View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3096-Insertion-14 (Length: 274)
Name: NF3096-Insertion-14
Description: NF3096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3096-Insertion-14 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 8 - 274
Target Start/End: Complemental strand, 32302180 - 32301914
Alignment:
| Q |
8 |
caagcaacactagagatgtgaacagctaccatcttgcaacataaccatacgagtgaaaccactacgaaacaacttccagctggcatcgttaaggaaacaa |
107 |
Q |
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| T |
32302180 |
caagcaacactagagatgtgaacagctaccatcttgcaacataaccatatgagtgaaaccactacggcacaacttccagctagcatcgttaaggaaacaa |
32302081 |
T |
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| Q |
108 |
caaacacaagatatgagaaacccaagtaaaagaagatgcagaaagatccgaaattaaagtccagatttaccaaacaaccgagaaaaagtagtttaataat |
207 |
Q |
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| T |
32302080 |
caaacacaagatatgagaaacccaagtaaaagaagatgcagaaagatccgaaataaaagtccagatttaccaaacaaccgagaaaaagtagtctaataat |
32301981 |
T |
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| Q |
208 |
aatatgaacgattataggtgattttgggaaattaatacaaattttaaaaaatcattattttatctac |
274 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32301980 |
aatatgaacgattataggtgattttgggaaattaatacaaattttaaaaaatcattattttatctac |
32301914 |
T |
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