View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3096_high_7 (Length: 315)
Name: NF3096_high_7
Description: NF3096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3096_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 308
Target Start/End: Complemental strand, 1769530 - 1769241
Alignment:
| Q |
19 |
catgaaccaattagaagcatttagtctacaaggaaacaaattcacaggaccaattcctagttcaatatctgcattgactaaagtaactcagttaaaacta |
118 |
Q |
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| T |
1769530 |
catgaaccaattagaagcatttagtctacaagaaaacaaattcacaggaccaattcctagttcaatatctgcattgactaaattaactcagttaaaacta |
1769431 |
T |
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| Q |
119 |
ggtaacaattttctcacaggaaccattccagtatcccttaaaaacctaacaaatctcacataccttagtctccaaggaaaccaacttagtggtaacatac |
218 |
Q |
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| T |
1769430 |
ggtaacaattttctcacaggaaccattccagtatcccttaaaaacctaacaaatctcacataccttagtctccaaggaaaccaacttagtggtaacatac |
1769331 |
T |
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| Q |
219 |
ctgatattttcacttccttaaaaaaccttattattctcgaactttctcacaacaaattttccgggaatattccactttcaatttcatctc |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1769330 |
ctgatattttcacttccttaaaaaaccttattattctccaactttctcacaacaaattttccgggaatattccactttcaatttcatctc |
1769241 |
T |
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