View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3097_high_105 (Length: 202)
Name: NF3097_high_105
Description: NF3097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3097_high_105 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 12909874 - 12909704
Alignment:
| Q |
15 |
cagagacaattaatggttgaattaaaggaccacataaaaagcttgtacatttgttggtaagtgcctttaaagtttgtcacatgatgatgctacctttcat |
114 |
Q |
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| T |
12909874 |
cagaaacaattaatggttgaattaaaggaccacataaaaagcttgtacatttgttggtaagtgcctttaaagtttgtcacatgatgatgctacctttcat |
12909775 |
T |
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| Q |
115 |
ttatttcaaaattttcagtaactggtgacaacaattcagtagctcccatgtggttattgaatcttgctttt |
185 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12909774 |
ttatttcaaaattttcagtaactggtgacaacaattcagtagctcccatgtggttattgaatcttgctttt |
12909704 |
T |
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