View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3093_high_29 (Length: 219)
Name: NF3093_high_29
Description: NF3093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3093_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 36952199 - 36952403
Alignment:
| Q |
1 |
ttttatatgaagctttgatttgaannnnnnnngctcaattctcaggtacactgtaggaaaaattacaccagttcctgcacgtgaagttcggtcgtctgat |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952199 |
ttttatatgaagctttgatttgaattttttttgctcaattctcaggtacactgtaggaaaaattacaccagttcctgcacgtgaagttcggtcgtctgat |
36952298 |
T |
|
| Q |
101 |
tttggagaaagagctagaataaggatgtactttcctaaggagggttcacaattgactcctccacactgttctgtagacttctactggaaagattattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
36952299 |
tttggagaaagagctagaataaggatgtactttcctaaggagggttcacaattgactcctccacactgttctgtagacttctactggaaagattattgcc |
36952398 |
T |
|
| Q |
201 |
ctatg |
205 |
Q |
| |
|
||||| |
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|
| T |
36952399 |
ctatg |
36952403 |
T |
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