View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3096-Insertion-6 (Length: 875)

Name: NF3096-Insertion-6
Description: NF3096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3096-Insertion-6
NF3096-Insertion-6
[»] chr2 (70 HSPs)
chr2 (239-875)||(11810055-11810700)
chr2 (625-875)||(11802708-11802956)
chr2 (7-118)||(11809807-11809918)
chr2 (545-610)||(24393251-24393316)
chr2 (545-610)||(28771588-28771653)
chr2 (545-610)||(41187447-41187512)
chr2 (545-609)||(41778934-41778998)
chr2 (545-603)||(34903530-34903588)
chr2 (545-610)||(10332265-10332330)
chr2 (545-602)||(12413507-12413564)
chr2 (545-602)||(12425567-12425624)
chr2 (545-610)||(20120711-20120776)
chr2 (545-610)||(24593382-24593447)
chr2 (545-610)||(28163933-28163998)
chr2 (558-610)||(12124551-12124603)
chr2 (545-617)||(25274819-25274891)
chr2 (558-606)||(43356545-43356593)
chr2 (561-615)||(21558812-21558866)
chr2 (569-615)||(38835254-38835300)
chr2 (545-594)||(20455913-20455962)
chr2 (561-610)||(25186248-25186297)
chr2 (545-610)||(27411098-27411163)
chr2 (573-610)||(28277694-28277731)
chr2 (561-610)||(29734697-29734746)
chr2 (545-610)||(33063992-33064057)
chr2 (573-610)||(39068726-39068763)
chr2 (573-610)||(39761444-39761481)
chr2 (558-619)||(40099387-40099447)
chr2 (561-610)||(43117196-43117245)
chr2 (573-609)||(5980234-5980270)
chr2 (558-610)||(12124690-12124742)
chr2 (200-260)||(32517872-32517932)
chr2 (558-594)||(40096853-40096889)
chr2 (201-264)||(433149-433211)
chr2 (39-86)||(11802398-11802445)
chr2 (545-620)||(42200683-42200758)
chr2 (545-603)||(2256984-2257042)
chr2 (546-596)||(2434901-2434951)
chr2 (545-610)||(7052779-7052845)
chr2 (545-610)||(9799399-9799465)
chr2 (573-615)||(10065474-10065516)
chr2 (573-603)||(16204835-16204865)
chr2 (548-610)||(19179043-19179105)
chr2 (561-615)||(22571871-22571925)
chr2 (545-615)||(24592836-24592906)
chr2 (545-603)||(37320507-37320565)
chr2 (573-603)||(40967389-40967419)
chr2 (545-610)||(2687365-2687429)
chr2 (574-603)||(2794645-2794674)
chr2 (545-602)||(4056804-4056861)
chr2 (561-602)||(4509551-4509592)
chr2 (552-605)||(6579278-6579331)
chr2 (569-610)||(7350552-7350593)
chr2 (545-610)||(10735821-10735886)
chr2 (573-610)||(18231491-18231528)
chr2 (548-601)||(20239358-20239411)
chr2 (561-610)||(20565081-20565130)
chr2 (545-610)||(22523002-22523067)
chr2 (558-615)||(25598565-25598622)
chr2 (573-610)||(27244663-27244700)
chr2 (561-610)||(28202303-28202352)
chr2 (545-594)||(29544649-29544698)
chr2 (545-610)||(31048306-31048371)
chr2 (546-610)||(35287379-35287444)
chr2 (573-610)||(35685079-35685116)
chr2 (561-610)||(36474768-36474817)
chr2 (545-610)||(36547225-36547290)
chr2 (573-602)||(40799612-40799641)
chr2 (558-603)||(40874075-40874120)
chr2 (545-594)||(44746569-44746618)
[»] chr3 (62 HSPs)
chr3 (545-619)||(45096023-45096097)
chr3 (549-610)||(14160272-14160333)
chr3 (546-610)||(30200832-30200896)
chr3 (546-610)||(41087577-41087641)
chr3 (545-615)||(4216390-4216459)
chr3 (545-610)||(8113552-8113617)
chr3 (561-610)||(24428479-24428528)
chr3 (553-610)||(35492799-35492856)
chr3 (545-610)||(46483253-46483318)
chr3 (561-610)||(52453263-52453312)
chr3 (545-617)||(38869508-38869580)
chr3 (546-610)||(52119382-52119446)
chr3 (547-610)||(35191809-35191872)
chr3 (553-600)||(47039443-47039490)
chr3 (545-603)||(28266729-28266786)
chr3 (545-603)||(39100406-39100464)
chr3 (548-610)||(54230092-54230154)
chr3 (545-610)||(1149059-1149124)
chr3 (545-610)||(13800673-13800738)
chr3 (545-590)||(14771357-14771402)
chr3 (546-603)||(19468464-19468521)
chr3 (545-610)||(23147968-23148033)
chr3 (545-610)||(37920988-37921053)
chr3 (558-603)||(39869810-39869855)
chr3 (545-590)||(51614235-51614280)
chr3 (545-610)||(53996305-53996370)
chr3 (545-610)||(55126012-55126077)
chr3 (200-264)||(2861062-2861126)
chr3 (558-610)||(8139721-8139773)
chr3 (206-250)||(9318542-9318586)
chr3 (545-597)||(25505692-25505743)
chr3 (545-597)||(28130924-28130976)
chr3 (567-602)||(39438519-39438554)
chr3 (545-603)||(1456530-1456588)
chr3 (546-603)||(5239807-5239865)
chr3 (573-615)||(17507717-17507759)
chr3 (576-610)||(21245799-21245833)
chr3 (545-615)||(25441490-25441560)
chr3 (545-603)||(27397602-27397660)
chr3 (545-603)||(38130949-38131007)
chr3 (559-609)||(39822176-39822226)
chr3 (552-610)||(44579642-44579700)
chr3 (545-610)||(48263954-48264020)
chr3 (768-841)||(2153212-2153285)
chr3 (768-841)||(2176871-2176944)
chr3 (768-841)||(2184826-2184899)
chr3 (573-610)||(10926475-10926512)
chr3 (558-603)||(11969653-11969698)
chr3 (573-610)||(16980372-16980409)
chr3 (561-594)||(20296316-20296349)
chr3 (545-610)||(21513294-21513359)
chr3 (545-610)||(25340914-25340979)
chr3 (558-610)||(28170259-28170312)
chr3 (570-623)||(31247938-31247991)
chr3 (570-615)||(38221729-38221774)
chr3 (573-610)||(41258977-41259014)
chr3 (561-610)||(45431954-45432003)
chr3 (545-594)||(46226068-46226116)
chr3 (545-610)||(46469283-46469347)
chr3 (561-610)||(48315030-48315079)
chr3 (573-610)||(52904161-52904198)
chr3 (545-610)||(53207976-53208041)
[»] chr7 (55 HSPs)
chr7 (545-610)||(46987092-46987157)
chr7 (545-615)||(7872738-7872808)
chr7 (545-603)||(48527203-48527261)
chr7 (545-610)||(18714454-18714519)
chr7 (553-610)||(35142147-35142204)
chr7 (558-615)||(42336071-42336128)
chr7 (558-610)||(8227355-8227407)
chr7 (546-602)||(8237623-8237679)
chr7 (546-616)||(6768698-6768768)
chr7 (545-603)||(10236895-10236953)
chr7 (545-603)||(22777350-22777407)
chr7 (561-619)||(41250053-41250111)
chr7 (545-603)||(45425466-45425524)
chr7 (558-603)||(2618692-2618737)
chr7 (565-610)||(8615029-8615074)
chr7 (545-610)||(10244733-10244797)
chr7 (549-610)||(19982082-19982143)
chr7 (200-261)||(30627637-30627698)
chr7 (573-610)||(39926556-39926593)
chr7 (553-610)||(41029278-41029335)
chr7 (565-610)||(41527566-41527611)
chr7 (558-603)||(44106641-44106686)
chr7 (577-610)||(44797361-44797394)
chr7 (545-594)||(47155094-47155143)
chr7 (545-609)||(27462426-27462490)
chr7 (230-261)||(6030722-6030753)
chr7 (552-615)||(43579050-43579113)
chr7 (573-611)||(4340132-4340170)
chr7 (545-603)||(6384864-6384922)
chr7 (546-603)||(17816533-17816591)
chr7 (545-603)||(20103444-20103502)
chr7 (545-610)||(20135151-20135217)
chr7 (545-610)||(20243261-20243327)
chr7 (545-603)||(37624556-37624614)
chr7 (561-615)||(39280824-39280878)
chr7 (573-606)||(3584214-3584247)
chr7 (546-610)||(4491106-4491171)
chr7 (573-610)||(5458089-5458126)
chr7 (545-594)||(8084449-8084498)
chr7 (568-601)||(10461777-10461810)
chr7 (553-598)||(14671188-14671233)
chr7 (545-610)||(19416520-19416585)
chr7 (573-610)||(21050240-21050277)
chr7 (553-610)||(21105609-21105666)
chr7 (545-610)||(22690026-22690091)
chr7 (573-610)||(24991787-24991824)
chr7 (573-610)||(25246777-25246814)
chr7 (548-609)||(29237550-29237611)
chr7 (573-610)||(30857254-30857291)
chr7 (200-261)||(33228713-33228774)
chr7 (545-610)||(33610915-33610980)
chr7 (573-610)||(34568351-34568388)
chr7 (200-261)||(40013277-40013338)
chr7 (561-610)||(42095949-42095998)
chr7 (570-603)||(43982087-43982120)
[»] chr6 (34 HSPs)
chr6 (545-606)||(404173-404234)
chr6 (547-610)||(17829300-17829363)
chr6 (545-610)||(4450268-4450333)
chr6 (545-615)||(13655162-13655234)
chr6 (545-610)||(28758280-28758345)
chr6 (561-610)||(33824887-33824936)
chr6 (567-610)||(18256889-18256932)
chr6 (545-603)||(2726407-2726465)
chr6 (200-250)||(6266656-6266706)
chr6 (552-610)||(29069489-29069547)
chr6 (561-603)||(31971542-31971584)
chr6 (561-594)||(3358413-3358446)
chr6 (561-610)||(15187069-15187118)
chr6 (561-610)||(15473488-15473537)
chr6 (546-610)||(12276222-12276286)
chr6 (561-605)||(16125032-16125076)
chr6 (545-601)||(29431474-29431530)
chr6 (558-593)||(1918461-1918496)
chr6 (552-610)||(655746-655804)
chr6 (561-603)||(8637443-8637485)
chr6 (561-603)||(8834943-8834985)
chr6 (561-603)||(28231431-28231473)
chr6 (573-610)||(334146-334183)
chr6 (562-603)||(1794958-1794999)
chr6 (545-594)||(8569731-8569780)
chr6 (573-610)||(12425860-12425897)
chr6 (545-606)||(15291680-15291741)
chr6 (565-610)||(16130771-16130816)
chr6 (553-610)||(18254099-18254156)
chr6 (573-610)||(19554159-19554196)
chr6 (545-610)||(21847200-21847265)
chr6 (201-250)||(29479453-29479502)
chr6 (561-610)||(32193865-32193914)
chr6 (546-610)||(33975935-33976000)
[»] chr1 (75 HSPs)
chr1 (545-610)||(38448856-38448921)
chr1 (545-610)||(47528437-47528502)
chr1 (545-610)||(19262897-19262962)
chr1 (546-610)||(30937481-30937545)
chr1 (545-603)||(1408448-1408506)
chr1 (545-595)||(6000133-6000183)
chr1 (545-603)||(15382809-15382867)
chr1 (573-615)||(19533196-19533238)
chr1 (561-610)||(16967200-16967249)
chr1 (545-610)||(17283957-17284022)
chr1 (545-610)||(50638906-50638971)
chr1 (558-610)||(13054879-13054931)
chr1 (558-610)||(34808566-34808618)
chr1 (546-609)||(13615603-13615666)
chr1 (561-619)||(2817379-2817437)
chr1 (546-603)||(18091216-18091274)
chr1 (553-619)||(23405356-23405422)
chr1 (552-610)||(24124827-24124885)
chr1 (561-615)||(26803457-26803511)
chr1 (558-603)||(5031157-5031202)
chr1 (545-610)||(5907805-5907870)
chr1 (545-610)||(8210375-8210440)
chr1 (558-603)||(12500936-12500981)
chr1 (200-261)||(13116939-13117000)
chr1 (558-603)||(17221523-17221568)
chr1 (545-594)||(21638135-21638184)
chr1 (558-615)||(30795702-30795759)
chr1 (553-610)||(32944742-32944799)
chr1 (545-602)||(35011407-35011464)
chr1 (546-610)||(41916549-41916614)
chr1 (545-594)||(41973277-41973326)
chr1 (545-621)||(6645182-6645256)
chr1 (545-597)||(9639807-9639859)
chr1 (567-615)||(10843333-10843381)
chr1 (553-597)||(14644519-14644563)
chr1 (551-603)||(28039856-28039908)
chr1 (549-597)||(45481512-45481560)
chr1 (545-593)||(47961279-47961327)
chr1 (558-597)||(40613042-40613081)
chr1 (548-603)||(49875593-49875647)
chr1 (567-597)||(64690-64720)
chr1 (561-615)||(8269374-8269428)
chr1 (545-603)||(10132434-10132492)
chr1 (552-610)||(14880834-14880892)
chr1 (553-603)||(18056714-18056764)
chr1 (546-596)||(22335378-22335428)
chr1 (573-615)||(22946568-22946610)
chr1 (559-593)||(32864315-32864349)
chr1 (545-603)||(33153870-33153928)
chr1 (200-250)||(33845658-33845708)
chr1 (200-250)||(33948270-33948320)
chr1 (201-251)||(49632578-49632628)
chr1 (545-606)||(51429203-51429262)
chr1 (200-261)||(236583-236644)
chr1 (558-615)||(6809802-6809859)
chr1 (573-610)||(13794526-13794563)
chr1 (545-610)||(14520950-14521015)
chr1 (561-610)||(18166608-18166657)
chr1 (561-610)||(19620582-19620631)
chr1 (576-617)||(20267373-20267414)
chr1 (573-610)||(24324418-24324455)
chr1 (561-610)||(26755622-26755671)
chr1 (561-610)||(29739343-29739392)
chr1 (573-606)||(30548109-30548142)
chr1 (569-606)||(31962457-31962494)
chr1 (561-610)||(34521196-34521245)
chr1 (573-610)||(34733406-34733443)
chr1 (545-610)||(35473958-35474023)
chr1 (573-610)||(36228573-36228610)
chr1 (559-592)||(41019701-41019734)
chr1 (545-610)||(42888581-42888646)
chr1 (573-606)||(43843901-43843934)
chr1 (561-610)||(44507936-44507985)
chr1 (573-610)||(44641533-44641570)
chr1 (201-250)||(50248053-50248102)
[»] chr4 (67 HSPs)
chr4 (546-603)||(7371539-7371596)
chr4 (545-610)||(25978324-25978388)
chr4 (545-610)||(56551582-56551647)
chr4 (553-603)||(19908705-19908755)
chr4 (545-619)||(46676488-46676562)
chr4 (545-606)||(11166696-11166757)
chr4 (565-610)||(36203242-36203287)
chr4 (545-617)||(11144655-11144727)
chr4 (573-617)||(12439663-12439707)
chr4 (545-597)||(29568605-29568657)
chr4 (567-610)||(14577519-14577562)
chr4 (573-619)||(29808286-29808332)
chr4 (545-610)||(32139345-32139411)
chr4 (565-615)||(33413340-33413390)
chr4 (545-603)||(42316814-42316872)
chr4 (573-615)||(42756124-42756166)
chr4 (545-603)||(49473658-49473716)
chr4 (545-610)||(2539293-2539358)
chr4 (545-610)||(3936633-3936698)
chr4 (561-610)||(7230286-7230335)
chr4 (545-610)||(14542750-14542815)
chr4 (545-610)||(19854571-19854636)
chr4 (569-610)||(36489402-36489443)
chr4 (545-610)||(38470183-38470248)
chr4 (558-603)||(48955305-48955350)
chr4 (545-610)||(49041971-49042036)
chr4 (545-610)||(49949340-49949404)
chr4 (545-610)||(56497598-56497663)
chr4 (547-610)||(29346299-29346363)
chr4 (545-605)||(47806246-47806306)
chr4 (558-610)||(49308826-49308878)
chr4 (545-603)||(1701621-1701680)
chr4 (559-610)||(6789430-6789481)
chr4 (561-608)||(9783907-9783954)
chr4 (545-608)||(17216119-17216182)
chr4 (549-608)||(24785456-24785515)
chr4 (549-608)||(24822751-24822810)
chr4 (200-251)||(38882741-38882792)
chr4 (548-610)||(6474445-6474507)
chr4 (552-610)||(13121550-13121608)
chr4 (558-603)||(16612652-16612698)
chr4 (549-603)||(19124617-19124670)
chr4 (570-600)||(19332316-19332346)
chr4 (553-615)||(31352113-31352175)
chr4 (568-610)||(34247446-34247488)
chr4 (545-603)||(34595926-34595984)
chr4 (570-616)||(39093590-39093636)
chr4 (545-603)||(43034332-43034390)
chr4 (547-601)||(49952663-49952717)
chr4 (545-603)||(51298686-51298744)
chr4 (561-610)||(836241-836290)
chr4 (545-606)||(11269704-11269765)
chr4 (561-610)||(11949769-11949818)
chr4 (553-610)||(18915044-18915101)
chr4 (561-610)||(20383494-20383543)
chr4 (561-610)||(20799400-20799449)
chr4 (573-610)||(22040656-22040693)
chr4 (573-610)||(22279538-22279575)
chr4 (545-610)||(23304006-23304071)
chr4 (553-610)||(24664989-24665046)
chr4 (573-610)||(27674342-27674379)
chr4 (546-610)||(35832061-35832126)
chr4 (545-610)||(38416063-38416128)
chr4 (558-603)||(44221460-44221505)
chr4 (576-609)||(46434781-46434814)
chr4 (545-590)||(54294412-54294457)
chr4 (573-610)||(55061043-55061080)
[»] chr5 (56 HSPs)
chr5 (546-610)||(5846035-5846099)
chr5 (545-615)||(26376967-26377037)
chr5 (545-603)||(35109413-35109471)
chr5 (545-610)||(28207138-28207203)
chr5 (558-610)||(18391606-18391658)
chr5 (547-610)||(11017182-11017245)
chr5 (561-603)||(40445996-40446038)
chr5 (545-610)||(3445237-3445302)
chr5 (545-594)||(6624798-6624847)
chr5 (558-603)||(8544992-8545037)
chr5 (545-606)||(19783626-19783686)
chr5 (546-603)||(22498955-22499011)
chr5 (545-610)||(37932336-37932401)
chr5 (554-603)||(40056589-40056638)
chr5 (545-610)||(40715939-40716004)
chr5 (546-610)||(43354450-43354515)
chr5 (562-610)||(16133072-16133120)
chr5 (574-610)||(18147724-18147760)
chr5 (545-597)||(22901978-22902030)
chr5 (546-610)||(25603991-25604055)
chr5 (545-611)||(2530015-2530082)
chr5 (547-610)||(20074558-20074621)
chr5 (558-605)||(25607061-25607108)
chr5 (545-608)||(26655472-26655535)
chr5 (545-608)||(26927057-26927120)
chr5 (545-592)||(32339759-32339806)
chr5 (558-597)||(32806378-32806417)
chr5 (545-608)||(35412965-35413027)
chr5 (546-601)||(43406695-43406750)
chr5 (569-615)||(1669594-1669640)
chr5 (548-606)||(6898031-6898089)
chr5 (573-615)||(7861019-7861061)
chr5 (573-615)||(11844456-11844498)
chr5 (545-603)||(16531265-16531323)
chr5 (545-603)||(34702503-34702561)
chr5 (200-250)||(40199158-40199208)
chr5 (561-610)||(40541101-40541151)
chr5 (545-603)||(42168935-42168993)
chr5 (545-602)||(3222745-3222802)
chr5 (546-603)||(3671231-3671288)
chr5 (566-603)||(4432129-4432166)
chr5 (553-590)||(5107243-5107280)
chr5 (561-610)||(5485192-5485241)
chr5 (545-610)||(6489013-6489078)
chr5 (570-603)||(12672256-12672289)
chr5 (561-610)||(22394041-22394090)
chr5 (545-594)||(22522791-22522840)
chr5 (573-610)||(24485705-24485742)
chr5 (562-603)||(25709746-25709787)
chr5 (553-610)||(26409259-26409316)
chr5 (545-610)||(27679504-27679569)
chr5 (545-610)||(28604408-28604473)
chr5 (561-610)||(32200453-32200502)
chr5 (546-610)||(33928919-33928984)
chr5 (573-610)||(36321512-36321549)
chr5 (573-610)||(39610359-39610396)
[»] scaffold0026 (1 HSPs)
scaffold0026 (545-608)||(75333-75396)
[»] chr8 (49 HSPs)
chr8 (545-592)||(12700987-12701034)
chr8 (545-615)||(1244695-1244765)
chr8 (561-615)||(42208475-42208529)
chr8 (545-610)||(6314313-6314378)
chr8 (545-610)||(19778071-19778136)
chr8 (545-610)||(42367735-42367800)
chr8 (558-610)||(9656000-9656052)
chr8 (546-610)||(37749990-37750054)
chr8 (559-610)||(13477906-13477957)
chr8 (568-615)||(15299620-15299667)
chr8 (568-615)||(15479989-15480036)
chr8 (548-610)||(30623299-30623361)
chr8 (545-610)||(19260569-19260634)
chr8 (545-610)||(27587227-27587292)
chr8 (545-594)||(31832080-31832129)
chr8 (553-610)||(32192900-32192957)
chr8 (545-610)||(32555260-32555325)
chr8 (561-610)||(37938501-37938550)
chr8 (558-615)||(44019550-44019607)
chr8 (545-601)||(16843513-16843569)
chr8 (545-609)||(19488307-19488371)
chr8 (558-610)||(27750907-27750959)
chr8 (558-610)||(38282842-38282894)
chr8 (545-597)||(44975197-44975249)
chr8 (571-610)||(2060541-2060580)
chr8 (558-609)||(9070965-9071016)
chr8 (547-610)||(25890402-25890465)
chr8 (567-610)||(27718906-27718949)
chr8 (562-609)||(36781415-36781462)
chr8 (561-603)||(4263828-4263870)
chr8 (545-603)||(7553692-7553750)
chr8 (561-603)||(8442493-8442535)
chr8 (570-604)||(10256328-10256362)
chr8 (545-603)||(12748914-12748972)
chr8 (568-610)||(29652224-29652266)
chr8 (568-610)||(33482162-33482204)
chr8 (545-603)||(35102657-35102715)
chr8 (545-595)||(45396585-45396635)
chr8 (545-610)||(444419-444484)
chr8 (546-603)||(9067095-9067152)
chr8 (561-610)||(11708992-11709041)
chr8 (569-610)||(11759031-11759072)
chr8 (545-610)||(13575295-13575360)
chr8 (573-610)||(17704019-17704056)
chr8 (553-594)||(21557455-21557496)
chr8 (562-603)||(22948088-22948129)
chr8 (573-610)||(26773820-26773857)
chr8 (545-594)||(32051522-32051571)
chr8 (545-610)||(43962014-43962079)
[»] scaffold0040 (1 HSPs)
scaffold0040 (545-610)||(53767-53832)
[»] scaffold0005 (1 HSPs)
scaffold0005 (567-610)||(239813-239856)
[»] scaffold0238 (1 HSPs)
scaffold0238 (545-603)||(25402-25460)
[»] scaffold0328 (1 HSPs)
scaffold0328 (545-597)||(3339-3391)
[»] scaffold0204 (1 HSPs)
scaffold0204 (558-598)||(16169-16209)
[»] scaffold0019 (1 HSPs)
scaffold0019 (546-597)||(48666-48717)
[»] scaffold0160 (1 HSPs)
scaffold0160 (552-610)||(22917-22975)
[»] scaffold0143 (1 HSPs)
scaffold0143 (568-610)||(4472-4514)
[»] scaffold0038 (1 HSPs)
scaffold0038 (561-603)||(31928-31970)
[»] scaffold1694 (1 HSPs)
scaffold1694 (561-610)||(161-210)
[»] scaffold0735 (1 HSPs)
scaffold0735 (545-610)||(1534-1599)
[»] scaffold0126 (1 HSPs)
scaffold0126 (558-603)||(34891-34936)
[»] scaffold0066 (1 HSPs)
scaffold0066 (545-594)||(17526-17575)


Alignment Details
Target: chr2 (Bit Score: 446; Significance: 0; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 239 - 875
Target Start/End: Original strand, 11810055 - 11810700
Alignment:
Q  239 tttcgacattttt-gttagttgagttaaaatttttgtacgaaataggggaattgttaaagaaattaaacgtgaaaattatttaatataataccttaaaat 337  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  11810055 tttcgacattttttgttagttgagttaaaacttttgtatgaaatagggcaattgttaaagaaattaaacgtcaaaattatttaatataataccttaaagt 11810154  T
Q  338 tttacaaagtgaccctttacatataaaacttttcatttatttcnnnnnnnatttccttaacaatgcactaaagacggttgttagcacgacccttttaatt 437  Q
    |||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  11810155 tttacaaagtgaccctttacatataaaa-ttttcatttatttctttttttatttccttaacaatgcactaaagacagttgttaacacgacccttttaatt 11810253  T
Q  438 atagtaataggataagggagtaaattggtgcaaggaaagtagcttcatgcatcaataagataaaggtggaatgctctgtccttactcgagcctccgaccn 537  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||     
T  11810254 atagtaataggataagggagtaaattggtgtaaggaaagtagcttcatgcatcgataagataaaggtggaatgctctgtccttacccgagcctcggacct 11810353  T
Q  538 nnnnnnngtggtgtc-----------cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatgggaccacgg 626  Q
           ||||||||           |||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  11810354 ttttttggtggtgtctggggttcgtccggggttcgaaccccagactttgcacatattatgcattgtccttatcaactaagctagtttcacgggacaacgg 11810453  T
Q  627 tggaatgctctgctcatccctaaaagaaattggtaggatcaacttcatcttttacctgagccaatctttcaaaattagacttgaaatatttcacgccccc 726  Q
    | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11810454 tagaatgctctgctcatccctaaa-gaaattggtaggatcaacttcatcttttacctgagccaatctttcaaaattagacttgaaatatttcacgcccc- 11810551  T
Q  727 aagattttgcttcttcataacttgtattttctctatttactcctaaatcaaggtccctataattcaaatatgcagcccttggtccctttgatacataagg 826  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  11810552 aagattttgcttcttcataacttgtattttctctatttactcctaaatcaaggtccctataattcaaatatgcagctcttggaccctttgatacataagg 11810651  T
Q  827 tgtcatgtatgcatataactttctaatccaatccacatgctttggtgtt 875  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11810652 tgtcatgtatgcatataaccttctaatccaatccacatgctttggtgtt 11810700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 625 - 875
Target Start/End: Original strand, 11802708 - 11802956
Alignment:
Q  625 ggtggaatgctctgctcatccctaaaagaaattggtaggatcaacttcatcttttacctgagccaatctttcaaaattagacttgaaatatttcacgccc 724  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||||  | |  ||||||||||||||||||||||||||||||| ||||    
T  11802708 ggtggaatgctctgctcatgcctaaa-gaaattgttaggatcaacttcttcttttacaagtgttaatctttcaaaattagacttgaaatatttcatgccc 11802806  T
Q  725 ccaagattttgcttcttcataacttgtattttctctatttactcctaaatcaaggtccctataattcaaatatgcagcccttggtccctttgatacataa 824  Q
    | |||||||||||||||||||||||| |||  | || || ||||||| ||||||||||||||| |||||||||||  | ||||| | |||||| ||||||    
T  11802807 c-aagattttgcttcttcataacttgcattgccactgttcactcctatatcaaggtccctatagttcaaatatgctactcttgggcactttgaaacataa 11802905  T
Q  825 ggtgtcatgtatgcatataactttctaatccaatccacatgctttggtgtt 875  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  11802906 ggtgtcatgtatgcatataaccttctcatccaatccatatgctttggtgtt 11802956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 11809807 - 11809918
Alignment:
Q  7 atttatagcagtgatcaccatcgtgatccatcaacttcatgatggaaaatttagagagctaacttctcaaaagcattatggtatgtttggagtaaataaa 106  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11809807 atttatagcagtgatcaccatcgtgatccataaacttcatgatggaaaatttagagagctaacttctcaaaagcattatggtatgtttggagtaaataaa 11809906  T
Q  107 ttgtactggttt 118  Q
    ||||||| ||||    
T  11809907 ttgtactagttt 11809918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 24393316 - 24393251
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||    
T  24393316 gtggtgtccggggttcgaacctcagaccttgcatatattatgcattgtccttaacaactgagctaa 24393251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 28771653 - 28771588
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||    
T  28771653 gtggtgtccggggttcgaaccgcggatcttgcatatattatgcattgtccttaccaactgagctaa 28771588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 41187447 - 41187512
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||| || ||||||||||||    
T  41187447 gtggtgaccggggttcgaaccccggactttgcatattttatgcattgtccataccaactaagctaa 41187512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 545 - 609
Target Start/End: Original strand, 41778934 - 41778998
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||||||  ||||||| |||||    
T  41778934 gtggtggccgggattcgaacctcggaccttgcatatattatgcattgtccaaatcaactgagcta 41778998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 34903588 - 34903530
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||| |||||||||| ||| |||||||||||||||| |||||||| |||||    
T  34903588 gtggtgtccggggttcgaacctcagaccttgcatatattatgcactgtccttaccaact 34903530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 10332265 - 10332330
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| | |||||| ||||||| ||| || |||||||||||||||||||||||||||| ||||||    
T  10332265 gtggtggcggggttttgaacctccgaccttccatatattatgcattgtccttatcaactgagctaa 10332330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 602
Target Start/End: Complemental strand, 12413564 - 12413507
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaac 602  Q
    ||||||| |||| || ||||||| ||| ||||||||||||||||||||||||||||||    
T  12413564 gtggtgtacggggtttgaacctcagaccttgcatatattatgcattgtccttatcaac 12413507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 602
Target Start/End: Complemental strand, 12425624 - 12425567
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaac 602  Q
    ||||||| |||| || ||||||| ||| ||||||||||||||||||||||||||||||    
T  12425624 gtggtgtacggggtttgaacctcagaccttgcatatattatgcattgtccttatcaac 12425567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 20120711 - 20120776
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| || ||||| || || ||||||||||||||||||||||||| ||||| ||||||    
T  20120711 gtggtgtccgggatttgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaa 20120776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 24593447 - 24593382
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| | || |||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  24593447 gtggtgttcagggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 24593382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 28163998 - 28163933
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||| |||||||||| |||  ||||| |||||||||||||||||||||||| ||||||    
T  28163998 gtggtgtctgggattcgaacctcagaccgtgcatgtattatgcattgtccttatcaactgagctaa 28163933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 12124603 - 12124551
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  12124603 ttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 12124551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 617
Target Start/End: Original strand, 25274819 - 25274891
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatg 617  Q
    ||||||| |||| |||||||| | ||| || ||||||||||||||||| |||| ||||| |||||||||||||    
T  25274819 gtggtgttcggggttcgaaccccagaccttacatatattatgcattgttcttaccaactgagctaatttcatg 25274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 606
Target Start/End: Original strand, 43356545 - 43356593
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    |||||||||||||| |||||||||||||||||||| ||| |||||||||    
T  43356545 ttcgaacctcggaccttgcatatattatgcattgttcttgtcaactaag 43356593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 561 - 615
Target Start/End: Original strand, 21558812 - 21558866
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||||| ||||||||||||||||||||||||| || || |||||| ||||    
T  21558812 gaacctcggaccttgcatatattatgcattgtccttaccagctgagctaagttca 21558866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 615
Target Start/End: Original strand, 38835254 - 38835300
Alignment:
Q  569 gactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  38835254 gactttgcatatattatgcattgtccttaccaacttagctaagttca 38835300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 20455962 - 20455913
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  20455962 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgtcc 20455913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 25186248 - 25186297
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| |||||||| ||||||    
T  25186248 gaaccccggaccttgcatatattatgcattgtccatatcaactgagctaa 25186297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 27411163 - 27411098
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||  |||| |||||||| ||||||    
T  27411163 gtggtggccggggttcgaaccccggaccttgcatatattatgcaaggtccatatcaactgagctaa 27411098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 28277694 - 28277731
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  28277694 ttgcatatattatgcattgtccttaccaactaagctaa 28277731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 29734746 - 29734697
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| |||||||| ||||||    
T  29734746 gaaccacggaccttgcatatattatgcattgtccatatcaactgagctaa 29734697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 33064057 - 33063992
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||  |||||||  ||||| |||||||||||||||||||||| |||||||| ||||||    
T  33064057 gtggtggccggagttcgaactccggaccttgcatatattatgcattgtccatatcaactgagctaa 33063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 39068726 - 39068763
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  39068726 ttgcatatattatgcattgtccttatcaactgagctaa 39068763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 39761481 - 39761444
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  39761481 ttgcatatattatgcattgtccttatcaactgagctaa 39761444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 619
Target Start/End: Original strand, 40099387 - 40099447
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatggg 619  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||| ||||||  |||||||    
T  40099387 ttcgaacctcg-accttgcatatattatgcattgtccttaccaactgagctaagctcatggg 40099447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 43117196 - 43117245
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||| ||||||    
T  43117196 gaacctcagaccttgcatatattatgcattgtccttaccaactgagctaa 43117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 573 - 609
Target Start/End: Complemental strand, 5980270 - 5980234
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagcta 609  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5980270 ttgcatatattatgcattgtccttatcaactgagcta 5980234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 12124742 - 12124690
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||  ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  12124742 ttcgaactccggaccttgcatatattatgcattgtccttaccaactgagctaa 12124690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 32517872 - 32517932
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttga 260  Q
    ||||||||||||| ||||| | ||| ||||| |||||||||||||||||||| | ||||||    
T  32517872 ccggggttcgaacctcggtcatgacgtccagcctaacaatttcgacatttttatcagttga 32517932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 594
Target Start/End: Complemental strand, 40096889 - 40096853
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||||||| ||||||||||||||||||||||||||    
T  40096889 ttcgaacctcagactttgcatatattatgcattgtcc 40096853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 433211 - 433149
Alignment:
Q  201 cggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttgagtta 264  Q
    |||||||||||||||  | ||| ||||||| ||||||||||||||| |||||| ||||||||||    
T  433211 cggggttcgaacttcaatcacggcatccagcctaacaatttcgaca-ttttgtcagttgagtta 433149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 11802398 - 11802445
Alignment:
Q  39 aacttcatgatggaaaatttagagagctaacttctcaaaagcattatg 86  Q
    ||||||||||||||||||| ||| ||||||||| || |||||||||||    
T  11802398 aacttcatgatggaaaattcagaaagctaacttttccaaagcattatg 11802445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 620
Target Start/End: Complemental strand, 42200758 - 42200683
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatggga 620  Q
    |||||||||||  ||||||| || ||| |||||||||||||| |||||| ||| ||||| || ||| |||||||||    
T  42200758 gtggtgtccggaattcgaacatcagaccttgcatatattatgtattgtctttaccaactgagttaacttcatggga 42200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 2257042 - 2256984
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| |||||||| | ||| |||||||||||||||||||||| || |||||    
T  2257042 gtggtggccggggttcgaaccccagaccttgcatatattatgcattgtccataccaact 2256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 546 - 596
Target Start/End: Original strand, 2434901 - 2434951
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctt 596  Q
    ||||||||||| |||||||||| ||| ||  ||||||||||||||||||||    
T  2434901 tggtgtccgggattcgaacctcagaccttcaatatattatgcattgtcctt 2434951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 7052845 - 7052779
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatat-attatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| || || || ||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  7052845 gtggtgtccggggtttgagccccggaccttgcatattattatgcattgtccttaccaactgagctaa 7052779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 9799399 - 9799465
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatatt-atgcattgtccttatcaactaagctaa 610  Q
    |||||||  |||||||||||| || || ||||||||||| ||||||||||| | |||||||||||||    
T  9799399 gtggtgtttgggtttcgaaccccgaaccttgcatatatttatgcattgtccatttcaactaagctaa 9799465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 615
Target Start/End: Complemental strand, 10065516 - 10065474
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||    
T  10065516 ttgcatatattatgcattgtccttaccaacttagctaagttca 10065474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 603
Target Start/End: Original strand, 16204835 - 16204865
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||||||||||||||||||||||    
T  16204835 ttgcatatattatgcattgtccttatcaact 16204865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 548 - 610
Target Start/End: Original strand, 19179043 - 19179105
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||| |||||| | | ||| ||||||||||||||||||||||||| ||||| ||||||    
T  19179043 gtgttcgggattcgaagcgcagaccttgcatatattatgcattgtccttaccaactgagctaa 19179105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 615
Target Start/End: Original strand, 22571871 - 22571925
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||| ||||| |||||||||||||||||||||  |||||||| |||||| ||||    
T  22571871 gaaccccggacattgcatatattatgcattgtctatatcaactgagctaagttca 22571925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 615
Target Start/End: Original strand, 24592836 - 24592906
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||| ||||| || ||||| | ||| |||||||||||||||||||||| || ||||| |||||| ||||    
T  24592836 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagttca 24592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 37320507 - 37320565
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||  | ||||||||||| || ||||||||||||||||||||| ||| |||||    
T  37320507 gtggtgtccatggttcgaacctcgaaccttgcatatattatgcattgtctttaccaact 37320565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 603
Target Start/End: Original strand, 40967389 - 40967419
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||||||||||||||||||||||    
T  40967389 ttgcatatattatgcattgtccttatcaact 40967419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 2687365 - 2687429
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||| || |||||||| || ||||||||||||| ||||||||| |||| ||||| ||||||    
T  2687365 gtggtgtccagggttcgaacc-cgaactttgcatatataatgcattgttcttaccaactgagctaa 2687429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 603
Target Start/End: Original strand, 2794645 - 2794674
Alignment:
Q  574 tgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||||||||||||||||||||||    
T  2794645 tgcatatattatgcattgtccttatcaact 2794674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 602
Target Start/End: Complemental strand, 4056861 - 4056804
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaac 602  Q
    |||||| ||| | |||||||  ||||| ||||||||||||||||||||||||| ||||    
T  4056861 gtggtgcccgagattcgaactccggaccttgcatatattatgcattgtccttaccaac 4056804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 602
Target Start/End: Complemental strand, 4509592 - 4509551
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaac 602  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  4509592 gaaccttggaccttgcatatattatgcattgtccatatcaac 4509551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 605
Target Start/End: Original strand, 6579278 - 6579331
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaa 605  Q
    ||||| |||||||| | ||| |||||||||||||||||||| |||| |||||||    
T  6579278 ccgggattcgaaccccagaccttgcatatattatgcattgttcttaccaactaa 6579331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 610
Target Start/End: Complemental strand, 7350593 - 7350552
Alignment:
Q  569 gactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||||||| || ||||| ||||||    
T  7350593 gactttgcatatattatgcattgtccataccaactgagctaa 7350552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 10735821 - 10735886
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| ||||||||||||||||| |||| || ||||| ||||||    
T  10735821 gtggtggccggggtttgaaccccggaccttgcatatattatgcatcgtccctaccaactgagctaa 10735886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 18231491 - 18231528
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  18231491 ttgcatatattatgcattgtccttaccaactgagctaa 18231528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 601
Target Start/End: Complemental strand, 20239411 - 20239358
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaa 601  Q
    ||||||||| |||||||||  ||| |||||||||||||||||| ||| ||||||    
T  20239411 gtgtccgggattcgaaccttagaccttgcatatattatgcattatccctatcaa 20239358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 20565081 - 20565130
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  20565081 gaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20565130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 22523002 - 22523067
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || |||||||| || |||||||||||||| ||||||| || ||||| ||||||    
T  22523002 gtggtggccgggatttgaacctcgaaccttgcatatattatgtattgtccataccaactgagctaa 22523067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 615
Target Start/End: Original strand, 25598565 - 25598622
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||  |||| |||||||||||||||||||||| || ||||| |||||| ||||    
T  25598565 ttcgaaccctggaccttgcatatattatgcattgtccataccaactgagctaagttca 25598622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 27244700 - 27244663
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  27244700 ttgcatatattatgcattgtccctatcaactgagctaa 27244663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 28202352 - 28202303
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||| || ||||||||||||||||||| |||||||| ||||||    
T  28202352 gaacttcggaccttacatatattatgcattgtccctatcaactgagctaa 28202303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 29544698 - 29544649
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| || ||||| ||||| ||||||||||||||||||||||    
T  29544698 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 29544649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 31048306 - 31048371
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||| |||| || ||||||||| ||||||||||| ||| || | |||||||    
T  31048306 gtggtgtccggggttcgaatctcgaaccttgcatataatatgcattgtctttaccagcgaagctaa 31048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 35287379 - 35287444
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||| || ||||||    
T  35287379 tggtgtccggggttcgaaccccggacttggcatatatttatgaattgttcttatcatctgagctaa 35287444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 35685079 - 35685116
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  35685079 ttgcatatattatgcattgtccttaccaactgagctaa 35685116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 36474817 - 36474768
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||| ||||||||||||| |||||||| ||||||    
T  36474817 gaaccccggaccttgcatattttatgcattgtccctatcaactgagctaa 36474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 36547225 - 36547290
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| |||  ||||||||||  |||||||||||||||| |||| |||||| ||||| ||||||    
T  36547225 gtggtgtgcggaattcgaacctcaaactttgcatatattatacattatccttaccaactgagctaa 36547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 602
Target Start/End: Original strand, 40799612 - 40799641
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaac 602  Q
    ||||||||||||||||||||||||||||||    
T  40799612 ttgcatatattatgcattgtccttatcaac 40799641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 40874075 - 40874120
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||| |||||| |||| ||||||||||||| ||||||||    
T  40874075 ttcgaacctcgaactttgtatattttatgcattgtccatatcaact 40874120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 44746618 - 44746569
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| |||||||| |||||||||||||| |||| ||||||||    
T  44746618 gtggtggccggggttcgaaccccggactttgcatattttatacattgtcc 44746569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 619
Target Start/End: Complemental strand, 45096097 - 45096023
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatggg 619  Q
    |||||||| ||| |||||||| | ||| ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  45096097 gtggtgtctggggttcgaaccacagaccttgcatatattatgcattgtccttatcaactgagctaagttcatggg 45096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 14160272 - 14160333
Alignment:
Q  549 tgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| |||||||| |||||||||||||||||||||||||| |||  ||||||||||||    
T  14160272 tgtccggggttcgaaccccggactttgcatatattatgcattgttcttgccaactaagctaa 14160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 30200896 - 30200832
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| ||||||||||  || ||||||||||||||||||||||||| ||||| ||||||    
T  30200896 tggtgtccggggttcgaacctcaaaccttgcatatattatgcattgtccttagcaactgagctaa 30200832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 41087641 - 41087577
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| |||| ||||||| || |||||| |||||||||||||||||||||| ||||||||||||    
T  41087641 tggtgttcgggcttcgaacttcagactttacatatattatgcattgtccttaccaactaagctaa 41087577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 615
Target Start/End: Original strand, 4216390 - 4216459
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||| || |||||||| || || ||||||||||||||||||||||||||||||| |||||| ||||    
T  4216390 gtggtgtccagggttcgaaccccg-accttgcatatattatgcattgtccttatcaactgagctaagttca 4216459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 8113552 - 8113617
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| ||||  ||||||||||||||||||||||||| ||||| ||||||    
T  8113552 gtggtggccgggattcgaaccgcggatcttgcatatattatgcattgtccttaccaactgagctaa 8113617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 24428479 - 24428528
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  24428479 gaacctcggactttgcatatattatgcattgtccataccaactgagctaa 24428528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 553 - 610
Target Start/End: Complemental strand, 35492856 - 35492799
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| ||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||    
T  35492856 cgggattcgaacctcgaactttgcatatattatgcattgttcttaccaactgagctaa 35492799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 46483318 - 46483253
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| | ||| |||||||  |||||||||||||||||||||||||||| || ||||||||||||    
T  46483318 gtggtggctggggttcgaactccggactttgcatatattatgcattgtccataccaactaagctaa 46483253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 52453263 - 52453312
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  52453263 gaacctcgaactttgcatatattatgcattgtccctattaactaagctaa 52453312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 617
Target Start/End: Original strand, 38869508 - 38869580
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatg 617  Q
    ||||||| || |||||||||||||||  ||| |||||||||||||||| |||| ||||| |||||| ||||||    
T  38869508 gtggtgttcgagtttcgaacctcggatcttgtatatattatgcattgttcttaccaactgagctaagttcatg 38869580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 52119446 - 52119382
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||| || || ||||||||||||||||||||||||| ||||| ||||||    
T  52119446 tggtggccggggttcgaaccccgaaccttgcatatattatgcattgtccttaccaactgagctaa 52119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 35191809 - 35191872
Alignment:
Q  547 ggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||| |||||||| | ||| ||||||||||||||||||||||||| ||||| ||||||    
T  35191809 ggtgtctggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaa 35191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 553 - 600
Target Start/End: Complemental strand, 47039490 - 47039443
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatca 600  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||    
T  47039490 cgggattcgaaccccgaactttgcatatattatgcattgtccttatca 47039443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 28266786 - 28266729
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||||  |||||| ||||| ||||||||||||||||||||||||| |||||    
T  28266786 gtggtgtccgggta-cgaaccccggaccttgcatatattatgcattgtccttaccaact 28266729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 39100406 - 39100464
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||||| |||||||||  || ||| |||||||||||||||| ||||||||||    
T  39100406 gtggtgtccgggtatcgaacctcaaaccttgtatatattatgcattgttcttatcaact 39100464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 610
Target Start/End: Original strand, 54230092 - 54230154
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||| |||||||| |  || ||||||||||||||||||||||||| ||||| ||||||    
T  54230092 gtgtccggggttcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagctaa 54230154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 1149059 - 1149124
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||| || ||||||||   ||| ||||||||||||||||||||||||| ||||| ||||||    
T  1149059 gtggtgtccagggttcgaaccctagaccttgcatatattatgcattgtccttaccaactgagctaa 1149124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 13800738 - 13800673
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||   |||| |||||||||||||||||||| |||| ||||| ||||||    
T  13800738 gtggtgtccggggttcgaactgtggaccttgcatatattatgcattgttcttaccaactgagctaa 13800673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 590
Target Start/End: Complemental strand, 14771402 - 14771357
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcatt 590  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||    
T  14771402 gtggtgtccgggattcgaacctcagaccttgcatatattatgcatt 14771357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 19468521 - 19468464
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| || |||||||| ||||| |||||||||||||||||||||| || |||||    
T  19468521 tggtgtcccggattcgaaccacggaccttgcatatattatgcattgtccataccaact 19468464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 23147968 - 23148033
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| |||| |||||||| ||||| | |||||||||||| |||||||||| ||||| ||||||    
T  23147968 gtggtgttcggggttcgaaccccggacctcgcatatattatgtattgtccttaccaactgagctaa 23148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 37920988 - 37921053
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| || ||||| | ||| |||||||||||||||||| ||| |||||||| ||||||    
T  37920988 gtggtgtccgggatttgaaccgcagacattgcatatattatgcattatccctatcaactgagctaa 37921053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 39869810 - 39869855
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||    
T  39869810 ttcgaacctcggaccttgtatatattatgcattgtccttaccaact 39869855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 590
Target Start/End: Complemental strand, 51614280 - 51614235
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcatt 590  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||    
T  51614280 gtggtgtccgggattcgaacctcggaccttgcatatattttgcatt 51614235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 53996370 - 53996305
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| | ||| |||||||||||||||||||||| || ||||| ||||||    
T  53996370 gtggtggccgggattcgaaccccagaccttgcatatattatgcattgtccataccaactgagctaa 53996305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 55126077 - 55126012
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||| || |||||||| || |||||||||||||| |||||||| ||||||| ||||||    
T  55126077 gtggtgtctggggtttgaacctcgaaccttgcatatattatgtattgtcctcatcaactgagctaa 55126012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 2861126 - 2861062
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttgagtta 264  Q
    |||| |||||||||||||| | ||| |||   ||||||||||||||||||| |||||||||||||    
T  2861126 ccggagttcgaacttcggtcatgacgtccgacctaacaatttcgacattttcgttagttgagtta 2861062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 8139773 - 8139721
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| ||| |||||||||||||||||||||| || ||||||| ||||    
T  8139773 ttcgaacctcagaccttgcatatattatgcattgtccataccaactaaactaa 8139721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 9318586 - 9318542
Alignment:
Q  206 ttcgaacttcggttacgacatccagtctaacaatttcgacatttt 250  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||    
T  9318586 ttcgaacatcggttatgacatccagcctaacaatttcgacatttt 9318542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 597
Target Start/End: Original strand, 25505692 - 25505743
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||||||||||||| |||||| | ||| |||||||||||||||||||||||||    
T  25505692 gtggtgtccgggtt-cgaaccccagaccttgcatatattatgcattgtcctta 25505743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 597
Target Start/End: Original strand, 28130924 - 28130976
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||||||||||| ||| |||| | ||| |||||||||||||||||||||||||    
T  28130924 gtggtgtccgggattcaaaccccagaccttgcatatattatgcattgtcctta 28130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 602
Target Start/End: Complemental strand, 39438554 - 39438519
Alignment:
Q  567 cggactttgcatatattatgcattgtccttatcaac 602  Q
    ||||||||||||||||||||||||||| ||||||||    
T  39438554 cggactttgcatatattatgcattgtctttatcaac 39438519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 1456530 - 1456588
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||| |||| ||||||| ||| ||||||||||||| |||||||| ||||||||    
T  1456530 gtggtggccgagttttgaacctcagaccttgcatatattatacattgtccctatcaact 1456588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 5239865 - 5239807
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaact 603  Q
    |||||||| || |||||||| ||||||||||||||| ||||||||||||  ||||||||    
T  5239865 tggtgtccagggttcgaaccccggactttgcatatatttatgcattgtctctatcaact 5239807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 615
Target Start/End: Original strand, 17507717 - 17507759
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||||||||||||  |||||||| |||||||||||    
T  17507717 ttgcatatattatgcattgtcaatatcaactgagctaatttca 17507759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 610
Target Start/End: Complemental strand, 21245833 - 21245799
Alignment:
Q  576 catatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| ||||||||||||    
T  21245833 catatattatgcattgtccttaccaactaagctaa 21245799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 615
Target Start/End: Original strand, 25441490 - 25441560
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||| ||||| || ||||| | ||| |||||||||||||||||||||| || ||||| |||||| ||||    
T  25441490 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccataccaactgagctaagttca 25441560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 27397602 - 27397660
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||| |||||||||  ||| ||||||||||||| |||||||| || |||||    
T  27397602 gtggtgtccggggttcgaaccttagaccttgcatatattatacattgtccataccaact 27397660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 38130949 - 38131007
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| || ||||| ||||| |||||||||||||||||||||| || |||||    
T  38130949 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 38131007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 39822176 - 39822226
Alignment:
Q  559 tcgaacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    ||||||| ||||| ||| ||||||||||||||||||||| ||||| |||||    
T  39822176 tcgaaccccggaccttgtatatattatgcattgtccttaccaactgagcta 39822226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 610
Target Start/End: Complemental strand, 44579700 - 44579642
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| |||||||| ||||| |||||||| ||||||||||||| || ||||| ||||||    
T  44579700 ccggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 44579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 48263954 - 48264020
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatatt-atgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||| | || || ||||||||||| ||||||||||| |||||||| ||||||    
T  48263954 gtggtgtccggggttcgaatcccgaaccttgcatatatttatgcattgtccctatcaactgagctaa 48264020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 768 - 841
Target Start/End: Complemental strand, 2153285 - 2153212
Alignment:
Q  768 cctaaatcaaggtccctataattcaaatatgcagcccttggtccctttgatacataaggtgtcatgtatgcata 841  Q
    ||||||||||| |||||||| ||  |||||||||| |||||   |||||| |||||||| ||||||||| ||||    
T  2153285 cctaaatcaagatccctatagttgtaatatgcagctcttggagactttgaaacataaggagtcatgtatccata 2153212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 768 - 841
Target Start/End: Complemental strand, 2176944 - 2176871
Alignment:
Q  768 cctaaatcaaggtccctataattcaaatatgcagcccttggtccctttgatacataaggtgtcatgtatgcata 841  Q
    ||||||||||| |||||||| ||  |||||||||| |||||   |||||| |||||||| ||||||||| ||||    
T  2176944 cctaaatcaagatccctatagttgtaatatgcagctcttggagactttgaaacataaggagtcatgtatccata 2176871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 768 - 841
Target Start/End: Complemental strand, 2184899 - 2184826
Alignment:
Q  768 cctaaatcaaggtccctataattcaaatatgcagcccttggtccctttgatacataaggtgtcatgtatgcata 841  Q
    ||||||||||| |||||||| ||  |||||||||| |||||   |||||| |||||||| ||||||||| ||||    
T  2184899 cctaaatcaagatccctatagttgtaatatgcagctcttggagactttgaaacataaggagtcatgtatccata 2184826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 10926512 - 10926475
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  10926512 ttgcatatattatgcattgtccttaccaactgagctaa 10926475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 11969653 - 11969698
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||||    
T  11969653 ttcgaacctcggaccttgcatgtattatgcattttccttaccaact 11969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 16980372 - 16980409
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  16980372 ttgcatatattatgcattgtccttaccaactgagctaa 16980409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 594
Target Start/End: Complemental strand, 20296349 - 20296316
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtcc 594  Q
    |||| |||||||||||||||||||||||||||||    
T  20296349 gaacatcggactttgcatatattatgcattgtcc 20296316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 21513359 - 21513294
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| | ||| |||||||| | ||| ||||||| ||||||||||||||||| ||||| ||||||    
T  21513359 gtggtggctgggattcgaaccccagaccttgcataaattatgcattgtccttaccaactgagctaa 21513294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 25340914 - 25340979
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| |||||||| ||||||||||||| || ||||| ||||||    
T  25340914 gtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 25340979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 28170259 - 28170312
Alignment:
Q  558 ttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||| ||||||| ||||||||||| | ||||| |||||||||    
T  28170259 ttcgaacctcggacttggcatatatttatgcattgttcctatcatctaagctaa 28170312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 623
Target Start/End: Original strand, 31247938 - 31247991
Alignment:
Q  570 actttgcatatattatgcattgtccttatcaactaagctaatttcatgggacca 623  Q
    ||||||||||||||||||||||| |||| ||||| | ||||  |||||||||||    
T  31247938 actttgcatatattatgcattgtacttaccaacttatctaagctcatgggacca 31247991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 615
Target Start/End: Complemental strand, 38221774 - 38221729
Alignment:
Q  570 actttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||| |||||||||||||||| |||||||||||| |||| ||||    
T  38221774 actttgtatatattatgcattgttcttatcaactaaactaagttca 38221729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 41259014 - 41258977
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  41259014 ttgcatatattatgcattgtccttaccaactaaactaa 41258977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 45432003 - 45431954
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  45432003 gaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 45431954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Original strand, 46226068 - 46226116
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  46226068 gtggtgtctggggttcgaacc-cggaccttgcatatattatgcattgtcc 46226116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 46469347 - 46469283
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| || || ||| ||||||||||||||||||||| ||||| ||||||    
T  46469347 gtggtggccgggattcgaaccccg-accttgaatatattatgcattgtccttaccaactgagctaa 46469283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 48315030 - 48315079
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||| |||||| ||||| ||||||    
T  48315030 gaaccccggaccttgcatatattatgcattatccttaccaactgagctaa 48315079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 52904161 - 52904198
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  52904161 ttgcatatattatgcattgtccttaccaactgagctaa 52904198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 53208041 - 53207976
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||  || |||||||| | ||| ||||||||||||||||||| ||||| ||||| ||||||    
T  53208041 gtggtgtcaagggttcgaaccccagaccttgcatatattatgcattgcccttaccaactgagctaa 53207976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 9e-17; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 46987157 - 46987092
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  46987157 gtggtgtccggggttcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 46987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 615
Target Start/End: Original strand, 7872738 - 7872808
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||| || |||||||| | ||| ||||||||||||||||||||||||| ||||| |||||| ||||    
T  7872738 gtggtgtcctgggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaagttca 7872808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 48527261 - 48527203
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| |||||||  ||||| |||||||||||||||||||||||||||||||    
T  48527261 gtggtggccgggattcgaactccggaccttgcatatattatgcattgtccttatcaact 48527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 18714519 - 18714454
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| |||| || ||||| ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  18714519 gtggtgtacggggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 18714454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 553 - 610
Target Start/End: Original strand, 35142147 - 35142204
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| ||||||||||  ||||||||||||||||||||||||| |||||||| ||||||    
T  35142147 cggggttcgaacctcaaactttgcatatattatgcattgtccatatcaactgagctaa 35142204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 558 - 615
Target Start/End: Complemental strand, 42336128 - 42336071
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||| |||||| ||||    
T  42336128 ttcgaaccccggaccttgcatgtattatgcattgtccttatcaactgagctaaattca 42336071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 8227407 - 8227355
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||| ||||||    
T  8227407 ttcgaaccctggactttacatatattatgcattgtccttatcaactgagctaa 8227355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 602
Target Start/End: Original strand, 8237623 - 8237679
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaac 602  Q
    ||||| ||||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  8237623 tggtggccggggtttgaacctcggactttgtatatattatgcattgtccttaccaac 8237679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 6768698 - 6768768
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcat 616  Q
    ||||||||| | |||||||||| ||| |||||||||||||||||||| ||||| |||  ||||||| ||||    
T  6768698 tggtgtccgagattcgaacctcagaccttgcatatattatgcattgttcttattaaccgagctaatctcat 6768768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 10236895 - 10236953
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||| ||||||||||| || ||||||| |||||||||||| |||| |||||    
T  10236895 gtggtgtccggggttcgaacctcgaaccttgcatacattatgcattgttcttaccaact 10236953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 22777350 - 22777407
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| |||||||| || || |||||||||||||||||||||||||||||||    
T  22777350 gtggtggccgggattcgaaccccg-accttgcatatattatgcattgtccttatcaact 22777407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 41250053 - 41250111
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatggg 619  Q
    ||||||||||| ||||||||||||| |||||| |||||||||| ||||||  |||||||    
T  41250053 gaacctcggaccttgcatatattatacattgttcttatcaactgagctaaactcatggg 41250111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 45425524 - 45425466
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| |||||||| || || ||||||||||||||||||||| |||||||||    
T  45425524 gtggtggccgggattcgaaccccgaaccttgcatatattatgcattgtctttatcaact 45425466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 2618737 - 2618692
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||    
T  2618737 ttcgaaccccggaccttgcatatattatgcattgtccttaccaact 2618692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 565 - 610
Target Start/End: Complemental strand, 8615074 - 8615029
Alignment:
Q  565 ctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  8615074 ctcggaccttgcatatattatgcattgtccttaccaactgagctaa 8615029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 10244797 - 10244733
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| |||||||| ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  10244797 gtggtggccgggttt-gaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 10244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 610
Target Start/End: Original strand, 19982082 - 19982143
Alignment:
Q  549 tgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||| |||| || |||||||||||||||| ||||||||||| ||||| ||||||    
T  19982082 tgtccggggttcaaaccccgcactttgcatatattattcattgtccttaacaactgagctaa 19982143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 30627698 - 30627637
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttgag 261  Q
    ||||||||||||| ||| | | |||||||  ||||||||||||||||||||||| |||||||    
T  30627698 ccggggttcgaacctcgatcatgacatccgatctaacaatttcgacatttttgtcagttgag 30627637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 39926556 - 39926593
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  39926556 ttgcatatattatgcattgtccttatcaactgagctaa 39926593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 610
Target Start/End: Complemental strand, 41029335 - 41029278
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||||| ||||| ||||||||||||| ||||||||||| ||||| ||||||    
T  41029335 cgggattcgaaccccggaccttgcatatattatacattgtccttaccaactgagctaa 41029278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 565 - 610
Target Start/End: Complemental strand, 41527611 - 41527566
Alignment:
Q  565 ctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||    
T  41527611 ctcggaccttgcatatattatgcattgtccataccaactaagctaa 41527566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 44106686 - 44106641
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||    
T  44106686 ttcgaacctcggactttgcatatattatgtattgtctctatcaact 44106641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 610
Target Start/End: Original strand, 44797361 - 44797394
Alignment:
Q  577 atatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||||||||||||    
T  44797361 atatattatgcattgtccttatcaactaagctaa 44797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 594
Target Start/End: Original strand, 47155094 - 47155143
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||||||||| ||||||||  |||| ||||||||||||||||||||||    
T  47155094 gtggtgtccggggttcgaaccctggaccttgcatatattatgcattgtcc 47155143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 609
Target Start/End: Original strand, 27462426 - 27462490
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    |||||| ||||| || ||||| ||||| |||||||||||||||||||||| || ||||| |||||    
T  27462426 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagcta 27462490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 261
Target Start/End: Original strand, 6030722 - 6030753
Alignment:
Q  230 gtctaacaatttcgacatttttgttagttgag 261  Q
    ||||||||||||||||||||||||||||||||    
T  6030722 gtctaacaatttcgacatttttgttagttgag 6030753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 615
Target Start/End: Original strand, 43579050 - 43579113
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||| || ||||| |||||| ||||    
T  43579050 ccggggttcgaacccaggactttgcatgtattatgcattgtccctaccaactgagctaagttca 43579113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 611
Target Start/End: Complemental strand, 4340170 - 4340132
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaat 611  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  4340170 ttgcatatattatgcattgtccttaccaactgagctaat 4340132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 6384922 - 6384864
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||  || |||||||| | ||| |||||||||||||||||||||||||| ||||    
T  6384922 gtggtgtctagggttcgaaccccagaccttgcatatattatgcattgtccttattaact 6384864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 17816591 - 17816533
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaact 603  Q
    |||||||| || |||||||| ||||||||||||||| ||||||||||||  ||||||||    
T  17816591 tggtgtccagggttcgaaccccggactttgcatatatttatgcattgtctctatcaact 17816533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 20103444 - 20103502
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| ||| |||||||| ||||| ||| | ||||||||||||||||||| |||||    
T  20103444 gtggtgtctggggttcgaaccccggaccttgtaaatattatgcattgtccttaccaact 20103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 20135151 - 20135217
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| ||||||||  |||| ||||||||| |||| ||||||| ||||||||| ||||||    
T  20135151 gtggtgtccggggttcgaacccgggaccttgcatatatttatacattgtctttatcaactgagctaa 20135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 20243327 - 20243261
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcata-tattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| ||| |||| ||||| ||||||| ||||||||||||||| || ||||| ||||||    
T  20243327 gtggtgtccggggttcaaaccccggaccttgcatattattatgcattgtccataccaactgagctaa 20243261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 37624614 - 37624556
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| |||||||| | ||| |||||||||||||||||||||| || |||||    
T  37624614 gtggtggccgggattcgaacccccgaccttgcatatattatgcattgtccataccaact 37624556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 615
Target Start/End: Original strand, 39280824 - 39280878
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||| ||||| |||||||||||||||||||| |||| ||||| |||||| ||||    
T  39280824 gaaccccggaccttgcatatattatgcattgttcttaccaactgagctaagttca 39280878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 3584247 - 3584214
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaag 606  Q
    ||||||||||||||||||||||||| ||||||||    
T  3584247 ttgcatatattatgcattgtccttaccaactaag 3584214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 4491106 - 4491171
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| |||||||||| ||||| ||||||| |||||||||||   |||||||| ||||||    
T  4491106 tggtgtccggggttcgaacctcagacttggcatatatttatgcattgttactatcaactgagctaa 4491171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 5458089 - 5458126
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  5458089 ttgcatatattatgcattgttcttatcaactgagctaa 5458126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 8084498 - 8084449
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| |||||||| ||||| |||||||| |||||||||||||    
T  8084498 gtggtggccggggttcgaaccccggaccttgcatattttatgcattgtcc 8084449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 601
Target Start/End: Original strand, 10461777 - 10461810
Alignment:
Q  568 ggactttgcatatattatgcattgtccttatcaa 601  Q
    |||||||| |||||||||||||||||||||||||    
T  10461777 ggactttgtatatattatgcattgtccttatcaa 10461810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 14671233 - 14671188
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttat 598  Q
    |||| |||||||| ||||| ||| ||||||||||||||||||||||    
T  14671233 cgggattcgaaccccggaccttgtatatattatgcattgtccttat 14671188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 19416585 - 19416520
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| |||||||| ||||||||||||| || ||||| ||||||    
T  19416585 gtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 19416520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 21050240 - 21050277
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  21050240 ttgcatatattatgcattgtccttaccaactgagctaa 21050277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 610
Target Start/End: Complemental strand, 21105666 - 21105609
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| ||||||||||| || |||||||||||||||||| ||| || ||||| ||||||    
T  21105666 cggggttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaa 21105609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 22690026 - 22690091
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||| |  || |||||||||||||||||| | |||| ||||| ||||||    
T  22690026 gtggtgtccggggttcgaaccccaaaccttgcatatattatgcattattcttagcaactgagctaa 22690091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 24991824 - 24991787
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  24991824 ttgcatatattatgcattgtccttaccaactgagctaa 24991787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 25246814 - 25246777
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  25246814 ttgcatatattatgcattgtctttatcaactgagctaa 25246777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 548 - 609
Target Start/End: Original strand, 29237550 - 29237611
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    ||||||| | ||||||||  |||| |||||||||||||||||||| |||| ||||| |||||    
T  29237550 gtgtccgaggttcgaaccctggaccttgcatatattatgcattgttcttaccaactgagcta 29237611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 30857291 - 30857254
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| || ||||||||||||    
T  30857291 ttgcatatattatgcattgtccataccaactaagctaa 30857254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 33228774 - 33228713
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttgag 261  Q
    ||||||||||||| ||||| | | ||||| | |||||||||||||||||||||  |||||||    
T  33228774 ccggggttcgaacctcggtcatggcatccggcctaacaatttcgacatttttgccagttgag 33228713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 33610915 - 33610980
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||  |||||||  ||||| |||||||||||||||||||||| || ||||| ||||||    
T  33610915 gtggtggccggtgttcgaactccggaccttgcatatattatgcattgtccgtaacaactgagctaa 33610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 34568351 - 34568388
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  34568351 ttgcatatattatgcattatccttatcaactgagctaa 34568388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 40013338 - 40013277
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttgag 261  Q
    ||||||||||||| ||||| | | ||||| | |||||||||||| ||||||||| |||||||    
T  40013338 ccggggttcgaacctcggtcatggcatccggcctaacaatttcggcatttttgtcagttgag 40013277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 42095949 - 42095998
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| ||||||||||||||||| |||| ||| |||||||||||    
T  42095949 gaaccccggaccttgcatatattatgcatggtccatataaactaagctaa 42095998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Complemental strand, 43982120 - 43982087
Alignment:
Q  570 actttgcatatattatgcattgtccttatcaact 603  Q
    ||||| ||||||||||||||||||||||||||||    
T  43982120 actttacatatattatgcattgtccttatcaact 43982087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 9e-17; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 404234 - 404173
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  404234 gtggtgtctggggttcgaacctcggacattgcatatattatgcattgtccttaccaactaag 404173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 17829300 - 17829363
Alignment:
Q  547 ggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  17829300 ggtgttcggggttcgaacctcggactttgcatatattatgcatagtccttaccaactgagctaa 17829363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 4450333 - 4450268
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||| | |||||||| ||||| ||||||||||||||||||||| ||||||||| ||||||    
T  4450333 gtggtgaccgagattcgaaccccggaccttgcatatattatgcattgtctttatcaactgagctaa 4450268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 615
Target Start/End: Complemental strand, 13655234 - 13655162
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatat--tatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||| || ||||||||||||||||| |||||||  ||||||||||||||| ||||| || ||||||||    
T  13655234 gtggtgtccagggttcgaacctcggactttacatatatattatgcattgtccttaccaactgagttaatttca 13655162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 28758280 - 28758345
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||| |||| || || ||||||    
T  28758280 gtggtgttcggggtttgaacctcggactttgcatatattatgcattgttcttaccagctgagctaa 28758345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 33824936 - 33824887
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  33824936 gaaccccggaccttgcatatattatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 567 - 610
Target Start/End: Complemental strand, 18256932 - 18256889
Alignment:
Q  567 cggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||    
T  18256932 cggaccttgcatatattatgcattgtccttatcaactgagctaa 18256889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 2726407 - 2726465
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| |||||||| ||||| |||||||||||||||||||||| || |||||    
T  2726407 gtggtgaccggggttcgaaccccggaccttgcatatattatgcattgtccataccaact 2726465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 6266706 - 6266656
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttt 250  Q
    |||||||||||||| |||| | ||||||| |||||||||||||||||||||    
T  6266706 ccggggttcgaactccggtcatgacatccggtctaacaatttcgacatttt 6266656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 610
Target Start/End: Complemental strand, 29069547 - 29069489
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| || ||||||| |||||| ||||||||||||||||||| |||||||| ||||||    
T  29069547 ccggggtttgaacctcagacttttcatatattatgcattgtccctatcaactgagctaa 29069489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 561 - 603
Target Start/End: Complemental strand, 31971584 - 31971542
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||| ||||||||||||||||||||||||| |||||    
T  31971584 gaacctcggaccttgcatatattatgcattgtccttaccaact 31971542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 594
Target Start/End: Complemental strand, 3358446 - 3358413
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtcc 594  Q
    ||||||||||||||||||||||||||||||||||    
T  3358446 gaacctcggactttgcatatattatgcattgtcc 3358413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 15187118 - 15187069
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| |||||||||||||||||||| ||||||| || ||||||    
T  15187118 gaacctcggaccttgcatatattatgcattgtacttatcagctgagctaa 15187069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 15473488 - 15473537
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| |||||||||||||||||||| ||||||| || ||||||    
T  15473488 gaacctcggaccttgcatatattatgcattgtacttatcagctgagctaa 15473537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 12276222 - 12276286
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||| | |||||| | || ||||||||||||||||||||||| |||| ||||| ||||||    
T  12276222 tggtgtccgagattcgaatcccgaactttgcatatattatgcattgttcttaccaactgagctaa 12276286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 561 - 605
Target Start/End: Original strand, 16125032 - 16125076
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaa 605  Q
    |||||||||||||||||||||||||||||||| | || |||||||    
T  16125032 gaacctcggactttgcatatattatgcattgttcataccaactaa 16125076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 601
Target Start/End: Complemental strand, 29431530 - 29431474
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaa 601  Q
    ||||||||||||  ||||||||| ||| || |||| |||||||||||||||||||||    
T  29431530 gtggtgtccggggatcgaacctcagaccttacatacattatgcattgtccttatcaa 29431474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 593
Target Start/End: Original strand, 1918461 - 1918496
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtc 593  Q
    |||||||||||||| |||||||||||||||||||||    
T  1918461 ttcgaacctcggaccttgcatatattatgcattgtc 1918496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 610
Target Start/End: Original strand, 655746 - 655804
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| |||||||| ||||| |||||||||||||||||||||  || ||||| ||||||    
T  655746 ccggggttcgaaccccggaccttgcatatattatgcattgtcgataccaactgagctaa 655804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 603
Target Start/End: Original strand, 8637443 - 8637485
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||| |||||||||||||||||||||| || |||||    
T  8637443 gaacctcggaccttgcatatattatgcattgtccctaccaact 8637485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 603
Target Start/End: Complemental strand, 8834985 - 8834943
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  8834985 gaaccccggactttgcatacattatgcattatccttatcaact 8834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 603
Target Start/End: Original strand, 28231431 - 28231473
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||    
T  28231431 gaaccccggaccttgcatatattatgcattgtccctatcaact 28231473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 334183 - 334146
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  334183 ttgcatatattatgcattgtctttatcaactgagctaa 334146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Original strand, 1794958 - 1794999
Alignment:
Q  562 aacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||| || ||||||||||||||||||| ||||||||    
T  1794958 aacctcggaccttacatatattatgcattgtccatatcaact 1794999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 8569780 - 8569731
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| || ||||| ||||| ||||||||||||||||||||||    
T  8569780 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 8569731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 12425860 - 12425897
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  12425860 ttgcatatattatgcattgttcttagcaactaagctaa 12425897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 15291680 - 15291741
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    ||||||||||   ||||||||||  || ||||||||||||| ||||||||||| ||||||||    
T  15291680 gtggtgtccgaagttcgaacctcaaaccttgcatatattattcattgtccttaccaactaag 15291741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 610
Target Start/End: Complemental strand, 16130816 - 16130771
Alignment:
Q  565 ctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| |||||||| ||||||||||||| || ||||||||||||    
T  16130816 ctcggaccttgcatattttatgcattgtccataccaactaagctaa 16130771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 610
Target Start/End: Original strand, 18254099 - 18254156
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||| | ||||| |||||| |||||||||||||||||| ||||| ||||||    
T  18254099 cggggttcgaatcccggaccttgcatgtattatgcattgtccttaccaactgagctaa 18254156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 19554196 - 19554159
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  19554196 ttgcatatattatgcattgtctttaccaactaagctaa 19554159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 21847265 - 21847200
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| || || |||||||||||||| ||||||| || ||||| ||||||    
T  21847265 gtggtggccgggattcgaaccccgtaccttgcatatattatgtattgtccctaccaactgagctaa 21847200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 29479502 - 29479453
Alignment:
Q  201 cggggttcgaacttcggttacgacatccagtctaacaatttcgacatttt 250  Q
    |||||||||||   |||||| ||||||||| |||||||||||||||||||    
T  29479502 cggggttcgaatcccggttatgacatccagcctaacaatttcgacatttt 29479453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 32193865 - 32193914
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| || |||||||||||||||||||| |||| ||||| ||||||    
T  32193865 gaacctcgtaccttgcatatattatgcattgttcttaccaactgagctaa 32193914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 33976000 - 33975935
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| |||||||| |||||||  |||||| ||||||||||| | |||||||| ||||||    
T  33976000 tggtgtccggggttcgaaccccggacttgacatatatttatgcattgttcctatcaactgagctaa 33975935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 9e-17; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 38448856 - 38448921
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  38448856 gtggtgtccgggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 38448921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 47528437 - 47528502
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||||||| ||||| ||||||    
T  47528437 gtggtgtccggggttcgaacctcggaccttgcgtatattatgcattgtccttaccaactgagctaa 47528502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 19262897 - 19262962
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||| |||||||| || ||||||||||| |||||||||||||||||||||| ||||||    
T  19262897 gtggtgtctggggttcgaaccccgaactttgcatatgttatgcattgtccttatcaactgagctaa 19262962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 30937545 - 30937481
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||  |||||||| | ||| ||||||||||||| ||||||||||||||||||||||||    
T  30937545 tggtgtccggagttcgaaccccagaccttgcatatattatacattgtccttatcaactaagctaa 30937481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 1408506 - 1408448
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||  ||||||| ||| |||||||||||||||||||||||||||| |||||    
T  1408506 gtggtgtccggaattcgaacttcgaactttgcatatattatgcattgtccttaccaact 1408448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 595
Target Start/End: Original strand, 6000133 - 6000183
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcct 595  Q
    |||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  6000133 gtggtgtccggggtttgaacctcggaccttgcatatattatgcattgtcct 6000183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 15382809 - 15382867
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||| | ||||||||    
T  15382809 gtggtggccgggtttcgaacctcggaccttgcatatattatacattgttcatatcaact 15382867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 615
Target Start/End: Original strand, 19533196 - 19533238
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  19533196 ttgcatatattatgcattgtccttatcaactaagctaagttca 19533238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 16967200 - 16967249
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| || |||||||||||||||||||||| |||||||||||||||    
T  16967200 gaacctcgaaccttgcatatattatgcattgtccatatcaactaagctaa 16967249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 17284022 - 17283957
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||| || ||||||||  |||| ||||||||||||||||||||||||| ||||| ||||||    
T  17284022 gtggtgtccagggttcgaaccctggaccttgcatatattatgcattgtccttaccaactgagctaa 17283957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 50638906 - 50638971
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| ||||||||  |||| ||||||||||||||||||||||||| ||||| ||||||    
T  50638906 gtggtggccgggattcgaaccctggaccttgcatatattatgcattgtccttaccaactgagctaa 50638971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 13054931 - 13054879
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| ||| |||||||||||||||||||||| || ||||||||||||    
T  13054931 ttcgaacctccgaccttgcatatattatgcattgtccctaccaactaagctaa 13054879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 34808566 - 34808618
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||| ||||||    
T  34808566 ttcgaacctcgaaccttgcatatattatgcattgtccttaacaactgagctaa 34808618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 546 - 609
Target Start/End: Original strand, 13615603 - 13615666
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    |||||| |||| ||||||||| |||| |||||| |||||||||||||||||| ||||| |||||    
T  13615603 tggtgttcggggttcgaaccttggaccttgcatgtattatgcattgtccttaccaactgagcta 13615666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 561 - 619
Target Start/End: Original strand, 2817379 - 2817437
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatggg 619  Q
    |||| |||||| || |||||||||||||||||||||| ||||| |||||| ||||||||    
T  2817379 gaacttcggaccttacatatattatgcattgtccttaccaactgagctaaattcatggg 2817437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 18091274 - 18091216
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaact 603  Q
    ||||||||||| |||||||| ||||||||| ||||| ||||||||||||| ||||||||    
T  18091274 tggtgtccggggttcgaaccccggactttgtatatatttatgcattgtccctatcaact 18091216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 619
Target Start/End: Original strand, 23405356 - 23405422
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatggg 619  Q
    |||| ||||||||  |||| ||||||||||||||||||||||||| |||||||| |||  |||||||    
T  23405356 cgggattcgaaccctggaccttgcatatattatgcattgtccttaacaactaagttaagctcatggg 23405422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 610
Target Start/End: Original strand, 24124827 - 24124885
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||| ||||||| || ||||||||||||||||||||||||| ||||| ||||||    
T  24124827 ccgggattcaaacctcgaaccttgcatatattatgcattgtccttaacaactgagctaa 24124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 561 - 615
Target Start/End: Original strand, 26803457 - 26803511
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||| |||||||||||||||||||||||||||| || ||||| |||||| ||||    
T  26803457 gaaccccggactttgcatatattatgcattgtccataccaactgagctaagttca 26803511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 5031157 - 5031202
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| || |||||| |||||||||||||||||||||||||||    
T  5031157 ttcgaaccccgaactttgtatatattatgcattgtccttatcaact 5031202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 5907870 - 5907805
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| || |||||  |||| ||||||||||||||||||||||||  ||||| ||||||    
T  5907870 gtggtgtccggggtttgaaccctggaccttgcatatattatgcattgtccttgccaactgagctaa 5907805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 8210375 - 8210440
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| ||||||||  |||| ||| ||||||||||||||||||||| ||||||| ||||    
T  8210375 gtggtggccggggttcgaaccctggaccttgtatatattatgcattgtccttaccaactaaactaa 8210440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 12500981 - 12500936
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| || |||||||||||||||||||||||||||| |||||    
T  12500981 ttcgaaccccgaactttgcatatattatgcattgtccttaccaact 12500936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 13117000 - 13116939
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttgag 261  Q
    |||| |||||||| | ||| | ||| ||||| ||||||||||||||||||||||||||||||    
T  13117000 ccggagttcgaaccttggtcatgacgtccagcctaacaatttcgacatttttgttagttgag 13116939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 17221523 - 17221568
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||    
T  17221523 ttcgaacctcggaccttgcatatattatgcattgttcttaccaact 17221568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 21638184 - 21638135
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||||||||| |||||||| ||||| |||||||||| |||||||||||    
T  21638184 gtggtgtccggggttcgaaccccggaccttgcatatatcatgcattgtcc 21638135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 615
Target Start/End: Complemental strand, 30795759 - 30795702
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||| |||| |||||||||||||||||||| |||| ||||| |||||| ||||    
T  30795759 ttcgaaccttggaccttgcatatattatgcattgttcttaccaactgagctaagttca 30795702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 610
Target Start/End: Complemental strand, 32944799 - 32944742
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||||| | ||| |||||||||||||||||||||| || ||||||||||||    
T  32944799 cggggttcgaaccccagacgttgcatatattatgcattgtccataccaactaagctaa 32944742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 602
Target Start/End: Complemental strand, 35011464 - 35011407
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaac 602  Q
    ||||||| ||||||| |||||| | || |||||||||||||||||||||||| |||||    
T  35011464 gtggtgttcgggttttgaaccttgaaccttgcatatattatgcattgtccttgtcaac 35011407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 41916549 - 41916614
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatat-tatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| ||||||||  | ||||||||||||| |||||||||||| |||||||| ||||||    
T  41916549 tggtgtccggggttcgaaccctgaactttgcatatatgtatgcattgtccctatcaactgagctaa 41916614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 41973326 - 41973277
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  41973326 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgtcc 41973277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 621
Target Start/End: Original strand, 6645182 - 6645256
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatgggac 621  Q
    |||||||||||||| |||||| | || ||||||||| |||||||||||||||| ||||| |||||| |||| |||||    
T  6645182 gtggtgtccgggtt-cgaaccccaga-tttgcatattttatgcattgtccttaccaactgagctaagttcacgggac 6645256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 597
Target Start/End: Original strand, 9639807 - 9639859
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||||||||| | |||||||  ||||| |||||||||||||||||||||||||    
T  9639807 gtggtgtccgaggttcgaactccggaccttgcatatattatgcattgtcctta 9639859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 567 - 615
Target Start/End: Original strand, 10843333 - 10843381
Alignment:
Q  567 cggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||| |||||||||||||||||| |||||||||||| |||||| ||||    
T  10843333 cggaccttgcatatattatgcattatccttatcaactgagctaagttca 10843381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 597
Target Start/End: Original strand, 14644519 - 14644563
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||| ||| |||||| |||||||||||||||||||||||||||||    
T  14644519 cgggattcaaacctcagactttgcatatattatgcattgtcctta 14644563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 603
Target Start/End: Original strand, 28039856 - 28039908
Alignment:
Q  551 tccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||| |||||| ||| ||||||||||||||||||||||||| |||||    
T  28039856 tccggggttcaaacctcagaccttgcatatattatgcattgtccttaccaact 28039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 597
Target Start/End: Complemental strand, 45481560 - 45481512
Alignment:
Q  549 tgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  45481560 tgtccggagttcgaaccccggaccttgcatatattatgcattgtcctta 45481512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 593
Target Start/End: Original strand, 47961279 - 47961327
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtc 593  Q
    |||||| | ||||||| |||||||||| |||||||||||||||||||||    
T  47961279 gtggtggctgggtttcaaacctcggaccttgcatatattatgcattgtc 47961327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 597
Target Start/End: Complemental strand, 40613081 - 40613042
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  40613081 ttcgaaccccggaccttgcatatattatgcattgtcctta 40613042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 603
Target Start/End: Original strand, 49875593 - 49875647
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||| ||||||| | |||| ||||||||||||||||||||||||| |||||    
T  49875593 gtgtccggggttcgaacat-ggaccttgcatatattatgcattgtccttaccaact 49875647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 567 - 597
Target Start/End: Original strand, 64690 - 64720
Alignment:
Q  567 cggactttgcatatattatgcattgtcctta 597  Q
    |||||||||||||||||||||||||||||||    
T  64690 cggactttgcatatattatgcattgtcctta 64720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 615
Target Start/End: Original strand, 8269374 - 8269428
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||| ||||| |||||||||||||| |||||||||| ||||| |||||| ||||    
T  8269374 gaaccccggaccttgcatatattatgtattgtccttaccaactgagctaagttca 8269428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 10132434 - 10132492
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||  | |||||||| | ||| ||||||||||||||||||||||||| |||||    
T  10132434 gtggtgtccaaggttcgaaccccagaccttgcatatattatgcattgtccttaccaact 10132492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 610
Target Start/End: Complemental strand, 14880892 - 14880834
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| || ||||||| ||| |||||||||||||||||||||| ||  |||||||||||    
T  14880892 ccgggatttgaacctcagaccttgcatatattatgcattgtccctactaactaagctaa 14880834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 553 - 603
Target Start/End: Original strand, 18056714 - 18056764
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||| ||||||||||  || ||||||||||||||||||||||||| |||||    
T  18056714 cggggttcgaacctcacacattgcatatattatgcattgtccttaccaact 18056764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 546 - 596
Target Start/End: Complemental strand, 22335428 - 22335378
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctt 596  Q
    |||||| |||| || ||||||| ||| ||||||||||||||||||||||||    
T  22335428 tggtgttcggggtttgaacctcagaccttgcatatattatgcattgtcctt 22335378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 615
Target Start/End: Original strand, 22946568 - 22946610
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||||||||||| |||| |||||||||||| ||||    
T  22946568 ttgcatatattatgcattgttcttaccaactaagctaagttca 22946610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 593
Target Start/End: Complemental strand, 32864349 - 32864315
Alignment:
Q  559 tcgaacctcggactttgcatatattatgcattgtc 593  Q
    ||||||| |||||||||||||||||||||||||||    
T  32864349 tcgaaccccggactttgcatatattatgcattgtc 32864315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 33153870 - 33153928
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||| |||| || ||||||||||| || ||||||||||||||||||| || |||||    
T  33153870 gtggtgttcggggtttgaacctcggaccttacatatattatgcattgtccctaccaact 33153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 33845658 - 33845708
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttt 250  Q
    |||||||||||||| |||| | ||||||| |||||||||||||| ||||||    
T  33845658 ccggggttcgaactccggtcatgacatccggtctaacaatttcggcatttt 33845708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 33948320 - 33948270
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttt 250  Q
    |||||||||||||| |||| | ||||||| |||||||||||||| ||||||    
T  33948320 ccggggttcgaactccggtcatgacatccggtctaacaatttcggcatttt 33948270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 49632628 - 49632578
Alignment:
Q  201 cggggttcgaacttcggttacgacatccagtctaacaatttcgacattttt 251  Q
    |||||||||||| ||||| | ||||||||| |||||||||||| |||||||    
T  49632628 cggggttcgaacctcggtcatgacatccagcctaacaatttcggcattttt 49632578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 51429203 - 51429262
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    |||||||||||| |||||||| ||||| | ||||||  ||||||||||||||| ||||||||    
T  51429203 gtggtgtccggggttcgaaccccggacctagcatat--tatgcattgtccttaccaactaag 51429262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 236644 - 236583
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttttgttagttgag 261  Q
    |||||||||||||  |||| | ||| ||| | |||||||||||||||||||||| |||||||    
T  236644 ccggggttcgaaccccggtcatgacgtccggcctaacaatttcgacatttttgtcagttgag 236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 615
Target Start/End: Original strand, 6809802 - 6809859
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||| | ||| |||||||||||||||||||||||||  |||| |||||| ||||    
T  6809802 ttcgaaccccagacattgcatatattatgcattgtccttacaaactgagctaagttca 6809859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 13794526 - 13794563
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  13794526 ttgcatatattatgcattatccttatcaactgagctaa 13794563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 14521015 - 14520950
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| |  ||||||||||| ||||||||||||| || ||||| ||||||    
T  14521015 gtggtggccggggttcgaaccccaaactttgcatattttatgcattgtccataccaactgagctaa 14520950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 18166657 - 18166608
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| |||||||||||||||||||||||||||  || ||||| ||||||    
T  18166657 gaaccccggactttgcatatattatgcattgtctataccaactgagctaa 18166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 19620631 - 19620582
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||| |||||||||| ||||| ||||||    
T  19620631 gaaccccggaccttgcatatattatgtattgtccttaccaactgagctaa 19620582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 617
Target Start/End: Original strand, 20267373 - 20267414
Alignment:
Q  576 catatattatgcattgtccttatcaactaagctaatttcatg 617  Q
    |||| ||||||||||||||||| |||||||||||| ||||||    
T  20267373 catagattatgcattgtccttaccaactaagctaaattcatg 20267414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 24324418 - 24324455
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||||||||| || ||||||    
T  24324418 ttgcatatattatgcattgtccttatcacctgagctaa 24324455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 26755671 - 26755622
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||| ||||||||||| |||||||| ||||||    
T  26755671 gaaccccggaccttgcatatataatgcattgtccatatcaactgagctaa 26755622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 29739392 - 29739343
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||| ||||||    
T  29739392 gaaccccggaccttgcatattttatgcattgtccttaccaactgagctaa 29739343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 606
Target Start/End: Original strand, 30548109 - 30548142
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaag 606  Q
    ||||||||||||||||||||||||| ||||||||    
T  30548109 ttgcatatattatgcattgtccttaccaactaag 30548142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Complemental strand, 31962494 - 31962457
Alignment:
Q  569 gactttgcatatattatgcattgtccttatcaactaag 606  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  31962494 gactttacatatattatgcattgtccttaccaactaag 31962457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 34521196 - 34521245
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  34521196 gaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 34521245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 34733443 - 34733406
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  34733443 ttgcatatattatgcattgtccttaccaactgagctaa 34733406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 35474023 - 35473958
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| ||||||||  | || |||||||||||||||||| |||||| ||| | ||||||    
T  35474023 gtggtgtccggggttcgaaccctgaaccttgcatatattatgcattatccttaccaattgagctaa 35473958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 36228610 - 36228573
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  36228610 ttgcatattttatgcattgtccatatcaactaagctaa 36228573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 592
Target Start/End: Original strand, 41019701 - 41019734
Alignment:
Q  559 tcgaacctcggactttgcatatattatgcattgt 592  Q
    ||||||||| ||||||||||||||||||||||||    
T  41019701 tcgaacctcagactttgcatatattatgcattgt 41019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 42888646 - 42888581
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| | ||| |||||||| ||||| |||||||| ||||||||||||| || ||||| ||||||    
T  42888646 gtggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 42888581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 606
Target Start/End: Complemental strand, 43843934 - 43843901
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaag 606  Q
    ||||||||||||||||||||||||| ||||||||    
T  43843934 ttgcatatattatgcattgtccttaccaactaag 43843901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 44507936 - 44507985
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| ||||||||||||| ||||||||| | ||||| ||||||    
T  44507936 gaacctcggaccttgcatatattatacattgtcctaaccaactgagctaa 44507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 44641570 - 44641533
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  44641570 ttgcatatattatgcattgtccatatcaactgagctaa 44641533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 50248102 - 50248053
Alignment:
Q  201 cggggttcgaacttcggttacgacatccagtctaacaatttcgacatttt 250  Q
    |||||||||||| ||||| | ||||||| | |||||||||||||||||||    
T  50248102 cggggttcgaacctcggtcatgacatccggcctaacaatttcgacatttt 50248053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 603
Target Start/End: Original strand, 7371539 - 7371596
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  7371539 tggtgtccggggttcgaaccccggaccttgcatatattatgtattgtccttatcaact 7371596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 25978388 - 25978324
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  25978388 gtggtgtctgggattcgaacctcggaccttgcatatattatgcattgtcctta-caactgagctaa 25978324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 56551582 - 56551647
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  56551582 gtggtggccggggtttgaacctcggaccttgcatatattatgcattgtccttaccaactgagctaa 56551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 603
Target Start/End: Complemental strand, 19908755 - 19908705
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  19908755 cggggttcgaacctcggaccttgcatatattatgcattgtccttaccaact 19908705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 619
Target Start/End: Original strand, 46676488 - 46676562
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatggg 619  Q
    |||||||| |||  ||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||  |||||||    
T  46676488 gtggtgtctgggggtcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcatggg 46676562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 11166757 - 11166696
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    |||||||||||| |||||||||  ||| ||||||||||||| ||||||||||| ||||||||    
T  11166757 gtggtgtccggggttcgaaccttagaccttgcatatattatacattgtccttaccaactaag 11166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 565 - 610
Target Start/End: Complemental strand, 36203287 - 36203242
Alignment:
Q  565 ctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  36203287 ctcggaccttgcatatattatgcattgtccttatcaactgagctaa 36203242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 617
Target Start/End: Original strand, 11144655 - 11144727
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttcatg 617  Q
    |||||||||||| ||| |||| | ||| ||||||||||||||||||||| ||||||||| || ||| ||||||    
T  11144655 gtggtgtccggggttcaaaccccagaccttgcatatattatgcattgtctttatcaactgaggtaagttcatg 11144727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 617
Target Start/End: Complemental strand, 12439707 - 12439663
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttcatg 617  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  12439707 ttgcatatattatgcattgtccttatcaactgagctaagttcatg 12439663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 597
Target Start/End: Complemental strand, 29568657 - 29568605
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||||||| ||| |||||||||||||| || ||||||||||||||||||||||    
T  29568657 gtggtgtctggggttcgaacctcggaccttacatatattatgcattgtcctta 29568605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 567 - 610
Target Start/End: Original strand, 14577519 - 14577562
Alignment:
Q  567 cggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||    
T  14577519 cggactttgcatatattatgcattgtccttaccaactgagctaa 14577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 573 - 619
Target Start/End: Original strand, 29808286 - 29808332
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttcatggg 619  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  29808286 ttgcatatattatgcattgtccttatcaactgatctaaattcatggg 29808332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 32139411 - 32139345
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||| ||||||| |||||||| ||||||    
T  32139411 gtggtgtccggggttcgaaccccggaccttgcatatatttatgtattgtccctatcaactgagctaa 32139345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 565 - 615
Target Start/End: Original strand, 33413340 - 33413390
Alignment:
Q  565 ctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||| ||| ||||||||||||||||||||||||||| |||||| ||||    
T  33413340 ctcggacattgaatatattatgcattgtccttatcaactgagctaaattca 33413390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 42316814 - 42316872
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| |||||||||||||| |||||||||||||||| |||| ||| |||||    
T  42316814 gtggtgaccgggattcgaacctcggaccttgcatatattatgcactgtctttaccaact 42316872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 573 - 615
Target Start/End: Original strand, 42756124 - 42756166
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  42756124 ttgcatatattatgcattgtccttatcaactgagctaagttca 42756166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 49473716 - 49473658
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| | ||| |||||||| ||||| ||||||||||||||||||||||||| |||||    
T  49473716 gtggtgactggggttcgaaccccggaccttgcatatattatgcattgtccttaccaact 49473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 2539293 - 2539358
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| ||||||||||| || |||||||||| |||| ||||| ||| ||||| ||||||    
T  2539293 gtggtgtccggggttcgaacctcgaacattgcatatatcatgcgttgtcattaccaactgagctaa 2539358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 3936698 - 3936633
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| ||||| |||||||||||||||||||| | || ||||| ||||||    
T  3936698 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgagctaa 3936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 7230335 - 7230286
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  7230335 gaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 7230286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 14542750 - 14542815
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| | || |||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  14542750 gtggtgttcagggttcgaaccccagaccttgcatatattatgcattgtccttgccaactaagctaa 14542815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 19854636 - 19854571
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| | |||||||| ||||  |||||||||||||||||||||| || ||||| ||||||    
T  19854636 gtggtgtccgaggttcgaaccccggatcttgcatatattatgcattgtccataccaactgagctaa 19854571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 610
Target Start/End: Original strand, 36489402 - 36489443
Alignment:
Q  569 gactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  36489402 gactttgcatatattatgcattgtccctaacaactaagctaa 36489443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 38470248 - 38470183
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| | |||||||  ||||| ||||||| ||||||||||||||||| ||||||| ||||    
T  38470248 gtggtgtccgcggttcgaactccggacattgcatacattatgcattgtccttaccaactaaactaa 38470183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 48955350 - 48955305
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| |||||||||||||||||| |||||||||||| |||||    
T  48955350 ttcgaaccccggactttgcatatattacgcattgtccttaccaact 48955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 49041971 - 49042036
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| |||||||||||||||||||||  ||||||||| |||||    
T  49041971 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtctatatcaactaggctaa 49042036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 49949404 - 49949340
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| | ||| ||||||||||||||||||||||||| ||||| ||||||    
T  49949404 gtggtggccgggattcgaacc-cagaccttgcatatattatgcattgtccttaccaactgagctaa 49949340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 56497598 - 56497663
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||| | ||| ||||||||||||||||||||||||| ||| | ||||||    
T  56497598 gtggtggccgggattcgaaccccagaccttgcatatattatgcattgtccttaccaattgagctaa 56497663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 29346299 - 29346363
Alignment:
Q  547 ggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| |||||||||||||  ||||||||| ||||||||||||  |||||||| ||||||    
T  29346299 ggtgtccggggttcgaacctcggatgttgcatatatttatgcattgtctctatcaactgagctaa 29346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 605
Target Start/End: Original strand, 47806246 - 47806306
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaa 605  Q
    ||||||| |||| |||||||| | ||| ||||||||||||||||||||||| | |||||||    
T  47806246 gtggtgttcggggttcgaaccccagaccttgcatatattatgcattgtcctcaccaactaa 47806306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 49308878 - 49308826
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| | ||| |||||||||||||||||||||||| |||||| ||||||    
T  49308878 ttcgaaccccagaccttgcatatattatgcattgtccttgtcaactgagctaa 49308826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 1701680 - 1701621
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgca-ttgtccttatcaact 603  Q
    |||||||| | | |||||||||||||| |||||||||||||||| || ||||||||||||    
T  1701680 gtggtgtctgaggttcgaacctcggaccttgcatatattatgcatttatccttatcaact 1701621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 610
Target Start/End: Original strand, 6789430 - 6789481
Alignment:
Q  559 tcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| ||||| ||||||||| ||||||||||||||| ||||| ||||||    
T  6789430 tcgaaccccggaccttgcatatactatgcattgtccttaccaactgagctaa 6789481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 608
Target Start/End: Complemental strand, 9783954 - 9783907
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    ||||||| ||| || ||||||||||||||||||| |||||||||||||    
T  9783954 gaacctcagaccttacatatattatgcattgtccatatcaactaagct 9783907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 17216119 - 17216182
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    |||||||| ||| ||||||| || ||| |||||||||||||||||| | |||||||||| ||||    
T  17216119 gtggtgtctggggttcgaacttcagaccttgcatatattatgcattattcttatcaactgagct 17216182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 608
Target Start/End: Original strand, 24785456 - 24785515
Alignment:
Q  549 tgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    |||||||| |||||||| | ||| ||| ||||||||||||||||||||| ||||| ||||    
T  24785456 tgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagct 24785515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 608
Target Start/End: Complemental strand, 24822810 - 24822751
Alignment:
Q  549 tgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    |||||||| |||||||| | ||| ||| ||||||||||||||||||||| ||||| ||||    
T  24822810 tgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagct 24822751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 38882792 - 38882741
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacattttt 251  Q
    |||||||||||||| |||| | ||| ||||| ||||||||||||||||||||    
T  38882792 ccggggttcgaactccggtcatgacgtccagcctaacaatttcgacattttt 38882741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 548 - 610
Target Start/End: Complemental strand, 6474507 - 6474445
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||| |||||||| | ||| |||| ||||| ||||||||||||| |||||| ||||||    
T  6474507 gtgtccggggttcgaaccccagaccttgcttatatgatgcattgtccttgtcaactgagctaa 6474445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 610
Target Start/End: Complemental strand, 13121608 - 13121550
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| || |||| || ||| |||||||||||||||||||||| || ||||||||||||    
T  13121608 ccggggtttgaacttcagaccttgcatatattatgcattgtccctaccaactaagctaa 13121550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 16612698 - 16612652
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgca-ttgtccttatcaact 603  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||    
T  16612698 ttcgaacctcggaccttgcatatattctgcatttgtccttatcaact 16612652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 19124617 - 19124670
Alignment:
Q  549 tgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||| |||||||| ||| |||||||||||||| |||||| |||||||||    
T  19124617 tgtccgggtt-cgaacctcagaccttgcatatattatgtattgtctttatcaact 19124670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 570 - 600
Target Start/End: Original strand, 19332316 - 19332346
Alignment:
Q  570 actttgcatatattatgcattgtccttatca 600  Q
    |||||||||||||||||||||||||||||||    
T  19332316 actttgcatatattatgcattgtccttatca 19332346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 553 - 615
Target Start/End: Complemental strand, 31352175 - 31352113
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||| ||||||||||| || |||||||| ||||||||||||| || ||||| |||||| ||||    
T  31352175 cgggattcgaacctcgtaccttgcatattttatgcattgtccataccaacttagctaagttca 31352113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 568 - 610
Target Start/End: Complemental strand, 34247488 - 34247446
Alignment:
Q  568 ggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||    
T  34247488 ggaccttgcatatattatgcattgtccttaccaactgagctaa 34247446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 34595926 - 34595984
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| ||| ||| |||| || ||||| |||||||||||||||||||||| |||||    
T  34595926 gtggtgtctggggttcaaaccccgaactttacatatattatgcattgtccttaccaact 34595984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 570 - 616
Target Start/End: Original strand, 39093590 - 39093636
Alignment:
Q  570 actttgcatatattatgcattgtccttatcaactaagctaatttcat 616  Q
    |||||||||||||||||||||||||||| ||| | |||||| |||||    
T  39093590 actttgcatatattatgcattgtccttaccaattgagctaaattcat 39093636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 43034332 - 43034390
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| || ||||||| ||| |||||||||||||||||||||| || |||||    
T  43034332 gtggtggccggggtttgaacctcagaccttgcatatattatgcattgtccataccaact 43034390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 49952663 - 49952717
Alignment:
Q  547 ggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaa 601  Q
    |||| ||||| || ||||| | ||| |||||||||||||||||||||||||||||    
T  49952663 ggtggccgggatttgaaccactgaccttgcatatattatgcattgtccttatcaa 49952717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 51298686 - 51298744
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||| ||| |||| || || |||||||||||||  ||||||||||||||||    
T  51298686 gtggtgtccgggattcaaaccccgaaccttgcatatattatatattgtccttatcaact 51298744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 836241 - 836290
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| ||||||||||| |||||||||| || ||||| ||||||    
T  836241 gaacctcggaccttgcatatattttgcattgtccctaccaactgagctaa 836290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 11269765 - 11269704
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    |||||||| ||| ||||||||   ||| |||||||||||||| |||||||||| ||||||||    
T  11269765 gtggtgtctggggttcgaacccaagaccttgcatatattatgtattgtccttaccaactaag 11269704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 11949769 - 11949818
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  11949769 gaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 11949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 610
Target Start/End: Original strand, 18915044 - 18915101
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||||| |||||  || ||||||||||||||||||||| ||||| ||||||    
T  18915044 cgggattcgaaccccggaccatgaatatattatgcattgtccttaccaactgagctaa 18915101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 20383543 - 20383494
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  20383543 gaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 20383494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 20799400 - 20799449
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  20799400 gaaccccggaccttgcatatattatgcattgtccctaccaactgagctaa 20799449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 22040693 - 22040656
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  22040693 ttgcatatattatgcattgtccatatcaactgagctaa 22040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 22279538 - 22279575
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  22279538 ttgcatatattatgcattgtccttaccaactgagctaa 22279575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 23304006 - 23304071
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||| ||| ||||| ||||||||||||||| |||||| || ||||| ||||||    
T  23304006 gtggtggccggggttcgcaccccggaccttgcatatattatgccttgtccctaccaactgagctaa 23304071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 610
Target Start/End: Original strand, 24664989 - 24665046
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||||| ||||| |||||||||||||||||| ||| || ||||| ||||||    
T  24664989 cggggttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaa 24665046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 27674379 - 27674342
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  27674379 ttgcatatattttgcattgtccttaccaactaagctaa 27674342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 35832061 - 35832126
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatatt-atgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| | |||||  ||| ||||||||||||| ||||||||||| |||||||| ||||||    
T  35832061 tggtgtccggggtacgaacaacgggctttgcatatatttatgcattgtccctatcaactgagctaa 35832126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 38416128 - 38416063
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||  ||| ||||||||||  || |||||||||||||||||| |||||| ||||| ||||||    
T  38416128 gtggtgtttgggattcgaacctcataccttgcatatattatgcattatccttaccaactgagctaa 38416063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Complemental strand, 44221505 - 44221460
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||| ||| |||||||||||||||||||||| || |||||    
T  44221505 ttcgaacctcagaccttgcatatattatgcattgtccataccaact 44221460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 609
Target Start/End: Original strand, 46434781 - 46434814
Alignment:
Q  576 catatattatgcattgtccttatcaactaagcta 609  Q
    |||||||||||||||||||||||||||| |||||    
T  46434781 catatattatgcattgtccttatcaactgagcta 46434814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 590
Target Start/End: Original strand, 54294412 - 54294457
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcatt 590  Q
    |||||||||||| || ||||| ||||| ||||||||||||||||||    
T  54294412 gtggtgtccggggtttgaaccccggaccttgcatatattatgcatt 54294457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 55061080 - 55061043
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| || ||||||||||||    
T  55061080 ttgcatatattatgcattgtccgtaccaactaagctaa 55061043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 5846099 - 5846035
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| || ||||| | ||||||||||||||||||||||||||||| ||||| ||||||    
T  5846099 tggtgtccggggtttgaaccccagactttgcatatattatgcattgtccttaccaactgagctaa 5846035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 615
Target Start/End: Complemental strand, 26377037 - 26376967
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||  |||||||| ||||| ||||||||| ||||||||||||||| ||||| |||||| ||||    
T  26377037 gtggtgtccggagttcgaaccccggacgttgcatataatatgcattgtccttaccaactgagctaagttca 26376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 35109471 - 35109413
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||| ||| |||||    
T  35109471 gtggtgtccgggattcgaacctcggaccttgcatatattatgtattgtctttaccaact 35109413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 28207203 - 28207138
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| |||||||||||||| |||||||| ||||||||||||| || ||||| ||||||    
T  28207203 gtggtggccgggattcgaacctcggaccttgcatattttatgcattgtccataccaactgagctaa 28207138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 18391658 - 18391606
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||| ||||||    
T  18391658 ttcgaacctcggaccttgcatattttatgcattgtccttaccaactgagctaa 18391606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 547 - 610
Target Start/End: Complemental strand, 11017245 - 11017182
Alignment:
Q  547 ggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| |||||||||| ||| |||||||||||||||||| ||| || ||||| ||||||    
T  11017245 ggtgtccgggattcgaacctcagaccttgcatatattatgcattatccctaccaactgagctaa 11017182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 561 - 603
Target Start/End: Complemental strand, 40446038 - 40445996
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  40446038 gaacctcagaccttgcatatattatgcattgtccttatcaact 40445996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 3445237 - 3445302
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  3445237 gtggtggccgggatttgaaccccggaccttgcatacattatgcattgtccttaccaactgagctaa 3445302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 6624847 - 6624798
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  6624847 gtggtggccggggttcgaaccccggaccttgcatatattatgcattgtcc 6624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 8544992 - 8545037
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||  ||||| |||||||||||||||||||||||||||||||    
T  8544992 ttcgaactccggaccttgcatatattatgcattgtccttatcaact 8545037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 19783626 - 19783686
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    ||||||||||| || ||||| |||||| |||||||||||||| |||||| ||||||||||||    
T  19783626 gtggtgtccggatt-cgaacatcggaccttgcatatattatgtattgtctttatcaactaag 19783686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 22499011 - 22498955
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||| |||||||| | ||| ||||||||||||||||||||||||| |||||    
T  22499011 tggtgtccggggttcgaacc-cagaccttgcatatattatgcattgtccttaccaact 22498955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 37932401 - 37932336
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| || || |||||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  37932401 gtggtggccagggttcgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 37932336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 40056589 - 40056638
Alignment:
Q  554 gggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| |||||| |||| ||||||||||||||||||||||||| |||||    
T  40056589 gggttttgaacctgggacattgcatatattatgcattgtccttaccaact 40056638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 40715939 - 40716004
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| |||||||||||||||||||||| |||||| | ||||||    
T  40715939 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccatatcaattgagctaa 40716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 43354515 - 43354450
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| ||||||  |||||||| ||||||    
T  43354515 tggtgtccggggttcgaaccccggactttgcatatatttatgtattgtctctatcaactgagctaa 43354450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 562 - 610
Target Start/End: Original strand, 16133072 - 16133120
Alignment:
Q  562 aacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||| ||||||||||||||||||||||||| ||||| ||||||    
T  16133072 aacctctgaccttgcatatattatgcattgtccttaccaactgagctaa 16133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 574 - 610
Target Start/End: Complemental strand, 18147760 - 18147724
Alignment:
Q  574 tgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||||||||||| ||||||    
T  18147760 tgcatatattatgcattgtccttatcaactgagctaa 18147724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 597
Target Start/End: Complemental strand, 22902030 - 22901978
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    ||||||||| || |||||| | || ||||||||||||||||||||||||||||    
T  22902030 gtggtgtcctgggttcgaatcccgaactttgcatatattatgcattgtcctta 22901978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 25603991 - 25604055
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||| || || |||||||||||||||| ||||| |||||||| ||||||    
T  25603991 tggtggccgggattcgaaccccgaaccttgcatatattatgcactgtccatatcaactgagctaa 25604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 2530082 - 2530015
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaat 611  Q
    |||||||||||| |||||||||  ||| ||||||||| ||||||||||||  |||||||| |||||||    
T  2530082 gtggtgtccggggttcgaacctgcgaccttgcatatatttatgcattgtctatatcaactgagctaat 2530015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 610
Target Start/End: Complemental strand, 20074621 - 20074558
Alignment:
Q  547 ggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| |||||| ||||||| || |||||||||||||||||| |||  |||| ||||||    
T  20074621 ggtgtccggggttcgaaactcggacattacatatattatgcattgtcattacaaactgagctaa 20074558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 605
Target Start/End: Original strand, 25607061 - 25607108
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaa 605  Q
    |||||||| | ||| ||||||||||||||||||||| |||||||||||    
T  25607061 ttcgaaccccagaccttgcatatattatgcattgtctttatcaactaa 25607108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 608
Target Start/End: Complemental strand, 26655535 - 26655472
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    |||||| ||||| |||||||| ||||| || ||||||||||||||||||| || ||||| ||||    
T  26655535 gtggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26655472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 608
Target Start/End: Complemental strand, 26927120 - 26927057
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    |||||| ||||| |||||||| ||||| || ||||||||||||||||||| || ||||| ||||    
T  26927120 gtggtggccggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagct 26927057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 592
Target Start/End: Complemental strand, 32339806 - 32339759
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgt 592  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||||    
T  32339806 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgt 32339759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 597
Target Start/End: Complemental strand, 32806417 - 32806378
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  32806417 ttcgaacttcggaccttgcatatattatgcattgtcctta 32806378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 608
Target Start/End: Complemental strand, 35413027 - 35412965
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    |||||| ||||| |||||||| ||||| |||||||||||||||||||||| ||| |||| ||||    
T  35413027 gtggtggccggggttcgaacc-cggaccttgcatatattatgcattgtccatattaactgagct 35412965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 601
Target Start/End: Complemental strand, 43406750 - 43406695
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaa 601  Q
    ||||||| ||| |||| ||||||||||||||||||||||||| |||| | ||||||    
T  43406750 tggtgtctggggttcgtacctcggactttgcatatattatgcgttgttcctatcaa 43406695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 569 - 615
Target Start/End: Original strand, 1669594 - 1669640
Alignment:
Q  569 gactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||||||||||||||| |||| ||||| |||||| ||||    
T  1669594 gactttgcatatattatgcattgttcttaccaactgagctaagttca 1669640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 548 - 606
Target Start/End: Complemental strand, 6898089 - 6898031
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaag 606  Q
    ||||| |||||| ||| ||| |||||||||||||||||||||| || ||| ||||||||    
T  6898089 gtgtcagggttttgaagctcagactttgcatatattatgcattatctttaccaactaag 6898031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 615
Target Start/End: Original strand, 7861019 - 7861061
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||    
T  7861019 ttgcatatattatgcattgtccctatcaactaagataaattca 7861061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 573 - 615
Target Start/End: Original strand, 11844456 - 11844498
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||    
T  11844456 ttgcatatattatgcattgtccttaccaactgagctaagttca 11844498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 16531265 - 16531323
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||  |||||||   |||| ||||||||||||||||||||||||| |||||    
T  16531265 gtggtgtccggaattcgaactatggaccttgcatatattatgcattgtccttaccaact 16531323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 34702561 - 34702503
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| || || |||||||| ||||| || |||||||||||||||||||||| |||||    
T  34702561 gtggtggccaggattcgaaccccggacctttcatatattatgcattgtccttaccaact 34702503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 40199158 - 40199208
Alignment:
Q  200 ccggggttcgaacttcggttacgacatccagtctaacaatttcgacatttt 250  Q
    ||||||||||||||||| | | ||||||||| |||||||||||| ||||||    
T  40199158 ccggggttcgaacttcgatcatgacatccagcctaacaatttcggcatttt 40199208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 40541151 - 40541101
Alignment:
Q  561 gaacctcggactttgcatatattatgcattg-tccttatcaactaagctaa 610  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||| ||||||    
T  40541151 gaaccccggactttgcatatattatgcattgttccttaccaactgagctaa 40541101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 42168935 - 42168993
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| ||| |||||||| | ||| ||||||||| ||||||||||||||| |||||    
T  42168935 gtggtgtctggggttcgaaccccagaccttgcatatactatgcattgtccttaccaact 42168993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 602
Target Start/End: Complemental strand, 3222802 - 3222745
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaac 602  Q
    ||||| |||||| |||||||||| ||| |||||||||||||| |||||| ||| ||||    
T  3222802 gtggtatccggggttcgaacctcagaccttgcatatattatgtattgtctttaccaac 3222745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 3671288 - 3671231
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||| |||||| ||||||||  |||| ||||||||||||| |||| ||||||||||||    
T  3671288 tggtatccggggttcgaaccctggaccttgcatatattatacattatccttatcaact 3671231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 603
Target Start/End: Complemental strand, 4432166 - 4432129
Alignment:
Q  566 tcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| || ||||||||||||||||||||||||||||    
T  4432166 tcggaccttacatatattatgcattgtccttatcaact 4432129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 590
Target Start/End: Original strand, 5107243 - 5107280
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcatt 590  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  5107243 cggggttcgaacctcggaccttgcatatattatgcatt 5107280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 5485241 - 5485192
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| || ||||| ||||||    
T  5485241 gaaccccggacattgcatatattatgcattgtccctaccaactgagctaa 5485192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 6489078 - 6489013
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| | ||| |||||||||||||||||||||| || ||||| ||||||    
T  6489078 gtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaa 6489013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 570 - 603
Target Start/End: Original strand, 12672256 - 12672289
Alignment:
Q  570 actttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||||||||||||| ||||||||||||    
T  12672256 actttgcatatattatgcattatccttatcaact 12672289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 22394090 - 22394041
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||  || ||||||||||||||||||| |||||||| ||||||    
T  22394090 gaacctcggatcttacatatattatgcattgtccatatcaactgagctaa 22394041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Original strand, 22522791 - 22522840
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| || ||||| ||||| ||||||||||||||||||||||    
T  22522791 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 22522840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 24485742 - 24485705
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| || ||||||||||||    
T  24485742 ttgcatatattatgcattgtccataccaactaagctaa 24485705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Complemental strand, 25709787 - 25709746
Alignment:
Q  562 aacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||| ||||||||||||||||||||  |||||||||    
T  25709787 aacctcggaccttgcatatattatgcattgtttttatcaact 25709746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 610
Target Start/End: Complemental strand, 26409316 - 26409259
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||||| ||||| || ||||||||||||||||||| || ||||| ||||||    
T  26409316 cggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaa 26409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 27679569 - 27679504
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| || ||||| || || |||||||||||||||||| || ||| ||||| ||||||    
T  27679569 gtggtgtccgggatttgaaccccgaaccttgcatatattatgcattatctttaccaactgagctaa 27679504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 28604408 - 28604473
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| | |||||||| ||||| || ||| |||||||||||||| ||| ||||| ||||||    
T  28604408 gtggtgtccgtgattcgaaccccggaccttacatttattatgcattgtctttaccaactgagctaa 28604473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 32200453 - 32200502
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| |||||||||||||||||||||| | |||||| ||||||    
T  32200453 gaaccccggaccttgcatatattatgcattgtccctgtcaactgagctaa 32200502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 610
Target Start/End: Complemental strand, 33928984 - 33928919
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatata-ttatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||| |||||||| ||||||| ||||||| ||||| ||||| ||||||| || ||||||    
T  33928984 tggtgtccggggttcgaaccccggacttggcatatatttatgaattgttcttatcatctgagctaa 33928919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 36321512 - 36321549
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  36321512 ttgcatatattatgcattgtccttaccaactgagctaa 36321549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 39610359 - 39610396
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  39610359 ttgcatatattatgcattgtccatatcaactgagctaa 39610396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 545 - 608
Target Start/End: Complemental strand, 75396 - 75333
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagct 608  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||||||||| ||||| ||||    
T  75396 gtggtggccgggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagct 75333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 545 - 592
Target Start/End: Original strand, 12700987 - 12701034
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgt 592  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||    
T  12700987 gtggtgtccggagttcgaacctcggactttgcatatattatgcattgt 12701034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 615
Target Start/End: Original strand, 1244695 - 1244765
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||| |||||||| | ||| ||| ||||||||||||||||||||| ||||| |||||| ||||    
T  1244695 gtggtgtccggggttcgaaccccagaccttgtatatattatgcattgtccttaccaactgagctaagttca 1244765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 615
Target Start/End: Original strand, 42208475 - 42208529
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||    
T  42208475 gaacctcggaccttgcatatattatgcattgtccttaccaactgagctaaattca 42208529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 6314313 - 6314378
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| ||||||  |||||| |||||||| |||||||||||||||||||||| ||||||    
T  6314313 gtggtggccggggttcgaatttcggaccttgcatattttatgcattgtccttatcaactgagctaa 6314378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 19778136 - 19778071
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||  || |||||||| ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  19778136 gtggtgtctaggattcgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaa 19778071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 42367800 - 42367735
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||| || |||||||  |||||||| ||||||||||||||||| |||||||||| ||||||    
T  42367800 gtggtgtccagggttcgaactccggacttttcatatattatgcattgttcttatcaactgagctaa 42367735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 9656000 - 9656052
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||| ||||||    
T  9656000 ttcgaacctcggaccttgcatattttatgcattgtccttaccaactgagctaa 9656052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 610
Target Start/End: Original strand, 37749990 - 37750054
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| ||||| ||| |||| |||||||||||||||||||||||||| | |||||||| ||||||    
T  37749990 tggtggccggggttcaaaccccggactttgcatatattatgcattgttcatatcaactgagctaa 37750054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 559 - 610
Target Start/End: Complemental strand, 13477957 - 13477906
Alignment:
Q  559 tcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| || ||||||||||||||||||||||||| ||||| ||||||    
T  13477957 tcgaacctcgaacattgcatatattatgcattgtccttaccaactcagctaa 13477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 568 - 615
Target Start/End: Complemental strand, 15299667 - 15299620
Alignment:
Q  568 ggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||    
T  15299667 ggactttgcatatattatgcattgtcctcaccaactaagctaaattca 15299620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 568 - 615
Target Start/End: Complemental strand, 15480036 - 15479989
Alignment:
Q  568 ggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||    
T  15480036 ggactttgcatatattatgcattgtcctcaccaactaagctaaattca 15479989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 610
Target Start/End: Complemental strand, 30623361 - 30623299
Alignment:
Q  548 gtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||| |||||||| | ||| ||||||||||||||||||||||||| ||||| ||||||    
T  30623361 gtgttcggggttcgaaccccagaccttgcatatattatgcattgtccttaccaactgagctaa 30623299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 19260569 - 19260634
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| || ||||||||||||||||| | |||||||||||||||    
T  19260569 gtggtggccggggtttgaaccccggaccttacatatattatgcattgtacatatcaactaagctaa 19260634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 27587292 - 27587227
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| || ||||| ||||| |||||||||| |||||||||||||| ||||| ||||||    
T  27587292 gtggtggccggggtttgaaccccggaccttgcatatatcatgcattgtccttaccaactgagctaa 27587227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 594
Target Start/End: Original strand, 31832080 - 31832129
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||||||||| |||||| | ||||| ||||||||||||||||||||||    
T  31832080 gtggtgtccggggttcgaaacccggacattgcatatattatgcattgtcc 31832129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 610
Target Start/End: Complemental strand, 32192957 - 32192900
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||||| || || |||||||||||||||||||||| || ||||||||||||    
T  32192957 cggggttcgaaccccgaaccttgcatatattatgcattgtccataccaactaagctaa 32192900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 32555325 - 32555260
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| ||||||||| | || |||||||| ||||||||||||| || ||||||||||||    
T  32555325 gtggtgaccggggttcgaaccttgaaccttgcatattttatgcattgtccataccaactaagctaa 32555260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 37938550 - 37938501
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||||||||||| ||| || ||||| ||||||    
T  37938550 gaacctcggactttgcatatattatgcattatccataccaactgagctaa 37938501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 615
Target Start/End: Complemental strand, 44019607 - 44019550
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaatttca 615  Q
    ||||||| |||||| |||||||||||||||||||| |||| ||||| |||||| ||||    
T  44019607 ttcgaacttcggaccttgcatatattatgcattgttcttaccaactgagctaagttca 44019550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 601
Target Start/End: Original strand, 16843513 - 16843569
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaa 601  Q
    ||||||||| || |||||||| || || ||||||||||||| |||||||||||||||    
T  16843513 gtggtgtccagggttcgaaccacgaaccttgcatatattatacattgtccttatcaa 16843569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 609
Target Start/End: Complemental strand, 19488371 - 19488307
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    |||||||||||| ||||| || | ||| ||| ||||||||||||||||||||| ||||| |||||    
T  19488371 gtggtgtccgggattcgagccccagaccttgtatatattatgcattgtccttaccaactgagcta 19488307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 27750907 - 27750959
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||||| |||||||||||||||| |||||||| ||||| ||||||    
T  27750907 ttcgaaccccggaccttgcatatattatgcactgtccttaccaactgagctaa 27750959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 38282842 - 38282894
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||| ||| ||||| ||||||||||||||| ||||| ||||||    
T  38282842 ttcgaacctcggaccttgtatatactatgcattgtccttaccaactgagctaa 38282894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 597
Target Start/End: Complemental strand, 44975249 - 44975197
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    ||||||||||||||||||| | || || |||||||||||||||||||| ||||    
T  44975249 gtggtgtccgggtttcgaatcccgaaccttgcatatattatgcattgttctta 44975197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 610
Target Start/End: Complemental strand, 2060580 - 2060541
Alignment:
Q  571 ctttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  2060580 ctttgcatatattatgcattgttcttatcaactgagctaa 2060541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 609
Target Start/End: Complemental strand, 9071016 - 9070965
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    |||||||||||||| || |||||||||| ||||||||||| ||||| |||||    
T  9071016 ttcgaacctcggaccttacatatattatacattgtccttaccaactgagcta 9070965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 610
Target Start/End: Original strand, 25890402 - 25890465
Alignment:
Q  547 ggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||| |||||||| ||| | ||||||| |||||||| ||||| || ||||||||||||    
T  25890402 ggtgtccggggttcgaaccccggcccttgcataaattatgcaatgtccctaccaactaagctaa 25890465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 610
Target Start/End: Original strand, 27718906 - 27718949
Alignment:
Q  567 cggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| |||||||||||||||||||||| |||||||| ||||||    
T  27718906 cggaccttgcatatattatgcattgtccatatcaactgagctaa 27718949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 609
Target Start/End: Complemental strand, 36781462 - 36781415
Alignment:
Q  562 aacctcggactttgcatatattatgcattgtccttatcaactaagcta 609  Q
    |||| |||||||||||||||||||| |||||||||| ||||| |||||    
T  36781462 aaccccggactttgcatatattatgtattgtccttaccaactgagcta 36781415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 603
Target Start/End: Complemental strand, 4263870 - 4263828
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||    
T  4263870 gaacctcggaccttgcatacattatgcattgttcttatcaact 4263828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 7553750 - 7553692
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||||||  || |||||| |||| |||||||||||||||||||||| || |||||    
T  7553750 gtggtgtccggagtttgaaccttggaccttgcatatattatgcattgtccctaccaact 7553692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 603
Target Start/End: Original strand, 8442493 - 8442535
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||| ||| ||||||||||||||||||||||||| |||||    
T  8442493 gaacctcagaccttgcatatattatgcattgtccttaccaact 8442535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 570 - 604
Target Start/End: Original strand, 10256328 - 10256362
Alignment:
Q  570 actttgcatatattatgcattgtccttatcaacta 604  Q
    |||||| ||||||||||||||||||||||||||||    
T  10256328 actttgtatatattatgcattgtccttatcaacta 10256362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 12748972 - 12748914
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||||| || ||||| ||||| |||||||||||||||||||||| || |||||    
T  12748972 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 12748914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 568 - 610
Target Start/End: Complemental strand, 29652266 - 29652224
Alignment:
Q  568 ggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||||||||||||||||| |||||||||| ||||||    
T  29652266 ggaccttgcatatattatgcattgttcttatcaactgagctaa 29652224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 568 - 610
Target Start/End: Original strand, 33482162 - 33482204
Alignment:
Q  568 ggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| ||||||| |||||||||||||| |||||||||||||||    
T  33482162 ggaccttgcataaattatgcattgtccctatcaactaagctaa 33482204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 35102657 - 35102715
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||| ||| | |||||||||||||  ||||||||||||||||||| ||||| |||||    
T  35102657 gtggtgcccgaggttcgaacctcggatcttgcatatattatgcattgaccttaccaact 35102715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 595
Target Start/End: Complemental strand, 45396635 - 45396585
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcct 595  Q
    |||||| ||||| ||||||| || ||| |||||||||||||||||||||||    
T  45396635 gtggtggccgggattcgaacttcagaccttgcatatattatgcattgtcct 45396585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 444484 - 444419
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||||| ||  |||| ||||| ||||||||||||||||||||||||| ||| | ||||||    
T  444484 gtggtggccggggtttaaaccccggaccttgcatatattatgcattgtccttaccaattgagctaa 444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 603
Target Start/End: Complemental strand, 9067152 - 9067095
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||||| |||||||||| ||  ||||||| |||||||||| |||||| |||||    
T  9067152 tggtgtccgggattcgaacctcagatcttgcataaattatgcattatccttaccaact 9067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 11709041 - 11708992
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| |||||| |||||||||||||||||||||| || ||||| ||||||    
T  11709041 gaacttcggaccttgcatatattatgcattgtccctaccaactgagctaa 11708992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 610
Target Start/End: Complemental strand, 11759072 - 11759031
Alignment:
Q  569 gactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||| |||| |||||||||||| ||||||    
T  11759072 gactttgcatatattatacattatccttatcaactgagctaa 11759031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 13575360 - 13575295
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| ||| | |||||||||||||  |||||||| ||||||||||||| || ||||| ||||||    
T  13575360 gtggtggccgaggttcgaacctcggaacttgcatatgttatgcattgtccctaccaactgagctaa 13575295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Complemental strand, 17704056 - 17704019
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  17704056 ttgcatatattatgcattgtccttaccaactgagctaa 17704019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 594
Target Start/End: Complemental strand, 21557496 - 21557455
Alignment:
Q  553 cgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||| |||||||||||||| || |||||||||||||||||||    
T  21557496 cgggattcgaacctcggaccttacatatattatgcattgtcc 21557455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 603
Target Start/End: Original strand, 22948088 - 22948129
Alignment:
Q  562 aacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||| ||||| |||||||||||||||||||||| ||||||||    
T  22948088 aaccccggaccttgcatatattatgcattgtccctatcaact 22948129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 610
Target Start/End: Original strand, 26773820 - 26773857
Alignment:
Q  573 ttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  26773820 ttgcatatattatgcatcgtccttattaactaagctaa 26773857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Original strand, 32051522 - 32051571
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||| ||||| || ||||| ||||| ||||||||||||||||||||||    
T  32051522 gtggtggccggggtttgaaccccggaccttgcatatattatgcattgtcc 32051571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 43962014 - 43962079
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||| ||| ||| ||  |||||| |||||||||||||| |||||||||| ||||| ||||||    
T  43962014 gtggtgtcgggggttcaaatttcggaccttgcatatattatgtattgtccttaccaactgagctaa 43962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 53767 - 53832
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||||||||| |||||||| ||||| |||||| ||||||||| |||||||| ||||| ||||||    
T  53767 gtggtgtccgggattcgaaccccggaccttgcatgtattatgcactgtccttaccaactgagctaa 53832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 567 - 610
Target Start/End: Complemental strand, 239856 - 239813
Alignment:
Q  567 cggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||    
T  239856 cggactttgcatatattatgcattgtccttaccaactgagctaa 239813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Complemental strand, 25460 - 25402
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    |||||||| ||| ||||||||  |||| ||||||||||||||||||||||||| |||||    
T  25460 gtggtgtctggggttcgaaccctggaccttgcatatattatgcattgtccttaccaact 25402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 545 - 597
Target Start/End: Original strand, 3339 - 3391
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    |||||||||||| |||||| ||||||| || ||| ||||||||||||||||||    
T  3339 gtggtgtccggggttcgaatctcggaccttacatctattatgcattgtcctta 3391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 558 - 598
Target Start/End: Complemental strand, 16209 - 16169
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttat 598  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  16209 ttcgaacctcgaactttacatatattatgcattgtccttat 16169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 597
Target Start/End: Complemental strand, 48717 - 48666
Alignment:
Q  546 tggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcctta 597  Q
    ||||||||||| || ||| | |||||||||||||||||||||||||| ||||    
T  48717 tggtgtccggggtttgaatcccggactttgcatatattatgcattgttctta 48666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 610
Target Start/End: Complemental strand, 22975 - 22917
Alignment:
Q  552 ccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||| || ||||||||||| |||||||| ||||||||||| | |||||||||| ||||    
T  22975 ccggggtttgaacctcggaccttgcatattttatgcattgttcatatcaactaaactaa 22917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 568 - 610
Target Start/End: Complemental strand, 4514 - 4472
Alignment:
Q  568 ggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||| ||||||| |||||||||||||| |||||||||||||||    
T  4514 ggaccttgcataaattatgcattgtccctatcaactaagctaa 4472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 561 - 603
Target Start/End: Original strand, 31928 - 31970
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||    
T  31928 gaaccccggaccttgcatatattatgcattgtccctatcaact 31970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1694 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1694
Description:

Target: scaffold1694; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 210 - 161
Alignment:
Q  561 gaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    ||||||| ||| ||||||| |||||||||||||| |||||||| ||||||    
T  210 gaacctcagaccttgcatacattatgcattgtccatatcaactgagctaa 161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 610
Target Start/End: Complemental strand, 1599 - 1534
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtccttatcaactaagctaa 610  Q
    |||||| | ||| |||||||| ||||| |||||||| ||||||||||||| || ||||| ||||||    
T  1599 gtggtggcgggggttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaa 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 34891 - 34936
Alignment:
Q  558 ttcgaacctcggactttgcatatattatgcattgtccttatcaact 603  Q
    ||||||||  |||| ||||||||||||||||||||||||| |||||    
T  34891 ttcgaaccctggaccttgcatatattatgcattgtccttaccaact 34936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 594
Target Start/End: Complemental strand, 17575 - 17526
Alignment:
Q  545 gtggtgtccgggtttcgaacctcggactttgcatatattatgcattgtcc 594  Q
    |||||||||||| |||||||| |  || ||||||||||||||||||||||    
T  17575 gtggtgtccgggattcgaaccccaaaccttgcatatattatgcattgtcc 17526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University