View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3092_low_8 (Length: 274)
Name: NF3092_low_8
Description: NF3092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3092_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 36657680 - 36657932
Alignment:
| Q |
1 |
aatgtttgtgaagcactttatatggtcgaaactttaagtctcttatagttggttgtactaccctctaatgatagattcattagtaagaaatgagtagaca |
100 |
Q |
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| T |
36657680 |
aatgtttgtgaagcactttatatggtcgaaactttaagtctcttatagttggttgtactaccctctaatgatagattcattagtaagaaatgagtggaca |
36657779 |
T |
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| Q |
101 |
aatttttatatctaggatgagacaatgtcgaatgaaatgatgacattgttttgacaagtttcatgttttaaaaatggaattgttaacattaaacttctct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36657780 |
aatttttatatctaggatgagacaatgtcgaatgaaatgatgacattgttttgacaagtttcatgttttaaaaatggaattgttaacattaaacttctct |
36657879 |
T |
|
| Q |
201 |
gtggttgagtttgattattccagacaaatggtatcatgtttgtctacacttac |
253 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
36657880 |
gtggttgagtttgattatcccagacaaatggtatcatgtttgtctacacttac |
36657932 |
T |
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