View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3093_high_25 (Length: 232)
Name: NF3093_high_25
Description: NF3093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3093_high_25 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 32782790 - 32782987
Alignment:
| Q |
19 |
cattatatgcatatgtaagccatcacatgaattctccaagctcaaaacctagtacaaatggttccacttttaatctaaggaatcaattaagataaagaat |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32782790 |
cattatatgcatatgtaagccatcacatgaattctccaagctcaaaacctagtacaaatggttccacttttaatctaaggaatcaattaagataaagaat |
32782889 |
T |
|
| Q |
119 |
ttaaaacgcggagtattgttgatgcctgtcattcaataatatttcgtccgaacatgttgatgcatatacagcaattccaataaactcttgaacttctt |
216 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32782890 |
ttaaaacgcagagtattgttaatgcctgtcattcaataatatttcgtccgaacatgttgatgcatatacagcaattccaataaactcttgaacttctt |
32782987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University