View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3092_low_3 (Length: 507)

Name: NF3092_low_3
Description: NF3092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3092_low_3
NF3092_low_3
[»] chr2 (30 HSPs)
chr2 (298-407)||(9173130-9173243)
chr2 (399-475)||(9172903-9172979)
chr2 (39-151)||(3249770-3249882)
chr2 (47-151)||(3249561-3249665)
chr2 (41-151)||(28612206-28612316)
chr2 (39-150)||(11736325-11736436)
chr2 (41-151)||(28611781-28611891)
chr2 (45-146)||(5001676-5001777)
chr2 (41-151)||(10129470-10129580)
chr2 (74-151)||(11735932-11736009)
chr2 (74-151)||(12898046-12898123)
chr2 (41-146)||(41995726-41995831)
chr2 (41-151)||(5001494-5001604)
chr2 (41-151)||(28612630-28612739)
chr2 (80-151)||(5013208-5013279)
chr2 (47-151)||(6348095-6348199)
chr2 (167-235)||(9173306-9173374)
chr2 (42-151)||(28612842-28612952)
chr2 (41-151)||(44256496-44256606)
chr2 (76-146)||(12896434-12896504)
chr2 (41-131)||(6347936-6348025)
chr2 (74-151)||(11131263-11131340)
chr2 (41-151)||(37131461-37131570)
chr2 (83-151)||(627560-627628)
chr2 (74-146)||(44543721-44543793)
chr2 (21-60)||(3249469-3249508)
chr2 (17-64)||(3249680-3249727)
chr2 (74-151)||(15256568-15256645)
chr2 (86-151)||(28612039-28612104)
chr2 (74-151)||(29550156-29550237)
[»] chr5 (32 HSPs)
chr5 (41-151)||(31486808-31486918)
chr5 (41-151)||(31487057-31487166)
chr5 (41-151)||(26523132-26523242)
chr5 (41-151)||(43394926-43395036)
chr5 (41-146)||(16528628-16528733)
chr5 (41-151)||(7127582-7127692)
chr5 (41-151)||(12442125-12442235)
chr5 (41-151)||(16528804-16528914)
chr5 (41-151)||(11314002-11314113)
chr5 (42-151)||(35159727-35159835)
chr5 (74-151)||(11313825-11313902)
chr5 (74-151)||(16529158-16529235)
chr5 (41-151)||(24350891-24351001)
chr5 (41-151)||(24351444-24351554)
chr5 (74-146)||(11313668-11313740)
chr5 (74-132)||(16305388-16305446)
chr5 (91-151)||(24326548-24326608)
chr5 (91-151)||(24350733-24350793)
chr5 (91-151)||(24351287-24351347)
chr5 (76-151)||(16526221-16526296)
chr5 (74-151)||(7673224-7673302)
chr5 (41-151)||(16528982-16529090)
chr5 (81-151)||(26523268-26523338)
chr5 (95-148)||(3432939-3432992)
chr5 (41-151)||(19121930-19122040)
chr5 (74-151)||(19122266-19122343)
chr5 (74-142)||(7779476-7779544)
chr5 (79-151)||(41093080-41093152)
chr5 (41-145)||(43395101-43395207)
chr5 (74-151)||(9488075-9488152)
chr5 (74-151)||(23138055-23138131)
chr5 (79-151)||(41092901-41092972)
[»] chr8 (41 HSPs)
chr8 (41-151)||(33198856-33198965)
chr8 (41-151)||(2084899-2085010)
chr8 (41-148)||(27853643-27853750)
chr8 (41-151)||(3459108-3459218)
chr8 (74-151)||(23828133-23828210)
chr8 (41-151)||(44433652-44433762)
chr8 (41-146)||(38111372-38111477)
chr8 (40-153)||(40399466-40399579)
chr8 (74-142)||(44429082-44429150)
chr8 (74-148)||(604508-604583)
chr8 (41-151)||(23085883-23085994)
chr8 (74-151)||(1197901-1197978)
chr8 (74-151)||(23830951-23831028)
chr8 (74-151)||(32062840-32062917)
chr8 (74-151)||(39922094-39922171)
chr8 (41-151)||(44429917-44430027)
chr8 (41-153)||(29580012-29580123)
chr8 (85-151)||(44434176-44434242)
chr8 (41-138)||(604820-604918)
chr8 (74-151)||(37410078-37410155)
chr8 (42-151)||(23960774-23960882)
chr8 (85-152)||(44429419-44429485)
chr8 (74-151)||(23838348-23838426)
chr8 (74-148)||(35617708-35617782)
chr8 (41-151)||(44430441-44430552)
chr8 (74-123)||(33198652-33198701)
chr8 (41-151)||(37198271-37198381)
chr8 (82-151)||(44429247-44429316)
chr8 (85-148)||(604344-604408)
chr8 (74-146)||(34947504-34947576)
chr8 (39-151)||(44433825-44433938)
chr8 (105-151)||(23838173-23838219)
chr8 (74-151)||(37198119-37198197)
chr8 (85-151)||(44430613-44430678)
chr8 (41-151)||(44433999-44434110)
chr8 (43-151)||(44430090-44430199)
chr8 (74-120)||(604682-604728)
chr8 (41-151)||(44430264-44430375)
chr8 (78-151)||(13461837-13461910)
chr8 (35-64)||(44014831-44014860)
chr8 (79-151)||(13797465-13797537)
[»] chr4 (43 HSPs)
chr4 (74-153)||(47428421-47428500)
chr4 (41-151)||(54653622-54653732)
chr4 (46-151)||(48076213-48076318)
chr4 (41-148)||(36639198-36639305)
chr4 (74-151)||(44500695-44500772)
chr4 (41-151)||(48076391-48076501)
chr4 (41-151)||(2481624-2481731)
chr4 (41-145)||(4941707-4941811)
chr4 (74-148)||(8079044-8079119)
chr4 (74-153)||(12796126-12796205)
chr4 (41-151)||(23952478-23952587)
chr4 (74-151)||(28389777-28389854)
chr4 (74-151)||(53144851-53144928)
chr4 (79-151)||(22292921-22292993)
chr4 (41-153)||(7821324-7821436)
chr4 (47-151)||(43161719-43161823)
chr4 (41-145)||(52689591-52689695)
chr4 (41-151)||(2177287-2177397)
chr4 (74-151)||(7526450-7526527)
chr4 (41-151)||(8118620-8118730)
chr4 (74-151)||(23952786-23952863)
chr4 (74-151)||(24049588-24049665)
chr4 (74-151)||(47768975-47769052)
chr4 (74-151)||(48076568-48076645)
chr4 (74-145)||(22292720-22292791)
chr4 (74-143)||(21581282-21581351)
chr4 (74-151)||(28379768-28379844)
chr4 (74-151)||(29967202-29967279)
chr4 (74-151)||(36639368-36639445)
chr4 (74-148)||(8078918-8078994)
chr4 (80-151)||(7796808-7796879)
chr4 (74-117)||(9711315-9711358)
chr4 (41-148)||(7821545-7821652)
chr4 (76-149)||(43161933-43162006)
chr4 (104-151)||(15456315-15456362)
chr4 (104-151)||(15463699-15463746)
chr4 (116-151)||(24046088-24046123)
chr4 (77-151)||(28379981-28380054)
chr4 (35-64)||(8079232-8079261)
chr4 (74-151)||(8118405-8118481)
chr4 (74-151)||(8397748-8397825)
chr4 (74-142)||(8079327-8079395)
chr4 (82-114)||(10466612-10466644)
[»] chr1 (30 HSPs)
chr1 (42-146)||(43761975-43762079)
chr1 (41-151)||(1156038-1156148)
chr1 (41-151)||(44263112-44263222)
chr1 (41-151)||(318578-318688)
chr1 (41-151)||(42492137-42492248)
chr1 (74-148)||(51114116-51114190)
chr1 (41-151)||(38684038-38684148)
chr1 (41-151)||(51113929-51114039)
chr1 (74-151)||(5428551-5428628)
chr1 (45-151)||(27296360-27296466)
chr1 (74-151)||(42496939-42497016)
chr1 (74-151)||(42497297-42497374)
chr1 (41-148)||(16165658-16165766)
chr1 (74-145)||(21617785-21617856)
chr1 (41-151)||(51113746-51113857)
chr1 (74-151)||(5428956-5429033)
chr1 (74-151)||(44262687-44262764)
chr1 (74-146)||(6537661-6537733)
chr1 (41-148)||(52740726-52740834)
chr1 (42-151)||(5429071-5429184)
chr1 (74-151)||(3227229-3227305)
chr1 (74-151)||(27296185-27296262)
chr1 (86-149)||(28950277-28950340)
chr1 (75-146)||(51272499-51272570)
chr1 (75-151)||(44263333-44263409)
chr1 (39-151)||(1647566-1647678)
chr1 (104-151)||(18912350-18912397)
chr1 (104-151)||(28950023-28950070)
chr1 (74-145)||(44099676-44099747)
chr1 (83-148)||(33375656-33375721)
[»] chr7 (47 HSPs)
chr7 (41-151)||(16671628-16671738)
chr7 (41-151)||(17645996-17646106)
chr7 (41-151)||(23591386-23591496)
chr7 (43-151)||(4454947-4455055)
chr7 (74-151)||(4680901-4680978)
chr7 (74-151)||(11650013-11650090)
chr7 (41-151)||(12140833-12140943)
chr7 (74-151)||(18486657-18486734)
chr7 (39-151)||(4681114-4681227)
chr7 (41-145)||(18487180-18487284)
chr7 (41-149)||(27716503-27716611)
chr7 (74-148)||(27716314-27716388)
chr7 (41-151)||(48640772-48640883)
chr7 (74-151)||(2354670-2354747)
chr7 (74-151)||(9141966-9142043)
chr7 (74-142)||(43059223-43059291)
chr7 (41-151)||(2526925-2527036)
chr7 (74-151)||(4455390-4455467)
chr7 (41-151)||(11646369-11646479)
chr7 (41-151)||(21224161-21224271)
chr7 (39-151)||(45419606-45419718)
chr7 (32-151)||(23591594-23591713)
chr7 (41-151)||(22324307-22324417)
chr7 (74-151)||(22773916-22773992)
chr7 (90-151)||(32278157-32278218)
chr7 (41-151)||(35124748-35124858)
chr7 (80-151)||(11645942-11646013)
chr7 (104-151)||(11646650-11646697)
chr7 (75-153)||(16362696-16362774)
chr7 (74-151)||(16671269-16671346)
chr7 (74-151)||(17645637-17645714)
chr7 (74-151)||(19222128-19222206)
chr7 (74-151)||(34837210-34837288)
chr7 (84-145)||(9142148-9142209)
chr7 (78-151)||(11646218-11646291)
chr7 (74-151)||(16377432-16377509)
chr7 (41-131)||(45419814-45419904)
chr7 (46-148)||(48640993-48641095)
chr7 (74-117)||(16376489-16376532)
chr7 (80-151)||(38694821-38694892)
chr7 (80-151)||(40450112-40450183)
chr7 (108-146)||(23591238-23591276)
chr7 (74-151)||(30991482-30991560)
chr7 (74-151)||(16492550-16492626)
chr7 (78-151)||(21128063-21128136)
chr7 (74-131)||(46264288-46264345)
chr7 (74-151)||(48641447-48641523)
[»] chr6 (29 HSPs)
chr6 (41-151)||(9828942-9829052)
chr6 (74-151)||(23902530-23902607)
chr6 (74-148)||(17200012-17200086)
chr6 (41-151)||(25068211-25068322)
chr6 (74-151)||(4811068-4811145)
chr6 (74-151)||(17202873-17202950)
chr6 (74-151)||(17906806-17906883)
chr6 (41-151)||(25067985-25068095)
chr6 (100-151)||(17011132-17011183)
chr6 (74-151)||(17080058-17080135)
chr6 (74-151)||(27579621-27579698)
chr6 (86-136)||(8685186-8685236)
chr6 (74-143)||(17202661-17202731)
chr6 (41-151)||(23610455-23610565)
chr6 (41-151)||(17201620-17201730)
chr6 (44-151)||(808495-808601)
chr6 (74-151)||(808852-808930)
chr6 (86-136)||(8674507-8674557)
chr6 (74-151)||(17200347-17200424)
chr6 (80-145)||(23622247-23622312)
chr6 (74-151)||(24223530-24223607)
chr6 (74-117)||(17200468-17200511)
chr6 (108-151)||(29201581-29201624)
chr6 (47-151)||(4100293-4100401)
chr6 (77-151)||(24223166-24223240)
chr6 (74-151)||(32208413-32208490)
chr6 (35-64)||(17080361-17080390)
chr6 (82-151)||(17203678-17203747)
chr6 (74-151)||(27315310-27315386)
[»] chr3 (34 HSPs)
chr3 (74-151)||(11454586-11454663)
chr3 (41-151)||(40050873-40050982)
chr3 (41-151)||(46451493-46451603)
chr3 (41-151)||(47503026-47503136)
chr3 (74-153)||(36643133-36643212)
chr3 (76-138)||(52300747-52300809)
chr3 (41-151)||(837176-837286)
chr3 (74-151)||(11220800-11220876)
chr3 (74-151)||(18094979-18095056)
chr3 (86-151)||(43819351-43819416)
chr3 (80-151)||(38887377-38887448)
chr3 (74-151)||(43017294-43017371)
chr3 (74-145)||(16015256-16015327)
chr3 (74-120)||(21969013-21969059)
chr3 (74-120)||(21991449-21991495)
chr3 (41-151)||(20877189-20877299)
chr3 (41-131)||(47503199-47503289)
chr3 (75-151)||(37760520-37760596)
chr3 (41-151)||(38887551-38887663)
chr3 (76-151)||(18094764-18094839)
chr3 (80-151)||(53047599-53047670)
chr3 (41-151)||(35560124-35560235)
chr3 (41-151)||(11454228-11454338)
chr3 (111-151)||(3847848-3847888)
chr3 (74-150)||(17755760-17755836)
chr3 (74-150)||(19057080-19057156)
chr3 (79-151)||(38887806-38887878)
chr3 (74-145)||(24365763-24365834)
chr3 (108-151)||(47519894-47519937)
chr3 (74-145)||(47519955-47520026)
chr3 (74-151)||(25917446-25917523)
chr3 (80-144)||(51654074-51654138)
chr3 (74-151)||(9240813-9240890)
chr3 (74-111)||(25937792-25937829)
[»] scaffold0001 (1 HSPs)
scaffold0001 (41-149)||(196672-196781)
[»] scaffold0018 (1 HSPs)
scaffold0018 (41-151)||(163775-163885)
[»] scaffold0013 (1 HSPs)
scaffold0013 (41-139)||(102738-102836)
[»] scaffold1155 (1 HSPs)
scaffold1155 (82-142)||(958-1018)
[»] scaffold0345 (1 HSPs)
scaffold0345 (82-142)||(9199-9259)
[»] scaffold0105 (1 HSPs)
scaffold0105 (82-142)||(29721-29781)
[»] scaffold0294 (1 HSPs)
scaffold0294 (82-151)||(12399-12468)
[»] scaffold0240 (1 HSPs)
scaffold0240 (74-151)||(13115-13192)
[»] scaffold0504 (1 HSPs)
scaffold0504 (74-151)||(1539-1617)


Alignment Details
Target: chr2 (Bit Score: 93; Significance: 5e-45; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 298 - 407
Target Start/End: Complemental strand, 9173243 - 9173130
Alignment:
Q  298 gagcatttgttaattcaatcatggtttgaatatagtgtggttgttgg----gagaggggatgaagaggttagatacgtggagagcacagccacctaccct 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9173243 gagcatttgttaattcaatcatggtttgaatatagtgtggttgttggttgggagagtggatgaagaggttagatacgtggagagcacagccacctaccct 9173144  T
Q  394 tctaagttataaat 407  Q
    ||||||||||||||    
T  9173143 tctaagttataaat 9173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 399 - 475
Target Start/End: Complemental strand, 9172979 - 9172903
Alignment:
Q  399 gttataaatagtgacacacttgtgtgtgctgccgtactgggtttttgcatctcacccgtgcactgtacagatacctt 475  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9172979 gttataaatagtgacacacttgtgtgtgctgccgtactgggtttttgcatctcacccgtgcactgtacagatacctt 9172903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 3249770 - 3249882
Alignment:
Q  39 atgataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattagg 138  Q
    |||||||||||||||||||||||||| |       ||||| |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  3249770 atgataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaattactgctaacctaatacagcaaataagcggaaaaatattagg 3249869  T
Q  139 ttaaattgctgca 151  Q
    |||||||| ||||    
T  3249870 ttaaattgttgca 3249882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 3249561 - 3249665
Alignment:
Q  47 aatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    ||||||||||||||||||||       ||||| || ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  3249561 aatgaaattggtgcgatgtatttttttagatgaaaattgttaggttaaattactgttaacctaatatagcaaatgagcgggaaaatattagcttaaattg 3249660  T
Q  147 ctgca 151  Q
    |||||    
T  3249661 ctgca 3249665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 28612206 - 28612316
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  28612206 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 28612305  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  28612306 aaattgatgca 28612316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 11736436 - 11736325
Alignment:
Q  39 atgataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattagg 138  Q
    ||||||| |||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||| ||  |||||||||||||||||||||||||    
T  11736436 atgatagaaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaaccttatgaagcaaatgagcgggaaaatattagg 11736337  T
Q  139 ttaaattgctgc 150  Q
    ||||||||||||    
T  11736336 ttaaattgctgc 11736325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 28611781 - 28611891
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||||| |||||||||||| |       |||||||| ||||||| |||||| | ||| ||||||||  |||||||||||||||||| ||||||||    
T  28611781 gataggaatgatattggtgcgatgcatttttttagatggaacttgttaggttaaataattgcaaacctaatcaagcaaatgagcgggaaaaaattaggtt 28611880  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  28611881 aaattgctgca 28611891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 5001676 - 5001777
Alignment:
Q  45 ggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaat 144  Q
    |||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||||||    
T  5001676 ggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaat 5001775  T
Q  145 tg 146  Q
    ||    
T  5001776 tg 5001777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 10129470 - 10129580
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||| |||||| |||| |||||| | ||| ||||||||| |||||||||||| ||| | ||||||||    
T  10129470 gataggaatgaaattggtgcgatgaatttttttagatagaatttattaggttaaataattgcaaacctaataaagcaaatgagcgagaacaaattaggtt 10129569  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  10129570 aaattgctgca 10129580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 11736009 - 11735932
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  11736009 agatgaaatttgttaggttaaataattgcaaaccttatgaagcaaatgagcgggaaaatattaggttaaattgctgca 11735932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 12898123 - 12898046
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||||||||||||||| | ||| ||||||| | || |||||||||| ||||||| ||||||||||||||||    
T  12898123 agatggaatttgttagattaaataattgcaaacctaacaaagtaaatgagcggaaaaatatcaggttaaattgctgca 12898046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 41995726 - 41995831
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||||||||| |||||||| |       |||||||||||||||| |||||| | ||| ||||||||| ||||||||| | |||||| ||||||||    
T  41995726 gataggaatgaaattcgtgcgatgcatgtttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgaacaggaaaaaattaggtt 41995825  T
Q  141 aaattg 146  Q
    ||||||    
T  41995826 aaattg 41995831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 5001494 - 5001604
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||| |||||||||||||| |       ||||| ||||| |||| |||||| |||| |||||||||| ||||||||| || ||||| ||||| ||    
T  5001494 gataggaattaaattggtgcgatgcatttttttagatgaaattttttaggttaaataactgttaacctaataaagcaaatgaacgagaaaaaattagttt 5001593  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  5001594 aaattgctgca 5001604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 28612630 - 28612739
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| ||||| |||||||||||| ||||||||    
T  28612630 gatatgaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaa-tgagcgggaaaagattaggtt 28612728  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  28612729 aaattgttgca 28612739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 5013208 - 5013279
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||| ||||||| | ||  ||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  5013208 aatttgttaaattaaataattgtaaacctaataaagcaaatgagcgggaaaaatttaggttaaattgctgca 5013279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 6348199 - 6348095
Alignment:
Q  47 aatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    |||||||||||||||||| |       ||||| ||||||||| ||||||| | ||| ||||||||| ||||| |||||| ||||| |||| |||||||||    
T  6348199 aatgaaattggtgcgatgcatttttttagatgaaatttgttaaattaaataattgcaaacctaataaagcaattgagcgagaaaaaattatgttaaattg 6348100  T
Q  147 ctgca 151  Q
    |||||    
T  6348099 ctgca 6348095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 9173374 - 9173306
Alignment:
Q  167 agttagaagtttatttgagtnnnnnnntgtttaatttgtgagtttggtcgaataatttaaagaaagtag 235  Q
    |||| |||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||    
T  9173374 agtttgaagtttatttgagtaaaaaaatgtttaatttgtgagtttggtcgactaatttaaagaaagtag 9173306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 28612842 - 28612952
Alignment:
Q  42 ataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactg-ctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||||||||||||||||| |       ||||||||||||||||||||||| | ||   ||||||||| | ||||||| || ||||| ||||||||    
T  28612842 ataggaatgaaattggtgcgatgcattattttagatggaatttgttagattaaataattgaaaaacctaataaaacaaatgaacgagaaaaaattaggtt 28612941  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  28612942 aaattgttgca 28612952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 44256606 - 44256496
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||| |||||||||||||||||| |       ||||| ||||| |||| ||||||   ||  ||||||||| || ||||||||||||||| ||||||||    
T  44256606 gatagaaatgaaattggtgcgatgcatttttttagatgaaatttattaggttaaatacttgaaaacctaataaagaaaatgagcgggaaaaaattaggtt 44256507  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  44256506 aaattgctgca 44256496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 12896434 - 12896504
Alignment:
Q  76 atggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    ||||||||| ||||||||||| | ||| ||||||||| | ||||||||||| |||| |||| |||||||||    
T  12896434 atggaatttattagattaaataattgcaaacctaataaaacaaatgagcggaaaaagattaagttaaattg 12896504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 6348025 - 6347936
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaa 131  Q
    ||||||||||||||||||||||| ||       ||||| |||||||||| |||||| | || ||| |||||| ||||||||||||||||||    
T  6348025 gataggaatgaaattggtgcgatataattttttagatgaaatttgttaggttaaataattg-taaactaataaagcaaatgagcgggaaaa 6347936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 11131340 - 11131263
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| ||||||| ||||||||||||| |||||  | || |||||| ||||| ||||| ||||||||    
T  11131340 agatgaaatttgttaggttaaattgctgctaacctaatgcagcattttagagggaaattattaagttaagttgctgca 11131263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 37131461 - 37131570
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||||||||||||| |||| |       ||||| |||||||||  |||||| | ||| ||| ||||| |||||||||| || |||| ||||||||    
T  37131461 gataggaatgaaattggtgtgatgcatttttttagatgaaatttgttaagttaaataattgcaaac-taataaagcaaatgagtggaaaaaaattaggtt 37131559  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  37131560 aaattgctgca 37131570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 627628 - 627560
Alignment:
Q  83 ttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||| |||||| | ||| ||  ||||| || ||||||||||||||| |||||||||||||||||||    
T  627628 ttgttaggttaaataattgcaaatgtaataaagtaaatgagcgggaaaaaattaggttaaattgctgca 627560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 44543721 - 44543793
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    |||| |||||| |||| |||||| | ||| |||| |||| |||||||||||||| ||| ||||||||||||||    
T  44543721 agatagaattttttaggttaaataattgcaaaccaaataaagcaaatgagcggggaaaaattaggttaaattg 44543793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 3249469 - 3249508
Alignment:
Q  21 aataaggatatagccaacatgataggaatgaaattggtgc 60  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  3249469 aataaagatatagccaacatgatagaaatgaaattggtgc 3249508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 3249680 - 3249727
Alignment:
Q  17 aataaataaggatatagccaacatgataggaatgaaattggtgcgatg 64  Q
    ||||||||||||||||||||||| |||| |||| |||||||| |||||    
T  3249680 aataaataaggatatagccaacaagatatgaattaaattggtacgatg 3249727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 15256568 - 15256645
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||||  |||||||||||| || ||  | || |||||| |||||| |||| ||||||||    
T  15256568 agatggaatttgttaggttaaattgttgctaacctaatgcaacattttagagggaaattattagattaagttgctgca 15256645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 28612039 - 28612104
Alignment:
Q  86 ttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| |||||| | ||| ||||||||| || |||||||| |||||| |||||||||||||| ||||    
T  28612039 ttaggttaaataattgcaaacctaataaagaaaatgagctggaaaaaattaggttaaattgttgca 28612104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 29550237 - 29550156
Alignment:
Q  74 agatggaatttgttagattaaattactgctaac----ctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| ||||||||||| |||||| | ||| |||    |||||| ||||||||||||| |||| |||||||||||||| ||||    
T  29550237 agattgaatttgttaggttaaataattgcaaacctagctaataaagcaaatgagcggaaaaaaattaggttaaattgttgca 29550156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 31486808 - 31486918
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  31486808 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaattactgttaacctaatacagcaaatgaacgggaaaatattaggtt 31486907  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  31486908 aaattgttgca 31486918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 31487057 - 31487166
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31487057 gataggaatgaaattggtgcgatgcatttttt-agatgaaatttgttaggttaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 31487155  T
Q  141 aaattgctgca 151  Q
    ||||| |||||    
T  31487156 aaattactgca 31487166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 26523132 - 26523242
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||||| |||| | ||| ||||||||| ||||||||||||| |||| ||||||||    
T  26523132 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttagatcaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggtt 26523231  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  26523232 aaattgatgca 26523242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 43394926 - 43395036
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||| |||||| ||||||||    
T  43394926 gataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcaggaaaaaattaggtt 43395025  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  43395026 aaattgctgca 43395036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 16528733 - 16528628
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||| ||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||| |||||||    
T  16528733 gataggaatgaaattggtgcgatgcatttttttagatagaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaatgttaggtt 16528634  T
Q  141 aaattg 146  Q
    ||||||    
T  16528633 aaattg 16528628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 7127692 - 7127582
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||  |       |||||||||||||||| |||||| | ||| ||||||||  ||||||||||| |||||| ||||||||    
T  7127692 gataggaatgaaattggtgcgatacatttttttagatggaatttgttagtttaaataattgcaaacctaatcaagcaaatgagcaggaaaaaattaggtt 7127593  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  7127592 aaattgctgca 7127582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 12442125 - 12442235
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| |||||||||  ||||||||||||||||| ||||||||    
T  12442125 gatatgaatgaaattggtgcgatgcatttttgtagatgtaatttgttaggttaaataattgcaaacctaataaggcaaatgagcgggaaaaaattaggtt 12442224  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  12442225 aaattgctgca 12442235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 16528914 - 16528804
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||| ||||||| ||||||   ||| |||||||||  ||||||||||||||||| ||||||||    
T  16528914 gataggaatgaaattggtgcgatgaatttttttagatggaagttgttaggttaaatatttgcaaacctaataaggcaaatgagcgggaaaaaattaggtt 16528815  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  16528814 aaattgctgca 16528804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 11314113 - 11314002
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgg-gaaaatattaggt 139  Q
    |||||||||||||||||||||||| |       ||||||||||| |||| |||||| | ||| ||||||||| |||||||||||||  |||| |||||||    
T  11314113 gataggaatgaaattggtgcgatgcatttttttagatggaattttttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaaattaggt 11314014  T
Q  140 taaattgctgca 151  Q
    ||||||||||||    
T  11314013 taaattgctgca 11314002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 35159835 - 35159727
Alignment:
Q  42 ataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtta 141  Q
    ||||||||||||||||||||||| |       ||||  |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| | |||||||    
T  35159835 ataggaatgaaattggtgcgatgcatttttttagataaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaa-aataggtta 35159737  T
Q  142 aattgctgca 151  Q
    ||||||||||    
T  35159736 aattgctgca 35159727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 11313902 - 11313825
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| || ||||| ||||||||| |||||||||||||| ||||    
T  11313902 agatggaatttgttaggttaaataattgcaaacctaataaagaaaatgtgcgggaaaaaattaggttaaattgttgca 11313825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 16529235 - 16529158
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||  |||||| | ||| || |||||| |||||||||||| ||||| |||||||||||||||||||    
T  16529235 agatggaatttgttacgttaaataattgcaaatctaataaagcaaatgagcgcgaaaaaattaggttaaattgctgca 16529158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 24350891 - 24351001
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||| |||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| | |||||||||||||||  ||||||||    
T  24350891 gatagtaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgggaaataattaggtt 24350990  T
Q  141 aaattgctgca 151  Q
    ||||| |||||    
T  24350991 aaattactgca 24351001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 24351444 - 24351554
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||| |||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| | |||||||||||||||  ||||||||    
T  24351444 gatagtaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgggaaataattaggtt 24351543  T
Q  141 aaattgctgca 151  Q
    ||||| |||||    
T  24351544 aaattactgca 24351554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 11313740 - 11313668
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    |||| ||||||||||| |||||| | ||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  11313740 agatagaatttgttaggttaaataattgcaaacctaataaagaaaatgagcgggaaaaaattaggttaaattg 11313668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 16305446 - 16305388
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaat 132  Q
    ||||||||||| ||||||||||| | ||| ||||||||| |||||||||||||||||||    
T  16305446 agatggaatttattagattaaataattgcaaacctaataaagcaaatgagcgggaaaat 16305388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 24326608 - 24326548
Alignment:
Q  91 ttaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  24326608 ttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgttgca 24326548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 24350733 - 24350793
Alignment:
Q  91 ttaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  24350733 ttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgttgca 24350793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 24351287 - 24351347
Alignment:
Q  91 ttaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  24351287 ttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgttgca 24351347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 16526296 - 16526221
Alignment:
Q  76 atggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||| |||||| | ||| ||||||||| |||||||||| |  |||| |||||||||||||| ||||    
T  16526296 atggaatttgttaggttaaataattgcaaacctaataaagcaaatgagtgaaaaaaaattaggttaaattgatgca 16526221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 7673224 - 7673302
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaata-ttaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| | ||||||| |||||||| | ||||||||||||||||||    
T  7673224 agatgaaatttgttaggttaaataattgcaaacctaataaaacaaatgaacgggaaaaaaattaggttaaattgctgca 7673302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 16529090 - 16528982
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||  |||||||||| |||||| | ||| |||||||||  |||||||||| |||||||  ||||||    
T  16529090 gatatgaatgaaattggtgcgatgaatttttttagattaaatttgttaggttaaataattgcaaacctaataaggcaaatgagcaggaaaat--taggtt 16528993  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  16528992 aaattgctgca 16528982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 26523268 - 26523338
Alignment:
Q  81 atttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||| | |||| | ||| ||||||||| ||||||| |||||||||| |||||||||||||| ||||    
T  26523268 atttgttaggtcaaataattgcaaacctaataaagcaaataagcgggaaaaaattaggttaaattgatgca 26523338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 3432992 - 3432939
Alignment:
Q  95 attactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgct 148  Q
    ||||||||||||||||||||  |||| || ||||||||||||| ||||||||||    
T  3432992 attactgctaacctaatacaaaaaattagagggaaaatattagattaaattgct 3432939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 19122040 - 19121930
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       |||| ||||||||||| |||||  | ||| ||||||||| ||||||||||  | |||| ||||||||    
T  19122040 gatatgaatgaaattggtgcgatgcatttttttagatagaatttgttaggttaaacaattgcaaacctaataaagcaaatgagttgaaaaaaattaggtt 19121941  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  19121940 aaattgatgca 19121930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 19122343 - 19122266
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| ||||||||||| |||||  | ||| ||||||||| |||||||||| || |||| |||||||||||||| ||||    
T  19122343 agatagaatttgttaggttaaacaattgcaaacctaataaagcaaatgagtggaaaaaaattaggttaaattgatgca 19122266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 7779544 - 7779476
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    ||||||||||||| || ||||||| ||||||||||||| |||||  | || |||||| |||||||||||    
T  7779544 agatggaatttgtcaggttaaattgctgctaacctaatgcagcattttagagggaaattattaggttaa 7779476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 41093080 - 41093152
Alignment:
Q  79 gaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||| |||||| | ||| ||||||||| ||||||| ||| |||| | |||||||||||||| ||||    
T  41093080 gaatttgttaggttaaataattgcaaacctaataaagcaaatcagcaggaataaattaggttaaattgatgca 41093152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 43395101 - 43395207
Alignment:
Q  41 gataggaatgaaattggtgcgatg--tannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattagg 138  Q
    ||||||||||||||||||||||||  ||       | ||| |||||||||| |||||| | ||  ||||||||| |||||||||||||||||| || | |    
T  43395101 gataggaatgaaattggtgcgatgcatatttttttacatgtaatttgttaggttaaataattggaaacctaataaagcaaatgagcgggaaaaaatcaag 43395200  T
Q  139 ttaaatt 145  Q
    |||||||    
T  43395201 ttaaatt 43395207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 9488075 - 9488152
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| || |||||| ||||||| | ||| |||| |||||||||||||| ||||    
T  9488075 agatgaaatttgttaggttaaataattgcaaatctaataaagcaaataaacggaaaaaaattaggttaaattgttgca 9488152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 23138131 - 23138055
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||| ||||||  ||| || | ||| ||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  23138131 agatggaacttgttacgttatataattgcaaacctaataaagcaaatgagc-ggaaaaaattaggttaaaatgctgca 23138055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 41092901 - 41092972
Alignment:
Q  79 gaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||| |||||| | ||| ||||||||| |||||| |||| |||| | |||||||||||||| ||||    
T  41092901 gaatttgttaggttaaataattgcaaacctaataaagcaaaagagc-ggaataaattaggttaaattgatgca 41092972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 33198965 - 33198856
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  33198965 gataggaatgaaattggtgcgatgcatttttt-agatggaatttgttaggttaaatcactgttaacctaatacagcaaatgagcggaaaaatattaggtt 33198867  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  33198866 aaattgctgca 33198856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 2085010 - 2084899
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||||| |        |||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| |    
T  2085010 gataggaatgaaattggtgcgatgcatttttcttagatggaatttgttaggttaaattactactaacctaatacagcaaatgagagggaaaatattagat 2084911  T
Q  140 taaattgctgca 151  Q
    ||| ||||||||    
T  2084910 taagttgctgca 2084899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 27853643 - 27853750
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| || ||||||||||||||| ||||||||    
T  27853643 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagtaaatgagcgggaaaaaattaggtt 27853742  T
Q  141 aaattgct 148  Q
    ||||||||    
T  27853743 aaattgct 27853750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 3459108 - 3459218
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||| ||||||| |       ||||| ||||||||||||||||| | ||| ||||||||| |||||||||||||||||| |||| |||    
T  3459108 gataggaatgaaattgatgcgatgcatttttttagatgaaatttgttagattaaataattgcaaacctaataaagcaaatgagcgggaaaaaattatgtt 3459207  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  3459208 aaattgctgca 3459218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 23828133 - 23828210
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  23828133 agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 23828210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 44433762 - 44433652
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| |||||||||||||||| |||||||||||||| | |||||||||||| ||     
T  44433762 gataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaattactgctaacataatacagcaaatgggagggaaaatattaagtg 44433663  T
Q  141 aaattgctgca 151  Q
    || ||||||||    
T  44433662 aagttgctgca 44433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 38111477 - 38111372
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||| | |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  38111477 gataggaatgaaattggtgcgatgcattttttcagatggaatttgttgggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 38111378  T
Q  141 aaattg 146  Q
    ||||||    
T  38111377 aaattg 38111372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 40399466 - 40399579
Alignment:
Q  40 tgataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    ||||||||||||||||||||||||| |       |||||||||||||||| |||||| | | | ||||||||| | |||||||||||||||| |||||||    
T  40399466 tgataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattacaaacctaataaaacaaatgagcgggaaaaaattaggt 40399565  T
Q  140 taaattgctgcata 153  Q
    ||||||||| ||||    
T  40399566 taaattgctacata 40399579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 44429150 - 44429082
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    |||||||||||||||| |||||||| |||| |||||||| |||||||||| ||||||||||||||||||    
T  44429150 agatggaatttgttaggttaaattattgcttacctaataaagcaaatgagagggaaaatattaggttaa 44429082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 604508 - 604583
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaat-gagcgggaaaatattaggttaaattgct 148  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  604508 agatgaaatttgttatgttaaattactgctaacctaatacagcaaatagagagggaaaatattaggttaagttgct 604583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 23085994 - 23085883
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    ||||||||||||||||||||||||||        ||||||||||| |||| |||||| | ||| ||||||||| |||||||||| ||||||| |||||||    
T  23085994 gataggaatgaaattggtgcgatgtattttttttagatggaatttattaggttaaataattgcaaacctaataaagcaaatgagtgggaaaaaattaggt 23085895  T
Q  140 taaattgctgca 151  Q
    ||||||| ||||    
T  23085894 taaattgttgca 23085883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 1197978 - 1197901
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  1197978 agatgaaatttgttaggttaaataattgcaaccctaataaagcaaatgagcgggaaaagattaggttaaattgctgca 1197901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 23830951 - 23831028
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  23830951 agatgcaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaatttctgca 23831028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 32062917 - 32062840
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  32062917 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattagtttaaattgctgca 32062840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 39922094 - 39922171
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  39922094 agatggaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgggaaaaaattaagttaaattgctgca 39922171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 44430027 - 44429917
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||| |||||||||| |||||||||||||||| ||||||| |||||| | |||||||||||| ||     
T  44430027 gatatgaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaattactgctaacataatacaacaaatgggagggaaaatattaagtg 44429928  T
Q  141 aaattgctgca 151  Q
    || ||||||||    
T  44429927 aagttgctgca 44429917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 29580012 - 29580123
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| ||| |||||| |||||| | ||| ||||||||| | |||||||||||||||| ||||||||    
T  29580012 gataggaatgaaattggtgcgatgcaattttt-agatgaaatgtgttagtttaaataattgcaaacctaataaaacaaatgagcgggaaaaaattaggtt 29580110  T
Q  141 aaattgctgcata 153  Q
    |||||| ||||||    
T  29580111 aaattgatgcata 29580123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 44434242 - 44434176
Alignment:
Q  85 gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||  ||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  44434242 gttaggttaaattaccactaacctaatacaacaaatgagagggaaaatattaggttaagttgctgca 44434176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 604820 - 604918
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaat-gagcgggaaaatattagg 138  Q
    ||||||||||||||| |||||||| |       ||||| |||||||||| ||||||||||| |||||||||||||||||| | | ||||||||||||||    
T  604820 gataggaatgaaatttgtgcgatgcatttttttagatgaaatttgttaggttaaattactggtaacctaatacagcaaatagggagggaaaatattagg 604918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 37410078 - 37410155
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||| ||||||||||||||    
T  37410078 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaagttaaattgctgca 37410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 23960774 - 23960882
Alignment:
Q  42 ataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtta 141  Q
    ||||||||||||||| ||||||||        |||||||||||||||| |||||| | | | ||||||||| ||||||||||  |||||| |||||||||    
T  23960774 ataggaatgaaattgatgcgatgtctttttttagatggaatttgttaggttaaataattacaaacctaataaagcaaatgag-tggaaaaaattaggtta 23960872  T
Q  142 aattgctgca 151  Q
    ||||||||||    
T  23960873 aattgctgca 23960882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 152
Target Start/End: Complemental strand, 44429485 - 44429419
Alignment:
Q  85 gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgcat 152  Q
    ||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||| |||||||||    
T  44429485 gttaggttaaatta-tgctaacctaatacaacaaacgagagggaaaatattaggttaagttgctgcat 44429419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 23838348 - 23838426
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatatt-aggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| || |||||| |||||||||||||||||| ||| ||||||||||||||||    
T  23838348 agatgcaatttgttaggttaaataattgcaaaactaataaagcaaatgagcgggaaaaaattaaggttaaattgctgca 23838426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 35617782 - 35617708
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgct 148  Q
    |||| ||||||||||| |||||| | ||| ||||||||| | |||||||||||||||| |||| |||||||||||    
T  35617782 agatagaatttgttaggttaaataattgcaaacctaataaaacaaatgagcgggaaaaaattaagttaaattgct 35617708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 44430552 - 44430441
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaattt-gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||| | |       ||||| ||||| ||| | ||||||||||||| |||| ||| |||||||||| ||||||||| |||||    
T  44430552 gataggaatgaaattggtgcgaagcatttttcaagatgaaattttgttgggttaaattactgcttacctgataaagcaaatgagagggaaaatagtaggt 44430453  T
Q  140 taaattgctgca 151  Q
    ||| ||||||||    
T  44430452 taagttgctgca 44430441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 33198701 - 33198652
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgag 123  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  33198701 agatgaaatttgttaggttaaattagtgctaacctaatacagcaaatgag 33198652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 37198271 - 37198381
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||| ||| |       |||||||||||||||| |||||  | ||  |||| |||| ||||||||||||| |||| ||||||||    
T  37198271 gataggaatgaaattggtgcaatgcatttttttagatggaatttgttaggttaaacaattgaaaaccgaataaagcaaatgagcggaaaaaaattaggtt 37198370  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  37198371 aaattgttgca 37198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 44429316 - 44429247
Alignment:
Q  82 tttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||| | ||||||||||||| |||||||| |||||||||| || ||||||||||||||| ||| ||||    
T  44429316 tttgttgggttaaattactgcttacctaataaagcaaatgagaggaaaaatattaggttaagttgttgca 44429247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 604344 - 604408
Alignment:
Q  85 gttagattaaattactgctaacctaatacagcaaat-gagcgggaaaatattaggttaaattgct 148  Q
    ||||| ||||||||||| |||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  604344 gttaggttaaattactgttaacctaatacaacaaatagagagggaaaatattaggttaagttgct 604408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 34947576 - 34947504
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    ||||| |||||||||| |||||| | | | ||||||||| ||||||||||||| |||| ||||||||||||||    
T  34947576 agatgaaatttgttaggttaaataatttcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattg 34947504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 44433938 - 44433825
Alignment:
Q  39 atgataggaatgaaattggtgcgatgtannnnnnnagatggaattt-gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattag 137  Q
    |||||||||||||||||||||||| | |       ||||||||||| ||| | |||||||| |||| |||||||| |||||||| | ||||||||||||     
T  44433938 atgataggaatgaaattggtgcgaagcatttttaaagatggaattttgttgggttaaattaatgcttacctaataaagcaaatgggagggaaaatattac 44433839  T
Q  138 gttaaattgctgca 151  Q
    ||||| ||| ||||    
T  44433838 gttaagttgttgca 44433825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 23838173 - 23838219
Alignment:
Q  105 acctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||    
T  23838173 acctaataaagcaaatgagcgggaaaaaattaggttaaattgttgca 23838219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 37198119 - 37198197
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgg-gaaaatattaggttaaattgctgca 151  Q
    |||| |||||| |||| |||||| | ||| ||||||||| |||||||||||||  |||| |||||||||||||||||||    
T  37198119 agatagaatttattaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaaattaggttaaattgctgca 37198197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 44430678 - 44430613
Alignment:
Q  85 gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||| ||||||||||||||| || ||||  |||||||||||||||||| ||||||||    
T  44430678 gttaggttaaatta-tgctaacctaatacaacagatgaaagggaaaatattaggttaagttgctgca 44430613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 44434110 - 44433999
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaattt-gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||| | |       ||||| ||||| ||| | ||||||||||||| |||||||| |||||||| | |||||| ||||||||    
T  44434110 gataggaatgaaattggtgcgaagcatttttcaagatgaaattttgttgggttaaattactgcttacctaataaagcaaatgggagggaaagtattaggt 44434011  T
Q  140 taaattgctgca 151  Q
    ||| ||| ||||    
T  44434010 taagttgttgca 44433999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 44430199 - 44430090
Alignment:
Q  43 taggaatgaaattggtgcgatgtannnnnnnagatggaattt-gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtta 141  Q
    |||||||||||||||||||| | |       ||||||||||| ||| | |||||||| |||| |||||||| |||||||| | |||||||||||| ||||    
T  44430199 taggaatgaaattggtgcgaagcatttttaaagatggaattttgttgggttaaattaatgcttacctaataaagcaaatgggagggaaaatattacgtta 44430100  T
Q  142 aattgctgca 151  Q
    | ||| ||||    
T  44430099 agttgttgca 44430090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 604682 - 604728
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaat 120  Q
    ||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  604682 agatgaaatttgttaggttaaattactgcttacctaataaagcaaat 604728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 44430375 - 44430264
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaattt-gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||| | |       ||||| ||||| ||| | ||||||||||||| |||||||| || ||||| | || ||||||||||||    
T  44430375 gataggaatgaaattggtgcgaagcatttttcaagatgaaattttgttgggttaaattactgcttacctaataaagtaaatgggaggaaaaatattaggt 44430276  T
Q  140 taaattgctgca 151  Q
    ||| ||| ||||    
T  44430275 taagttgttgca 44430264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 13461837 - 13461910
Alignment:
Q  78 ggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||| ||||||| ||||||||||||| |||||  | || |||||| || |||||||| ||| ||||    
T  13461837 ggaatttgttaggttaaattgctgctaacctaatgcagcattttagagggaaattagtaggttaacttgttgca 13461910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 44014860 - 44014831
Alignment:
Q  35 caacatgataggaatgaaattggtgcgatg 64  Q
    ||||||||||||||||||||||||||||||    
T  44014860 caacatgataggaatgaaattggtgcgatg 44014831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 13797537 - 13797465
Alignment:
Q  79 gaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||  |||||| | ||| ||||||||| ||||||||||| |||||| | |||||||| ||| ||||    
T  13797537 gaatttgttaagttaaataattgcaaacctaataaagcaaatgagcaggaaaaaactaggttaagttgatgca 13797465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 47428421 - 47428500
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgcata 153  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||    
T  47428421 agatggaatttgttaggttaaattactgctaacctaatacaacaaatgggagggaaaatattaggttaagttgctgcata 47428500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 54653622 - 54653732
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||||||||||||| |||| |       |||| ||||||||||| |||||| ||||| ||||||||| |||||||||||||||||| ||||||||    
T  54653622 gataggaatgaaattggtgtgatgcatttttttagattgaatttgttaggttaaataactgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 54653721  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  54653722 aaattgatgca 54653732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 48076318 - 48076213
Alignment:
Q  46 gaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    ||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||| |||||||    
T  48076318 gaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattagattaaatt 48076219  T
Q  146 gctgca 151  Q
    ||||||    
T  48076218 gctgca 48076213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 36639305 - 36639198
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  36639305 gatatgaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 36639206  T
Q  141 aaattgct 148  Q
    ||||||||    
T  36639205 aaattgct 36639198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 44500772 - 44500695
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||  |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  44500772 agatggaatttgttacgttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 44500695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 48076501 - 48076391
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||| ||| ||||||||    
T  48076501 gataagaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggggaaaaattaggtt 48076402  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  48076401 aaattgctgca 48076391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 2481624 - 2481731
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||||   || ||||||||| |||||||||||||||||| ||||||||    
T  2481624 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaatt---gcaaacctaataaagcaaatgagcgggaaaaaattaggtt 2481720  T
Q  141 aaattgctgca 151  Q
    || ||| ||||    
T  2481721 aagttgttgca 2481731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 4941811 - 4941707
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||| |||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  4941811 gatagcaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 4941712  T
Q  141 aaatt 145  Q
    |||||    
T  4941711 aaatt 4941707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 8079119 - 8079044
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagc-gggaaaatattaggttaaattgct 148  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||    
T  8079119 agatggaatttgttaggttaaactactgctaacctaatacaacaaatgagcggggaaaaaattagcttaaattgct 8079044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 12796126 - 12796205
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgcata 153  Q
    ||||||||||||||||||||||| | ||| ||||||||| | ||||||||||| |||| |||||||||||||||| ||||    
T  12796126 agatggaatttgttagattaaataattgcaaacctaataaaacaaatgagcggaaaaaaattaggttaaattgctacata 12796205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 23952478 - 23952587
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       | ||||||||| |||| |||||| | ||| ||||||||| |||||||||||| ||||| ||||||||    
T  23952478 gataggaatgaaattggtgcgatgcattttttaa-atggaattttttaggttaaataattgcaaacctaataaagcaaatgagcgtgaaaaaattaggtt 23952576  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  23952577 aaattgctgca 23952587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 28389777 - 28389854
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||||||||| | |||| |||||    
T  28389777 agatggaatttgttaggttaaataaatgcaaacctaataaagcaaatgagcgggaaaatattaggatgaattactgca 28389854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 53144851 - 53144928
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | | | ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  53144851 agatgaaatttgttaggttaaataattacaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 53144928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 22292993 - 22292921
Alignment:
Q  79 gaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  22292993 gaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgca 22292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 7821436 - 7821324
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||||||||| |||| |||||| | ||| |   ||||| |||||||| ||||||||| ||||||||    
T  7821436 gataggaatgaaattggtgcgatgcatttttttagatggaatttattaggttaaataattgcaacattaataaagcaaatgggcgggaaaaaattaggtt 7821337  T
Q  141 aaattgctgcata 153  Q
    |||||||||||||    
T  7821336 aaattgctgcata 7821324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 43161719 - 43161823
Alignment:
Q  47 aatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    |||| |||||||||||||||       ||||| |||||||||| |||||| | ||| |||||||||  ||||||||||||||||| ||||||||||||||    
T  43161719 aatggaattggtgcgatgtatttttttagatgaaatttgttaggttaaataattgcaaacctaataatgcaaatgagcgggaaaaaattaggttaaattg 43161818  T
Q  147 ctgca 151  Q
     ||||    
T  43161819 ttgca 43161823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 52689591 - 52689695
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| |||||| | | | ||||||||| |||||||||||||||||| |||||| |    
T  52689591 gataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattacaaacctaataaagcaaatgagcgggaaaaaattaggat 52689690  T
Q  141 aaatt 145  Q
    |||||    
T  52689691 aaatt 52689695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 2177397 - 2177287
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||| |||||||||| |||| | | ||| ||||||||| |||||||||||||||||| ||||  ||    
T  2177397 gatatgaatgaaattggtgcgatgcatgtttttagatgaaatttgttaggttaagtaattgcaaacctaataaagcaaatgagcgggaaaaaattaaatt 2177298  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  2177297 aaattgctgca 2177287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 7526450 - 7526527
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| ||||||||||||||||||| | |||||  | || |||||| ||||||||||| ||||||||    
T  7526450 agatggaatttgttaggttaaattactgctaacctacttcagcattttagagggaaattattaggttaagttgctgca 7526527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 8118730 - 8118620
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||| | |       ||||| |||||||||| |||||| | ||| | ||||||| ||||||||||||| |||| ||||||||    
T  8118730 gataggaatgaaattggtgcgaagcatttttttagatgaaatttgttaggttaaataattgcaaccctaataaagcaaatgagcggaaaaaaattaggtt 8118631  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  8118630 aaattgttgca 8118620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 23952786 - 23952863
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||  |||||| | ||| ||||||||| | ||||||||||| |||| |||||||||||||||||||    
T  23952786 agatggaatttgttaagttaaataattgcaaacctaataaaacaaatgagcggaaaaaaattaggttaaattgctgca 23952863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 24049665 - 24049588
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||| ||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  24049665 agatgaaattcgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgatgca 24049588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 47769052 - 47768975
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||  ||||||||||||| |||| |||||||||||||||||||    
T  47769052 agatgaaatttgttaggttaaataattgcaaacctaatgaagcaaatgagcggaaaaaaattaggttaaattgctgca 47768975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 48076645 - 48076568
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||  ||||||||| ||||||| ||||| |||| |||||||||||||||||||    
T  48076645 agatggaatttgttaggttaaataattgtaaacctaataaagcaaattagcggaaaaaaattaggttaaattgctgca 48076568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 22292791 - 22292720
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    |||||| ||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||||||||||||    
T  22292791 agatggtatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaatt 22292720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 21581282 - 21581351
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaa 143  Q
    ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||| ||||| |||||||||||    
T  21581282 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgagaaaaaattaggttaaa 21581351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 28379768 - 28379844
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||| ||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||||||||||||| ||||    
T  28379768 agatggaatt-gttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgatgca 28379844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 29967279 - 29967202
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| ||| || | ||| || |||||| | |||||||||||||||| |||||||||| ||||||||    
T  29967279 agatggaatttgttaggttatataattgcaaatctaataaaacaaatgagcgggaaaaaattaggttaagttgctgca 29967202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 36639445 - 36639368
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| | ||||||| || |||||| |||||||| |||||||||||||||||||    
T  36639445 agatgaaatttgttaggttaaataattgcaatcctaataaagaaaatgaacgggaaaaaattaggttaaattgctgca 36639368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 8078994 - 8078918
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacag-caaatgagc-gggaaaatattaggttaaattgct 148  Q
    |||||||||||||||| ||||| |||||||||| ||||||||  |||||||| ||||||| ||||| ||||||||||    
T  8078994 agatggaatttgttaggttaaactactgctaacataatacagtaaaatgagcggggaaaaaattagcttaaattgct 8078918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 7796879 - 7796808
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||| |||||| | | | | ||||||| ||||||||||||| |||| |||||||||||||||||||    
T  7796879 aatttgttaggttaaataattacaatcctaataaagcaaatgagcggaaaaaaattaggttaaattgctgca 7796808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 9711358 - 9711315
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagca 117  Q
    ||||| |||||||||| |||||||||||||||||||||||||||    
T  9711358 agatgaaatttgttaggttaaattactgctaacctaatacagca 9711315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 7821652 - 7821545
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||  ||| |||||| | | | ||||||||| ||||||||||| | |||| ||||||||    
T  7821652 gataggaatgaaattggtgcgatgcatttttttagatgaaattttgtaggttaaataattacaaacctaataaagcaaatgagcagtaaaaaattaggtt 7821553  T
Q  141 aaattgct 148  Q
    ||||||||    
T  7821552 aaattgct 7821545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 43161933 - 43162006
Alignment:
Q  76 atggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctg 149  Q
    |||||||||||||  |||||| | ||| ||||||||| |||||||||||| |||||  ||| ||||||||||||    
T  43161933 atggaatttgttaagttaaataattgcaaacctaataaagcaaatgagcgtgaaaaagttaagttaaattgctg 43162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 15456362 - 15456315
Alignment:
Q  104 aacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||| |||||||||| |||| || |||||||||||||||||||    
T  15456362 aacctaataaagcaaatgagtgggataaaattaggttaaattgctgca 15456315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 15463746 - 15463699
Alignment:
Q  104 aacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||| |||||||||| |||| || |||||||||||||||||||    
T  15463746 aacctaataaagcaaatgagtgggataaaattaggttaaattgctgca 15463699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 151
Target Start/End: Complemental strand, 24046123 - 24046088
Alignment:
Q  116 caaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||||||||||||||||    
T  24046123 caaatgagcgggaaaaaattaggttaaattgctgca 24046088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 28379981 - 28380054
Alignment:
Q  77 tggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||||| |||||| | ||| ||||||||| | |||||||||  ||||| |||||||||||||| ||||    
T  28379981 tggaatttgttaggttaaataattgcaaacctaataaaacaaatgagcaagaaaa-attaggttaaattggtgca 28380054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 8079261 - 8079232
Alignment:
Q  35 caacatgataggaatgaaattggtgcgatg 64  Q
    ||||||||||||||||||||||||||||||    
T  8079261 caacatgataggaatgaaattggtgcgatg 8079232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 8118481 - 8118405
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||| | |||| |||| ||||||||| ||||    
T  8118481 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagc-gaaaaaaattaagttaaattgttgca 8118405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 8397748 - 8397825
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||  |||||| | ||| ||||||||| | |||| |||| | |||| |||||||||||||||||||    
T  8397748 agatgaaatttgttaagttaaataattgcaaacctaataaaacaaacgagcagaaaaaaattaggttaaattgctgca 8397825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 8079395 - 8079327
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||  ||||||  |||||| ||||||||||    
T  8079395 agatggaatttgttaggttaaataattgcaaacctaataaaggtaatgagtaggaaaaaattaggttaa 8079327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 10466644 - 10466612
Alignment:
Q  82 tttgttagattaaattactgctaacctaataca 114  Q
    |||||||| ||||||||||||||||||||||||    
T  10466644 tttgttaggttaaattactgctaacctaataca 10466612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 43762079 - 43761975
Alignment:
Q  42 ataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtta 141  Q
    ||||||||||||||||||||||| |       ||||| |||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||    
T  43762079 ataggaatgaaattggtgcgatgcacttttttagatgaaatttgttagattaaattactgctaacctaatacacaaaatgaaccggaaaatattaggtta 43761980  T
Q  142 aattg 146  Q
    |||||    
T  43761979 aattg 43761975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 1156038 - 1156148
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  1156038 gataagaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 1156137  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  1156138 aaattgctgca 1156148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 44263222 - 44263112
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| ||||||||| |||||||| ||||||||    
T  44263222 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgaacgggaaaaaattaggtt 44263123  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  44263122 aaattgctgca 44263112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 318688 - 318578
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| ||||| ||    
T  318688 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattagatt 318589  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  318588 aaattgctgca 318578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 42492137 - 42492248
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||||| |        |||||||||||||||| |||||| | ||| ||||||||| |||||||||| ||||||| |||||||    
T  42492137 gataggaatgaaattggtgcgatgcattttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagtgggaaaaaattaggt 42492236  T
Q  140 taaattgctgca 151  Q
    ||||||||||||    
T  42492237 taaattgctgca 42492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 51114190 - 51114116
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgct 148  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||||||||||    
T  51114190 agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgct 51114116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 38684148 - 38684038
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||| |||||||||||||||||| |       |||||||||||||||| |||||| |  || ||||||||| ||||||||||||| |||| ||||||||    
T  38684148 gatagaaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataatcgcaaacctaataaagcaaatgagcggaaaaaaattaggtt 38684049  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  38684048 aaattgctgca 38684038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 51114039 - 51113929
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| || |||||| |||||||| ||||||||    
T  51114039 gatatgaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagtaaatgaacgggaaaaaattaggtt 51113940  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  51113939 aaattgctgca 51113929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 5428628 - 5428551
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  5428628 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgca 5428551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 27296466 - 27296360
Alignment:
Q  45 ggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaat 144  Q
    ||||||||||||||||||||||       ||||| |||||||||| |||||| | ||| ||||||||| || ||||||||| ||||| ||||||||||||    
T  27296466 ggaatgaaattggtgcgatgtatttttatagatgaaatttgttaggttaaataattgcaaacctaataaagaaaatgagcgagaaaaaattaggttaaat 27296367  T
Q  145 tgctgca 151  Q
    || ||||    
T  27296366 tgttgca 27296360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 42496939 - 42497016
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| || |||||| | |||||||||||||||| |||||||||||||||||||    
T  42496939 agatggaatttgttaggttaaataattgcaaatctaataaaacaaatgagcgggaaaaaattaggttaaattgctgca 42497016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 42497297 - 42497374
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  42497297 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgca 42497374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 16165658 - 16165766
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||||| |        ||||| |||||||||| |||||| | ||| ||||||||| ||||||||| |||||||| |||||||    
T  16165658 gataggaatgaaattggtgcgatgcattttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgatcgggaaaaaattaggt 16165757  T
Q  140 taaattgct 148  Q
    |||||||||    
T  16165758 taaattgct 16165766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 21617856 - 21617785
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||    
T  21617856 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaatt 21617785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 51113857 - 51113746
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||||| |        ||||| |||||||||| |||||| | ||| || |||||| ||||||||||||| |||| |||||||    
T  51113857 gataggaatgaaattggtgcgatgcattttttttagatgaaatttgttaggttaaataattgcaaatctaataaagcaaatgagcggaaaaaaattaggt 51113758  T
Q  140 taaattgctgca 151  Q
    ||||||||||||    
T  51113757 taaattgctgca 51113746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 5429033 - 5428956
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||| |||||||| |||| ||||| |||||||||||||    
T  5429033 agatggaatttgttagcttaaataattgcaaacctaataaagcagatgagcggaaaaaaattagtttaaattgctgca 5428956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 44262764 - 44262687
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||| ||||| |||||||||| || |||| |||||||||||||||||||    
T  44262764 agatggaatttgttaggttaaataattgcaaacgtaataaagcaaatgagtggaaaaaaattaggttaaattgctgca 44262687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 6537661 - 6537733
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    |||||||||||||||| |||||| | ||| ||||||||| || ||||||||||||||| |||| |||||||||    
T  6537661 agatggaatttgttaggttaaataattgcaaacctaataaagtaaatgagcgggaaaaaattaagttaaattg 6537733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 52740834 - 52740726
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||||| |        |||| ||||||||||  |||||| | ||  ||||||||| |||||||||||||||||| |||||||    
T  52740834 gataggaatgaaattggtgcgatgcattttttttagattgaatttgttaagttaaataattgtaaacctaataaagcaaatgagcgggaaaaaattaggt 52740735  T
Q  140 taaattgct 148  Q
    |||||||||    
T  52740734 taaattgct 52740726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 5429184 - 5429071
Alignment:
Q  42 ataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagc--gggaaaat--attag 137  Q
    ||||||||||||||||||| ||| |       |||||||||||||||| |||||| | ||| ||||||||| ||||| |||||  ||||||||  |||||    
T  5429184 ataggaatgaaattggtgctatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaattgagcgggggaaaataaattag 5429085  T
Q  138 gttaaattgctgca 151  Q
    ||||||||||||||    
T  5429084 gttaaattgctgca 5429071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 3227229 - 3227305
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||||||||||| | |||| |||||||||||||| ||||    
T  3227229 agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagc-gaaaaaaattaggttaaattgatgca 3227305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 27296262 - 27296185
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||| |||| |||||| | ||| ||||||||| ||||||| |||||| ||| |||||||||||||| ||||    
T  27296262 agatggaatttattaggttaaataattgcaaacctaataaagcaaataagcggggaaaaattaggttaaattgttgca 27296185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 28950277 - 28950340
Alignment:
Q  86 ttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctg 149  Q
    |||| |||||| | ||| ||||||||| ||||||| |||||||||| |||||||||||||||||    
T  28950277 ttaggttaaataattgcaaacctaataaagcaaattagcgggaaaaaattaggttaaattgctg 28950340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 51272499 - 51272570
Alignment:
Q  75 gatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    |||||||||| |||| |||||| | ||| ||||||||| ||||||||||| | |||| ||||||||||||||    
T  51272499 gatggaatttattaggttaaataattgcaaacctaataaagcaaatgagcagaaaaaaattaggttaaattg 51272570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 44263409 - 44263333
Alignment:
Q  75 gatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| |||||||||| |||||| | ||| |||||||||  ||||||||||| ||||| ||||||||| |||| ||||    
T  44263409 gatgtaatttgttaggttaaataattgcaaacctaataaggcaaatgagcgagaaaaaattaggttatattgatgca 44263333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 1647678 - 1647566
Alignment:
Q  39 atgataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattagg 138  Q
    ||||||| |||||||||||||||||  |       ||||| |||||||||| |||||| | | | ||||||||| ||||||||||| | ||||  |||||    
T  1647678 atgatagaaatgaaattggtgcgattcatttttttagatgaaatttgttaggttaaataattccaaacctaataaagcaaatgagcagaaaaaacttagg 1647579  T
Q  139 ttaaattgctgca 151  Q
    ||||| |||||||    
T  1647578 ttaaactgctgca 1647566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 18912397 - 18912350
Alignment:
Q  104 aacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||| |||||||| |||| |||| |||||||||||||||||||    
T  18912397 aacctaataaagcaaatgggcggaaaaaaattaggttaaattgctgca 18912350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 28950023 - 28950070
Alignment:
Q  104 aacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||| ||||||||||||| |||| |||||||||||||| ||||    
T  28950023 aacctaataaagcaaatgagcggaaaaaaattaggttaaattgttgca 28950070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 44099676 - 44099747
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    ||||| ||||| |||| |||||| | ||| ||||||||| ||||||||||||  |||| |||||||||||||    
T  44099676 agatgaaatttattaggttaaataattgcaaacctaataaagcaaatgagcgaaaaaaaattaggttaaatt 44099747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 33375721 - 33375656
Alignment:
Q  83 ttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgct 148  Q
    ||||||| |||||| | ||| ||||||||| || ||||||||||  ||| ||||||||||||||||    
T  33375721 ttgttaggttaaataattgcaaacctaataaagtaaatgagcggagaaaaattaggttaaattgct 33375656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 16671738 - 16671628
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  16671738 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 16671639  T
Q  141 aaattgctgca 151  Q
    | |||||||||    
T  16671638 atattgctgca 16671628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 17646106 - 17645996
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  17646106 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 17646007  T
Q  141 aaattgctgca 151  Q
    | |||||||||    
T  17646006 atattgctgca 17645996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 23591386 - 23591496
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  23591386 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 23591485  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  23591486 aaattgttgca 23591496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 4455055 - 4454947
Alignment:
Q  43 taggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    |||||||||||||| ||||||| |       |||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||    
T  4455055 taggaatgaaattgatgcgatgcatttttttagatggaatttgttaggttaaattactgctaacctaatacagcaaattggagggaaaatattaggttaa 4454956  T
Q  143 attgctgca 151  Q
     ||| ||||    
T  4454955 gttgttgca 4454947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 4680901 - 4680978
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4680901 agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 4680978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 11650013 - 11650090
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  11650013 agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgttgca 11650090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 12140833 - 12140943
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| |||||||||  |||||||||||| |||| ||||||||    
T  12140833 gataggaatgaaattggtgcgatgcattcttttagatgaaatttgttaggttaaataattgcaaacctaataacgcaaatgagcggaaaaaaattaggtt 12140932  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  12140933 aaattgctgca 12140943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 18486734 - 18486657
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  18486734 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 18486657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 4681114 - 4681227
Alignment:
Q  39 atgataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattag 137  Q
    ||||||||||||||||||||||||||||        ||||||||||| |||| |||||| | ||| ||| ||||| |||||||||||||||||| |||||    
T  4681114 atgataggaatgaaattggtgcgatgtattttttttagatggaatttattaggttaaataattgcaaacataataaagcaaatgagcgggaaaaaattag 4681213  T
Q  138 gttaaattgctgca 151  Q
    ||||||||| ||||    
T  4681214 gttaaattgttgca 4681227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 18487284 - 18487180
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||||||||||||| |||| |       ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| ||||||||    
T  18487284 gataggaatgaaattggtgtgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 18487185  T
Q  141 aaatt 145  Q
    |||||    
T  18487184 aaatt 18487180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 27716503 - 27716611
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||| |||||||||||||| |       |||||||| ||||||| |||||| | ||| ||||||||| ||||||||||||||| || ||||||||    
T  27716503 gataggaatcaaattggtgcgatgcatttttttagatggaagttgttaggttaaataattgcaaacctaataaagcaaatgagcgggataaaattaggtt 27716602  T
Q  141 aaattgctg 149  Q
    |||||||||    
T  27716603 aaattgctg 27716611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 27716314 - 27716388
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgct 148  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||||||||| ||||||| ||||||||||||||||    
T  27716314 agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagtgggaaaaaattaggttaaattgct 27716388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 48640772 - 48640883
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnn-agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||||| |        ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||||||| | |||||||    
T  48640772 gataggaatgaaattggtgcgatgcattttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaagaaattaggt 48640871  T
Q  140 taaattgctgca 151  Q
    ||||||||||||    
T  48640872 taaattgctgca 48640883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 2354670 - 2354747
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||||||| ||||||| | ||| ||||||||| ||||||||||| |||||| |||| ||||||||||||||    
T  2354670 agatggaatttgttatattaaataattgcaaacctaataaagcaaatgagctggaaaacattacgttaaattgctgca 2354747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 9141966 - 9142043
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  9141966 agatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcaggaaaaaattaggttaaattgctgca 9142043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 43059291 - 43059223
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    ||||||||||||||||||||||| | ||| ||||||||| |||||||||||| ||||| ||||||||||    
T  43059291 agatggaatttgttagattaaataattgcaaacctaataaagcaaatgagcgagaaaaaattaggttaa 43059223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 2526925 - 2527036
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcggg-aaaatattaggt 139  Q
    ||||| |||||||||||||||||| |       ||||| |||| ||||| |||||| | ||| ||||||||| |||||||||||||| |||| |||||||    
T  2526925 gatagaaatgaaattggtgcgatgcatttttttagatgtaattagttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaaattaggt 2527024  T
Q  140 taaattgctgca 151  Q
    ||||||||||||    
T  2527025 taaattgctgca 2527036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 4455467 - 4455390
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||  | || |||||| ||||||||||||||| ||||    
T  4455467 agatggaatttgttaggttaaattgctgctaacctaatgcagcattttagagggaaattattaggttaaattgttgca 4455390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 11646369 - 11646479
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||| ||| |       | |||||||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| ||||| ||    
T  11646369 gataggaatgaaattggtgctatgcatttttttatatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattagatt 11646468  T
Q  141 aaattgctgca 151  Q
    || ||||||||    
T  11646469 aagttgctgca 11646479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 21224271 - 21224161
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||| |||||||||       ||||| || ||||||| |||||| | ||  ||||||||| ||||||| ||||| |||| ||||||||    
T  21224271 gataggaatgaaattgatgcgatgtatttttttagatgaaacttgttaggttaaataattgtaaacctaataaagcaaattagcggaaaaaaattaggtt 21224172  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  21224171 aaattgctgca 21224161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 45419606 - 45419718
Alignment:
Q  39 atgataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattagg 138  Q
    ||||||| |||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| |||||||||||   |||| ||||||    
T  45419606 atgatagaaatgaaattggtgcgatgcatctttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcttaaaaaaattagg 45419705  T
Q  139 ttaaattgctgca 151  Q
    ||||||| |||||    
T  45419706 ttaaattactgca 45419718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 23591594 - 23591713
Alignment:
Q  32 agccaacatgataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaa 131  Q
    |||||| | |||| ||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||  |||||||    
T  23591594 agccaagaggataagaatgaaattggtgcgatgcattttttcagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgaaagggaaaa 23591693  T
Q  132 tattaggttaaattgctgca 151  Q
     ||||| || ||||| ||||    
T  23591694 aattagcttcaattgttgca 23591713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 22324417 - 22324307
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| || ||| | | | ||||||| | || ||||||||||||||  ||||||||    
T  22324417 gataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttgaataattacaaacctaaaaaagtaaatgagcgggaaacaattaggtt 22324318  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  22324317 aaattgctgca 22324307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 22773916 - 22773992
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| ||||||||||||||||| | ||| ||| || || |||||||||||||||||| |||||||||||||| ||||    
T  22773916 agatgaaatttgttagattaaataattgcaaacatagtaaagcaaatgagcgggaaaa-attaggttaaattgttgca 22773992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 32278157 - 32278218
Alignment:
Q  90 attaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||| | ||| ||||||||| || ||||||||||||||| |||||||||||||||||||    
T  32278157 attaaataattgcaaacctaataaagtaaatgagcgggaaaaaattaggttaaattgctgca 32278218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 35124858 - 35124748
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||| |||||||||||| |||||| | ||| ||||||||| ||||||||| ||  |||| |||| |||    
T  35124858 gataggaatgaaattggtgcgatgcatttttttagacggaatttgttaggttaaataattgcaaacctaataaagcaaatgaacgacaaaaaattaagtt 35124759  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  35124758 aaattgttgca 35124748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 11645942 - 11646013
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||| |||||| | | | ||||||||| |||||||||||||||||| |||||||||| ||| ||||    
T  11645942 aatttgttaggttaaataattacaaacctaataaagcaaatgagcgggaaaaaattaggttaagttgttgca 11646013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 11646697 - 11646650
Alignment:
Q  104 aacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  11646697 aacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgca 11646650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 16362696 - 16362774
Alignment:
Q  75 gatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgcata 153  Q
    |||| |||||||||| |||||| ||||| || |||||| | ||||||||||| |||| ||||| ||| |||||||||||    
T  16362696 gatgaaatttgttaggttaaataactgcaaatctaataaaacaaatgagcggaaaaaaattagattacattgctgcata 16362774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 16671346 - 16671269
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt-aaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||| |||||||||| |||| |||||||||||    
T  16671346 agatgaaatttgttaggttaaataattgcaaacctaatagagcaaatgagc-ggaaaatatttggttaaaattgctgca 16671269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 17645714 - 17645637
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt-aaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||| |||||||||| |||| |||||||||||    
T  17645714 agatgaaatttgttaggttaaataattgcaaacctaatagagcaaatgagc-ggaaaatatttggttaaaattgctgca 17645637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 19222206 - 19222128
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgg-gaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||  ||||||||| ||||||||| |||  |||| |||||||||||||||||||    
T  19222206 agatggaatttgttaggttaaataattgtaaacctaataaagcaaatgaacggaaaaaaaattaggttaaattgctgca 19222128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 34837288 - 34837210
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgg-gaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||  ||||||||| ||||||| |||||  |||| |||||||||||||||||||    
T  34837288 agatggaatttgttaggttaaataattgtaaacctaataaagcaaataagcggaaaaaaaattaggttaaattgctgca 34837210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 9142148 - 9142209
Alignment:
Q  84 tgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    |||||| |||||| | ||| |||| |||| |||||||||||||||||| |||||||||||||    
T  9142148 tgttaggttaaataattgcaaaccaaataaagcaaatgagcgggaaaaaattaggttaaatt 9142209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 11646218 - 11646291
Alignment:
Q  78 ggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||| |||||| | ||| ||||||| | |||||||||| || |||| |||||||||| ||||||||    
T  11646218 ggaatttgttaggttaaataattgcaaacctaacaaagcaaatgagtggaaaaaaattaggttaagttgctgca 11646291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 16377432 - 16377509
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||   | || |||||| ||||||||||| || |||||    
T  16377432 agatggaatttgttaggttaaattgctgctaacctaatgcagctttttagagggaaattattaggttaagttactgca 16377509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 45419814 - 45419904
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaa 131  Q
    ||||| |||||||||||||||||| |       |||||||||||||||| |||||| | | | ||||||||| ||||||||||||| ||||    
T  45419814 gatagaaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattacaaacctaataaagcaaatgagcggaaaaa 45419904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 48640993 - 48641095
Alignment:
Q  46 gaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    ||||||||||||||||||| |       ||||| ||||| || | |||||| | ||| ||||||||| |||||||||||||||||| | || ||||||||    
T  48640993 gaatgaaattggtgcgatgcatttttttagatgaaatttttttggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaactatgttaaatt 48641092  T
Q  146 gct 148  Q
    |||    
T  48641093 gct 48641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 16376489 - 16376532
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagca 117  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||    
T  16376489 agatggaatttgttaggttaaattgctgctaacctaatgcagca 16376532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 38694821 - 38694892
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||| | ||||||| ||||||||||||| |||||  | || |||||| ||||||||||| ||||||||    
T  38694821 aatttgttgggttaaattgctgctaacctaatgcagcattttagagggaaattattaggttaagttgctgca 38694892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 40450112 - 40450183
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||| |||||| | ||| || |||||| |||||||||||  ||| | |||||||||||||||||||    
T  40450112 aatttgttaggttaaataattgcaaatctaataaagcaaatgagcacgaataaattaggttaaattgctgca 40450183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 23591238 - 23591276
Alignment:
Q  108 taatacagcaaatgagcgggaaaatattaggttaaattg 146  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  23591238 taataaagcaaatgagcgggaaaaaattaggttaaattg 23591276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 30991560 - 30991482
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgg-gaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||| ||||| |||||||||||||  |||| |||| ||||||||| ||||    
T  30991560 agatggaatttgttaggttaaataattgcaaacataataaagcaaatgagcggaaaaaaaattaagttaaattgttgca 30991482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 16492550 - 16492626
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||| ||||| ||||||||||| |||||| | || ||||||||||||||    
T  16492550 agatgaaatttgttaggttaaataattgcaaacataataaagcaaatgagc-ggaaaaaaataagttaaattgctgca 16492626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 21128136 - 21128063
Alignment:
Q  78 ggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||| |||||| | ||  ||| ||||| ||||||| ||||| |||| ||||||||||| |||||||    
T  21128136 ggaatttgttaggttaaataaatggaaacgtaataaagcaaatcagcggaaaaagattaggttaaactgctgca 21128063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 46264288 - 46264345
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaa 131  Q
    |||| ||||||||||| |||||| | ||| ||||||||| |||||||||| |||||||    
T  46264288 agatagaatttgttaggttaaataattgcaaacctaataaagcaaatgagggggaaaa 46264345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 48641447 - 48641523
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||| ||||| ||||||||||| |||||| |||||||||| || |||||    
T  48641447 agatgaaatttgttaggttaaataattgcaaacttaataaagcaaatgagcaggaaaa-attaggttaagttcctgca 48641523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 9829052 - 9828942
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||| |||    
T  9829052 gataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaagtt 9828953  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  9828952 aaattgctgca 9828942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 23902607 - 23902530
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| ||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23902607 agatagaatttgttaggttaaattactggtaacctaatacaacaaatgaacgggaaaatattaggttaaattgctgca 23902530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 17200086 - 17200012
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgct 148  Q
    ||||| ||||| |||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  17200086 agatgaaatttattaggttaaattactgttaacctaatatagcaaatgagagggaaaatattaggttaaattgct 17200012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 25068322 - 25068211
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaattt-gttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||||||||||| |       ||||||||||| ||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||||||    
T  25068322 gataggaatgaaattggtgcgatgcatttttttagatggaattttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggt 25068223  T
Q  140 taaattgctgca 151  Q
    ||||||||||||    
T  25068222 taaattgctgca 25068211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 4811068 - 4811145
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||| ||||| |||||| | ||| ||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  4811068 agatggaattagttaggttaaataattgcaaacctaataaagcaaacgagcgggaaaaaattaggttaaattgctgca 4811145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 17202950 - 17202873
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| || |||||| |||||||| ||||||||| |||||||||||||||||||    
T  17202950 agatggaatttgttaggttaaataattgcaaatctaataaagcaaatgggcgggaaaaaattaggttaaattgctgca 17202873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 17906806 - 17906883
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | | | ||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  17906806 agatggaatttgttaggttaaataattacaaacctaataaagcaaatgagctggaaaaaattaggttaaattgctgca 17906883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 25068095 - 25067985
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||  |||||| | ||| ||||| ||| ||||||||||||| |||| ||||||||    
T  25068095 gataggaatgaaattggtgcgatgcatttttttagatgtaatttgttatgttaaataattgcaaaccttataaagcaaatgagcggaaaaaaattaggtt 25067996  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  25067995 aaattgctgca 25067985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 17011183 - 17011132
Alignment:
Q  100 tgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  17011183 tgctaacataatacatcaaatgagcgggaaaatattaggttaaattgctgca 17011132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 17080135 - 17080058
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||  |  ||||||||||||||||  ||||||||    
T  17080135 agatagaatttgttaggttaaattaatgctaacctaatacagcaaattggacggaaaatattaggttaggttgctgca 17080058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 27579698 - 27579621
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| ||||||||||| |||||| | ||| ||||||||| |||||||||| ||||||| |||||||||||||| ||||    
T  27579698 agattgaatttgttaggttaaataattgcaaacctaataaagcaaatgagtgggaaaaaattaggttaaattgttgca 27579621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 8685236 - 8685186
Alignment:
Q  86 ttagattaaattactgctaacctaatacagcaaatgagcgggaaaatatta 136  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  8685236 ttaggttaaattattgctaacataatacagcaaatgagcgggaaaatatta 8685186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 17202731 - 17202661
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcg-ggaaaatattaggttaaa 143  Q
    ||||||||||||||||||||||| | ||| ||||||||| |||||||||||| | |||| |||||||||||    
T  17202731 agatggaatttgttagattaaataattgcaaacctaataaagcaaatgagcgtgaaaaaaattaggttaaa 17202661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 23610565 - 23610455
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcggg-aaaatattaggt 139  Q
    ||||| |||||||||||||||||| |       |||||||||||||||| |||||| | ||  ||||||||| |||||||||||||| |||| |||||||    
T  23610565 gatagaaatgaaattggtgcgatgcatttttgtagatggaatttgttaggttaaataattga-aacctaataaagcaaatgagcgggaaaaaaattaggt 23610467  T
Q  140 taaattgctgca 151  Q
    ||||||| ||||    
T  23610466 taaattgttgca 23610455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 17201730 - 17201620
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||| |||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| | ||||||||||| ||||  |||||||    
T  17201730 gatagcaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaaacaaatgagcggaaaaaagttaggtt 17201631  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  17201630 aaattgttgca 17201620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 808601 - 808495
Alignment:
Q  44 aggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaa 143  Q
    ||||||||||||||||||||| |       |||| |||||||| || |||||| | ||| || |||||| |||||||||||| ||||| |||| ||||||    
T  808601 aggaatgaaattggtgcgatgcaattttttagatagaatttgtaag-ttaaataattgcaaatctaataaagcaaatgagcgagaaaaaattacgttaaa 808503  T
Q  144 ttgctgca 151  Q
    ||||||||    
T  808502 ttgctgca 808495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 808930 - 808852
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaata-ttaggttaaattgctgca 151  Q
    ||||| |||||||| | |||||| | ||| ||||||||| |||||||||| ||||||| | ||||||||||||||||||    
T  808930 agatgaaatttgtttggttaaataattgcaaacctaataaagcaaatgagtgggaaaaaaattaggttaaattgctgca 808852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 8674557 - 8674507
Alignment:
Q  86 ttagattaaattactgctaacctaatacagcaaatgagcgggaaaatatta 136  Q
    |||| |||||||| ||||||| ||||||||||||| |||||||||||||||    
T  8674557 ttaggttaaattattgctaacataatacagcaaataagcgggaaaatatta 8674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 17200424 - 17200347
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| ||||||| ||||||||||| | |||||  | ||  ||||| ||||||||||| ||||||||    
T  17200424 agatggaatttgttaggttaaattgctgctaacctattgcagcattttagaaggaaattattaggttaagttgctgca 17200347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 23622312 - 23622247
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    |||||||||| |||||| | ||| ||||||||| |||||||||| |||||||  ||||||||||||    
T  23622312 aatttgttaggttaaataattgcaaacctaataaagcaaatgagtgggaaaaagttaggttaaatt 23622247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 24223530 - 24223607
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||||||||  |||||| |||||||| |||| |||||  | || |||||| ||||||||||| ||||||||    
T  24223530 agatggaatttgttaggctaaattgctgctaacttaatgcagcattttagagggaaattattaggttaagttgctgca 24223607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 17200511 - 17200468
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagca 117  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||    
T  17200511 agatggaatttgttaggttaaattgctgctaacctaatgcagca 17200468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 29201624 - 29201581
Alignment:
Q  108 taatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||    
T  29201624 taataaagcaaatgagcggaaaaaaattaggttaaattgctgca 29201581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 4100293 - 4100401
Alignment:
Q  47 aatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagca----aatgagcgggaaaatattaggttaa 142  Q
    |||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||| ||||| ||||    ||||| ||| |||| ||||||||||    
T  4100293 aatgaaattggtgcgatgcatttttttagatggaatttgttagcttaaataattgcaaacataataaagcaaattaatgaacggaaaaaaattaggttaa 4100392  T
Q  143 attgctgca 151  Q
    |||||||||    
T  4100393 attgctgca 4100401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 24223166 - 24223240
Alignment:
Q  77 tggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||||| |||||||  |||||||||||| |||||  | || |||||| ||||||||||| ||| ||||    
T  24223166 tggaatttgttaggttaaattgttgctaacctaatgcagcatttaagagggaaattattaggttaagttgatgca 24223240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 32208413 - 32208490
Alignment:
Q  74 agatggaatttgttagattaaattact-gctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| ||||| || | || ||||||||| ||||||||||| |||||| ||||| |||||||| ||||    
T  32208413 agatggaatttgttaggttaaaataattgcaaacctaataaagcaaatgagc-ggaaaaaattagattaaattgttgca 32208490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 17080390 - 17080361
Alignment:
Q  35 caacatgataggaatgaaattggtgcgatg 64  Q
    ||||||||||||||||||||||||||||||    
T  17080390 caacatgataggaatgaaattggtgcgatg 17080361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 17203747 - 17203678
Alignment:
Q  82 tttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||| ||||||| ||||||||||||| |||||  | || |||||| ||||||||||| ||| ||||    
T  17203747 tttgttaggttaaattgctgctaacctaatgcagcattttagagggaaattattaggttaagttgttgca 17203678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 27315386 - 27315310
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| ||||||||||| |||||| | ||| ||||||||| ||||||| ||  |||||| |||||||||| ||||||||    
T  27315386 agattgaatttgttaggttaaataattgcaaacctaataaagcaaattag-tggaaaaaattaggttaagttgctgca 27315310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 9e-22; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 11454663 - 11454586
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  11454663 agatggaatttgttaggttaaatgattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 11454586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 40050982 - 40050873
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    ||||||||| |||||||||||||| |       ||||| |||||||||| |||||||| ||| ||||||||| |||||||||||||||||| ||||||||    
T  40050982 gataggaattaaattggtgcgatgcatttttgtagatg-aatttgttaggttaaattattgcaaacctaataaagcaaatgagcgggaaaaaattaggtt 40050884  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  40050883 aaattgctgca 40050873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 46451603 - 46451493
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| ||||||||| |||||||| ||||||||    
T  46451603 gataggaatgaaattggtgcgatgcattattttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgaacgggaaaaaattaggtt 46451504  T
Q  141 aaattgctgca 151  Q
    ||||| |||||    
T  46451503 aaattactgca 46451493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 47503026 - 47503136
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| |||||||||  ||||||||||||||||| ||||||||    
T  47503026 gataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataatgcaaatgagcgggaaaaaattaggtt 47503125  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  47503126 aaattgctgca 47503136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 36643133 - 36643212
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgcata 153  Q
    |||||||||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  36643133 agatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattgctgcata 36643212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 52300809 - 52300747
Alignment:
Q  76 atggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattagg 138  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  52300809 atggaatttgttaggttaaattactgctaacctaatacagtaaatgagcgggaaaaaattagg 52300747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 837176 - 837286
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       |||||||||||||||| |||||| | ||| ||||||||| ||||||||||||| |||| ||||||||    
T  837176 gataagaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggtt 837275  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  837276 aaattgttgca 837286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 11220876 - 11220800
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  11220876 agatgaaatttgttaggtaaaattactgctaacctaatacagcaaataag-ggaaaaatattaggttaaattgctgca 11220800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 18095056 - 18094979
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  18095056 agatggaatttgttaggttaaatcattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgatgca 18094979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 43819416 - 43819351
Alignment:
Q  86 ttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| |||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43819416 ttaggttaaattagtgttaacttaatacagcaaatgagcgggaaaatattaggttaaattgctgca 43819351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 38887377 - 38887448
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||| |||||| | ||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  38887377 aatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 38887448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 43017371 - 43017294
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||| |||||| | ||| ||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  43017371 agatgaaatttgttaggttaaataattgcaaacttaataaagcaaatgagcgggaaaaaattaggttaaattgctgca 43017294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 16015256 - 16015327
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    |||| ||||||||||| |||||| | || |||||||||| |||||||||||||||||| |||||||||||||    
T  16015256 agatagaatttgttaggttaaataattgttaacctaataaagcaaatgagcgggaaaaaattaggttaaatt 16015327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 21969013 - 21969059
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaat 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21969013 agatggaatttgttaggttaaattactgctaacctaatacagcaaat 21969059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 21991449 - 21991495
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaat 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21991449 agatggaatttgttaggttaaattactgctaacctaatacagcaaat 21991495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 20877189 - 20877299
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| |||||| ||  | ||||||||| || ||||||| ||||||| ||||| ||    
T  20877189 gataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataacgacaaacctaataaagtaaatgagagggaaaaaattagatt 20877288  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  20877289 aaattgctgca 20877299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 47503199 - 47503289
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaa 131  Q
    |||||||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| ||||||||| ||||||||||||||||||    
T  47503199 gataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaa 47503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 37760596 - 37760520
Alignment:
Q  75 gatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| |||||||||| |||||| | ||| ||||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  37760596 gatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagcgggaaaaatttaggttaaattgttgca 37760520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 38887551 - 38887663
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgg--gaaaatattagg 138  Q
    ||||||||||||||| |||||||| |       ||| |||||||||||| |||||| | ||| ||||||||| |||||||||||||   |||| ||||||    
T  38887551 gataggaatgaaatttgtgcgatgcatttttttagaaggaatttgttaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaaaattagg 38887650  T
Q  139 ttaaattgctgca 151  Q
    |||||||||||||    
T  38887651 ttaaattgctgca 38887663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 18094839 - 18094764
Alignment:
Q  76 atggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||| ||||||||| |||||| | ||| ||||||||| ||||||| |||||||||| |||| ||||||||||||||    
T  18094839 atgggatttgttaggttaaataattgcaaacctaataaagcaaattagcgggaaaaaattaagttaaattgctgca 18094764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 53047599 - 53047670
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||| |||||| | ||| ||||||| | |||||||||||||||||| |||| ||||||||||||||    
T  53047599 aatttgttaggttaaataattgcaaacctaacaaagcaaatgagcgggaaaaaattatgttaaattgctgca 53047670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 35560235 - 35560124
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaata-ttaggt 139  Q
    |||||||||||||||||||||||| |        |||| |||||||||| |||||| | ||| ||||||||| |||||||||| || |||| | ||||||    
T  35560235 gataggaatgaaattggtgcgatgcatttttttggatgaaatttgttaggttaaataattgcaaacctaataaagcaaatgagaggaaaaaaaattaggt 35560136  T
Q  140 taaattgctgca 151  Q
    ||||||||||||    
T  35560135 taaattgctgca 35560124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 11454338 - 11454228
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||| ||||||||||||||||||| |       ||||| |||||||||| |||||| | ||| |||| |||| || | ||||||||||||| ||||||||    
T  11454338 gatatgaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaaccaaataaagtagatgagcgggaaaaaattaggtt 11454239  T
Q  141 aaattgctgca 151  Q
    |||||| ||||    
T  11454238 aaattgttgca 11454228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 3847888 - 3847848
Alignment:
Q  111 tacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3847888 tacagcaaatgagcgcgaaaatattaggttaaattgctgca 3847848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 17755836 - 17755760
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgc 150  Q
    |||||||||||||||| ||||||| ||||||| ||||| || ||  | || |||||| |||||||||||||||||||    
T  17755836 agatggaatttgttaggttaaattgctgctaatctaatgcaacattttagagggaaattattaggttaaattgctgc 17755760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 19057156 - 19057080
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgc 150  Q
    |||||||||||||||| ||||||| ||||||| ||||| || ||  | || |||||| |||||||||||||||||||    
T  19057156 agatggaatttgttaggttaaattgctgctaatctaatgcaacattttagagggaaattattaggttaaattgctgc 19057080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 38887806 - 38887878
Alignment:
Q  79 gaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||||||||  |||||| | ||| ||||||||| ||||||||||||| |||| ||||||||||||| |||||    
T  38887806 gaatttgttacgttaaataattgcaaacctaataaagcaaatgagcggaaaaaaattaggttaaattactgca 38887878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 24365834 - 24365763
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    ||||| |||| ||||| |||||| | ||| ||||||||| | |||||||||||||||| |||||||||||||    
T  24365834 agatgaaattcgttaggttaaataattgcaaacctaataaatcaaatgagcgggaaaaaattaggttaaatt 24365763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 47519894 - 47519937
Alignment:
Q  108 taatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  47519894 taataaagcaaatgagcgggaaaaaattaggttaaattgctgca 47519937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 47520026 - 47519955
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaatt 145  Q
    ||||||| || ||||| |||||| | ||| | ||||||| |||||||||||||||||| |||||||||||||    
T  47520026 agatggacttggttaggttaaataattgcaaccctaataaagcaaatgagcgggaaaaaattaggttaaatt 47519955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 25917446 - 25917523
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| ||||||| |||||||||||||  | ||  | || |||||| ||||||||||| ||||||||    
T  25917446 agatggaatttgttaggttaaattgctgctaacctaatgtaacattttagagggaaattattaggttaagttgctgca 25917523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 51654138 - 51654074
Alignment:
Q  80 aatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaat 144  Q
    |||||||||| |||||| | ||  ||||||||| | |||||||||||||||| ||||||||||||    
T  51654138 aatttgttaggttaaataattgtaaacctaataaaacaaatgagcgggaaaaaattaggttaaat 51654074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 9240813 - 9240890
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||||  || ||||||||| |||||  | || |||||| ||||||||||| ||| ||||    
T  9240813 agatggaatttgttaggttaaattgttgttaacctaatgcagcattttagagggaaattattaggttaagttgttgca 9240890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 25937829 - 25937792
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaat 111  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  25937829 agatggaatttgttaggttaaattgctgctaacctaat 25937792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 196672 - 196781
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgg-gaaaatattaggt 139  Q
    ||||||| |||||||||||||||| |       |||||||||||||||| |||||||||  |||||||||||||||||||||||||  ||||||||||||    
T  196672 gataggagtgaaattggtgcgatgcatttttttagatggaatttgttaggttaaattacacctaacctaatacagcaaatgagcggaaaaaatattaggt 196771  T
Q  140 taaattgctg 149  Q
    ||||| ||||    
T  196772 taaatggctg 196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 163775 - 163885
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggtt 140  Q
    |||||||| ||||||||||||||| |       ||||||||||| |||| |||||| | ||| ||||||||| ||||||||||||| |||| | ||||||    
T  163775 gataggaacgaaattggtgcgatgcattttttcagatggaatttattaggttaaataattgcaaacctaataaagcaaatgagcggaaaaaaagtaggtt 163874  T
Q  141 aaattgctgca 151  Q
    |||||||||||    
T  163875 aaattgctgca 163885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 102836 - 102738
Alignment:
Q  41 gataggaatgaaattggtgcgatgtannnnnnnagatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggt 139  Q
    |||||||||||||||| ||||||| |       |||||||||||||||| |||||| | ||| ||| ||||| |||||||||||||||||| |||||||    
T  102836 gataggaatgaaattgatgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacttaataaagcaaatgagcgggaaaaaattaggt 102738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 958 - 1018
Alignment:
Q  82 tttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    |||||||| |||||||| || |||||||||| |||||||||| ||||||||||||||||||    
T  958 tttgttaggttaaattagtgataacctaataaagcaaatgagagggaaaatattaggttaa 1018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 9259 - 9199
Alignment:
Q  82 tttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    |||||||| |||||||| || |||||||||| |||||||||| ||||||||||||||||||    
T  9259 tttgttaggttaaattagtgataacctaataaagcaaatgagagggaaaatattaggttaa 9199  T

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Target: scaffold0105 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 29721 - 29781
Alignment:
Q  82 tttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaa 142  Q
    |||||||| |||||||| || |||||||||| |||||||||| ||||||||||||||||||    
T  29721 tttgttaggttaaattagtgataacctaataaagcaaatgagagggaaaatattaggttaa 29781  T

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Target: scaffold0294 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 12399 - 12468
Alignment:
Q  82 tttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||| |||||| | ||| ||||||||| | ||||||||||| |||| |||||||||||||||||||    
T  12399 tttgttaggttaaataattgcaaacctaataaaacaaatgagcggaaaaaaattaggttaaattgctgca 12468  T

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Target: scaffold0240 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 13192 - 13115
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaatattaggttaaattgctgca 151  Q
    |||||||||||||||| |||||| |  || ||||||||| | ||||||||||| |||| |||||||||||||| ||||    
T  13192 agatggaatttgttaggttaaataatggcaaacctaataaaccaaatgagcggaaaaaaattaggttaaattgttgca 13115  T

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Target: scaffold0504 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 1539 - 1617
Alignment:
Q  74 agatggaatttgttagattaaattactgctaacctaatacagcaaatgagcgggaaaata-ttaggttaaattgctgca 151  Q
    ||||||||||| |||| |||||| | ||| ||| ||||| |||||||||| ||||||| | |||| |||||||||||||    
T  1539 agatggaatttattaggttaaataattgcaaacttaataaagcaaatgagtgggaaaaaatttagattaaattgctgca 1617  T

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