcctacgaaccagcactcgatcttgactacaatg 343  Q
    |||||||||||||||||||||||| |||||||||||    
T  1469012 gatcctacgaaccagcactcgatcctgactacaatg 1468977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 3118068 - 3117954
Alignment:
Q  27 aatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttg 126  Q
    ||||||||||||  |||||| |||  |||||||||| ||| ||||||| | | |||||| | ||  ||||||| | ||  |||||||||||| |||||||    
T  3118068 aatgtagtcaggaacgagttcctacataggattggtcggccggtgaaagaacgtaaacacgaggaacgtaacatggttcgtaagtaggatcgataggttg 3117969  T
Q  127 ttgatagatttgaga 141  Q
    | |||||| ||||||    
T  3117968 tagatagaattgaga 3117954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 19780831 - 19780946
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||||||||||| |||||| |||  |||||||||||||| ||| |||||| | ||||| ||||||||||  |||||||||| ||||| ||    
T  19780831 caatgtagtcaggttcgagtttttaagtatgatcagtaggctggtgaaagatcgtaaacacgagggtcttaacacgattcgtaagtaggataggtagctt 19780930  T
Q  126 gttgatagatttgaga 141  Q
    ||||||||| ||||||    
T  19780931 gttgatagagttgaga 19780946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 12858968 - 12859084
Alignment:
Q  25 gcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggt 124  Q
    ||||||||||||||  |||||| ||| |||| || ||| ||| ||||||| | | |||||||| ||  ||||||||| ||  |||||||||||| |||||    
T  12858968 gcaatgtagtcaggaacgagttcctacgtagcatcggtcggccggtgaaagaacgtaaacatgaggaacgtaacacggttcgtaagtaggatcgataggt 12859067  T
Q  125 tgttgatagatttgaga 141  Q
    |||||||||| ||||||    
T  12859068 tgttgatagaattgaga 12859084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 23637004 - 23636900
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||||||||||| |||||||||| ||||| | ||| ||| ||| ||||   | |||| ||||||| |||   |||||||||| |||||||    
T  23637004 caatgtagtcaggttcgagtttttaagtaggatcggtagaccggtaaaagatcgtaaatgcgagggttgtaacacaattcgcaagtaggatcagtaggtt 23636905  T
Q  126 gttga 130  Q
    |||||    
T  23636904 gttga 23636900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 23636771 - 23636689
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgt-ggatgtaggatcatatgatcctacgaaccagcactcgatcttgactacaatggt 345  Q
    ||||||| |||||||||||||||||||| ||| ||   ||  || || ||||||||||||||||||||| |||||||||||||    
T  23636771 taaagtcgaagcacgattgaggtgccgttggacgtcaaattgtacgaacctacgaaccagcactcgatcctgactacaatggt 23636689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 19781096 - 19781179
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgt-ggatgtaggatcatatgatcctacgaaccagcactcgatcttgactacaatggtc 346  Q
    |||||||  ||||| ||||||||| ||| |||||||||||| ||  || |||| |||||||||||| || ||||||||||||||    
T  19781096 taaagtcggagcacaattgaggtgtcgttggatgtaggatcgtactattctacaaaccagcactcgttcctgactacaatggtc 19781179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 32775530 - 32775415
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||  |||||| ||  ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||    
T  32775530 caatgtagtcaggaacgagttcctgcgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggtt 32775431  T
Q  126 gttgatagatttgaga 141  Q
    || |||||| ||||||    
T  32775430 gtcgatagaattgaga 32775415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 32368192 - 32368110
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgtgg-atgtaggatcatatgatcctacgaaccagcactcgatcttgactacaatggt 345  Q
    ||||||| ||||||  ||||| |||||||| | ||||| || || |||||||||||||||||||||| |  ||||||||||||    
T  32368192 taaagtcgaagcacagttgagatgccgtgggacgtagggtcgtacgatcctacgaaccagcactcgacccggactacaatggt 32368110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 32368277 - 32368239
Alignment:
Q  96 aacacgatttataagtaggatcggtaggttgttgataga 134  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  32368277 aacacgattcataagtaggatcagtaggttgttgataga 32368239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 32368334 - 32368285
Alignment:
Q  25 gcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaa 74  Q
    |||||||||||||||| |||||| |||||| |||  ||||||||||||||    
T  32368334 gcaatgtagtcaggtttgagtttttaagtacgatcagtaggctggtgaaa 32368285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 36167471 - 36167587
Alignment:
Q  25 gcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggt 124  Q
    ||||||||||||||  |||||| ||| ||||||| ||| ||| ||||||| |   |||||| | ||  ||||||||| ||  |||||||||| | |||||    
T  36167471 gcaatgtagtcaggaacgagttcctacgtaggatcggttggccggtgaaagaatgtaaacacgaggaacgtaacacggttcgtaagtaggattgataggt 36167570  T
Q  125 tgttgatagatttgaga 141  Q
    ||| |||||| ||||||    
T  36167571 tgtcgatagaattgaga 36167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 8e-22; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 14284140 - 14284241
Alignment:
Q  25 gcaatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggt 124  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||| |||  ||||||||| |||||| ||||||||||||  ||||||||  |||||||    
T  14284140 gcaatgtagtcaggttcgagtttttaagttagattggtaggctggtcaaagttcataaacacgtgggttgtaacacgatttggaagtaggaatggtaggt 14284239  T
Q  125 tg 126  Q
    ||    
T  14284240 tg 14284241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 41106888 - 41106764
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    ||||||||||||||| | |||| ||||||||||  |||||||||||||| ||  ||||||   ||| | ||||||||||  ||||||||||| |||||||    
T  41106888 caatgtagtcaggtttgtgtttataagtaggatcagtaggctggtgaaagattgtaaacacaagggccataacacgattcgtaagtaggatccgtaggtt 41106789  T
Q  126 gttgatagatttgagaaaataaaac 150  Q
    ||||||||| ||||||||| |||||    
T  41106788 gttgatagagttgagaaaaaaaaac 41106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 41377832 - 41377913
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgt-ggatgtaggatcatatgatcctacgaaccagcactcgatcttgactacaatgg 344  Q
    ||||||| |||||||||||||||||||| ||| |||||||| || |||||||| ||||||| ||| ||| ||||||||||||    
T  41377832 taaagtcgaagcacgattgaggtgccgtgggaagtaggatcgtacgatcctacaaaccagctctcaatcctgactacaatgg 41377913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 41377642 - 41377712
Alignment:
Q  93 cgtaacacgatttataagtaggatcggtaggttgttgatagatttgagaaaataaaaccagaggaaatagagg 165  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||| |  |||| ||||| |||||||||    
T  41377642 cgtaacacgatttgtaagtaggattggtaggttgttgatagagttgagaga--aaaaacagagaaaatagagg 41377712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 7992131 - 7992246
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    ||||||||||| |  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||    
T  7992131 caatgtagtcatgaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggtt 7992230  T
Q  126 gttgatagatttgaga 141  Q
    ||||||||| ||||||    
T  7992231 gttgatagaattgaga 7992246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 43281146 - 43281225
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgt-ggatgtaggatcatatgatcctacgaaccagcactcgatcttgactacaat 342  Q
    ||||||| ||||| |||||||||||||| |||||||| ||| || ||||||| ||||||||||  |||| ||||||||||    
T  43281146 taaagtcgaagcatgattgaggtgccgtgggatgtagaatcgtacgatcctatgaaccagcacgagatcctgactacaat 43281225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 15400887 - 15400954
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgtgg-atgtaggatcatatgatcctacgaaccagcactcgat 330  Q
    ||||||| ||| ||||||||||||||| || | |||||||| || | |||||||||||||||||||||    
T  15400887 taaagtcgaagtacgattgaggtgccgcgggacgtaggatcgtacggtcctacgaaccagcactcgat 15400954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 14284386 - 14284463
Alignment:
Q  264 taaagtcaaagcacgattgaggtgccgt-ggatgtaggatcatatgatcctacgaaccagcactcgatcttgactaca 340  Q
    |||||||||||||||||| ||||||||| ||| || ||||| || |||||||| |||||  |||||||| ||| ||||    
T  14284386 taaagtcaaagcacgattaaggtgccgtgggacgtgggatcgtacgatcctacaaaccattactcgatcctgagtaca 14284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 15402543 - 15402575
Alignment:
Q  309 atcctacgaaccagcactcgatcttgactacaa 341  Q
    ||||||||||||||||||||||| |||||||||    
T  15402543 atcctacgaaccagcactcgatcctgactacaa 15402575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 13425442 - 13425557
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||    
T  13425442 caatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggtt 13425541  T
Q  126 gttgatagatttgaga 141  Q
    ||||||||| ||||||    
T  13425542 gttgatagaattgaga 13425557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 18133713 - 18133759
Alignment:
Q  93 cgtaacacgatttataagtaggatcggtaggttgttgatagatttga 139  Q
    ||||||||| || |||||||||||||||||||| |||||||| ||||    
T  18133713 cgtaacacggttcataagtaggatcggtaggtttttgatagagttga 18133759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 6539540 - 6539585
Alignment:
Q  295 tgtaggatcatatgatcctacgaaccagcactcgatcttgactaca 340  Q
    |||||||||||| |||||||||| ||||||||||||| | ||||||    
T  6539540 tgtaggatcatacgatcctacgatccagcactcgatccttactaca 6539585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 23890013 - 23890049
Alignment:
Q  308 gatcctacgaaccagcactcgatcttgactacaatgg 344  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  23890013 gatcctacgagccagcactcgatcctgactacaatgg 23890049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 25100861 - 25100897
Alignment:
Q  107 taagtaggatcggtaggttgttgatagatttgagaaa 143  Q
    |||||||||||||||||||||||||||  ||||||||    
T  25100861 taagtaggatcggtaggttgttgatagtattgagaaa 25100897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 53208429 - 53208544
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||  |||||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| || ||||||||||||| ||||||    
T  53208429 caatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcataagtaggatcgataggtt 53208528  T
Q  126 gttgatagatttgaga 141  Q
    || |||||| ||||||    
T  53208529 gtcgatagaattgaga 53208544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 7323202 - 7323087
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||  | |||| ||| ||||||| ||| ||| ||||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||    
T  7323202 caatgtagtcaggaacaagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggtt 7323103  T
Q  126 gttgatagatttgaga 141  Q
    || |||||| ||||||    
T  7323102 gtcgatagaattgaga 7323087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 9454914 - 9454867
Alignment:
Q  94 gtaacacgatttataagtaggatcggtaggttgttgatagatttgaga 141  Q
    |||||||| ||  |||||||||||||||||||||||||||| ||||||    
T  9454914 gtaacacggttcgtaagtaggatcggtaggttgttgatagaattgaga 9454867  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 32130520 - 32130407
Alignment:
Q  28 atgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttgt 127  Q
    |||||||||||  |||||| ||| ||||||| ||| ||| | ||||| | | |||||| | ||  ||||||||| ||  |||||||||||| ||||||||    
T  32130520 atgtagtcaggaacgagttcctacgtaggatcggtcggccgatgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttgt 32130421  T
Q  128 tgatagatttgaga 141  Q
     |||||| ||||||    
T  32130420 cgatagaattgaga 32130407  T

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Target: scaffold0768 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 4548 - 4412
Alignment:
Q  26 caatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggtt 125  Q
    |||||||||||||||||||| | || |||||||  ||||| ||||  || ||  |||||| | ||||||||||||  ||  |||||||||||| |||| |    
T  4548 caatgtagtcaggttcgagtctttatgtaggatctgtaggttggttgaagattgtaaacacgagggtcgtaacacagttcgtaagtaggatcgatagg-t 4450  T
Q  126 gttgatagatttgagaaaataaaaccagaggaaatagagg 165  Q
    ||||||||| |||||| |  |||| ||||| |||||||||    
T  4449 gttgatagagttgagaga--aaaaacagagaaaatagagg 4412  T

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