View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3092_low_5 (Length: 314)

Name: NF3092_low_5
Description: NF3092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3092_low_5
NF3092_low_5
[»] chr5 (41 HSPs)
chr5 (210-314)||(41093085-41093189)
chr5 (213-314)||(41092906-41093006)
chr5 (210-314)||(43394969-43395072)
chr5 (210-314)||(16528945-16529047)
chr5 (210-314)||(26523271-26523375)
chr5 (210-314)||(16529121-16529225)
chr5 (210-314)||(35159690-35159793)
chr5 (210-312)||(11313965-11314068)
chr5 (220-314)||(7127555-7127649)
chr5 (220-314)||(19121903-19121997)
chr5 (220-314)||(19122239-19122333)
chr5 (210-314)||(16528763-16528871)
chr5 (1-86)||(41100569-41100651)
chr5 (224-314)||(12442168-12442258)
chr5 (220-314)||(26523175-26523269)
chr5 (218-314)||(24351487-24351583)
chr5 (219-314)||(11313635-11313730)
chr5 (217-314)||(16526190-16526288)
chr5 (213-314)||(16528589-16528690)
chr5 (219-314)||(23138027-23138121)
chr5 (220-314)||(9488085-9488179)
chr5 (229-314)||(11313807-11313892)
chr5 (219-314)||(7673234-7673330)
chr5 (218-314)||(31487099-31487195)
chr5 (219-313)||(35159414-35159506)
chr5 (220-312)||(16305344-16305434)
chr5 (247-308)||(24326548-24326609)
chr5 (247-308)||(24350732-24350793)
chr5 (247-308)||(24351286-24351347)
chr5 (253-314)||(24350934-24350995)
chr5 (223-306)||(13035227-13035310)
chr5 (223-306)||(13105202-13105285)
chr5 (220-314)||(10409521-10409615)
chr5 (219-314)||(26523451-26523547)
chr5 (253-314)||(43395146-43395207)
chr5 (224-314)||(14166198-14166289)
chr5 (224-314)||(31486851-31486941)
chr5 (213-267)||(7673102-7673156)
chr5 (224-267)||(38268880-38268923)
chr5 (216-265)||(14854324-14854373)
chr5 (219-272)||(22431580-22431633)
[»] chr4 (48 HSPs)
chr4 (220-313)||(24049561-24049654)
chr4 (219-314)||(28379777-28379872)
chr4 (213-314)||(47631528-47631628)
chr4 (210-314)||(43161756-43161860)
chr4 (210-314)||(48076354-48076458)
chr4 (223-314)||(47631359-47631450)
chr4 (217-314)||(48076183-48076280)
chr4 (221-314)||(54653665-54653758)
chr4 (219-314)||(22292893-22292988)
chr4 (219-314)||(28379988-28380082)
chr4 (211-314)||(36639332-36639435)
chr4 (219-314)||(44500667-44500762)
chr4 (220-314)||(53144861-53144955)
chr4 (221-314)||(36639169-36639262)
chr4 (218-314)||(7796779-7796875)
chr4 (219-311)||(7821514-7821606)
chr4 (210-314)||(48076531-48076635)
chr4 (219-314)||(8397758-8397853)
chr4 (221-312)||(23952522-23952613)
chr4 (219-314)||(47768947-47769042)
chr4 (218-314)||(52689634-52689730)
chr4 (224-312)||(7809348-7809436)
chr4 (222-314)||(29967177-29967269)
chr4 (223-314)||(23952796-23952887)
chr4 (219-314)||(28813220-28813314)
chr4 (224-314)||(4941678-4941768)
chr4 (222-312)||(7821301-7821391)
chr4 (218-314)||(8118377-8118471)
chr4 (234-314)||(22292701-22292781)
chr4 (235-314)||(8118608-8118687)
chr4 (223-314)||(12796136-12796227)
chr4 (223-314)||(21585572-21585663)
chr4 (224-314)||(2177264-2177354)
chr4 (224-314)||(28389787-28389877)
chr4 (217-282)||(24046058-24046123)
chr4 (221-314)||(8079295-8079385)
chr4 (255-314)||(21581292-21581351)
chr4 (217-295)||(15456285-15456363)
chr4 (217-295)||(15463669-15463747)
chr4 (224-301)||(2481677-2481754)
chr4 (253-312)||(7809561-7809620)
chr4 (224-312)||(32010701-32010789)
chr4 (252-314)||(43161941-43162003)
chr4 (278-310)||(24049337-24049369)
chr4 (210-241)||(21585467-21585498)
chr4 (223-272)||(2526940-2526989)
chr4 (274-314)||(8479159-8479198)
chr4 (213-265)||(47428306-47428358)
[»] chr7 (51 HSPs)
chr7 (217-314)||(9141976-9142073)
chr7 (219-314)||(11650023-11650118)
chr7 (220-314)||(18486630-18486724)
chr7 (220-314)||(40450116-40450210)
chr7 (219-314)||(23591429-23591524)
chr7 (219-314)||(48640816-48640911)
chr7 (220-314)||(4680911-4681005)
chr7 (218-314)||(27716546-27716642)
chr7 (210-309)||(48641036-48641135)
chr7 (220-314)||(9142148-9142242)
chr7 (217-314)||(27716324-27716421)
chr7 (218-314)||(11645946-11646042)
chr7 (219-314)||(21224133-21224228)
chr7 (224-313)||(2526969-2527059)
chr7 (220-314)||(12140876-12140970)
chr7 (217-314)||(11646412-11646509)
chr7 (222-314)||(45419651-45419743)
chr7 (216-307)||(2354687-2354778)
chr7 (220-314)||(16492560-16492653)
chr7 (224-314)||(16671605-16671695)
chr7 (224-314)||(17645973-17646063)
chr7 (217-302)||(11646620-11646705)
chr7 (218-314)||(22773926-22774021)
chr7 (220-307)||(32278158-32278245)
chr7 (220-314)||(34837183-34837278)
chr7 (220-314)||(23591646-23591740)
chr7 (220-314)||(35124721-35124815)
chr7 (253-314)||(18487180-18487241)
chr7 (219-314)||(16671241-16671336)
chr7 (219-314)||(17645609-17645704)
chr7 (219-314)||(19222100-19222196)
chr7 (218-314)||(22324278-22324374)
chr7 (220-314)||(46264298-46264393)
chr7 (225-314)||(45419857-45419947)
chr7 (224-314)||(48641457-48641546)
chr7 (247-312)||(4681162-4681227)
chr7 (226-314)||(11646224-11646312)
chr7 (223-314)||(34837441-34837531)
chr7 (220-314)||(21128036-21128130)
chr7 (217-314)||(30991452-30991550)
chr7 (218-314)||(2853232-2853329)
chr7 (256-314)||(43059223-43059281)
chr7 (247-314)||(1566523-1566591)
chr7 (219-290)||(23591238-23591309)
chr7 (223-314)||(4681613-4681700)
chr7 (218-314)||(4454918-4455014)
chr7 (219-267)||(34837383-34837431)
chr7 (278-314)||(40686907-40686943)
chr7 (231-314)||(16362705-16362788)
chr7 (219-267)||(34837650-34837698)
chr7 (220-265)||(4455363-4455408)
[»] chr3 (37 HSPs)
chr3 (219-314)||(38887381-38887476)
chr3 (221-314)||(18094953-18095046)
chr3 (210-314)||(11454548-11454653)
chr3 (210-314)||(46451456-46451560)
chr3 (220-314)||(18094737-18094831)
chr3 (220-314)||(36643143-36643237)
chr3 (221-314)||(47503069-47503162)
chr3 (219-314)||(837219-837314)
chr3 (219-314)||(40050845-40050940)
chr3 (219-314)||(43017266-43017361)
chr3 (224-314)||(53047603-53047693)
chr3 (210-314)||(11454367-11454473)
chr3 (220-314)||(11454201-11454295)
chr3 (228-314)||(37760501-37760587)
chr3 (219-314)||(38887594-38887691)
chr3 (220-314)||(38887811-38887905)
chr3 (228-313)||(47519871-47519956)
chr3 (219-314)||(11522527-11522622)
chr3 (220-314)||(16015266-16015360)
chr3 (218-312)||(45514437-45514530)
chr3 (218-313)||(24365735-24365823)
chr3 (224-314)||(35560101-35560192)
chr3 (218-314)||(47503242-47503339)
chr3 (253-313)||(47519955-47520015)
chr3 (220-314)||(11453933-11454028)
chr3 (254-314)||(51654074-51654134)
chr3 (223-314)||(20877232-20877323)
chr3 (226-312)||(43819330-43819416)
chr3 (210-267)||(46451238-46451295)
chr3 (261-314)||(46451320-46451373)
chr3 (220-284)||(3847821-3847885)
chr3 (279-314)||(54274787-54274822)
chr3 (220-314)||(46451074-46451165)
chr3 (252-307)||(850960-851015)
chr3 (227-314)||(11220780-11220866)
chr3 (218-314)||(21969023-21969118)
chr3 (218-314)||(21991459-21991554)
[»] chr2 (37 HSPs)
chr2 (219-314)||(28612249-28612344)
chr2 (219-314)||(28611824-28611919)
chr2 (221-312)||(10129515-10129606)
chr2 (223-312)||(28612039-28612128)
chr2 (218-314)||(41995769-41995865)
chr2 (210-312)||(44543733-44543835)
chr2 (217-314)||(11735903-11735999)
chr2 (218-314)||(627531-627627)
chr2 (210-314)||(29550119-29550227)
chr2 (219-312)||(28612464-28612556)
chr2 (219-312)||(44256468-44256561)
chr2 (210-314)||(29549944-29550048)
chr2 (213-312)||(5001539-5001638)
chr2 (251-314)||(5001715-5001778)
chr2 (219-314)||(28612673-28612766)
chr2 (218-307)||(6348066-6348155)
chr2 (225-307)||(5013219-5013301)
chr2 (220-314)||(37131504-37131597)
chr2 (227-312)||(41326372-41326457)
chr2 (219-314)||(3249598-3249693)
chr2 (220-314)||(28612884-28612979)
chr2 (220-314)||(12898019-12898113)
chr2 (219-312)||(44543944-44544037)
chr2 (220-314)||(3249815-3249909)
chr2 (252-314)||(11736329-11736391)
chr2 (218-312)||(29549785-29549879)
chr2 (223-312)||(12896444-12896533)
chr2 (223-295)||(2132238-2132310)
chr2 (274-312)||(5001392-5001430)
chr2 (274-312)||(5013062-5013100)
chr2 (210-259)||(44543574-44543623)
chr2 (210-255)||(5001268-5001313)
chr2 (210-255)||(5012938-5012983)
chr2 (277-314)||(627629-627666)
chr2 (269-314)||(6347938-6347982)
chr2 (210-238)||(5001436-5001464)
chr2 (210-238)||(5013106-5013134)
[»] chr8 (49 HSPs)
chr8 (220-314)||(23830961-23831055)
chr8 (219-314)||(13797437-13797532)
chr8 (223-314)||(23828143-23828234)
chr8 (219-314)||(1197873-1197968)
chr8 (224-312)||(23085860-23085948)
chr8 (223-314)||(29580054-29580145)
chr8 (219-314)||(3459151-3459246)
chr8 (224-314)||(23838358-23838449)
chr8 (220-314)||(37410088-37410182)
chr8 (217-314)||(23960598-23960694)
chr8 (220-314)||(32062811-32062907)
chr8 (218-314)||(37198314-37198410)
chr8 (227-314)||(27853686-27853773)
chr8 (220-314)||(30439058-30439155)
chr8 (220-293)||(23838173-23838246)
chr8 (223-314)||(35617680-35617772)
chr8 (217-312)||(37198131-37198227)
chr8 (226-314)||(39922104-39922192)
chr8 (219-314)||(23960816-23960910)
chr8 (252-314)||(38111372-38111434)
chr8 (220-314)||(40399510-40399604)
chr8 (210-314)||(37197922-37198032)
chr8 (252-314)||(34947504-34947566)
chr8 (210-280)||(39921960-39922030)
chr8 (221-314)||(44429047-44429140)
chr8 (210-314)||(44429210-44429314)
chr8 (218-314)||(33198827-33198923)
chr8 (210-314)||(44430053-44430157)
chr8 (210-314)||(44433788-44433892)
chr8 (256-314)||(18308261-18308319)
chr8 (210-267)||(37197791-37197848)
chr8 (210-314)||(604692-604795)
chr8 (218-314)||(37426110-37426206)
chr8 (220-314)||(43419046-43419136)
chr8 (210-314)||(44430404-44430508)
chr8 (210-314)||(44433962-44434066)
chr8 (210-294)||(44434139-44434223)
chr8 (219-314)||(2084871-2084966)
chr8 (220-314)||(33198599-33198691)
chr8 (224-314)||(37197695-37197783)
chr8 (210-314)||(44430227-44430331)
chr8 (279-314)||(1276539-1276574)
chr8 (210-314)||(604518-604623)
chr8 (220-314)||(42045633-42045727)
chr8 (210-313)||(604344-604448)
chr8 (220-272)||(34345140-34345192)
chr8 (210-313)||(44429383-44429485)
chr8 (219-267)||(39922229-39922277)
chr8 (218-314)||(44433623-44433719)
[»] chr1 (48 HSPs)
chr1 (217-314)||(42492181-42492278)
chr1 (218-314)||(5428522-5428618)
chr1 (210-314)||(42497307-42497411)
chr1 (210-314)||(51113892-51113996)
chr1 (210-314)||(51114076-51114180)
chr1 (213-314)||(27296326-27296427)
chr1 (217-314)||(44263303-44263400)
chr1 (210-314)||(42496949-42497053)
chr1 (219-314)||(3227239-3227333)
chr1 (219-314)||(16165702-16165797)
chr1 (224-314)||(21617756-21617846)
chr1 (220-314)||(38684011-38684105)
chr1 (222-312)||(51272510-51272600)
chr1 (218-314)||(1647537-1647633)
chr1 (210-314)||(5428919-5429023)
chr1 (210-301)||(28950016-28950107)
chr1 (223-314)||(44263088-44263179)
chr1 (220-314)||(318551-318645)
chr1 (220-314)||(51113719-51113813)
chr1 (220-314)||(52740696-52740790)
chr1 (221-314)||(1156081-1156174)
chr1 (220-314)||(5429044-5429142)
chr1 (220-312)||(27296158-27296250)
chr1 (221-312)||(28950277-28950368)
chr1 (219-314)||(44262659-44262754)
chr1 (228-314)||(6537671-6537757)
chr1 (213-312)||(24595224-24595316)
chr1 (210-308)||(42497133-42497231)
chr1 (221-314)||(33375627-33375720)
chr1 (225-314)||(4100601-4100691)
chr1 (219-295)||(6537465-6537541)
chr1 (223-314)||(18912326-18912418)
chr1 (226-314)||(28949908-28949995)
chr1 (219-309)||(30083973-30084064)
chr1 (253-312)||(44099688-44099747)
chr1 (232-312)||(4100810-4100890)
chr1 (226-314)||(28950186-28950274)
chr1 (224-314)||(18912215-18912306)
chr1 (223-314)||(42497484-42497575)
chr1 (275-314)||(45417616-45417655)
chr1 (256-314)||(52584966-52585024)
chr1 (210-279)||(42492280-42492349)
chr1 (278-314)||(12115359-12115395)
chr1 (220-264)||(47790692-47790736)
chr1 (252-314)||(24595086-24595150)
chr1 (223-264)||(52740914-52740955)
chr1 (219-314)||(43761941-43762037)
chr1 (220-272)||(48552993-48553045)
[»] chr6 (25 HSPs)
chr6 (220-314)||(17906816-17906910)
chr6 (220-314)||(27579594-27579688)
chr6 (213-314)||(23622207-23622308)
chr6 (217-314)||(17202843-17202940)
chr6 (222-314)||(25068186-25068278)
chr6 (213-314)||(32208423-32208524)
chr6 (220-313)||(4811079-4811172)
chr6 (218-314)||(23610426-23610522)
chr6 (218-314)||(17201591-17201687)
chr6 (224-314)||(9828919-9829009)
chr6 (224-314)||(27315287-27315376)
chr6 (220-308)||(808468-808556)
chr6 (224-314)||(808829-808920)
chr6 (220-314)||(25067958-25068052)
chr6 (220-314)||(26832532-26832626)
chr6 (219-290)||(29201553-29201624)
chr6 (220-314)||(4100330-4100428)
chr6 (220-312)||(17199982-17200074)
chr6 (210-267)||(25068126-25068183)
chr6 (274-314)||(17202681-17202721)
chr6 (220-267)||(4125712-4125759)
chr6 (223-314)||(15130898-15130989)
chr6 (217-265)||(17201809-17201857)
chr6 (218-281)||(808687-808749)
chr6 (219-265)||(24223222-24223268)
[»] scaffold0294 (1 HSPs)
scaffold0294 (220-314)||(12401-12495)
[»] scaffold0018 (1 HSPs)
scaffold0018 (218-312)||(163820-163914)
[»] scaffold0320 (1 HSPs)
scaffold0320 (220-314)||(14596-14690)
[»] scaffold0240 (2 HSPs)
scaffold0240 (220-314)||(13088-13182)
scaffold0240 (258-314)||(13285-13341)
[»] scaffold0013 (1 HSPs)
scaffold0013 (217-314)||(102698-102793)
[»] scaffold0504 (1 HSPs)
scaffold0504 (223-312)||(1551-1641)
[»] scaffold1155 (1 HSPs)
scaffold1155 (210-314)||(960-1068)
[»] scaffold0345 (1 HSPs)
scaffold0345 (210-314)||(9149-9257)
[»] scaffold0105 (1 HSPs)
scaffold0105 (210-314)||(29723-29831)
[»] scaffold0432 (1 HSPs)
scaffold0432 (219-267)||(5372-5420)


Alignment Details
Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 41093189 - 41093085
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41093189 ttctacacttatccttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacc 41093090  T
Q  310 taaca 314  Q
    |||||    
T  41093089 taaca 41093085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 41093006 - 41092906
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  41093006 tacacttatccttatttattaattttgttaggtctgcatcaatttaacctaatttattcc-gctcttttgctttattaggtttgcaattatttaacctaa 41092908  T
Q  313 ca 314  Q
    ||    
T  41092907 ca 41092906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 43395072 - 43394969
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||| |||  || |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43395072 ttctacacttatccttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacc 43394974  T
Q  310 taaca 314  Q
    |||||    
T  43394973 taaca 43394969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 16528945 - 16529047
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  16528945 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaatt--ttcctgctcatttgccttattaggtttgcaattatttaacc 16529042  T
Q  310 taaca 314  Q
    |||||    
T  16529043 taaca 16529047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 26523375 - 26523271
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| |||    
T  26523375 ttctacatttatccttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacc 26523276  T
Q  310 taaca 314  Q
    |||||    
T  26523275 taaca 26523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 16529121 - 16529225
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||     
T  16529121 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacg 16529220  T
Q  310 taaca 314  Q
    |||||    
T  16529221 taaca 16529225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 35159690 - 35159793
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||| ||||||||||||||||||||||||  || |||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  35159690 ttctacatttatccttatttattaattttgttacgtctgcagcaatttaacctatttt-ttcccgctcatttgctttattaggtttgcaattatttaacc 35159788  T
Q  310 taaca 314  Q
    |||||    
T  35159789 taaca 35159793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 210 - 312
Target Start/End: Original strand, 11313965 - 11314068
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||| ||| || | |||||||||||||||||||||||||||||||||||    
T  11313965 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaac 11314064  T
Q  309 ctaa 312  Q
    ||||    
T  11314065 ctaa 11314068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 7127555 - 7127649
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  7127555 atccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaaca 7127649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 19121903 - 19121997
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||||||||||||||||||||||| ||||||||||||    
T  19121903 atccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaaca 19121997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 19122239 - 19122333
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||||||||||||||||||||||| ||||||||||||    
T  19122239 atccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaaca 19122333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 16528763 - 16528871
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgg----gtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 305  Q
    |||||||||||||||||||||||||||||||| |    || |||| |||||||||||||||| |||| |||||||||| ||||||||||||||| |||||    
T  16528763 ttctacacttatccttatttattaattttgtttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatattt 16528862  T
Q  306 aacctaaca 314  Q
    |||||||||    
T  16528863 aacctaaca 16528871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41100651 - 41100569
Alignment:
Q  1 ccagtcagtagagtagtttcctaacaataaaattaaataaatcaagaagtaaaaatatgttttatctctataaataatatttttta 86  Q
    ||||||||||||||||||| |||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||    
T  41100651 ccagtcagtagagtagtttgctaacaataaaattaaataaatc---aagttaaaatatgttttatctctataaataatatttttta 41100569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 12442258 - 12442168
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||| |||| ||| |||| |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  12442258 ttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaaca 12442168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 26523269 - 26523175
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||| | ||||||    
T  26523269 atccttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaaca 26523175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 24351583 - 24351487
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||| || ||| ||||  ||||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||    
T  24351583 ttatccttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaaca 24351487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 11313635 - 11313730
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||| ||  || | || |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  11313635 tatccttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaaca 11313730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 16526190 - 16526288
Alignment:
Q  217 cttatccttatttattaa-ttttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| |||||||  || ||||||||||||||||||||| ||    ||||||||||||||||||||||||||||||||||||||||    
T  16526190 cttatccttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaaca 16526288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 16528589 - 16528690
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||| |||| |||||||||||||||||||  || | || |||||||||||||  | |||| |||||||||||||||||||||||||||||||||||||||    
T  16528589 tacatttattcttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaa 16528688  T
Q  313 ca 314  Q
    ||    
T  16528689 ca 16528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 23138027 - 23138121
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| ||| ||| |||| || ||||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||    
T  23138027 tatccttatttattaatttcgttaggtctgcagcattttaacctaattttttcc-gctcatttgctttattaggtttgcaattatataacgtaaca 23138121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 9488179 - 9488085
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | | | |||||||||||||| ||||||||||||||||||||||    
T  9488179 atccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaaca 9488085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 11313807 - 11313892
Alignment:
Q  229 tattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||  || |||| |||||||||||||||| |||| || ||||| ||||||||||||||||||||||||||||||||    
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaaca 11313892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 7673330 - 7673234
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||| ||||||||||||||||||  || |||| |||||||||||||||| || || | ||||||| |||||||||||||||||||||||||||||||    
T  7673330 tatctttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaaca 7673234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 31487195 - 31487099
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||||| | |||| ||||||||||| ||||||||| ||| | |||||||||||||    
T  31487195 ttatccttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaaca 31487099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 313
Target Start/End: Original strand, 35159414 - 35159506
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 313  Q
    |||| ||||||||||||||||||  || |||| |||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||||    
T  35159414 tatctttatttattaattttgttacgt-tgcaacaatttaacctaattt-ttcccgttcttttgctttattaggtttgcaattatttaacctaac 35159506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 16305344 - 16305434
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||| ||| || |  ||||||| |||||||  ||| |||||||||||||||||||||||||||||||||| ||||    
T  16305344 atccttatttattaattttgttaggtttgtaataatttaaactaattt--tcccgctcatttgctttattaggtttgcaattatttaatctaa 16305434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 24326548 - 24326609
Alignment:
Q  247 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24326548 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 24350793 - 24350732
Alignment:
Q  247 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24350793 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 24351347 - 24351286
Alignment:
Q  247 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  24351347 tgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 24350995 - 24350934
Alignment:
Q  253 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||||    
T  24350995 aatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaaca 24350934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 13035310 - 13035227
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattta 306  Q
    ||||||||||||||||||  ||| |||| |||||||| ||||||| || | ||||||| | |||||||||||||||||||||||    
T  13035310 cttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattattta 13035227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 13105285 - 13105202
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattta 306  Q
    ||||||||||||||||||  ||| |||| || ||||||||||||| || | ||||||| | |||||||||||||||||||||||    
T  13105285 cttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattattta 13105202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 10409521 - 10409615
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || | ||  ||||||| ||||||| |||| |||||||| ||| | ||| ||||||||||||||||||||||    
T  10409521 atccttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaaca 10409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 26523547 - 26523451
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt---cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| |||||||| || |||||| |||||| ||     ||||||||||||||||||  |||||||||||||||| |||||    
T  26523547 tatccttatttattaattttgttaggtgtgcaccattttaacttaattttttttctttgctcatttgctttatta--tttgcaattatttaacataaca 26523451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 43395207 - 43395146
Alignment:
Q  253 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||| | |||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  43395207 aatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaaca 43395146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 14166289 - 14166198
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgc-tcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| ||| ||||  |||||||| |||||| ||  |   ||||||||||||||| |||||||||||||||||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaaca 14166198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 31486941 - 31486851
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| || ||| |||| |||||||||||||| | |||| | ||||||||| |||||||||  || | |||||||||||||    
T  31486941 ttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaaca 31486851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 7673156 - 7673102
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    |||| ||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  7673156 tacatttatccttatttattaattttgttacgtctgcagcaatttaacctaattt 7673102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 267
Target Start/End: Original strand, 38268880 - 38268923
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaattt 38268923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 14854324 - 14854373
Alignment:
Q  216 acttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 265  Q
    ||||||||||||||||||||||| || ||| |||| ||| ||||||||||    
T  14854324 acttatccttatttattaattttattaggtttgcagcaacttaacctaat 14854373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 22431580 - 22431633
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 272  Q
    |||||||||||||||||||||||  || |||| ||| |||||||||||| ||||    
T  22431580 tatccttatttattaattttgttaagtctgcagcaacttaacctaattttttcc 22431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 24049561 - 24049654
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 313  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  24049561 atccttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaac 24049654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 28379872 - 28379777
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  28379872 tatccttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 28379777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 47631528 - 47631628
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  47631528 tacacttattcttatttattaattttgtcaggtctgcatcaatttaacctaatttatt-ctgctcttttgctttattaggtttgcaattatttaacctaa 47631626  T
Q  313 ca 314  Q
    ||    
T  47631627 ca 47631628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 43161860 - 43161756
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||| |||||  || |||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  43161860 ttctacacttatccttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacc 43161761  T
Q  310 taaca 314  Q
    |||||    
T  43161760 taaca 43161756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 48076354 - 48076458
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||| |||||||||||||||  || |||| |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  48076354 ttctacacttatccttctttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacc 48076453  T
Q  310 taaca 314  Q
    |||||    
T  48076454 taaca 48076458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 47631359 - 47631450
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  47631359 cttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaaca 47631450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 48076183 - 48076280
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||||  || |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  48076183 cttatccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 48076280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 54653758 - 54653665
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  54653758 tccttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaaca 54653665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 22292893 - 22292988
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||| | ||| |||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  22292893 tatccttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 22292988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 28380082 - 28379988
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  28380082 tatccttatttattaattttgttaggtctgcaccaatttaacctaattt-ttcttgctcatttgttttattaggtttgcaattatttaacctaaca 28379988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 211 - 314
Target Start/End: Original strand, 36639332 - 36639435
Alignment:
Q  211 tctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacct 310  Q
    ||||||||||||||||| ||||||||||||| ||| |||| |||||||||||||||| |||| | |||||| |||||||||| |||||||||||||||||    
T  36639332 tctacacttatccttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacct 36639431  T
Q  311 aaca 314  Q
    ||||    
T  36639432 aaca 36639435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 44500667 - 44500762
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||    
T  44500667 tatccttgtttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaaca 44500762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 53144955 - 53144861
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  53144955 atccttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaaca 53144861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 36639169 - 36639262
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||  || || | |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  36639169 tccttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 36639262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 7796779 - 7796875
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||||||||||||||||||| ||| |||||||||||||||||    
T  7796779 ttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaaca 7796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 7821514 - 7821606
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaaccta 311  Q
    ||||||||||||||||||||||| ||| || | |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  7821514 tatccttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaaccta 7821606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 48076531 - 48076635
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||| ||||||||||||||||||||||||  || |||| |||||||||||||||| || | ||| |||||||||||||||||| |||||||||||||    
T  48076531 ttctacaattatccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacc 48076630  T
Q  310 taaca 314  Q
    |||||    
T  48076631 taaca 48076635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 8397853 - 8397758
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || |||||| |||| ||||||||||||||||||||||||| |||||    
T  8397853 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaaca 8397758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 221 - 312
Target Start/End: Complemental strand, 23952613 - 23952522
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||  || |||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  23952613 tccttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaa 23952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 47768947 - 47769042
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||| ||||||||||||||||||||||||||||    
T  47768947 tatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaaca 47769042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 52689730 - 52689634
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| ||||||||||||||| || ||| ||||| |||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  52689730 ttatctttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaaca 52689634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 7809348 - 7809436
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||| |||||||||||| ||| |||| ||||| |||||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaa 7809436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 222 - 314
Target Start/End: Original strand, 29967177 - 29967269
Alignment:
Q  222 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||||| |||| ||||||||| |||||||| ||||||||||| ||||||||||    
T  29967177 ccttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaaca 29967269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 23952887 - 23952796
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||| ||||||||||||||||||||||||| |||||    
T  23952887 cttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaaca 23952796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 28813220 - 28813314
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| | || |||||||| ||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||    
T  28813220 tatccttatttattaattttgttaggtttacaacaatttaatctaattttttcc-gctcatttgctttattaggtttgtaattatttaaccaaaca 28813314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 4941678 - 4941768
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||   | | ||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  4941678 ttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 4941768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 7821301 - 7821391
Alignment:
Q  222 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| |||| || ||||||||||||||   |||||||||||||||||||    
T  7821301 ccttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaa 7821391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 8118377 - 8118471
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||| |||  || |||| ||||||||| |||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  8118377 ttatccttatttattaattt-gttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaaca 8118471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 22292701 - 22292781
Alignment:
Q  234 attttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||| ||| ||||  ||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 22292781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 8118608 - 8118687
Alignment:
Q  235 ttttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||| ||| |||| |||||||||||||||| || | ||||||||||||||||||| |||||||||||||||||||||    
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaaca 8118687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 12796227 - 12796136
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||| || ||| || | |||||||||||||||| || | ||||||||| |||||||||||||||||||||||| ||||||    
T  12796227 cttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaaca 12796136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 21585663 - 21585572
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || |||| ||||||||| |||||| || |  |||||||||||||||||||||||||||||||||| |||||    
T  21585663 cttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaaca 21585572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 2177264 - 2177354
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||| |||| | | |||| ||||||||  |||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  2177264 ttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaaca 2177354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 28389877 - 28389787
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| ||| ||||  |||| | |||||| | |||| ||||||||||||||||||||||||| |||||||||||||||    
T  28389877 ttatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaaca 28389787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 24046058 - 24046123
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttg 282  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||    
T  24046058 cttatccttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 8079295 - 8079385
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| |||||   || ||  |||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||    
T  8079295 tccttatttattaattttgctgggt---caacagcttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaaca 8079385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 21581351 - 21581292
Alignment:
Q  255 tttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaaca 21581292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 15456285 - 15456363
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 295  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  15456285 cttatccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 15463669 - 15463747
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 295  Q
    ||||||||| ||||||||||||||| ||| |||| ||||||||||||||||  |||  |||||||||||||||||||||    
T  15463669 cttatccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 2481754 - 2481677
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatt 301  Q
    |||| |||||||||||||  || |||| ||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  2481754 ttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgcaatt 2481677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 7809561 - 7809620
Alignment:
Q  253 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||| || |||||||||||||||||||| |||| |||||||||||||||    
T  7809561 aatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaa 7809620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 32010789 - 32010701
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||  || ||||  ||||||| ||||||| || | |||||||| |||||||||||||| |||||||| ||||||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaa 32010701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 314
Target Start/End: Complemental strand, 43162003 - 43161941
Alignment:
Q  252 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||| ||| || |||  ||||||||||||||||||||||||||||||||||| |||||    
T  43162003 caatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaaca 43161941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 24049337 - 24049369
Alignment:
Q  278 atttgctttattaggtttgcaattatttaacct 310  Q
    |||||||||||||||||||||||||||||||||    
T  24049337 atttgctttattaggtttgcaattatttaacct 24049369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 241
Target Start/End: Complemental strand, 21585498 - 21585467
Alignment:
Q  210 ttctacacttatccttatttattaattttgtt 241  Q
    ||||||||||||||||||||||||||||||||    
T  21585498 ttctacacttatccttatttattaattttgtt 21585467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 2526940 - 2526989
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 272  Q
    ||||||||||||||||| | ||| |||| |||||||||||||||| ||||    
T  2526940 cttatttattaattttggtaggtctgcagcaatttaacctaattttttcc 2526989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 8479198 - 8479159
Alignment:
Q  274 gctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  8479198 gctcatttgctttattagatttgcaatta-ttaacctaaca 8479159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Complemental strand, 47428358 - 47428306
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 265  Q
    |||| |||||||||||||||||||||||| | | | || ||||||||||||||    
T  47428358 tacatttatccttatttattaattttgttagatctacaacaatttaacctaat 47428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 9142073 - 9141976
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9142073 cttatccttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaaca 9141976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 11650118 - 11650023
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  11650118 tatccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 11650023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 18486630 - 18486724
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  18486630 atccttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 18486724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 40450210 - 40450116
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  40450210 atccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaaca 40450116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 23591524 - 23591429
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| | | |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  23591524 tatccttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 23591429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 48640911 - 48640816
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  48640911 tatccttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaaca 48640816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 4681005 - 4680911
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  4681005 atccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 4680911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 27716642 - 27716546
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||| ||| | || ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  27716642 ttatccttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaaca 27716546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 210 - 309
Target Start/End: Complemental strand, 48641135 - 48641036
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||||||| ||| || | ||||||||| || ||| |||| ||||||||||||||||||||||||||||||||||||    
T  48641135 ttctacacttatccttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaacc 48641036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 9142242 - 9142148
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| ||||  ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  9142242 atccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaaca 9142148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 27716421 - 27716324
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||| ||| |  | |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  27716421 cttatccttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaaca 27716324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 11646042 - 11645946
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||  || |||| ||| |||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  11646042 ttatccttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaaca 11645946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 21224133 - 21224228
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||| |||||||||||||||||| ||||||||||||||||||    
T  21224133 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaaca 21224228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 2527059 - 2526969
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaac 313  Q
    |||||||||||||||||| ||| |||| |||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaac 2526969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 12140970 - 12140876
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||| ||||||||||||||||||||||||||||||    
T  12140970 atccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaaca 12140876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 11646509 - 11646412
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||||  || |||| ||| |||| ||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  11646509 cttatccttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 11646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 314
Target Start/End: Complemental strand, 45419743 - 45419651
Alignment:
Q  222 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||| ||| ||||  ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||    
T  45419743 ccttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaaca 45419651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 307
Target Start/End: Complemental strand, 2354778 - 2354687
Alignment:
Q  216 acttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaa 307  Q
    |||||| ||||||||||||||||||| ||| |||| ||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||    
T  2354778 acttattcttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaa 2354687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 16492653 - 16492560
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| ||||||||| || ||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  16492653 atccttatttattaattttgttaggtctgcagcaatttaacttatttttttcc-gctcatttgctttattatgtttgcaattatttaacctaaca 16492560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 16671605 - 16671695
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||| || |||||||| ||| |||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  16671605 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 16671695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 17645973 - 17646063
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||| || |||||||| ||| |||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  17645973 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 17646063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 11646620 - 11646705
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta 302  Q
    |||||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||||||||||||||    
T  11646620 cttatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 22774021 - 22773926
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||||||||| || |||||||||||||||| ||||||    
T  22774021 ttatccttatttattaattttgttacgtctgcaacaatttaacctaattt-ttcccgctcatttgctttactatgtttgcaattatttaatctaaca 22773926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 32278245 - 32278158
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaa 307  Q
    ||||||||||||||||| ||||  || |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  32278245 atccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 34837183 - 34837278
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||| ||| || | ||| |||||||||||||||||| ||||||||||||||||||    
T  34837183 atccttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaaca 34837278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 23591740 - 23591646
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||| |  ||||||| ||||| || ||||||| ||||   |||||||||||||||||||||||||||||||||||||||    
T  23591740 atccttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaaca 23591646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 35124721 - 35124815
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||| ||||| ||| |||| ||||||||| |||||| ||   | |||||||||||||||||||||||||||||||||||||||    
T  35124721 atccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaaca 35124815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 18487180 - 18487241
Alignment:
Q  253 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 18487241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 16671241 - 16671336
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaattt-aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||| ||| | |||| ||||||||||| |||||||||||||||||||||||||||||    
T  16671241 tatccttatttattaattttgttaggtctgcagcaattttaaccaaatattttcc-gctcatttgctctattaggtttgcaattatttaacctaaca 16671336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 17645609 - 17645704
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaattt-aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||| ||| | |||| ||||||||||| |||||||||||||||||||||||||||||    
T  17645609 tatccttatttattaattttgttaggtctgcagcaattttaaccaaatattttcc-gctcatttgctctattaggtttgcaattatttaacctaaca 17645704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 19222100 - 19222196
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| | | |||| |||||||||||||||| ||  | | |||||||||||||||||||| ||||||||||||||||||    
T  19222100 tatccttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaaca 19222196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 22324278 - 22324374
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||||  |||| |||||||| |||| ||||||||| ||||||| |||||||||    
T  22324278 ttatctttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaaca 22324374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 46264393 - 46264298
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| ||| | |||||||||| || ||  ||||||||||||||||||||||||||||||||||||||||    
T  46264393 atccttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaaca 46264298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 45419947 - 45419857
Alignment:
Q  225 tatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||| ||| ||||||||| ||||||| ||| ||  | ||||||||||||||||||||||| |||||||||||||||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaaca 45419857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 48641546 - 48641457
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| ||  || ||||  || |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattt-ttcctgctcatttgctttattaagtttgcaattatttaacctaaca 48641457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 4681227 - 4681162
Alignment:
Q  247 tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||    
T  4681227 tgcaacaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 4681162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 11646312 - 11646224
Alignment:
Q  226 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||  || |||| ||| |||||||||||| || |  |||||||||||| |||||||||||||||||||||||||||    
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaaca 11646224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 34837441 - 34837531
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||| |||||||| ||| | || ||||||||| |||||| |||| |||||||| ||||||||||||||||||||||| ||||||||    
T  34837441 cttatttatttattttgttaggtcttcagcaatttaacataattttttcc-gctcatttactttattaggtttgcaattattttacctaaca 34837531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 21128036 - 21128130
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| || ||||||||||| | || | ||| ||||||||||||| |||| || |||||||||||||||    
T  21128036 atccttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaaca 21128130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 30991452 - 30991550
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| ||||||| |  || |||| ||||||||| |||||| ||  | ||||||||||||||||| |||||||||||||||||||||||    
T  30991452 cttatccttatttatcaattttgatacgtttgcaacaatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaaca 30991550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 2853329 - 2853232
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||| |||||||||||||||   | || |||||||||||||||||| ||  | | ||||||| |||||||||||||||||||||||||||||||    
T  2853329 ttatccttgtttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaaca 2853232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 314
Target Start/End: Original strand, 43059223 - 43059281
Alignment:
Q  256 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||| ||||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaaca 43059281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 1566591 - 1566523
Alignment:
Q  247 tgcatcaatttaacctaatttattcct-gctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||| |||||||||||||||| ||  | || ||||||||||||||||||||||||||||||||||||||    
T  1566591 tgcaacaatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaaca 1566523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 23591309 - 23591238
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta 290  Q
    ||||||||||||| ||||||||| ||| | |  |||||||||||||||| |||| |||||||||||||||||    
T  23591309 tatccttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttatta 23591238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 4681700 - 4681613
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || |||| ||||||||| |||||| |||| | |   ||||||||||||||||||||||||||||| |||||    
T  4681700 cttatttattaattttgttacgtctgcagcaatttaacttaattt-ttcccgtt---ttgctttattaggtttgcaattatttaacttaaca 4681613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 4454918 - 4455014
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||| || ||| |||| ||| |||||||||| | ||||  |  ||||||| ||||||||| ||| | |||||||||||||    
T  4454918 ttatccttatttattaattttattaggtctgcaacaacttaacctaatattttccctccaatttgctgtattaggttagcagtaatttaacctaaca 4455014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 34837383 - 34837431
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  34837383 tatccttatttattaattttgttaggtctgcaacaatttaacctaattt 34837431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 40686943 - 40686907
Alignment:
Q  278 atttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||||||||||||||||    
T  40686943 atttgctttattaggtttgcaattatttaacctaaca 40686907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 16362788 - 16362705
Alignment:
Q  231 ttaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||| || ||| |||| |||| ||| ||||||| || | ||||||||| |||||||| |||||| |||||||||||||||    
T  16362788 ttaattttattaggtatgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaaca 16362705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 34837650 - 34837698
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    ||||||||||||||| ||||||| ||| |||| ||||||||||||||||    
T  34837650 tatccttatttattagttttgttaggtatgcagcaatttaacctaattt 34837698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 4455363 - 4455408
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaat 265  Q
    ||||||||||||||||||| || ||| |||| ||||||||||||||    
T  4455363 atccttatttattaattttattaggtctgcaacaatttaacctaat 4455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 38887476 - 38887381
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  38887476 tatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 38887381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 18094953 - 18095046
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  18094953 tccttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaaca 18095046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 11454548 - 11454653
Alignment:
Q  210 ttctacacttatccttatttattaatttt-gttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    ||||||||||||||||||||||||||||| |||  || |||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  11454548 ttctacacttatccttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaac 11454647  T
Q  309 ctaaca 314  Q
    ||||||    
T  11454648 ctaaca 11454653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 46451456 - 46451560
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||| ||||||||||||||||||||||||||  || ||||  ||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  46451456 ttctatacttatccttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacc 46451555  T
Q  310 taaca 314  Q
    |||||    
T  46451556 taaca 46451560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 18094737 - 18094831
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| ||||||||| |||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  18094737 atccttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaaca 18094831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 36643237 - 36643143
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  36643237 atccttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 36643143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 47503162 - 47503069
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  47503162 tccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaaca 47503069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 837314 - 837219
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||| ||  || |||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  837314 tatccttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 837219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 40050845 - 40050940
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||| |||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||    
T  40050845 tatccttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaaca 40050940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 43017266 - 43017361
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||| ||||||||||||||||  || |||| |||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  43017266 tatcctcatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaaca 43017361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 53047693 - 53047603
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||||||||||    
T  53047693 ttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaaca 53047603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 11454367 - 11454473
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgg---gtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattattta 306  Q
    |||||||||||||||||||||||||||||||||    || |||| ||||||| |||||||| ||| |||||||||||||||||||| |||||||||||||    
T  11454367 ttctacacttatccttatttattaattttgttgttacgtctgcagcaatttatcctaattttttc-tgctcatttgctttattaggcttgcaattattta 11454465  T
Q  307 acctaaca 314  Q
    ||||||||    
T  11454466 acctaaca 11454473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 11454201 - 11454295
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||| | ||||||| ||||||||||||||||||||||||    
T  11454201 atccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaaca 11454295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 37760501 - 37760587
Alignment:
Q  228 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||  || |||| ||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 37760587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 38887691 - 38887594
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcct--gctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||| ||||||||||||||| || ||| |||| |||||||||||||||| ||  |  |||||||||||||||||||||||||||||||||||||||||    
T  38887691 tatcattatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 38887594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 38887905 - 38887811
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| |  ||| ||||  ||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||    
T  38887905 atccttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaaca 38887811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  228 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 313  Q
    |||||||||||||| | | |||| |||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 11522527 - 11522622
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| | || |||||||||||||||| || | | ||||||| |||||||||||| ||||| ||||||||||||    
T  11522527 tatccttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaaca 11522622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 16015360 - 16015266
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||| ||||||| ||| | |   ||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||||||    
T  16015360 atccttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaaca 16015266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 45514530 - 45514437
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||||||||  || |||| |||||||| ||||||| |||| | |||||| |||||||| |||||||||||||||||||||    
T  45514530 ttatccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttatta-gtttgcaattatttaacctaa 45514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 313
Target Start/End: Original strand, 24365735 - 24365823
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 313  Q
    ||||||||||||||||||||||||  ||       ||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  24365735 ttatccttatttattaattttgttacgt-------aatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaac 24365823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 35560101 - 35560192
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt--cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||   | |||| |||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  35560101 ttatttattaattttgttacttctgcagcaatttaacctaattttttttcct-ctcatttgctttattaggtttgcaattatttaacctaaca 35560192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 47503339 - 47503242
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||| ||  || | |  |||||||||||| ||| || || |||||||||||||||||||||||||||||||||||||||||    
T  47503339 ttatccttatttattaattttattacgtctacgacaatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 47503242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 47519955 - 47520015
Alignment:
Q  253 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 313  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  47519955 aatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacctaac 47520015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 11453933 - 11454028
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcct-gctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || || |  ||||||| ||||||| || || | |||||||||||||||||||||||||||||||||||||||    
T  11453933 atccttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaaca 11454028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 51654074 - 51654134
Alignment:
Q  254 atttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaaca 51654134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 20877323 - 20877232
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || |||| |||||||| ||||||| ||||  ||||||| ||||||||||||||   |||||||||||||||    
T  20877323 cttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaaca 20877232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 43819330 - 43819416
Alignment:
Q  226 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||| ||| |||| |||||||||||||| | |||| ||||||||||| ||||| |||  || | |||||||||||    
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaagttaacactaatttaacctaa 43819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 46451238 - 46451295
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    ||||||||||||||||||||||||||||||||  || | || ||||||||||||||||    
T  46451238 ttctacacttatccttatttattaattttgttacgtctccaacaatttaacctaattt 46451295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 46451320 - 46451373
Alignment:
Q  261 ctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||| | || |||||||||||||||||| ||||||||||||||||||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaaca 46451373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 3847821 - 3847885
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgct 284  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||| | |||  |||||||||||    
T  3847821 atccttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgct 3847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 314
Target Start/End: Original strand, 54274787 - 54274822
Alignment:
Q  279 tttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||||||||||||||    
T  54274787 tttgctttattaggtttgcaattatttaacctaaca 54274822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 46451074 - 46451165
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||| |  || |||| ||||||||  |||||| || | |||||||| ||   ||| |||||||||||||||||||||||    
T  46451074 atccttatttattaattttgatacgtctgcaacaatttaaattaatttttttccgctcatttcct---ttaagtttgcaattatttaacctaaca 46451165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 850960 - 851015
Alignment:
Q  252 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaa 307  Q
    ||||||||| |||||| || | ||||||||  ||||||||||||||||||||||||    
T  850960 caatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaa 851015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 11220780 - 11220866
Alignment:
Q  227 tttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| ||| |||| |||||||||||||| || ||||  || ||||||| ||||||||| ||| | |||| ||||||||    
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc--cttatttgctgtattaggttagcagtaattttacctaaca 11220866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 21969118 - 21969023
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||| |||||||||||||| || |||  ||| |||||||| ||||||| || || |  ||||||| ||||||||| ||| | |||||||||||||    
T  21969118 ttatccgtatttattaattttattaggtcagcagcaatttaatctaatttttttct-ccaatttgctgtattaggttagcagtaatttaacctaaca 21969023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 21991554 - 21991459
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||| |||||||||||||| || |||  ||| |||||||| ||||||| || || |  ||||||| ||||||||| ||| | |||||||||||||    
T  21991554 ttatccgtatttattaattttattaggtcagcagcaatttaatctaatttttttct-ccaatttgctgtattaggttagcagtaatttaacctaaca 21991459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 28612344 - 28612249
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  28612344 tatccttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 28612249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 28611919 - 28611824
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  28611919 tatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaaca 28611824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 221 - 312
Target Start/End: Complemental strand, 10129606 - 10129515
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  10129606 tccttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaa 10129515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 28612128 - 28612039
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  28612128 cttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaa 28612039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 41995865 - 41995769
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| ||||||||||||||||||  || || | |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  41995865 ttatctttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaaca 41995769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 44543835 - 44543733
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||||||| ||||||||||||||||||||  ||  ||| |||||||||||||||| | || |||||||||||||||| |||||||||||||||||||    
T  44543835 ttctacacttaaccttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacc 44543736  T
Q  310 taa 312  Q
    |||    
T  44543735 taa 44543733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 11735903 - 11735999
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||| | |||| |||||||||||| || |||||||||||||||||||||||||    
T  11735903 cttatccttatttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaaca 11735999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 627531 - 627627
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||| ||||||||  ||||||||||||||||||||||    
T  627531 ttatccttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaaca 627627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 29550119 - 29550227
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttat----taggtttgcaattattt 305  Q
    ||||||| ||||||||||||||||||||| || ||| |||| |||||||||||||||| || | |||||||||||||||    |||||||||||||||||    
T  29550119 ttctacatttatccttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattattt 29550218  T
Q  306 aacctaaca 314  Q
    |||||||||    
T  29550219 aacctaaca 29550227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 28612556 - 28612464
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||||||| ||  |||| |||||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||    
T  28612556 tatccttatttattaattttgttaggc-tgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaa 28612464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 312
Target Start/End: Original strand, 44256468 - 44256561
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||| |||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||| ||||||||||||| ||| ||||||||||||    
T  44256468 tatctttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaa 44256561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 29549944 - 29550048
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||| ||||||| |||||||||||||||| ||| ||||  ||||||||||||||| |||  | |||||||||||||||||||||  |||||||||||    
T  29549944 ttctacatttatcctcatttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacc 29550043  T
Q  310 taaca 314  Q
    |||||    
T  29550044 taaca 29550048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 5001638 - 5001539
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||| ||||||| |||  | |||||||||||||||||||  || |||||||||||||    
T  5001638 tacacttatccttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaa 5001539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 5001778 - 5001715
Alignment:
Q  251 tcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  5001778 tcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 5001715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 28612766 - 28612673
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||  |||| |||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||    
T  28612766 tatccttatttattaattttgttaggc-tgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaaca 28612673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 6348066 - 6348155
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaa 307  Q
    ||||||||||||||||||||||||  || |||| ||||||||| |||||| |||  ||||| ||||||||||||||||||||||||||||    
T  6348066 ttatccttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaa 6348155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 5013301 - 5013219
Alignment:
Q  225 tatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaa 307  Q
    |||||||||||||||||  || |||| ||||||||||||| || |||| |||||||||||||||||||||| |||||||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaa 5013219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 37131597 - 37131504
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| | | |||| |||||||||||||||| || |  |||||||||||||||| ||||||||||||||||| |||||    
T  37131597 atccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaaca 37131504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 41326372 - 41326457
Alignment:
Q  227 tttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||| ||| |||| ||||||||| |||||| | || ||||||||| ||||||| |||||||||||||||||||||    
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaa 41326457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 3249693 - 3249598
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||| | |||| ||||||||||| |||||||||  || | |||||||||||||    
T  3249693 tatccttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatattaggttaacagtaatttaacctaaca 3249598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 28612979 - 28612884
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattagg-tttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||  | ||||||| ||||||||| ||| ||||||||||| ||||||    
T  28612979 atccttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaaca 28612884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 12898019 - 12898113
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| | | |||| ||||||||||| || | || | |||||||| |||| |||||||||||||||||||| ||||||    
T  12898019 atccttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaaca 12898113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 312
Target Start/End: Complemental strand, 44544037 - 44543944
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||||  ||  ||| ||||||||| |||||| ||||  ||||||||| |||||| ||||| |||||||||||||||    
T  44544037 tatccttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaa 44543944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 3249909 - 3249815
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| | | |||| |||||||||||||| | || | ||| ||||||| ||||||||| ||| | |||||||||||||    
T  3249909 atccttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaaca 3249815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 11736329 - 11736391
Alignment:
Q  252 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||| | |||| |||||||||||| || |||||||||||||||||||||||||    
T  11736329 caatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaaca 11736391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 29549785 - 29549879
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||| ||||||||| ||||||||| ||| | || | ||||||| || ||| || | |||||||||||||||||||||| ||||||||||||||||    
T  29549785 ttattcttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaa 29549879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 12896533 - 12896444
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||  || | || ||||||||| |||| | || | ||||||||| |||||||||||||||||||||||| ||||    
T  12896533 cttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaa 12896444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 295
Target Start/End: Complemental strand, 2132310 - 2132238
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 295  Q
    |||||||||||| |||||| ||| |||| |||||||||||||||| |  ||||||||||||||| ||||||||    
T  2132310 cttatttattaagtttgttaggtctgcaacaatttaacctaatttttctctgctcatttgcttttttaggttt 2132238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 5001430 - 5001392
Alignment:
Q  274 gctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5001430 gctcatttgctttattaggtttgcaattatttaacctaa 5001392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 312
Target Start/End: Complemental strand, 5013100 - 5013062
Alignment:
Q  274 gctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5013100 gctcatttgctttattaggtttgcaattatttaacctaa 5013062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 44543623 - 44543574
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaa 259  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  44543623 ttctacacttatccttatttattaattttgttaggtctgcagcaatttaa 44543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 5001313 - 5001268
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaat 255  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||    
T  5001313 ttctacacttatccttatttattaattttgttaggtctgcagcaat 5001268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 5012983 - 5012938
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaat 255  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||||    
T  5012983 ttctacacttatccttatttattaattttgttaggtctgcagcaat 5012938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 627629 - 627666
Alignment:
Q  277 catttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  627629 catttactttattacgtttgcaattatttaacctaaca 627666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 6347938 - 6347982
Alignment:
Q  269 ttcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||||    
T  6347938 ttcccgctcatttgctttatta-gtttacaattatttaacctaaca 6347982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 5001464 - 5001436
Alignment:
Q  210 ttctacacttatccttatttattaatttt 238  Q
    |||||||||||||||||||||||||||||    
T  5001464 ttctacacttatccttatttattaatttt 5001436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 238
Target Start/End: Complemental strand, 5013134 - 5013106
Alignment:
Q  210 ttctacacttatccttatttattaatttt 238  Q
    |||||||||||||||||||||||||||||    
T  5013134 ttctacacttatccttatttattaatttt 5013106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 23831055 - 23830961
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  23831055 atccttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 23830961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 13797437 - 13797532
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  13797437 tatccttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaaca 13797532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 23828234 - 23828143
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  23828234 cttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 23828143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 1197873 - 1197968
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||    
T  1197873 tatccttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaaca 1197968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 23085860 - 23085948
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  23085860 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaa 23085948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 29580145 - 29580054
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| ||||||    
T  29580145 cttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaaca 29580054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 3459246 - 3459151
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||| ||||||||||  || |||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  3459246 tatccttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaaca 3459151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 23838449 - 23838358
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacct-aatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  23838449 ttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaaca 23838358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 37410182 - 37410088
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| ||  || |||| ||||||||| |||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  37410182 atccttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 37410088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 23960694 - 23960598
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||||  || |||| ||||||||| |||||| || ||||||| |||||||||||||||| ||||||||||||||||||    
T  23960694 cttatccttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctca-ttgctttattaggtttacaattatttaacctaaca 23960598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 32062811 - 32062907
Alignment:
Q  220 atccttatttattaattttgttgggtg--tgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  ||   |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  32062811 atccttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 32062907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 37198410 - 37198314
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||| ||||| ||||| ||||||||||||    
T  37198410 ttatccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaaca 37198314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 227 - 314
Target Start/End: Complemental strand, 27853773 - 27853686
Alignment:
Q  227 tttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||  || || | |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaaca 27853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 30439155 - 30439058
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc---ctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||| ||||||| ||    ||| |||||||||||||||||||||||||||||||||||||||    
T  30439155 atccttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaaca 30439058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 23838246 - 23838173
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggt 293  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||    
T  23838246 atccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggt 23838173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 35617680 - 35617772
Alignment:
Q  223 cttatttattaattttgttgggtgtgcat-caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || ||||  ||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  35617680 cttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaaca 35617772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 37198227 - 37198131
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattc-ctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||| |||||| |||||||||||  || |||| |||||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  37198227 cttatcgttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaa 37198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 39922192 - 39922104
Alignment:
Q  226 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||| ||||||  || |||| ||||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaaca 39922104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 23960910 - 23960816
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||| ||||||| ||||||||||  || |||| |||||||||||||||| ||||  |||||||||||||||||||||| |||||||||||||||||    
T  23960910 tatctttatttaataattttgttacgtctgcagcaatttaacctaattttttcca-ctcatttgctttattaggtttgtaattatttaacctaaca 23960816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 38111372 - 38111434
Alignment:
Q  252 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||    
T  38111372 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaaca 38111434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 40399604 - 40399510
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||| |||||||||| ||  || || | |||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||    
T  40399604 atccttatgtattaatttttttatgtatgtagcaatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaaca 40399510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 37198032 - 37197922
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgc--------tttattaggtttgcaatt 301  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||| |||||||| |        ||||||||||||||||||    
T  37198032 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt-ttcc-gctcattttctttattaatttattaggtttgcaatt 37197935  T
Q  302 atttaacctaaca 314  Q
    |||||||||||||    
T  37197934 atttaacctaaca 37197922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 34947504 - 34947566
Alignment:
Q  252 caatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||||    
T  34947504 caatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaaca 34947566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 39922030 - 39921960
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatt 280  Q
    |||| |||||||||||||||||||||||||||  || |||| |||||||||||||||| ||||||||||||    
T  39922030 ttcttcacttatccttatttattaattttgttacgtctgcaacaatttaacctaattttttcctgctcatt 39921960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 44429047 - 44429140
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||| ||| | || ||| |||||||||| | ||||  |||||||||||||||||||  ||||| |||||||||||||    
T  44429047 tccttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaaca 44429140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 44429210 - 44429314
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||| |||||||||| || ||||| |||||||||||||||||||  ||| | |||||||    
T  44429210 ttctacatttatccttatttattaattttgttaggtctgcaacaacttaacctaatatttttcct-ctcatttgctttattaggtaagcagtaatttaac 44429308  T
Q  309 ctaaca 314  Q
    | ||||    
T  44429309 ccaaca 44429314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 33198827 - 33198923
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||| | || | ||||||||||| |||||||||  || | |||||||||||||    
T  33198827 ttatcattatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaaca 33198923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 44430053 - 44430157
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| ||||| |||| | ||||  | |||||||||||||||||  ||| | ||||||||    
T  44430053 ttctacacttatccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacc 44430152  T
Q  310 taaca 314  Q
     ||||    
T  44430153 caaca 44430157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 44433788 - 44433892
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| ||||| |||| | ||||  | |||||||||||||||||  ||| | ||||||||    
T  44433788 ttctacacttatccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacc 44433887  T
Q  310 taaca 314  Q
     ||||    
T  44433888 caaca 44433892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 18308319 - 18308261
Alignment:
Q  256 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||    
T  18308319 ttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaaca 18308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 37197848 - 37197791
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    ||||||||||||||||||||||||||||||||  || |||| ||||||||||||||||    
T  37197848 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattt 37197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 604795 - 604692
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| |||| | ||| | | ||| || ||||||||||||||||  ||| | ||||||||    
T  604795 ttctacacttatccttatttattaattttgttaggtctgcagcaacttaatcgaatatttccctcct-atttgctttattaggtaagcagtaatttaacc 604697  T
Q  310 taaca 314  Q
    |||||    
T  604696 taaca 604692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 37426110 - 37426206
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| ||||||||||||||||||  || |||| ||| |||  ||||||| || | |||||||| ||||||||||||||||||| |||||| |||||    
T  37426110 ttatctttatttattaattttgttacgtttgcagcaagttagtctaatttttttcagctcatttactttattaggtttgcaattgtttaacataaca 37426206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 43419136 - 43419046
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||   | |||||||| |||| ||||||| |||| ||||||||||||||||||||||   | ||||||||||||||    
T  43419136 atccttatttattaattttgttacatctgcatcaacttaatctaattt-ttcccgctcatttgctttattaggttt---actatttaacctaaca 43419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 44430404 - 44430508
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||||||| | | |||| ||| |||||||| | | ||||  |||||||||||||| ||||  ||| | ||||||||    
T  44430404 ttctacacttatccttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttatcaggtaagcagtaatttaacc 44430503  T
Q  310 taaca 314  Q
     ||||    
T  44430504 caaca 44430508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 44433962 - 44434066
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||| |||||||||||||||||||||||| ||| |||| ||| ||||||||||   ||||  | |||||||||||||||||  ||| | ||||||||    
T  44433962 ttctacatttatccttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttattaggtaagcagtaatttaacc 44434061  T
Q  310 taaca 314  Q
     ||||    
T  44434062 caaca 44434066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 44434139 - 44434223
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtt 294  Q
    |||||||||||||||||||||||||||||||| | | |||| ||| |||||||||| | ||||  |||||||| | |||||||||    
T  44434139 ttctacacttatccttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttgttgtattaggtt 44434223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 2084871 - 2084966
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| |||| ||| |||| ||||| | ||||  |||||||||| ||||||||| | | | |||||||||||||    
T  2084871 tatccttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtattaggttagtagtaatttaacctaaca 2084966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 33198599 - 33198691
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| |||  |||  ||||||||||||||| ||  | |||||||||| ||||||||| ||| | |||||||||||||    
T  33198599 atccttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaaca 33198691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 37197783 - 37197695
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||   | |||| |||||||||||||||  ||||||||||||||||||||||  | |  |||||||||||||||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaatt--ttcctgctcatttgctttattaaatataaaattatttaacctaaca 37197695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 44430227 - 44430331
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaat-ttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    |||||||||||| ||||||||||||||||||| ||| |||| ||| |||||||||| || ||||| | ||||| |||||||||||  ||| | |||||||    
T  44430227 ttctacacttattcttatttattaattttgttaggtctgcaacaacttaacctaatatttttcct-cccatttactttattaggtaagcagtaatttaac 44430325  T
Q  309 ctaaca 314  Q
    | ||||    
T  44430326 ccaaca 44430331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 314
Target Start/End: Complemental strand, 1276574 - 1276539
Alignment:
Q  279 tttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||||||||||||||    
T  1276574 tttgctttattaggtttgcaattatttaacctaaca 1276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 604623 - 604518
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctc-atttgctttattaggtttgcaattatttaac 308  Q
    |||||||||||||||| ||||||||||||||| | | || | ||| |||||||||| | ||||  ||| ||||||| ||||||||| ||| | |||||||    
T  604623 ttctacacttatccttgtttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaac 604524  T
Q  309 ctaaca 314  Q
     |||||    
T  604523 ataaca 604518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 42045633 - 42045727
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattagg--tttgcaattatttaacctaaca 314  Q
    |||||||||||| |||||||||  || |||| |||||||||||||||| ||  ||||||||| |||| ||| |  ||||||||||||||||||||||    
T  42045633 atccttatttat-aattttgttacgtctgcagcaatttaacctaattttttt-tgctcatttactttgttaagagtttgcaattatttaacctaaca 42045727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 604448 - 604344
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctc-atttgctttattaggtttgcaattatttaac 308  Q
    |||||||||||||||||||||||||||||||| | | || | ||| |||||||||| | ||||  ||| ||||| | |||||||||  || | |||||||    
T  604448 ttctacacttatccttatttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgttgtattaggttaacagtaatttaac 604349  T
Q  309 ctaac 313  Q
    |||||    
T  604348 ctaac 604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 34345140 - 34345192
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 272  Q
    ||||||||||||||||||| || ||| |||| |||||||||||||||| ||||    
T  34345140 atccttatttattaattttattaggtctgcagcaatttaacctaattttttcc 34345192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 44429383 - 44429485
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||||||||||||||||||||||||| || |   |||| ||| |||||||||| | ||||  ||| |||| | ||||||||| || || ||||||||    
T  44429383 ttctacacttatccttatttattaatttttttagaaatgcagcaacttaacctaatattttccctctcgtttgttgtattaggttagc-ataatttaacc 44429481  T
Q  310 taac 313  Q
    ||||    
T  44429482 taac 44429485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 39922277 - 39922229
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    |||||||||||||||||||||||  || | || ||||||||||||||||    
T  39922277 tatccttatttattaattttgttacgtcttcagcaatttaacctaattt 39922229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 44433623 - 44433719
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||| ||||||||| ||| |||| ||| || || |||| | ||||  | |||||||| ||||| ||| ||| | |||||||||||||    
T  44433623 ttatccttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtattatgttagcagtaatttaacctaaca 44433719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 42492278 - 42492181
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  42492278 cttatccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaaca 42492181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 5428522 - 5428618
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  5428522 ttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 5428618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 42497411 - 42497307
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||||| |||||||||||||||||||| | ||| |||| |||||||||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  42497411 ttctacactaatccttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacc 42497312  T
Q  310 taaca 314  Q
    |||||    
T  42497311 taaca 42497307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 51113892 - 51113996
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||    
T  51113892 ttctacacttatccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacc 51113991  T
Q  310 taaca 314  Q
    |||||    
T  51113992 taaca 51113996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 51114076 - 51114180
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||| ||||||||||||||||||||||||  || || | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  51114076 ttctacatttatccttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacc 51114175  T
Q  310 taaca 314  Q
    |||||    
T  51114176 taaca 51114180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 27296326 - 27296427
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||||||||||  || |||| |||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||    
T  27296326 tacacttatccttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaa 27296425  T
Q  313 ca 314  Q
    ||    
T  27296426 ca 27296427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 44263303 - 44263400
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||    
T  44263303 cttatccttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaaca 44263400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 42497053 - 42496949
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||| |||| ||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  42497053 ttctacaattatgcttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacc 42496954  T
Q  310 taaca 314  Q
    |||||    
T  42496953 taaca 42496949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 3227333 - 3227239
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  3227333 tatccttatttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaaca 3227239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 16165797 - 16165702
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||| ||| || | |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  16165797 tatccttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaaca 16165702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 21617756 - 21617846
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| |||||||||||| ||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  21617756 ttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 21617846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 38684011 - 38684105
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||    
T  38684011 atccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaaca 38684105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 51272600 - 51272510
Alignment:
Q  222 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||| ||| | || |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  51272600 ccttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaa 51272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 1647537 - 1647633
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||| ||| |||| || |||||||||| || || ||||||||||||||||||||||||| |||||||||||||||||    
T  1647537 ttatccttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaaca 1647633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 5428919 - 5429023
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    |||||||||||||||||||||||||||||||| | | |||| |||||||| ||||||| || | |||||| ||||||||||||||||||||||||||| |    
T  5428919 ttctacacttatccttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagc 5429018  T
Q  310 taaca 314  Q
    |||||    
T  5429019 taaca 5429023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 28950107 - 28950016
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatt 301  Q
    ||||||||||||||||||||||||||||||||  || |||| |||||||||||||||| || | ||||||||||||||||||||||||||||    
T  28950107 ttctacacttatccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 44263088 - 44263179
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || |||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  44263088 cttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaaca 44263179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 318551 - 318645
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||| ||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  318551 atccttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 318645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 51113719 - 51113813
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||    
T  51113719 atccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaaca 51113813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 52740696 - 52740790
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| || | |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||| |||||    
T  52740696 atccttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaaca 52740790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 1156174 - 1156081
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| |||||  |  |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  1156174 tccttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 1156081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 5429044 - 5429142
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt----cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||||    || ||||| |||||||||||||||||||||||||||||||||||    
T  5429044 atccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaaca 5429142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 27296158 - 27296250
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||||||  || |||| |||||||||||||||| | || ||| |||||||||||||||||||||||||||||||||||    
T  27296158 atccttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaa 27296250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 221 - 312
Target Start/End: Complemental strand, 28950368 - 28950277
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||  || | || |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  28950368 tccttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 44262659 - 44262754
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||| |||||||||||||||||| ||| |||| |||||||||||||||| || |  |||||||||||||||| |||||||||||||||||||||||    
T  44262659 tatctttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaaca 44262754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 6537757 - 6537671
Alignment:
Q  228 ttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||| |||  ||| ||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaaca 6537671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 24595224 - 24595316
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||||||||||  |       ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24595224 tacacttatccttatttattaattttgttatg-------caatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacctaa 24595316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 42497231 - 42497133
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    |||||||||| ||||||||||||||||||||| | | | || |||||||||||||||| |||   | ||||||||||||||||||| ||||||||||||    
T  42497231 ttctacacttctccttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaac 42497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 33375627 - 33375720
Alignment:
Q  221 tccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||  || |  | |||||||||||||||| |  | |||||||| ||||||||||||||||||||||||||||||||    
T  33375627 tccttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaaca 33375720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 4100691 - 4100601
Alignment:
Q  225 tatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||| ||| ||||  ||||||||||||||| || || ||||||||| ||||||| ||||||||||||||||| |||||    
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaaca 4100601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 6537541 - 6537465
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggttt 295  Q
    ||||||||||||||||||||||| ||| || | ||||||||| |||||| ||||  |||||||||||||||||||||    
T  6537541 tatccttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 18912326 - 18912418
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttg-caattatttaacctaaca 314  Q
    |||||||||||||||||||  || |||| |||||||||||||||| || | || ||||||||||||||||||||  ||||||||||| |||||    
T  18912326 cttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaaca 18912418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 28949995 - 28949908
Alignment:
Q  226 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||  || || | | |||||||||||||| |||| || |||||||||||||||||||| |||||||||||||||||    
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattt-ttcccgcacatttgctttattaggtttgtaattatttaacctaaca 28949908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 30083973 - 30084064
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt-attcctgctcatttgctttattaggtttgcaattatttaacc 309  Q
    ||||||||||||||||||||||| |||  ||| |||||||| |||||||  || | ||| ||||||||||||||||||| ||||||||||||    
T  30083973 tatccttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaacc 30084064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 44099747 - 44099688
Alignment:
Q  253 aatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||    
T  44099747 aatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaa 44099688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 4100890 - 4100810
Alignment:
Q  232 taattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||| ||| |||| |||||||| ||||||| || | ||||||| | |||||||| ||||||||||||||||||||    
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaa 4100810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 28950274 - 28950186
Alignment:
Q  226 atttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||  ||  ||| ||||||||| |||||| || | || ||||||||||||||| |||| |||||||||||||||||    
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaaca 28950186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 18912215 - 18912306
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttg-caattatttaacctaaca 314  Q
    ||||||||||||||||||  || |||| |||||||| ||||||| || | |||||||| ||||||||||||||  ||||||||||| |||||    
T  18912215 ttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaaca 18912306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 42497575 - 42497484
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| ||| ||||  |||||||| |||||| ||   ||||||||  ||||||||||||| ||||||||||| |||||    
T  42497575 cttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaaca 42497484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Complemental strand, 45417655 - 45417616
Alignment:
Q  275 ctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaaca 45417616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 314
Target Start/End: Original strand, 52584966 - 52585024
Alignment:
Q  256 ttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||| ||||  || ||||||||||||| ||||| |||||||||||||||||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaaca 52585024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 42492349 - 42492280
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcat 279  Q
    |||| |||||||||||||||||||||||||||  || | || |||||||||||| ||| |||| ||||||    
T  42492349 ttctgcacttatccttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 12115359 - 12115395
Alignment:
Q  278 atttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||| |||||||||||||||||    
T  12115359 atttgctttattaggtttggaattatttaacctaaca 12115395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 47790692 - 47790736
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaa 264  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||    
T  47790692 atccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 24595086 - 24595150
Alignment:
Q  252 caatttaacctaatttattcctgctcatttgctttattaggtttgcaat--tatttaacctaaca 314  Q
    |||||||||||||||| |||  ||| | || ||||||||||||||||||  ||||||||||||||    
T  24595086 caatttaacctaattttttctcgcttacttactttattaggtttgcaattatatttaacctaaca 24595150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 52740914 - 52740955
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaa 264  Q
    ||||||||||||||||||| ||| |||| |||||||||||||    
T  52740914 cttatttattaattttgttaggtctgcaacaatttaacctaa 52740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 43761941 - 43762037
Alignment:
Q  219 tatccttatttattaa-ttttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||| ||||||| ||| | || |||||||||||||| | |||| | ||||||  | ||||||||| ||| | |||||| ||||||    
T  43761941 tatccttatttattaatttttgttaggtttacaacaatttaacctaatattttccggttcattttgtgtattaggttagcagtaatttaatctaaca 43762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 48553045 - 48552993
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcc 272  Q
    ||||||||||||||||||||||  || |||| ||| |||||||||||| ||||    
T  48553045 atccttatttattaattttgttaagtttgcagcaacttaacctaattttttcc 48552993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 17906910 - 17906816
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  17906910 atccttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaaca 17906816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 27579594 - 27579688
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  27579594 atccttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaaca 27579688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 23622207 - 23622308
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    ||||||||||||||||||||||||||||| ||| ||||  |||||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||    
T  23622207 tacacttatccttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaa 23622306  T
Q  313 ca 314  Q
    ||    
T  23622307 ca 23622308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 17202843 - 17202940
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| ||||||||| ||| |||| |||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||||    
T  17202843 cttatccttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaaca 17202940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 222 - 314
Target Start/End: Original strand, 25068186 - 25068278
Alignment:
Q  222 ccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||  || |||| |||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  25068186 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaaca 25068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 32208524 - 32208423
Alignment:
Q  213 tacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaatta-tttaaccta 311  Q
    ||||||||||||||||||||||||||| | ||| |||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  32208524 tacacttatccttatttattaattttgctaggtctgcaacaatttaatctaattttttcc-gctcatttgctttattaggtttgcaattattttaaccta 32208426  T
Q  312 aca 314  Q
    |||    
T  32208425 aca 32208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 4811172 - 4811079
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaac 313  Q
    ||||||||||||| ||||||||  || |||| |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  4811172 atccttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaac 4811079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 23610426 - 23610522
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  23610426 ttatccttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaaca 23610522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 17201591 - 17201687
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||||  || |||| ||||||||||||| || || | ||||||||| |||||||||||||||||||||||||||||||    
T  17201591 ttatccttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaaca 17201687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 9828919 - 9829009
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||| ||||||||||||   | |||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  9828919 ttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaaca 9829009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 27315287 - 27315376
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| ||| |||| ||| |||||||||||| ||||  || |||||||||||||||||||||||||||||||||||||    
T  27315287 ttatttattaattttgttcggtctgcagcaacttaacctaattttttcca-ctaatttgctttattaggtttgcaattatttaacctaaca 27315376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 308
Target Start/End: Original strand, 808468 - 808556
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaac 308  Q
    |||||||||||||||||||||| | | |||| ||||||||| |||||| |||  |||||||||||||||||| ||||||||||||||||    
T  808468 atccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaac 808556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 808829 - 808920
Alignment:
Q  224 ttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||| ||||||||||||| ||| |||| |||||||||||||||| || ||  ||||||||||||||||||||||||||||||||||| ||||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaaca 808920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 25067958 - 25068052
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||| |||||||||||   | |||| |||||||||||||||| || | ||||||||||||||| ||||||||||||||||||| |||||    
T  25067958 atccttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataaca 25068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 26832626 - 26832532
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttatt-cctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||| |||||| | | |||| |||||||||||||||| || || ||| ||||||||||||||||||||||||||||||| |||||    
T  26832626 atccttatttattaactttgttagat-tgcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaaca 26832532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 29201553 - 29201624
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttatta 290  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||| || | |||||||||||||||||    
T  29201553 tatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttatta 29201624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 4100428 - 4100330
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctc----atttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | | ||    ||||||||||||| |||||||||||||||| ||||||    
T  4100428 atccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaaca 4100330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 312
Target Start/End: Original strand, 17199982 - 17200074
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||| ||| || | |||||||||||||| | ||||  |||||||||| |||||||||  || | |||||||||||    
T  17199982 atccttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatattaggttaacagtaatttaacctaa 17200074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 25068126 - 25068183
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    ||||||||||||||||||||||||||||||||  ||||||| | ||||||| ||||||    
T  25068126 ttctacacttatccttatttattaattttgttacgtgtgcagctatttaacataattt 25068183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 17202681 - 17202721
Alignment:
Q  274 gctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  17202681 gctcatttgctttattaggtttgcaattatttaatctaaca 17202721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 4125759 - 4125712
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  4125759 atccttatttattaattttgttaggtctgcagcaatttaacctaattt 4125712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 15130898 - 15130989
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||  || |||| ||| ||||| ||| |  || |  |||||| |||||||||| ||||||||||||||||||||||    
T  15130898 cttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaaca 15130989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 17201809 - 17201857
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaat 265  Q
    ||||||||||||||| ||||||||| ||| |||| ||||||||||||||    
T  17201809 cttatccttatttataaattttgttaggtatgcagcaatttaacctaat 17201857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 808687 - 808749
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcattt 281  Q
    ||||||||||||||||||||||||  || |||  |||||||||||||||| |||| ||||||||    
T  808687 ttatccttatttattaattttgttatgtctgctgcaatttaacctaattt-ttcccgctcattt 808749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 24223268 - 24223222
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaat 265  Q
    |||||||||||||||||||| || ||| |||||||| ||||||||||    
T  24223268 tatccttatttattaattttatttggtctgcatcaacttaacctaat 24223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 12495 - 12401
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||    
T  12495 atccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaaca 12401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 163914 - 163820
Alignment:
Q  218 ttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||    
T  163914 ttatccttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaa 163820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 14690 - 14596
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    ||||||||||||||||||||||   | |||||||||||||| ||||||||||  ||||||||| |||||||| ||||||||||||||||||||||    
T  14690 atccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaaca 14596  T

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Target: scaffold0240 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 13088 - 13182
Alignment:
Q  220 atccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||||||| || | ||||||||| |||||||||||||| ||||||||||||||||    
T  13088 atccttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaaca 13182  T

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Target: scaffold0240; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 13285 - 13341
Alignment:
Q  258 aacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||||||| ||||  |||||||||||||||||| |||||||||||||||||||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaaca 13341  T

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Target: scaffold0013 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 102698 - 102793
Alignment:
Q  217 cttatccttatttattaattttgttgggtgtgcatcaatttaacctaatttattcctgctcatttgctttattaggtttgcaattatttaacctaaca 314  Q
    |||||| |||||||||||||||||| | | ||||  ||||  ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  102698 cttatctttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaaca 102793  T

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Target: scaffold0504 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 1641 - 1551
Alignment:
Q  223 cttatttattaattttgttgggtgtgcatcaatttaacctaa-tttattcctgctcatttgctttattaggtttgcaattatttaacctaa 312  Q
    |||||||||||||||||||  || |||| |||||||| |||| ||| ||||  |||||||||||||||| |||||||||||||||||||||    
T  1641 cttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaa 1551  T

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Target: scaffold1155 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 1068 - 960
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 305  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  1068 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 969  T
Q  306 aacctaaca 314  Q
    |||||||||    
T  968 aacctaaca 960  T

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Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 9149 - 9257
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 305  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  9149 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 9248  T
Q  306 aacctaaca 314  Q
    |||||||||    
T  9249 aacctaaca 9257  T

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Target: scaffold0105 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 29831 - 29723
Alignment:
Q  210 ttctacacttatccttatttattaattttgttgggtgtgcatca----atttaacctaatttattcctgctcatttgctttattaggtttgcaattattt 305  Q
    |||||||||||||||||||||||||||||||||||   | | ||    | |||||||||| | ||||  ||||||||||||||||||||  || | ||||    
T  29831 ttctacacttatccttatttattaattttgttgggcccgtaacaacttaattaacctaatattttccctctcatttgctttattaggttatcactaattt 29732  T
Q  306 aacctaaca 314  Q
    |||||||||    
T  29731 aacctaaca 29723  T

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Target: scaffold0432 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 5420 - 5372
Alignment:
Q  219 tatccttatttattaattttgttgggtgtgcatcaatttaacctaattt 267  Q
    |||||||||||||||||||| || ||| |||| ||| ||||||||||||    
T  5420 tatccttatttattaattttattaggtctgcagcaacttaacctaattt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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