View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3093_high_15 (Length: 272)
Name: NF3093_high_15
Description: NF3093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3093_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 2351644 - 2351443
Alignment:
| Q |
14 |
cacatatcttaataaattctcttccaaacatatcgatcataagtttaaaaccattaccacatgtgttaagagttaatttcctatcaatcgccccacacta |
113 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2351644 |
cacatatcttaataaattctcttctaaacatatcgatcataagtttaaaaccattaccacatgtgttaagagttaatttcctatcaatcgctccacacta |
2351545 |
T |
|
| Q |
114 |
tattgtcacttttcataattaacaactacccaaccatcaacaagaatttaaatattaataagagaaaacacaaagattatagatacaaattaaaatacta |
213 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2351544 |
tattgttacttttcataattaacaactacccaaccatcaacaagaatttaaatattaataagagaaaacacaaagattatagatacaaattaaaatacta |
2351445 |
T |
|
| Q |
214 |
ta |
215 |
Q |
| |
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|| |
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| T |
2351444 |
ta |
2351443 |
T |
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