View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3097_low_82 (Length: 246)
Name: NF3097_low_82
Description: NF3097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3097_low_82 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 40483707 - 40483480
Alignment:
| Q |
1 |
aagatggttaattgttctctaaaaaacagatggttaattttttattcacccacttcctgatatgcccctatgtatgcagtttcaatttagattatcttgg |
100 |
Q |
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| T |
40483707 |
aagatggttaattgttctctaaaaaacagatggttaattttttattcacccacttccttatatgcccctatgtatgcagtttcaatttagattatcttgg |
40483608 |
T |
|
| Q |
101 |
gggtgatgacattgcatttcatagccttacctattaaataatcatatcaattttaagtttgagctccttctacgaaatataacaatttttgttgccttgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40483607 |
gggtgatgacattgcatttcatagccttacctattaaataatcatatcaattttaagtttgagctccttctacgaaatataacaatttttgttgccttg- |
40483509 |
T |
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| Q |
201 |
ggtattttatcagatgatacgtaatgaat |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
40483508 |
ggtattttatcagatgatacgtaatgaat |
40483480 |
T |
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