View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3096-Insertion-7 (Length: 797)

Name: NF3096-Insertion-7
Description: NF3096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3096-Insertion-7
NF3096-Insertion-7
[»] chr8 (10 HSPs)
chr8 (12-791)||(15799517-15800295)
chr8 (242-781)||(15812913-15813448)
chr8 (258-769)||(15805084-15805582)
chr8 (182-767)||(15764105-15764677)
chr8 (272-767)||(15697033-15697529)
chr8 (272-786)||(15722235-15722739)
chr8 (271-781)||(15703408-15703907)
chr8 (294-768)||(15711703-15712175)
chr8 (346-466)||(15692659-15692779)
chr8 (605-768)||(15692362-15692525)
[»] chr3 (12 HSPs)
chr3 (272-523)||(3080333-3080584)
chr3 (293-523)||(3094791-3095021)
chr3 (293-471)||(4547999-4548177)
chr3 (607-718)||(3080669-3080780)
chr3 (607-718)||(3095106-3095217)
chr3 (607-768)||(4547688-4547849)
chr3 (345-465)||(3102380-3102500)
chr3 (351-465)||(3122514-3122628)
chr3 (607-684)||(3123011-3123088)
chr3 (607-684)||(3103480-3103557)
chr3 (607-684)||(3132760-3132839)
chr3 (418-456)||(1077386-1077424)
[»] chr4 (11 HSPs)
chr4 (384-465)||(36370555-36370636)
chr4 (384-445)||(36399760-36399821)
chr4 (384-465)||(36435825-36435906)
chr4 (379-465)||(31717667-31717753)
chr4 (424-465)||(31702382-31702423)
chr4 (424-465)||(31724937-31724978)
chr4 (384-465)||(36376327-36376408)
chr4 (384-465)||(36407217-36407298)
chr4 (384-465)||(36412340-36412421)
chr4 (376-465)||(36419371-36419460)
chr4 (384-465)||(36429372-36429453)
[»] chr2 (4 HSPs)
chr2 (367-459)||(2662477-2662569)
chr2 (378-448)||(2672478-2672548)
chr2 (607-677)||(2704312-2704382)
chr2 (610-695)||(2672715-2672800)
[»] chr5 (1 HSPs)
chr5 (421-459)||(470063-470101)
[»] chr1 (1 HSPs)
chr1 (367-465)||(21917939-21918037)


Alignment Details
Target: chr8 (Bit Score: 730; Significance: 0; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 730; E-Value: 0
Query Start/End: Original strand, 12 - 791
Target Start/End: Complemental strand, 15800295 - 15799517
Alignment:
Q  12 ctttcaccttttcagtatgcgttaaacaaaccttattctccccatttactttaatcatcatattcttttacttgctccaatttagttctagttaataaaa 111  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15800295 ctttcaccttttcagtatgc-ttaaacaaaccttattctccccatttaatttaatcatcatattcttttacttgctccaatttagttctagttaataaaa 15800197  T
Q  112 gacgatttggagtctgggattatatacaaaatttgaaaagaaagaaaacgaataatcccttgatttttactgtaaaacaactatgaaggaaaaagttaat 211  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15800196 aacgatttggagtttgggattatatacaaaatttgaaaagaaagaaaacgaataatcccttgatttttactgtaaaacaactatgaaggaaaaagttaat 15800097  T
Q  212 gatagtttctgttagtgttgttgtcatcattaacacgaatatgatgttcctcaacgtgacagatgaggaaaaacataagcatctagattggaaattacga 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15800096 gatagtttctgttagtgttgttgtcatcattaacacgaatatgatgttcctctacgtgacagatgaggaaaaacataagcatctagattggaaattacga 15799997  T
Q  312 ctaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttc 411  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15799996 ctaagcattatcaatggaattgcaagaggattgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttc 15799897  T
Q  412 tggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaagaccaatgtcagacaaaarcaaagagagtttttggcaccta 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  15799896 tggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaagaccaatgtcagacaaaaacaaaaagagtttttggcaccta 15799797  T
Q  512 gtatgtgttattattggacactattttcaaacaaatagtagaaaatttcacatgatttttcacaactgatggtgttctgttgattttatatatatagtgg 611  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15799796 gtatgtgttattattggacactattttcaaacaaatagtagaaaatttcacatgatttttcacaactgatggtgttctgttgattttatatatatagtgg 15799697  T
Q  612 atacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaataatttacggaaaaaga 711  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15799696 atacatggctcctgaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaataatatacggaaaaaga 15799597  T
Q  712 aatggtgacttctttctttcagaacatatgcaaagtcttctactatatgtgagttttccttatcacatctaatcagcaaa 791  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15799596 aatggcgacttctttctttcagaacatatgcaaagtcttctactatatgtgagttttccttatcacatctaatcaacaaa 15799517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 242 - 781
Target Start/End: Complemental strand, 15813448 - 15812913
Alignment:
Q  242 taacacgaatatgatgttcctcaacgtgacagatgaggaaaaacataagcatctagattggaaattacgactaagcattaccaatggaattgcaagagga 341  Q
    ||||| ||||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||||||    
T  15813448 taacatgaatacgatgttcctcaacttggcagatgaagaaaaacataagcatctagattggaaactacgactaagcattatcaaaggaatcgcaagagga 15813349  T
Q  342 ttgctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcag 441  Q
     | |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  15813348 cttctataccttcatgaggattctccacttagagtaatccacagagatctgaaagcgagcaatgttcttctggatgatgaaatgaatccaaaaatatctg 15813249  T
Q  442 attttggattggcaagaacatttgataaagaccaatgtcagacaaaarcaaagagagtttttggcacctagtatgtgttattattggacactattttcaa 541  Q
    |||||||||| |||||  ||||||| ||||| |||||||| |||||  |||| |||||| ||||||||||||| | |   |||||| | ||| |||| ||    
T  15813248 attttggattagcaagggcatttgaaaaagatcaatgtcatacaaagacaaaaagagttattggcacctagtacggg---ttattgaaaactcttttaaa 15813152  T
Q  542 acaaata--gtagaaaatttcacatgatttttcacaactgatggtgttctgttgattttatatatatagtggatacatggctccagaatacgctatggct 639  Q
    |||||||   ||||||| || ||||||   |||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15813151 acaaatatgttagaaaaatttacatga---ttcacaactgacattgttctcttgattttatatatatagtggatacatggctccagaatacgctatggct 15813055  T
Q  640 gggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaataatttacggaaaaagaaatggtgacttctttctttcagaacata 739  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  15813054 gggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagagataatttatggaaaaagaaatggagacttctttctttcagaacata 15812955  T
Q  740 tgcaaagtcttctactatatgtgagttttccttatcacatct 781  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  15812954 tgcaaagtcttctattatatgtaagttttccttatcacatct 15812913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 258 - 769
Target Start/End: Complemental strand, 15805582 - 15805084
Alignment:
Q  258 ttcctcaacgtgacagatgaggaaaaacataagcatctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatg 357  Q
    |||||| || |||||||| ||||||| ||||||||  ||||||||| |||||||| |||||||| |||||||||||||| |||| |||||||||||||||    
T  15805582 ttcctctacttgacagataaggaaaagcataagcacatagattggagattacgacgaagcattatcaatggaattgcaaaaggactgctataccttcatg 15805483  T
Q  358 aggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaag 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15805482 aggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttggattagcaag 15805383  T
Q  458 aacatttgataaagaccaatgtcagacaaaarcaaagagagtttttggcacctagtatgtgttattattggacactattttcaaa-caaatagtagaaaa 556  Q
     | |||||| ||||| ||||| | ||||||| || | |||||||||||||||||||| |    ||||||||| | | |||||||| |||||| || |||     
T  15805382 gagatttgaaaaagatcaatgcccgacaaaaacagaaagagtttttggcacctagtaag---cattattggaaagt-ttttcaaagcaaatattataaat 15805287  T
Q  557 tttcacatgatttttcacaactgatggtgttctgttgattttatatatatagtggatacatggctccagaatacgctatggctgggttattttcagtgaa 656  Q
    ||||||||||   |||||||||||  || ||   || ||||    |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  15805286 tttcacatga---ttcacaactgacagtatt---ttaattt----tatacagtggatacatggctccagaatatgctatggctggcttattttcagtgaa 15805197  T
Q  657 atccgatgttttcagctttggagttcttgtgttagaaataatttacggaaaaagaaatggtgacttctttctttcagaacatatgcaaagtcttctacta 756  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||||||||| |||||||||||||||||| ||    
T  15805196 atccgatgtttttagctttggagttcttgtattagaaattatttacggaaaaagaaatggcgaattctttctttcagagcatatgcaaagtcttctatta 15805097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 182 - 767
Target Start/End: Complemental strand, 15764677 - 15764105
Alignment:
Q  182 tgtaaaacaactatgaaggaaaaagttaatgatagtttctgttagtgttgttgtcatcattaacacgaatatgatgttcctcaacgtgacagatgaggaa 281  Q
    ||||||||| ||||| || | ||||| ||||||||| ||| ||| ||  | | | |||| ||||| ||| |  |||||||||  | |||||||| |||||    
T  15764677 tgtaaaacagctatgtagaataaagtgaatgatagtctctattactgcagctattatcaataacatgaaaacaatgttcctctgcttgacagataaggaa 15764578  T
Q  282 aaacataagcatctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgacttagagtaatcc 381  Q
    || ||||||||||||||||||| ||||||||||||||||  || ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  15764577 aagcataagcatctagattggagattacgactaagcattgtcactggaattgcaaaaggactgctataccttcatgaggattctcgacttagagtaatcc 15764478  T
Q  382 acagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaagaccaatgtca 481  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||| |||||||     
T  15764477 acagggatctgaaagctagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttgggttagcaaggacatttgaaaaagatcaatgtcc 15764378  T
Q  482 gacaaaarcaaagagagtttttggcacctagtatgtgttattattggacactattttcaaacaaatagtagaaaatttcacatgatttttcacaactgat 581  Q
     | |||| |||| |||||| | || |||||||| | ||||   ||| | ||| |||| ||||  |||  |||| |||||||||||   ||||||| |||     
T  15764377 aagaaaaacaaatagagttatcggaacctagtaagcgtta--gttgca-act-ttttaaaac--atatcagaagatttcacatga---ttcacaattgaa 15764287  T
Q  582 ggtgttctgttgattttatatatatagtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagtt 681  Q
      |||||| |||| ||    | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  15764286 aatgttctattgactt----tttatagtggatacatggctccagaatatgctatggctgggttattttcggtgaaatccgatgttttcagttttggagtt 15764191  T
Q  682 cttgtgttagaaataatttacggaaaaagaaatggtgacttctttctttcagaacatatgcaaagtcttctactatatgtgagttt 767  Q
    ||| | ||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  15764190 cttatattagaaatagtgtatggaaaaagaaatggagaattctttctttcagaacatatgcaaagtcttctattatatgtaagttt 15764105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 272 - 767
Target Start/End: Complemental strand, 15697529 - 15697033
Alignment:
Q  272 agatgaggaaaaacataagcatctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgactt 371  Q
    |||||| ||| | |||||| | |||||||||| |||||||||||| |||| ||||||||| ||||||||| |  ||||||||||  | ||||||||||||    
T  15697529 agatgaagaacagcataagaaactagattggacattacgactaagtattatcaatggaatcgcaagaggacttttataccttcaccaagattctcgactt 15697430  T
Q  372 agagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaag 471  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||| ||||    
T  15697429 agagttatccatagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccgaaaatatcagattttggattagcaaggaaatttgaaaaag 15697330  T
Q  472 accaatgtcagacaaaarcaaagagagtttttggcacctagtatgtgttattattgg--acactattttcaaacaaatagtagaaaatttcacatgattt 569  Q
      ||| ||||||||||| |||| |||||| ||||||||||||| ||||  |||||||  || ||||||||||||||||| ||||||| ||||||| |       
T  15697329 gtcaaagtcagacaaaaacaaaaagagttattggcacctagtaagtgt--ttattggcaactctattttcaaacaaatattagaaaagttcacataa--- 15697235  T
Q  570 ttcacaa--------ctgatggtgttctgttgattttatatatatagtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccg 661  Q
    |||||||        ||||   ||| || |||| ||    || | || |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  15697234 ttcacaactctgagtctgacaatgtacttttgactt----taaacagcggatacatggctccagaatatgctatggctggattattttcagtgaaatccg 15697139  T
Q  662 atgttttcagctttggagttcttgtgttagaaataatttacggaaaaagaaatggtgacttctttctttcagaacatatgcaaagtcttctactatatgt 761  Q
    ||||||||||||||||||||||||| ||||||||  | || |||||||| |||||||| ||| | ||||||||||||| ||||||||||||| |||||||    
T  15697138 atgttttcagctttggagttcttgtattagaaattgtgtatggaaaaaggaatggtgaattcatactttcagaacataggcaaagtcttctattatatgt 15697039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 272 - 786
Target Start/End: Complemental strand, 15722739 - 15722235
Alignment:
Q  272 agatgaggaaaaacataagcatctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgactt 371  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||||||   |||||||| ||||||||| | | |||||| |||||||| |||||||||    
T  15722739 agatgaagaaaaacataagcaactagattggaaattacaactaagcattgtaaatggaatcgcaagaggactacaatacctgcatgaggactctcgactt 15722640  T
Q  372 agagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgata-aa 470  Q
    ||||| |||||  ||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||| |||||||||| |||||| |       
T  15722639 agagtcatccatcgagatctgaaagccagcaacgttcttctggacagtgaaatgaatccaaaaatatcagattttggtttggcaagaaaatttgaaagcg 15722540  T
Q  471 gaccaatgtcagacaaaarcaaagagagtttttggcacctagtatgtgttattattggacactattttc--aaacaaatagtagaaaatttcacatgatt 568  Q
    ||| ||| | |||||||| |||| |||||| |||| |||||||| |   |||||||||  | | |||||  || |||||| ||||||||| | ||| ||     
T  15722539 gacgaat-tgagacaaaaacaaaaagagttgttggtacctagtaag---tattattggcaattcttttctgaatcaaatattagaaaattccccataatc 15722444  T
Q  569 tttcacaactgatggtgttctgttgattttatatatatagtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgtttt 668  Q
    ||  |||||| |     |||| |||||||    || | || |||||||||||||||||||| ||||||| |||  | |||||||| |||||||||||||     
T  15722443 tt--acaactaa---cattctattgattt----taaacagcggatacatggctccagaatatgctatggttggagtgttttcagttaaatccgatgttta 15722353  T
Q  669 cagctttggagttcttgtgttagaaataatttacggaaaaagaaatggtgacttctttctttcagaacatatgcaaagtcttctactatatgtgagtttt 768  Q
     ||||||||||||||| | |||||||| ||||| ||||||||||||||||| |||||||| || || |||| ||||||||||||| || |||||||||||    
T  15722352 tagctttggagttcttatattagaaatcatttatggaaaaagaaatggtgaattctttctctccgaccataggcaaagtcttctattacatgtgagtttt 15722253  T
Q  769 ccttatcacatctaatca 786  Q
     || |||| |||| ||||    
T  15722252 gctgatcatatcttatca 15722235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 271 - 781
Target Start/End: Complemental strand, 15703907 - 15703408
Alignment:
Q  271 cagatgaggaaaaacataagcatctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgact 370  Q
    ||||||||||| | |||||||| || ||||||| ||||||| | || |||| |||||||||  || ||||| |  ||||||||||  |||||||||||||    
T  15703907 cagatgaggaatagcataagcaactcgattggacattacgattgagtattatcaatggaat--cacgaggacttttataccttcaccaggattctcgact 15703810  T
Q  371 tagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaa 470  Q
    |||||| ||||| ||||| || |||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  15703809 tagagttatccatagagaccttaaagcctgcaacgttcttctagatgatgaaatgaatccaaaaatatcagattttggattggcaagaaaatttgagaaa 15703710  T
Q  471 gaccaatgtcagacaaaarcaaagagagtttttggcacctagtatgtgttattattggac-act-attttcaaacaaatagtagaaaatttcacatgatt 568  Q
    | |||| |||||||| || |||| |||||| | || |||||| | ||||||||    ||| |||  |||| ||||||||| |||||||||| ||   |||    
T  15703709 ggccaaagtcagacagaaacaaaaagagttatgggaacctagcaagtgttatt----gacaactctttttaaaacaaatattagaaaattttac---att 15703617  T
Q  569 tttcacaactgatggtgttctgttgattttatatatatagtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgtttt 668  Q
     ||| ||||| |  ||| |||||  ||||    || | || |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  15703616 attcgcaactaacagtgatctgtgcattt----taaacagcggatacatggctccagaatatgctatggctggattattttcagtgaaatctgatgtttt 15703521  T
Q  669 cagctttggagttcttgtgttagaaataatttacggaaaaagaaatggtgacttctttctttcagaacatatgcaaagtcttctactatatgtgagtttt 768  Q
     ||||||||||| ||| | ||||||||  |||| || ||||| ||  |||  ||||||||||  || |||| | |||||||||||||  || ||||||||    
T  15703520 tagctttggagtacttttattagaaatcgtttatgggaaaaggaacagtggattctttcttttggatcatagggaaagtcttctacttcatatgagtttt 15703421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 294 - 768
Target Start/End: Complemental strand, 15712175 - 15711703
Alignment:
Q  294 ctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgacttagagtaatccacagagatctga 393  Q
    ||||||||||   ||||| ||| ||||| ||| || || ||||||||| || |||| ||||| |||||||||||||||||||| ||||| |||||| |||    
T  15712175 ctagattggagtgtacgattaaacattatcaacgggatagcaagaggactgttatatcttcacgaggattctcgacttagagttatccatagagatatga 15712076  T
Q  394 aagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaagaccaatgtcagacaaaarcaaa 493  Q
    |||| |||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||||||  ||||| |||| |||| |||||||| || ||||    
T  15712075 aagcaagcaatgtacttttggacgatgaaatgaatccaaaaatatcagactttggattggcaagaaggtttgaaaaaggccaaagtcagacagaaacaaa 15711976  T
Q  494 gagagtttttggcacctagtatgtgttat----tattggacactat-tttcaaacaaatagtagaaaatttcacatgatttttcacaactgatggtgttc 588  Q
     |||||  | || |||||||| |||| ||     | |   |  ||| | | ||| || ||  |||||| |||| || |||   |||||||||  ||||||    
T  15711975 aagagtcatgggaacctagtaagtgtcatcgacaactcttctttatatatgaaaaaagtaacagaaaacttcatattatt---cacaactgacagtgttc 15711879  T
Q  589 tgttgattttatatatatagtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgt 688  Q
    | |||||||    || |||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||||||||||||||| | |    
T  15711878 tattgattt----taaatagcggatacatggctccagaatatgctatggctgggttattttcagtgaagtctgatgtatttagctttggagttcttatat 15711783  T
Q  689 tagaaataatttacggaaaaagaaatggtgacttctttctttcagaacatatgcaaagtcttctactatatgtgagtttt 768  Q
    |||||||| |||| |||||||||||||| || ||||||||||||||||||| |||||  |||||  ||||||| ||||||    
T  15711782 tagaaatagtttatggaaaaagaaatggagaattctttctttcagaacataggcaaacacttctcttatatgtaagtttt 15711703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 346 - 466
Target Start/End: Complemental strand, 15692779 - 15692659
Alignment:
Q  346 tataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattt 445  Q
    ||||||| |||||||| ||| || | |||||||| || |||||||| ||||| |||||||||||  | ||| ||||||||||||| ||||||||||||||    
T  15692779 tatacctccatgaggactctagattaagagtaattcatagagatctcaaagctagcaatgttctattagatcatgaaatgaatcccaaaatatcagattt 15692680  T
Q  446 tggattggcaagaacatttga 466  Q
    ||||||||||||  |||||||    
T  15692679 tggattggcaagggcatttga 15692659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 605 - 768
Target Start/End: Complemental strand, 15692525 - 15692362
Alignment:
Q  605 atagtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaataatttacgg 704  Q
    |||||||||||||||| ||||||||||| ||||  ||  ||||||| |||||| ||||||| |||||||||||||| || ||||| ||||| |||   ||    
T  15692525 atagtggatacatggcaccagaatacgcaatggaaggagtattttctgtgaaaaccgatgtattcagctttggagtactagtgttggaaatcattagtgg 15692426  T
Q  705 aaaaagaaatggtgacttctttctttcagaacatatgcaaagtcttctactatatgtgagtttt 768  Q
     ||||  |||  ||  |||| ||| |||||||||   || ||||||||| ||||||||||||||    
T  15692425 gaaaaagaatactggattctatctatcagaacatggtcagagtcttctattatatgtgagtttt 15692362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 6e-36; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 272 - 523
Target Start/End: Original strand, 3080333 - 3080584
Alignment:
Q  272 agatgaggaaaaacataagcatctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgactt 371  Q
    |||||||||||||   || | ||| |||||||| ||| | || | ||||| |||||||||||||| |||| |  ||||||||||||| || ||| |||||    
T  3080333 agatgaggaaaaaagaaaacttctggattggaagttaaggctgaacattatcaatggaattgcaaaaggactcttataccttcatgaagactctagactt 3080432  T
Q  372 agagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaag 471  Q
    ||||||||||| ||||| || ||||| || ||||||||  | ||| | || ||||||||||||||||| |||||||||||||||||  ||||||| ||||    
T  3080433 agagtaatccatagagacctaaaagcaagtaatgttctattagatcaagagatgaatccaaaaatatctgattttggattggcaagggcatttgaaaaag 3080532  T
Q  472 accaatgtcagacaaaarcaaagagagtttttggcacctagtatgtgttatt 523  Q
    ||||||||||   |||  |||  |||||| | ||||| ||||||||||||||    
T  3080533 accaatgtcaagaaaacacaagaagagttgtcggcacatagtatgtgttatt 3080584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 293 - 523
Target Start/End: Original strand, 3094791 - 3095021
Alignment:
Q  293 tctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgacttagagtaatccacagagatctg 392  Q
    |||||||||||| ||| |||| | ||||| |||||||||||||| |||| |  | || |||||||| || ||| |||| ||||||||||| ||||| ||     
T  3094791 tctagattggaagttaagactgaacattatcaatggaattgcaaaaggactcttgtatcttcatgaagactctagactaagagtaatccatagagaccta 3094890  T
Q  393 aaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaagaccaatgtcagacaaaarcaa 492  Q
    ||||| || ||||||||  | ||| | || ||||||||||||||||| |||||||||||||||||  ||||||| ||||||||||||||   |||  |||    
T  3094891 aaagcaagtaatgttctcttagatcaagagatgaatccaaaaatatctgattttggattggcaagggcatttgaaaaagaccaatgtcaagaaaacacaa 3094990  T
Q  493 agagagtttttggcacctagtatgtgttatt 523  Q
      |||||| | ||||| ||||||||||||||    
T  3094991 gaagagttgtcggcacatagtatgtgttatt 3095021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 293 - 471
Target Start/End: Complemental strand, 4548177 - 4547999
Alignment:
Q  293 tctagattggaaattacgactaagcattaccaatggaattgcaagaggattgctataccttcatgaggattctcgacttagagtaatccacagagatctg 392  Q
    |||||||||||| ||| |||||| |||||  ||||||||||||| |||| |  | || |||||||| || ||| |||||||||||||||| ||||| ||     
T  4548177 tctagattggaacttaagactaaacattattaatggaattgcaaaaggactcttgtatcttcatgaagactctagacttagagtaatccatagagaccta 4548078  T
Q  393 aaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttgataaag 471  Q
    ||||| || ||||||||| | ||| | || ||||||||||||||||| |||||||||||||||||  ||||||| ||||    
T  4548077 aaagcaagtaatgttcttttagatcaagagatgaatccaaaaatatctgattttggattggcaagggcatttgaaaaag 4547999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 607 - 718
Target Start/End: Original strand, 3080669 - 3080780
Alignment:
Q  607 agtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaataatttacggaa 706  Q
    |||||||||||||| ||||| ||||||||||  ||||||| ||| |||||||| |||||||||||||||||||||||| | ||||||||||||| |||||    
T  3080669 agtggatacatggcaccagagtacgctatggaagggttatattctgtgaaatctgatgttttcagctttggagttcttttattagaaataatttgcggaa 3080768  T
Q  707 aaagaaatggtg 718  Q
     ||| |||||||    
T  3080769 gaaggaatggtg 3080780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 607 - 718
Target Start/End: Original strand, 3095106 - 3095217
Alignment:
Q  607 agtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaataatttacggaa 706  Q
    |||||||||||||| ||||| ||||||||||  ||||||| ||| |||||||| |||||||||||||||||||||||| | ||||||||||||| |||||    
T  3095106 agtggatacatggcaccagagtacgctatggaagggttatattctgtgaaatctgatgttttcagctttggagttcttttattagaaataatttgcggaa 3095205  T
Q  707 aaagaaatggtg 718  Q
     ||| |||||||    
T  3095206 gaaggaatggtg 3095217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 607 - 768
Target Start/End: Complemental strand, 4547849 - 4547688
Alignment:
Q  607 agtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaataatttacggaa 706  Q
    ||||| |||||||||||||||||||||||||  ||||||| |||||||||| | ||||||||||| | |||||||||| | |||||||||||||  ||||    
T  4547849 agtggttacatggctccagaatacgctatggaagggttatattcagtgaaaacagatgttttcagttatggagttcttttattagaaataatttgtggaa 4547750  T
Q  707 aaagaaatggtgacttctttctttcagaacatatgcaaagtcttctactatatgtgagtttt 768  Q
    |||  |||||||  |||| |||   |||||||   |||||||||||  ||||||| ||||||    
T  4547749 aaaagaatggtggattctatctcgaagaacatggtcaaagtcttcttatatatgtaagtttt 4547688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 345 - 465
Target Start/End: Original strand, 3102380 - 3102500
Alignment:
Q  345 ctataccttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagatt 444  Q
    ||||| ||||||||||| ||| | || ||||| || |||||||| |||||||| |||||| ||||  | ||| | ||||||||||||||||| |||||||    
T  3102380 ctatatcttcatgaggactctaggctcagagttattcacagagacctgaaagctagcaatattctattagatcaagaaatgaatccaaaaatctcagatt 3102479  T
Q  445 ttggattggcaagaacatttg 465  Q
    ||||| | |||||||||||||    
T  3102480 ttggacttgcaagaacatttg 3102500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 351 - 465
Target Start/End: Original strand, 3122514 - 3122628
Alignment:
Q  351 cttcatgaggattctcgacttagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggat 450  Q
    ||||| ||||| ||| |||| || || || |||||||| ||||||||||||||| || |  | ||| ||||||||||||||||||| ||||| ||||||     
T  3122514 cttcacgaggactctagactcagggttattcacagagacctgaaagccagcaatattttgttagatcatgaaatgaatccaaaaatttcagactttggac 3122613  T
Q  451 tggcaagaacatttg 465  Q
    | |||||||||||||    
T  3122614 tagcaagaacatttg 3122628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 607 - 684
Target Start/End: Original strand, 3123011 - 3123088
Alignment:
Q  607 agtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttctt 684  Q
    ||||||||||||||||||||||| ||||| |  || || ||||||||||| || ||||||||||||||||| ||||||    
T  3123011 agtggatacatggctccagaatatgctatcgaaggcttgttttcagtgaagtcagatgttttcagctttggcgttctt 3123088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 684
Target Start/End: Original strand, 3103480 - 3103557
Alignment:
Q  607 agtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttctt 684  Q
    |||||||| |||||||||||||| |||||||  || || |||||||| || || ||||||||||||||||| ||||||    
T  3103480 agtggatatatggctccagaatatgctatggaaggattgttttcagtaaagtcagatgttttcagctttggtgttctt 3103557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 684
Target Start/End: Complemental strand, 3132839 - 3132760
Alignment:
Q  607 agtggatacatggctccagaatac--gctatggctgggttattttcagtgaaatccgatgttttcagctttggagttctt 684  Q
    |||||||||||||||||||||||   ||||| |  || || ||||||||||| || ||||||||||||||||| ||||||    
T  3132839 agtggatacatggctccagaatatatgctatcgaaggcttgttttcagtgaagtcagatgttttcagctttggcgttctt 3132760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 418 - 456
Target Start/End: Original strand, 1077386 - 1077424
Alignment:
Q  418 atgaaatgaatccaaaaatatcagattttggattggcaa 456  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  1077386 atgatatgaatccaaaaatatcagattttggcttggcaa 1077424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 36370555 - 36370636
Alignment:
Q  384 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||||||| ||||||||||||||||| || |||| |||||||||||| ||||| |||||||||||  |||| |||| |||||    
T  36370555 agagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagattttggtatggctagaatatttg 36370636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 36399760 - 36399821
Alignment:
Q  384 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattt 445  Q
    |||||||| ||||||||||||||||| || |||| |||||||||||| ||||| ||||||||    
T  36399760 agagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagattt 36399821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 36435825 - 36435906
Alignment:
Q  384 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||||||| ||||||||||||||||| || |||| || ||||||||| ||||| |||||||||||  |||| |||| |||||    
T  36435825 agagatctaaaagccagcaatgttctccttgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 36435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 31717667 - 31717753
Alignment:
Q  379 tccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||| |||||||| |||  |||||||||| | || ||||||    ||||||||||||||||||||||||||||||| ||||| ||||    
T  31717667 tccatagagatctcaaaagcagcaatgttttactagatgatactttgaatccaaaaatatcagattttggattggctagaacttttg 31717753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 31702382 - 31702423
Alignment:
Q  424 tgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  31702382 tgaatccaaaaatatcagattttggattggctagaacttttg 31702423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 31724937 - 31724978
Alignment:
Q  424 tgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  31724937 tgaatccaaaaatatcagattttggattggctagaacttttg 31724978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 36376327 - 36376408
Alignment:
Q  384 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||||||| ||||||||||| ||||| || |||| || ||||||||| ||||| |||||||||||  |||| |||| |||||    
T  36376327 agagatctaaaagccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 36376408  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 36407217 - 36407298
Alignment:
Q  384 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||  |||| |||| |||||    
T  36407217 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 36407298  T

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Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 36412340 - 36412421
Alignment:
Q  384 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||  |||| |||| |||||    
T  36412340 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 36412421  T

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Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 465
Target Start/End: Original strand, 36419371 - 36419460
Alignment:
Q  376 taatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    ||||||| |||||||| ||||||||||| ||||| || |||| || ||||||||| ||||| || ||||||||  |||| |||| |||||    
T  36419371 taatccatagagatctaaaagccagcaacgttctccttgatgctgtaatgaatcccaaaatctcggattttggtatggctagaatatttg 36419460  T

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Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 36429372 - 36429453
Alignment:
Q  384 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||||||| ||||||||||| ||||| || |||| || ||||||||| ||||| |||||||||||  |||| |||| |||||    
T  36429372 agagatctaaaagccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 36429453  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 459
Target Start/End: Complemental strand, 2662569 - 2662477
Alignment:
Q  367 gacttagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaa 459  Q
    |||| ||| |||| || |||||||| ||||| |||||||||||| | ||||  ||||||||||||||||| || || |||||| |||||||||    
T  2662569 gactaagaataattcatagagatctaaaagcaagcaatgttcttttagatggcgaaatgaatccaaaaatttctgactttggaatggcaagaa 2662477  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 2672478 - 2672548
Alignment:
Q  378 atccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttgg 448  Q
    |||||||| ||||| || || ||||||||||| || ||| | |||||||||||||| ||||||||||||||    
T  2672478 atccacagggatctcaaggcaagcaatgttctacttgataaagaaatgaatccaaagatatcagattttgg 2672548  T

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Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 607 - 677
Target Start/End: Complemental strand, 2704382 - 2704312
Alignment:
Q  607 agtggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttgg 677  Q
    |||||||| ||| ||||||||||||| ||||  ||||| ||||||| |||||| |||||||| ||||||||    
T  2704382 agtggatatatgtctccagaatacgcaatggaggggttgttttcagagaaatcagatgtttttagctttgg 2704312  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 695
Target Start/End: Original strand, 2672715 - 2672800
Alignment:
Q  610 ggatacatggctccagaatacgctatggctgggttattttcagtgaaatccgatgttttcagctttggagttcttgtgttagaaat 695  Q
    ||||| ||| |||||||||| || |||| ||| |  ||||| | |||||| ||||||||||| ||||||||||| ||| |||||||    
T  2672715 ggatatatgtctccagaatatgcaatgggtggatatttttctgcgaaatctgatgttttcagttttggagttctcgtgctagaaat 2672800  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 421 - 459
Target Start/End: Complemental strand, 470101 - 470063
Alignment:
Q  421 aaatgaatccaaaaatatcagattttggattggcaagaa 459  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  470101 aaatgaatccaaaaatatcagattttggtttggcaagaa 470063  T

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Target: chr1 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 465
Target Start/End: Complemental strand, 21918037 - 21917939
Alignment:
Q  367 gacttagagtaatccacagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 465  Q
    |||||||||| || ||| ||||| ||||| | |||||  ||||||| ||||| || ||| | |||||||| |||||||||||| | |||||||||||||    
T  21918037 gacttagagttattcaccgagatttgaaaactagcaacattcttctagatgaggagatgcaaccaaaaatctcagattttggaatagcaagaacatttg 21917939  T

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