View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3092_low_15 (Length: 221)
Name: NF3092_low_15
Description: NF3092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3092_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 15096702 - 15096881
Alignment:
| Q |
17 |
catagggacagtatacatcatactagttgtctgaatcaaaatcccagtagcagcaacagccaatgtaggattctccaaataaccagccaaaacagtaaca |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15096702 |
catagggacagtatacatcatactagttgtctgaatcaaaatcccagtagcagcaacagccaatgtaggattctccaaataaccagccaaaacagtaaca |
15096801 |
T |
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| Q |
117 |
atctcataccaccaccattccaaacatatcataagacaactaggtacagccaatttcatcaactcccccaaaccttcact |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15096802 |
atctcataccaccaccattccaaacatatcataagacaactaggtacagccaatttcatcaactcccccaaaccttcact |
15096881 |
T |
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