View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3097_low_77 (Length: 249)
Name: NF3097_low_77
Description: NF3097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3097_low_77 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10970539 - 10970298
Alignment:
| Q |
1 |
ttaacagttgggatctca--actgcatgcttttcctgactgtgtagaatctagaatcgctaatgtaattgaatacttgaaacatctttagtactgaaatg |
98 |
Q |
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| T |
10970539 |
ttaacagttgggatctcttgactgcatgcttttcctgactgtgtagaatctagaatcgctaatgtaattgaatacttgaaacatctttagtactgaaatg |
10970440 |
T |
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| Q |
99 |
gaaatttatatgaacaaatacatatgctgcttcacttgtttataaaccattttctaataaattttcagaagaagcgctggagatgaggaaaagatgttgt |
198 |
Q |
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| T |
10970439 |
gaaatttatatgaacaaatacctatgctgcttcacttgtttataaaccattttctaataaattttcagaagaagcgctggagatgaggaaaagatgttgt |
10970340 |
T |
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| Q |
199 |
tcctgtattttaatcgagtaagttgttcatcttttttctgtg |
240 |
Q |
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||||||||||||||||||||||||||||||||||| |||||| |
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| T |
10970339 |
tcctgtattttaatcgagtaagttgttcatcttttgtctgtg |
10970298 |
T |
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