View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3095_low_18 (Length: 271)
Name: NF3095_low_18
Description: NF3095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3095_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 28401170 - 28400918
Alignment:
| Q |
1 |
attggtagaaatatgttaaccctcgatcataaattagattaacaatttcaacatttttatggggtgagttagaagttgtggacatatataacatatcttt |
100 |
Q |
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| T |
28401170 |
attggtagaaatatgttaaccctcgatcataaattagattaacaatttcaacatttttatggggtgagttagaagttgtggacatata--acatatcttt |
28401073 |
T |
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| Q |
101 |
tattttgtaaaaatatatcatagacacctccataaaataccatacctataaacagaaaattaaccaaaattagggtttattatcaatataaattaagggt |
200 |
Q |
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| T |
28401072 |
tattttgtaaaaatatatcatagacacctccataaaataccatacctataaacagaaaattaaccaaaattagggtttattatcaatataaattaagggt |
28400973 |
T |
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| Q |
201 |
tttgttgaacacaaacaaacaaaaaactgcagtaagagggtgtgcatgcactaat |
255 |
Q |
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| T |
28400972 |
tttgttgaacacaaacaaacaaaaaactgcagtaagagtgtgtgcatgcactaat |
28400918 |
T |
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