View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3092_low_16 (Length: 219)
Name: NF3092_low_16
Description: NF3092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3092_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 32899542 - 32899343
Alignment:
| Q |
13 |
agcacagatataacataacaagctacgtaatataaatatactcttttcaattttgaacaaattaacaatgtgcaaaaatactaagtacagacctcaagaa |
112 |
Q |
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| T |
32899542 |
agcacagatataacataacaagctacgtaatataaatatactctattcaattttgaacaaattaacaatgtgcaaaaataccaagtacagatctcaagaa |
32899443 |
T |
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| Q |
113 |
c--------taaagagcatgcatggtaacaaggaaatgaaaatgtgtagtacgtatataccttaggaattgttggtattagttttgtaacgaggaaaagg |
204 |
Q |
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| T |
32899442 |
catgttaactaaagagcatgcatggtaacaaggaaatgaaaatgtgtagcacgtatataccttaggaattgttggtattagttttgtaacgaggaaaagg |
32899343 |
T |
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