View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3101_high_14 (Length: 353)

Name: NF3101_high_14
Description: NF3101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3101_high_14
NF3101_high_14
[»] chr2 (34 HSPs)
chr2 (163-342)||(45133055-45133234)
chr2 (186-274)||(44219117-44219205)
chr2 (18-85)||(4852666-4852733)
chr2 (18-85)||(30466823-30466890)
chr2 (18-80)||(11941208-11941270)
chr2 (18-71)||(36242319-36242372)
chr2 (25-78)||(43374330-43374383)
chr2 (18-78)||(34516414-34516474)
chr2 (18-78)||(41314128-41314188)
chr2 (18-86)||(44929838-44929906)
chr2 (18-78)||(44946053-44946113)
chr2 (18-85)||(25293296-25293363)
chr2 (30-85)||(45132436-45132491)
chr2 (75-116)||(45132967-45133008)
chr2 (18-78)||(2140486-2140546)
chr2 (18-78)||(15038096-15038156)
chr2 (18-78)||(18692097-18692157)
chr2 (18-78)||(19054163-19054223)
chr2 (18-78)||(28669010-28669070)
chr2 (18-78)||(33827573-33827633)
chr2 (18-78)||(35171937-35171997)
chr2 (27-78)||(4567429-4567480)
chr2 (18-71)||(18976462-18976515)
chr2 (18-78)||(14486962-14487022)
chr2 (18-78)||(27269344-27269404)
chr2 (18-78)||(31778168-31778228)
chr2 (18-71)||(5394154-5394207)
chr2 (25-70)||(8259041-8259086)
chr2 (18-78)||(6714295-6714355)
chr2 (18-78)||(8192352-8192412)
chr2 (18-78)||(24196139-24196199)
chr2 (42-78)||(27290735-27290771)
chr2 (18-78)||(39957895-39957955)
chr2 (18-78)||(44610176-44610236)
[»] chr1 (30 HSPs)
chr1 (173-342)||(42226220-42226389)
chr1 (18-80)||(24122160-24122222)
chr1 (20-78)||(27454864-27454922)
chr1 (18-78)||(4621237-4621297)
chr1 (18-77)||(34778476-34778535)
chr1 (18-80)||(23041659-23041721)
chr1 (20-85)||(36155881-36155946)
chr1 (18-78)||(48699896-48699956)
chr1 (18-77)||(17935906-17935965)
chr1 (18-85)||(24674530-24674597)
chr1 (18-85)||(26513141-26513208)
chr1 (18-85)||(45331614-45331681)
chr1 (28-85)||(5315478-5315535)
chr1 (79-116)||(42226116-42226153)
chr1 (18-78)||(7197247-7197307)
chr1 (18-78)||(7766727-7766787)
chr1 (18-78)||(9500355-9500415)
chr1 (18-78)||(15059402-15059462)
chr1 (18-77)||(37351454-37351513)
chr1 (32-78)||(14603947-14603993)
chr1 (18-71)||(1379034-1379087)
chr1 (25-70)||(8779744-8779789)
chr1 (18-71)||(21726866-21726919)
chr1 (18-78)||(1486557-1486617)
chr1 (18-78)||(18533724-18533784)
chr1 (18-78)||(22910008-22910068)
chr1 (18-78)||(27159222-27159282)
chr1 (18-78)||(33905510-33905570)
chr1 (18-78)||(50202683-50202742)
chr1 (18-70)||(52135263-52135315)
[»] chr6 (20 HSPs)
chr6 (18-85)||(9690631-9690698)
chr6 (18-78)||(1345072-1345132)
chr6 (18-78)||(3222636-3222696)
chr6 (18-86)||(9844075-9844143)
chr6 (18-78)||(34147483-34147543)
chr6 (18-78)||(34160099-34160159)
chr6 (18-77)||(9239112-9239171)
chr6 (25-78)||(15360098-15360151)
chr6 (18-78)||(654146-654206)
chr6 (18-78)||(11007302-11007362)
chr6 (26-78)||(14213027-14213079)
chr6 (18-78)||(21148511-21148571)
chr6 (18-78)||(21982321-21982380)
chr6 (18-78)||(28672204-28672264)
chr6 (18-69)||(33718478-33718529)
chr6 (18-78)||(5360071-5360131)
chr6 (18-78)||(11449008-11449068)
chr6 (18-78)||(11841037-11841097)
chr6 (20-85)||(15730488-15730553)
chr6 (18-78)||(14504082-14504142)
[»] chr5 (37 HSPs)
chr5 (18-85)||(34310279-34310346)
chr5 (18-78)||(38630979-38631039)
chr5 (18-85)||(9659304-9659371)
chr5 (18-85)||(22693072-22693139)
chr5 (18-71)||(35425150-35425203)
chr5 (18-78)||(8484661-8484721)
chr5 (18-78)||(18207344-18207404)
chr5 (18-78)||(19456211-19456271)
chr5 (18-78)||(27498731-27498791)
chr5 (18-78)||(37495191-37495251)
chr5 (18-78)||(41351104-41351164)
chr5 (26-85)||(11926494-11926553)
chr5 (18-80)||(13659243-13659305)
chr5 (18-80)||(27487552-27487614)
chr5 (18-71)||(33709510-33709563)
chr5 (18-78)||(4603914-4603974)
chr5 (18-78)||(7085626-7085686)
chr5 (18-78)||(10869565-10869625)
chr5 (21-85)||(23270515-23270579)
chr5 (18-78)||(30485965-30486025)
chr5 (27-78)||(10631289-10631340)
chr5 (26-85)||(25750606-25750665)
chr5 (18-80)||(19145410-19145472)
chr5 (25-71)||(38684351-38684397)
chr5 (21-78)||(5049276-5049333)
chr5 (18-78)||(15641106-15641165)
chr5 (18-78)||(32059440-32059500)
chr5 (18-69)||(42193620-42193671)
chr5 (18-67)||(5067398-5067447)
chr5 (26-71)||(11464915-11464960)
chr5 (25-78)||(25548534-25548587)
chr5 (21-78)||(28614486-28614543)
chr5 (18-86)||(930478-930546)
chr5 (18-70)||(13038463-13038515)
chr5 (18-70)||(13108458-13108510)
chr5 (18-78)||(22392825-22392885)
chr5 (19-71)||(38086361-38086413)
[»] chr4 (39 HSPs)
chr4 (18-78)||(23639761-23639821)
chr4 (18-78)||(23645419-23645479)
chr4 (18-80)||(51595159-51595221)
chr4 (18-78)||(5609202-5609262)
chr4 (26-78)||(34723944-34723996)
chr4 (18-78)||(34844758-34844818)
chr4 (18-78)||(40058852-40058912)
chr4 (18-78)||(45787704-45787764)
chr4 (18-77)||(52983756-52983815)
chr4 (17-71)||(43719094-43719148)
chr4 (18-80)||(52494625-52494687)
chr4 (18-78)||(19660532-19660592)
chr4 (18-78)||(27528795-27528855)
chr4 (18-78)||(32986334-32986394)
chr4 (18-86)||(33696271-33696339)
chr4 (18-85)||(12824537-12824604)
chr4 (18-85)||(33289191-33289258)
chr4 (18-71)||(30879173-30879226)
chr4 (18-63)||(32942507-32942552)
chr4 (18-71)||(37302624-37302677)
chr4 (18-71)||(55961761-55961814)
chr4 (18-78)||(9978509-9978569)
chr4 (27-71)||(13871325-13871369)
chr4 (25-85)||(35229312-35229372)
chr4 (18-78)||(44343651-44343711)
chr4 (18-78)||(46714530-46714590)
chr4 (18-69)||(4064997-4065048)
chr4 (18-85)||(7093508-7093575)
chr4 (18-85)||(20566487-20566554)
chr4 (18-76)||(20077986-20078044)
chr4 (25-71)||(37172909-37172955)
chr4 (28-85)||(25852362-25852419)
chr4 (18-71)||(51535758-51535811)
chr4 (18-78)||(23131436-23131496)
chr4 (18-70)||(27574455-27574507)
chr4 (18-70)||(32990572-32990624)
chr4 (18-78)||(36131510-36131570)
chr4 (18-70)||(54127350-54127402)
chr4 (26-78)||(55158343-55158395)
[»] chr3 (45 HSPs)
chr3 (18-78)||(10083819-10083879)
chr3 (18-78)||(10190742-10190802)
chr3 (18-85)||(4048087-4048154)
chr3 (18-85)||(21363080-21363147)
chr3 (18-85)||(24407398-24407465)
chr3 (18-85)||(49258255-49258322)
chr3 (18-80)||(52821634-52821696)
chr3 (18-78)||(8097279-8097339)
chr3 (18-78)||(26174250-26174310)
chr3 (18-86)||(48105014-48105082)
chr3 (18-78)||(53848434-53848494)
chr3 (18-85)||(18176880-18176947)
chr3 (26-85)||(39041845-39041904)
chr3 (18-80)||(7485529-7485590)
chr3 (25-78)||(53424177-53424230)
chr3 (18-70)||(4252404-4252456)
chr3 (18-78)||(8958035-8958095)
chr3 (18-78)||(15566500-15566560)
chr3 (18-78)||(24165715-24165775)
chr3 (18-78)||(40133449-40133509)
chr3 (18-82)||(50731233-50731297)
chr3 (18-82)||(50781557-50781621)
chr3 (18-85)||(35493048-35493115)
chr3 (18-85)||(54475818-54475885)
chr3 (25-70)||(25379905-25379950)
chr3 (18-71)||(30257761-30257814)
chr3 (30-78)||(3747730-3747778)
chr3 (18-78)||(8456150-8456210)
chr3 (18-78)||(25289715-25289774)
chr3 (18-78)||(30807153-30807212)
chr3 (18-78)||(32151561-32151621)
chr3 (18-78)||(34492575-34492635)
chr3 (18-78)||(45272416-45272476)
chr3 (18-78)||(45529755-45529814)
chr3 (18-78)||(46576485-46576545)
chr3 (18-78)||(48977525-48977585)
chr3 (26-78)||(52455649-52455701)
chr3 (18-78)||(53233911-53233970)
chr3 (18-70)||(55371302-55371354)
chr3 (18-85)||(25017626-25017692)
chr3 (18-85)||(33398461-33398528)
chr3 (20-78)||(1178310-1178367)
chr3 (18-80)||(4462769-4462831)
chr3 (26-78)||(14997755-14997807)
chr3 (26-78)||(32094757-32094809)
[»] scaffold0217 (1 HSPs)
scaffold0217 (18-85)||(7302-7369)
[»] chr8 (30 HSPs)
chr8 (18-85)||(21603371-21603438)
chr8 (18-78)||(2639411-2639471)
chr8 (18-78)||(4718786-4718846)
chr8 (18-78)||(8765526-8765586)
chr8 (18-86)||(28193615-28193683)
chr8 (25-78)||(34237655-34237708)
chr8 (18-78)||(2618327-2618387)
chr8 (18-78)||(10292195-10292255)
chr8 (18-78)||(14633095-14633155)
chr8 (18-78)||(32879420-32879480)
chr8 (18-78)||(33747023-33747083)
chr8 (18-78)||(39349397-39349457)
chr8 (18-78)||(42328145-42328205)
chr8 (27-78)||(3734623-3734674)
chr8 (18-85)||(18128654-18128721)
chr8 (18-79)||(42643117-42643178)
chr8 (25-85)||(6953001-6953060)
chr8 (18-78)||(20306049-20306109)
chr8 (18-78)||(21092682-21092742)
chr8 (18-77)||(7557952-7558011)
chr8 (18-85)||(20470058-20470124)
chr8 (18-85)||(25248488-25248554)
chr8 (32-78)||(9713609-9713655)
chr8 (25-78)||(4698723-4698776)
chr8 (18-78)||(19471751-19471811)
chr8 (18-78)||(19542675-19542735)
chr8 (18-78)||(19589961-19590021)
chr8 (18-78)||(33534567-33534627)
chr8 (18-78)||(34610687-34610747)
chr8 (18-78)||(34639208-34639268)
[»] chr7 (34 HSPs)
chr7 (21-78)||(16374138-16374195)
chr7 (18-78)||(7275418-7275478)
chr7 (18-78)||(22120029-22120089)
chr7 (18-78)||(31712902-31712962)
chr7 (18-78)||(40542910-40542970)
chr7 (18-85)||(3851898-3851965)
chr7 (18-85)||(17196943-17197010)
chr7 (25-78)||(2751419-2751472)
chr7 (21-78)||(23092240-23092297)
chr7 (16-85)||(27009499-27009568)
chr7 (18-78)||(654705-654765)
chr7 (18-70)||(7175870-7175922)
chr7 (18-78)||(11997990-11998050)
chr7 (18-78)||(21835292-21835352)
chr7 (18-78)||(22703627-22703687)
chr7 (18-78)||(27312293-27312353)
chr7 (18-78)||(42913513-42913573)
chr7 (18-85)||(39145645-39145712)
chr7 (19-85)||(36772296-36772362)
chr7 (29-86)||(22696473-22696530)
chr7 (18-78)||(21217833-21217893)
chr7 (23-71)||(25102816-25102864)
chr7 (18-78)||(28089960-28090020)
chr7 (18-78)||(31197731-31197791)
chr7 (26-85)||(18044256-18044315)
chr7 (18-85)||(25333544-25333610)
chr7 (18-77)||(32849732-32849791)
chr7 (25-78)||(2344447-2344500)
chr7 (26-71)||(17212202-17212247)
chr7 (18-71)||(43785306-43785359)
chr7 (18-78)||(22643342-22643402)
chr7 (18-78)||(29861811-29861871)
chr7 (27-71)||(36395496-36395540)
chr7 (45-85)||(41907507-41907547)
[»] scaffold0576 (1 HSPs)
scaffold0576 (25-78)||(5082-5135)
[»] scaffold0199 (1 HSPs)
scaffold0199 (18-78)||(8451-8511)
[»] scaffold0102 (1 HSPs)
scaffold0102 (18-78)||(39229-39289)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-78)||(40462-40521)
[»] scaffold0020 (1 HSPs)
scaffold0020 (26-86)||(123058-123117)
[»] scaffold0019 (1 HSPs)
scaffold0019 (18-78)||(161946-162006)
[»] scaffold0328 (1 HSPs)
scaffold0328 (18-85)||(13040-13107)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-85)||(66891-66958)
[»] scaffold0051 (1 HSPs)
scaffold0051 (20-78)||(52871-52929)
[»] scaffold0623 (1 HSPs)
scaffold0623 (18-78)||(1057-1116)
[»] scaffold0366 (1 HSPs)
scaffold0366 (18-78)||(9300-9359)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-85)||(97359-97426)
[»] scaffold0459 (1 HSPs)
scaffold0459 (18-78)||(10695-10754)
[»] scaffold0016 (1 HSPs)
scaffold0016 (26-78)||(32433-32484)


Alignment Details
Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 163 - 342
Target Start/End: Original strand, 45133055 - 45133234
Alignment:
Q  163 gcacaacacaccaccatcctccacaacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccacca 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45133055 gcacaacacaccaccatcctccacaacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccacca 45133154  T
Q  263 tcaatccgttcaaagctttcctctctcatgccgccgtcagaaacatccgcttctccctcaagttgcgagaaacccgttca 342  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45133155 tcaattcgttcaaagctttcctctctcacgccgccgtcagaaacatccgcttctccctcaagttgtgagaaacccgttca 45133234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 44219205 - 44219117
Alignment:
Q  186 caacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccaccatcaatccgttca 274  Q
    |||||| |||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  44219205 caacaccaccgtcttccaccaccgtcttcttcaccagcgctccctccattgtcaaccaccatcgtcctcacccgccatcaatctgttca 44219117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 4852666 - 4852733
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||| || |||||||| ||||    
T  4852666 aagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagttttaaaaaaa 4852733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 30466890 - 30466823
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| | ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||    
T  30466890 aagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagttttaaaaaaa 30466823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 11941270 - 11941208
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
T  11941270 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaa 11941208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 36242372 - 36242319
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  36242372 aagtgggcggtgggattggtcccctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 43374383 - 43374330
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  43374383 cggtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 43374330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 34516474 - 34516414
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34516474 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 34516414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 41314128 - 41314188
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  || ||||||||||||||| ||||||||||| ||||||    
T  41314128 aagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagtttt 41314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 44929906 - 44929838
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    ||||||||||||||||||||||  | | |||| ||||||||||||||||||||| |||||||| |||||    
T  44929906 aagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagttttaaaaaaat 44929838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 44946113 - 44946053
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  44946113 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 25293296 - 25293363
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| || ||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  25293296 aagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 25293363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 45132436 - 45132491
Alignment:
Q  30 ggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||| ||||    
T  45132436 ggattggtcctctcggattaatcgattcttggatcggatacctgattttaaaaaaa 45132491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 45132967 - 45133008
Alignment:
Q  75 ttttaataaaatgtaagggcaatgttggtttttcagcagaaa 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  45132967 ttttaataaaatgtaagggcagtgttggtttttcagcagaaa 45133008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2140546 - 2140486
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||| |||||||||||||| ||||||    
T  2140546 aagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 2140486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 15038096 - 15038156
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  || ||||| ||||||||||||||||||||| ||||||    
T  15038096 aagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 18692097 - 18692157
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  18692097 aagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagtttt 18692157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 19054163 - 19054223
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  19054163 aagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagtttt 19054223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 28669010 - 28669070
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||| |||||||||||||| ||||||    
T  28669010 aagtgggcggtgggattggtcccctcggattagtcgatttttggatcggataccgagtttt 28669070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 33827633 - 33827573
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  33827633 aagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 35171937 - 35171997
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  35171937 aagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 4567480 - 4567429
Alignment:
Q  27 gtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||| |||||||| || |||||||||||||||||| ||||||    
T  4567480 gtgggattggtcctctcggattagtcaattcttggatcggatacccagtttt 4567429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 18976515 - 18976462
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| |||||||||||||||  ||| |||| |||||||||||||||||||||    
T  18976515 aagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggatacc 18976462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 14486962 - 14487022
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  14486962 aagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 14487022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 27269404 - 27269344
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| |||  |||||||| ||||||||||||| ||||||| ||||||    
T  27269404 aagtgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 31778168 - 31778228
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||| |||||||||| || ||||| ||  ||||||||||||||||| ||||||    
T  31778168 aagtggacggtgagattggtcctctcagattagtcagttcttggatcggataccgagtttt 31778228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 5394154 - 5394207
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| ||||||||||||||| ||||||||| ||| | ||| |||||||||||    
T  5394154 aagtgggcggtgggattggtccgttcggattagtcggtccttagatcggatacc 5394207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 8259041 - 8259086
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||||||| || | ||||||||| ||||||||||||||||||||    
T  8259041 cggtgggattagttccttcggattagtcgattcttggatcggatac 8259086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 6714355 - 6714295
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||| |||||||||  ||  |||| ||||||||||||| ||||||| ||||||    
T  6714355 aagtggacggtgagattggtcccctcaaattagtcgattcttggattggataccgagtttt 6714295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8192412 - 8192352
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||| ||  |||||||| ||| | ||||||||||||||| ||||||    
T  8192412 aagtgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagtttt 8192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 24196139 - 24196199
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||| || ||| ||||||| ||||||    
T  24196139 aagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagtttt 24196199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 27290735 - 27290771
Alignment:
Q  42 tcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  27290735 tcggattagtcgattcttggatcggataccgagtttt 27290771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 39957895 - 39957955
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| || |||||||||| |  |||||||| ||||||||||||| ||||||| ||||||    
T  39957895 aagtgggcgatgggattggttccctcggattagtcgattcttggattggataccgagtttt 39957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 44610176 - 44610236
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||| |||||||| || ||||| ||||||    
T  44610176 aagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 8e-46; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 173 - 342
Target Start/End: Original strand, 42226220 - 42226389
Alignment:
Q  173 ccaccatcctccacaacacaaccgtcctccaccaccatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccaccatcaatccgtt 272  Q
    |||||||| ||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42226220 ccaccatcttccacaacaccgtcgtcctccaccacaatcttcttcaccggcgctccctccattctcaaccaccatcgtcctcacccaccatcaatccgtt 42226319  T
Q  273 caaagctttcctctctcatgccgccgtcagaaacatccgcttctccctcaagttgcgagaaacccgttca 342  Q
    ||||| |  ||||||||| ||| | ||| |  || | | ||||||||||| |||| ||||||||||||||    
T  42226320 caaagttggcctctctcacgccactgtctgcgacgtactcttctccctcacgttgtgagaaacccgttca 42226389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 24122160 - 24122222
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
T  24122160 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaa 24122222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 27454922 - 27454864
Alignment:
Q  20 gtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||| |||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  27454922 gtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagtttt 27454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 4621297 - 4621237
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  4621297 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 34778476 - 34778535
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 77  Q
    ||||||||||||||||||||||  | |||||| ||||||||||||||||||||| |||||    
T  34778476 aagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 23041659 - 23041721
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||||| |||||||||||||  ||| |||| ||||||||||||||||||||| ||||||||    
T  23041659 aagtggacagtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 23041721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 36155946 - 36155881
Alignment:
Q  20 gtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||| ||||||||||||||| |||  |||| ||||||||||||||||||||| |||||||| ||||    
T  36155946 gtgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagttttaaaaaaa 36155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 48699896 - 48699956
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||||||||| | ||||||    
T  48699896 aagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagtttt 48699956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 17935906 - 17935965
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 77  Q
    |||||| || ||||||||||||  |||||||| ||||||||||||||||||||| |||||    
T  17935906 aagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 24674530 - 24674597
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  24674530 aagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaattttaaaaaaa 24674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 26513208 - 26513141
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||| ||||||  |||||||| ||||||||||||||| ||||| |||||||| ||||    
T  26513208 aagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagttttaaaaaaa 26513141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 45331681 - 45331614
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||||||||||||||  |||  || |||||||||||||||| |||||||||| |||||||| ||||    
T  45331681 aagtggacggtgggattaatcccctcagattaatcgattcttgaatcggataccgagttttaaaaaaa 45331614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 5315478 - 5315535
Alignment:
Q  28 tgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||  |||||| | ||||||||||||||||||||| |||||||| ||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagttttaaaaaaa 5315535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 42226116 - 42226153
Alignment:
Q  79 aataaaatgtaagggcaatgttggtttttcagcagaaa 116  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  42226116 aataaaatgtaagggcaatgttggtttttcaccagaaa 42226153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 7197307 - 7197247
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||| |||||||||  |||||||| ||||||| ||||||||||||| ||||||    
T  7197307 aagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 7766787 - 7766727
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||| |||||||| | ||||||    
T  7766787 aagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 7766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 9500415 - 9500355
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||| ||||||||  ||||||||| ||||||||||||||||||| | ||||||    
T  9500415 aagtgggcggtgagattggtctcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 15059462 - 15059402
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  15059462 aagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 37351513 - 37351454
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 77  Q
    |||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| |||||    
T  37351513 aagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttt 37351454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 14603947 - 14603993
Alignment:
Q  32 attggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagtttt 14603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 1379034 - 1379087
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||||||||| |||||||||  || ||||| ||||||||| |||||||||||    
T  1379034 aagtggacggtgagattggtcccctcagattagtcgattcttagatcggatacc 1379087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 8779789 - 8779744
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||||    
T  8779789 cggtgggattggtcccctcggattagtcgattcttagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 21726866 - 21726919
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| ||||||| ||| |||  || |||||||||||||||||||||||||||    
T  21726866 aagtgggcggtggggttgatcccctcagattaatcgattcttggatcggatacc 21726919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 1486557 - 1486617
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||| |||||  || ||||| ||| | ||||||||||||||| ||||||    
T  1486557 aagtggacggtgggatcggtcccctccgattagtcggtccttggatcggataccgagtttt 1486617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 18533784 - 18533724
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| | |||||||||||||  ||  |||||||||||||| ||||||||||| ||||||    
T  18533784 aagtgggccgtgggattggtcccctcatattaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 22910008 - 22910068
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||| ||||  |||||||| ||||| ||| ||||||||||| ||||||    
T  22910008 aagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagtttt 22910068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 27159222 - 27159282
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  || ||||| |||||  |||||||||||| | ||||||    
T  27159222 aagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagtttt 27159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 33905570 - 33905510
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||||| |||  ||  ||| |||||||||| ||||||||||| ||||||    
T  33905570 aagtggacggtgggattgatcccctcaaatttatcgattctttgatcggataccgagtttt 33905510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 50202683 - 50202742
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||| ||||||||  |||||||||||||||||| ||||||||| | ||||||    
T  50202683 aagtgggcggtggaattggtcccctcggattaatcgattctt-gatcggatatcgagtttt 50202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 52135263 - 52135315
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    ||||||||||||||||||||||  ||  |||| ||| ||||||||||||||||    
T  52135263 aagtggacggtgggattggtcccctcatattagtcggttcttggatcggatac 52135315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 9690698 - 9690631
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||    
T  9690698 aagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagttttaaaaaaa 9690631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 1345072 - 1345132
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  1345072 aagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 3222696 - 3222636
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  3222696 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 9844075 - 9844143
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    |||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| | |||||| |||||||    
T  9844075 aagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttcataaaat 9844143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 34147483 - 34147543
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34147483 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 34160099 - 34160159
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34160099 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9239112 - 9239171
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 77  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||    
T  9239112 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 15360151 - 15360098
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  15360151 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 654206 - 654146
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||| |||||||||||||| ||||||    
T  654206 aagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11007302 - 11007362
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||| ||  |||||||| ||||||||| ||||||||||||||||||    
T  11007302 aagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagtttt 11007362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 14213027 - 14213079
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  14213027 ggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 14213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 21148571 - 21148511
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  21148571 aagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 21982380 - 21982321
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||    
T  21982380 aagtgggcggtgggattggtccct-cggattagtcgattcttggatcggataccgagtttt 21982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 28672204 - 28672264
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  28672204 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 33718529 - 33718478
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 69  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  33718529 aagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 5360131 - 5360071
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  5360131 aagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11449008 - 11449068
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||| |||||||| | ||||||    
T  11449008 aagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11841037 - 11841097
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||| ||||  ||| |||| |||||| |||||||||||||| ||||||    
T  11841037 aagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 15730553 - 15730488
Alignment:
Q  20 gtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||| ||||||||||||||   |||||||| ||||||||| ||||||||| | |||||||| ||||    
T  15730553 gtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagttttaaaaaaa 15730488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 14504142 - 14504082
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| |||| ||| |||| ||||| |||| |||||||||| ||||||    
T  14504142 aagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 34310279 - 34310346
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||| ||||    
T  34310279 aagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagttttaaaaaaa 34310346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 38631039 - 38630979
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  38631039 aagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagtttt 38630979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 9659371 - 9659304
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||| ||||||| |||||||| ||||    
T  9659371 aagtggacggtgggattggtcccttcggattagttgattcttggatgggataccgagttttaaaaaaa 9659304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 22693072 - 22693139
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  22693072 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 22693139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 35425150 - 35425203
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  35425150 aagtgggcggtgggattggtcctctcggattagtcgattcttggatcggatacc 35425203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8484721 - 8484661
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  8484721 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 18207344 - 18207404
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  18207344 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 19456271 - 19456211
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  19456271 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 27498791 - 27498731
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  27498791 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 37495191 - 37495251
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  37495191 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 37495251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 41351164 - 41351104
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  41351164 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 11926553 - 11926494
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  11926553 ggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 11926494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 13659305 - 13659243
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| ||||||||||| |||  |||||||||||||||||||||||||||||| | ||||||    
T  13659305 aagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaattttaa 13659243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 27487614 - 27487552
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||  ||||||||    
T  27487614 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagttttaa 27487552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 33709563 - 33709510
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||||||||||    
T  33709563 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatacc 33709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 4603914 - 4603974
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  4603914 aagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 4603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 7085686 - 7085626
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  7085686 aagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 10869625 - 10869565
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||| ||||||||||||||||| ||||||    
T  10869625 aagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagtttt 10869565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 23270579 - 23270515
Alignment:
Q  21 tggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||||||||||||||||  |||||||| | ||||||||||| ||||||| |||||||| ||||    
T  23270579 tggacggtgggattggtcccctcggattagttgattcttggattggataccaagttttaaaaaaa 23270515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 30485965 - 30486025
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| || |||||||||||||||||| ||||||    
T  30485965 aagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 10631340 - 10631289
Alignment:
Q  27 gtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10631289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 25750665 - 25750606
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||| ||||||||| ||| ||||| ||||||||||||||||||||| |||||||| ||||    
T  25750665 ggtgagattggtcccttcagattagtcgattcttggatcggataccgagttttaaaaaaa 25750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 19145472 - 19145410
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| |||||||||||||||  |||||||| | | ||||||||||||||||| ||||||||    
T  19145472 aagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagttttaa 19145410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 38684351 - 38684397
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||||||||||||  |||||||| |||||||||||||||||||||    
T  38684351 cggtgggattggtcccctcggattagtcgattcttggatcggatacc 38684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 5049276 - 5049333
Alignment:
Q  21 tggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||||||  ||| |||| ||||||||||||||| ||||| ||||||    
T  5049276 tggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 15641165 - 15641106
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  15641165 aagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 32059500 - 32059440
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  32059500 aagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 32059440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 42193620 - 42193671
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 69  Q
    |||||| ||||||| |||||||| |||||||| |||||||||||||| ||||    
T  42193620 aagtgggcggtggggttggtcctctcggattagtcgattcttggatcagata 42193671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 5067398 - 5067447
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcgga 67  Q
    |||||| |||||||||||||||  || ||||| |||||||||||||||||    
T  5067398 aagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 11464960 - 11464915
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||||    
T  11464960 ggtgggattggtcccctcgaattagtcgattcttggatcggatacc 11464915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 25548587 - 25548534
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||| | ||| |||| ||||||||||||||| ||||| ||||||    
T  25548587 cggtgggattggtcatctcgaattagtcgattcttggatcgaataccgagtttt 25548534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 28614543 - 28614486
Alignment:
Q  21 tggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||| |||  ||| |||| |||||| |||||||||||||| ||||||    
T  28614543 tggacggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 930546 - 930478
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    |||||||| ||| |||||||||  |||||||| ||| | ||||||||||||| | |||||||| |||||    
T  930546 aagtggacagtgtgattggtcccctcggattagtcggtccttggatcggatatcgagttttaaaaaaat 930478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 13038515 - 13038463
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||| ||||||||||| |||  ||| |||| ||||||||||||||||||||    
T  13038515 aagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 13108510 - 13108458
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||| ||||||||||| |||  ||| |||| ||||||||||||||||||||    
T  13108510 aagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 22392825 - 22392885
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||| ||||||||  || ||||| |||||| |||||||||||||| ||||||    
T  22392825 aagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagtttt 22392885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38086413 - 38086361
Alignment:
Q  19 agtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    ||||||||||||||||||||| |||  |||| ||| |||||||||| ||||||    
T  38086413 agtggacggtgggattggtcccttcaaattagtcggttcttggatcagatacc 38086361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 23639761 - 23639821
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  23639761 aagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 23645419 - 23645479
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  23645419 aagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 51595159 - 51595221
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    ||||||||||||| |||| ||  ||||||||||||||||||||||||||||||| ||||||||    
T  51595159 aagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagttttaa 51595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 5609262 - 5609202
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  5609262 aagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 34723944 - 34723996
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  34723944 ggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 34844818 - 34844758
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34844818 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 40058912 - 40058852
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  40058912 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 45787764 - 45787704
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  45787764 aagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 52983756 - 52983815
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 77  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||    
T  52983756 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 43719148 - 43719094
Alignment:
Q  17 aaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    ||||||| |||||||||||||| | |||||||| |||||||||||||||||||||    
T  43719148 aaagtgggcggtgggattggtcatctcggattagtcgattcttggatcggatacc 43719094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 52494625 - 52494687
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||||    
T  52494625 aagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaa 52494687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 19660592 - 19660532
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  19660592 aagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 19660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 27528855 - 27528795
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||| |||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  27528855 aagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagtttt 27528795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 32986334 - 32986394
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||||| || ||||||||||||||||||||| ||||||    
T  32986334 aagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 33696339 - 33696271
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    |||||| ||||| |||||||||| |||||||| || |||||||||||||||| | |||||||| |||||    
T  33696339 aagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagttttaaaaaaat 33696271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 12824537 - 12824604
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||||||||||||||||||   ||| |||| ||||||||||||||||||||  |||||||| ||||    
T  12824537 aagtggacggtgggattggtctcatcgaattagtcgattcttggatcggatacggagttttaaaaaaa 12824604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 33289191 - 33289258
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||||||||| |||| ||||  |||||||| |||||||||||||||||||||  ||||||| ||||    
T  33289191 aagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggttttaaaaaaa 33289258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 30879226 - 30879173
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||||||||||||||||| |  || |||||||||||||||||||| ||||||    
T  30879226 aagtggacggtgggattggttccctcagattaatcgattcttggatcagatacc 30879173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 32942507 - 32942552
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggat 63  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||    
T  32942507 aagtggacggtgggattggtcccctcggataaatcgattcttggat 32942552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 37302624 - 37302677
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| || |||||||||||| ||||||||| |||||||||| ||||||||||    
T  37302624 aagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggatacc 37302677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 55961814 - 55961761
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| ||||||||||||| | |||||||||||||||||||| |||| |||||    
T  55961814 aagtgggcggtgggattggttccttcggattaatcgattcttgaatcgaatacc 55961761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 9978569 - 9978509
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| | ||||||| ||||||||||| ||||||    
T  9978569 aagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 13871325 - 13871369
Alignment:
Q  27 gtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||    
T  13871325 gtgggattggtccttttggattagtcgattcttagatcggatacc 13871369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 35229312 - 35229372
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||||||||||||  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  35229312 cggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 35229372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 44343651 - 44343711
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||| |||| |||||||||| |||||||||| ||||||    
T  44343651 aagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagtttt 44343711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 46714530 - 46714590
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| || ||||||| |||||||||| ||||||    
T  46714530 aagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 4064997 - 4065048
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggata 69  Q
    |||||| |||||||||||||||  |||||||| |||||| ||||||||||||    
T  4064997 aagtgggcggtgggattggtcccctcggattagtcgatttttggatcggata 4065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 7093508 - 7093575
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| ||||||||||||||| |||| |||| ||| | ||||||||||||| | |||||||| ||||    
T  7093508 aagtgggcggtgggattggtcccttcgaattagtcggtccttggatcggatatcgagttttaaaaaaa 7093575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 20566487 - 20566554
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| || ||||||||||||  || ||||| ||||||||||||||||||| | |||||||| ||||    
T  20566487 aagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagttttaaaaaaa 20566554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 20078044 - 20077986
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtt 76  Q
    |||||| |||||||||| || |  |||||||| ||||||||||||||||||||| ||||    
T  20078044 aagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 37172909 - 37172955
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    ||||| ||||| ||||||||||||| ||||| |||||||||||||||    
T  37172909 cggtgagattgatcctttcggattagtcgatccttggatcggatacc 37172955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 25852362 - 25852419
Alignment:
Q  28 tgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||  |||||||| ||| |||||||| |||||||| |||||||| ||||    
T  25852362 tgggattggtcccctcggattagtcggttcttggaccggataccgagttttaaaaaaa 25852419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 51535758 - 51535811
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| |||||||||||||||  ||| |||| ||||||||| |||||||||||    
T  51535758 aagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggatacc 51535811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 23131496 - 23131436
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||| ||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  23131496 aagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagtttt 23131436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 27574455 - 27574507
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||| ||||| | |||||||  ||||||||||| |||||||||||||||||    
T  27574455 aagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatac 27574507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 32990572 - 32990624
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||| |||||||||||||||  ||||| || ||||||||||||||| ||||    
T  32990572 aagtgggcggtgggattggtcccctcggactagtcgattcttggatcgaatac 32990624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 36131570 - 36131510
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||| || |||| |||||| ||||||    
T  36131570 aagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagtttt 36131510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 54127402 - 54127350
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||| |||||||||||||||  |||||||| ||| |||||||| |||||||    
T  54127402 aagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatac 54127350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 55158395 - 55158343
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||  |||||||| |||||| |||||||||| ||| ||||||    
T  55158395 ggtgggattggtcccctcggattagtcgatttttggatcggaaaccgagtttt 55158343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 10083879 - 10083819
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  10083879 aagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 10190802 - 10190742
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  10190802 aagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 4048087 - 4048154
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||||||||||  |||||||| | ||||||||||||||||||| |||||||| ||||    
T  4048087 aagtggacggtgggattggtcccctcggattagttgattcttggatcggataccgagttttaaaaaaa 4048154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 21363080 - 21363147
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| ||||||||||||| |  |||||||||||||||||||||||||||||| |||||||| ||||    
T  21363080 aagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagttttaaaaaaa 21363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 24407398 - 24407465
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  24407398 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 24407465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 49258322 - 49258255
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  49258322 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 49258255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 52821696 - 52821634
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||    
T  52821696 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaa 52821634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8097339 - 8097279
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  8097339 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 26174250 - 26174310
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  26174250 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 48105014 - 48105082
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    |||||| ||||| ||||||||| ||||||||| ||||||||||||||||||||| ||||| || |||||    
T  48105014 aagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagtttaaaaaaaat 48105082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 53848494 - 53848434
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  53848494 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 18176947 - 18176880
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||  |||||||| ||||    
T  18176947 aagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagttttaaaaaaa 18176880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 39041904 - 39041845
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  39041904 ggtgggattggtccactcggattagtcgattcttggatcggataccgagttttaaaaaaa 39041845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 7485590 - 7485529
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||    
T  7485590 aagtggccggtgggattggtccct-cggattagtcgattcttggatcggataccgagttttaa 7485529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 53424230 - 53424177
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  53424230 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 4252456 - 4252404
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    ||||||||||||||||||||||  |||||||| ||||| ||||||||||||||    
T  4252456 aagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8958095 - 8958035
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  || |||||||||||||||||||| |||||| ||||||    
T  8958095 aagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagtttt 8958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 15566560 - 15566500
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  || ||||| ||||||||||||||||||||| ||||||    
T  15566560 aagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 24165775 - 24165715
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  24165775 aagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagtttt 24165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 40133509 - 40133449
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  40133509 aagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 50731297 - 50731233
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaata 82  Q
    |||||| |||||||||||||||  || ||||| ||||| ||||||||||||||| ||||||||||    
T  50731297 aagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaata 50731233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 50781557 - 50781621
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaata 82  Q
    |||||| |||||||||||||||  || ||||| ||||| ||||||||||||||| ||||||||||    
T  50781557 aagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagttttaata 50781621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 35493048 - 35493115
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||| | ||||| |||||||| ||||    
T  35493048 aagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagttttaaaaaaa 35493115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 54475818 - 54475885
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  | |||||| |||||||||||||| |||||| |||||||| ||||    
T  54475818 aagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagttttaaaaaaa 54475885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 25379905 - 25379950
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||    
T  25379905 cggtgggattggtcccctcggattagtcgattcttggatcggatac 25379950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 30257761 - 30257814
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||| |||||| ||||||||  |||||||| |||||||||||||||||||||    
T  30257761 aagtgggcggtggcattggtcccctcggattagtcgattcttggatcggatacc 30257814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 3747730 - 3747778
Alignment:
Q  30 ggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3747778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8456210 - 8456150
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| | |||||||||||||  |||||||| |||||||||| |||||||||| ||||||    
T  8456210 aagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 25289774 - 25289715
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||||||| | || |||| ||||||||||||||||||||| ||||||    
T  25289774 aagtgggcggtgggattggtccct-cgaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 30807212 - 30807153
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||| |||||||||| | ||||||| ||||||||||||||||||||| ||||||    
T  30807212 aagtgggcggtaggattggtccct-cggattagtcgattcttggatcggataccgagtttt 30807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 32151561 - 32151621
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||| |||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  32151561 aagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 34492635 - 34492575
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||||||| ||| ||||| | |||||||||||| |||||| ||||||    
T  34492635 aagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 45272476 - 45272416
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| | || |||||||||||||||| ||||||    
T  45272476 aagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagtttt 45272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 45529814 - 45529755
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  45529814 aagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 46576485 - 46576545
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||| ||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  46576485 aagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagtttt 46576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 48977525 - 48977585
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  48977525 aagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 48977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 52455701 - 52455649
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||  |||||||| ||||||||||||| ||||||| ||||||    
T  52455701 ggtgggattggtcccctcggattagtcgattcttggattggataccgagtttt 52455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 53233970 - 53233911
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  53233970 aagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 55371354 - 55371302
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||| |||||||||||||||  |||||||| ||||| ||||||||||||||    
T  55371354 aagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 25017626 - 25017692
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| ||||||||||||| | || |||||| ||||||||||||||| ||||| |||||||| ||||    
T  25017626 aagtgggcggtgggattggttcctt-ggattagtcgattcttggatcgaataccgagttttaaaaaaa 25017692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 33398528 - 33398461
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| ||||||||||||| |  ||| |||| ||||||||||||||||||||| | |||||| ||||    
T  33398528 aagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaattttaaaaaaa 33398461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 1178310 - 1178367
Alignment:
Q  20 gtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||| ||||||||||||||| | ||||||| |||| |||||||||||||||| ||||||    
T  1178310 gtgggcggtgggattggtccct-cggattagtcgaatcttggatcggataccgagtttt 1178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 4462769 - 4462831
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaa 80  Q
    |||||||||||||||||| |||  |||||||| |  |||||||||| ||||||| ||||||||    
T  4462769 aagtggacggtgggattgatccactcggattagtttattcttggattggataccgagttttaa 4462831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 14997755 - 14997807
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||  ||| ||||||||||||||| ||| |||||| ||||||    
T  14997755 ggtgggattggtcccctcgaattaatcgattcttgtatcagataccgagtttt 14997807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 32094809 - 32094757
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||| ||  |||| ||| ||||||||||||||||| ||||||    
T  32094809 ggtgggattggtcctctcatattagtcggttcttggatcggataccgagtttt 32094757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 7369 - 7302
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  7369 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttaaaaaaa 7302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 21603371 - 21603438
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  21603371 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 21603438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2639471 - 2639411
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  2639471 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 4718786 - 4718846
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  4718786 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8765586 - 8765526
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  8765586 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 28193615 - 28193683
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||| || |||||    
T  28193615 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttaaaaaaaat 28193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 34237708 - 34237655
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  34237708 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 2618327 - 2618387
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||||||| || ||||||    
T  2618327 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 10292195 - 10292255
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||||||| ||||||||| | ||||||||||||| ||||| ||||||    
T  10292195 aagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 14633095 - 14633155
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  | |||||| ||||||||||||||||||||| ||||||    
T  14633095 aagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagtttt 14633155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 32879420 - 32879480
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||| ||||||| ||||||    
T  32879420 aagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagtttt 32879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 33747023 - 33747083
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||| |||||| || |||||||| ||||| ||||||||||||||| ||||||    
T  33747023 aagtggacggtggaattggttctctcggattagtcgatccttggatcggataccgagtttt 33747083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 39349397 - 39349457
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||    
T  39349397 aagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 42328145 - 42328205
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||| ||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  42328145 aagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 42328205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 3734674 - 3734623
Alignment:
Q  27 gtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  3734674 gtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 18128654 - 18128721
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||| || ||||| ||| ||||||||||| ||||| |||||||| ||||    
T  18128654 aagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagttttaaaaaaa 18128721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 42643178 - 42643117
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttta 79  Q
    |||||| |||||||||||||||  ||| |||| | ||||||||||||||||||| |||||||    
T  42643178 aagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttta 42643117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 6953060 - 6953001
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||| | ||||||| ||||||||||||||| ||||| |||||||| ||||    
T  6953060 cggtgggattggtccct-cggattagtcgattcttggatcgaataccgagttttaaaaaaa 6953001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 20306049 - 20306109
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  20306049 aagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 20306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 21092682 - 21092742
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  21092682 aagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagtttt 21092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 7558011 - 7557952
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 77  Q
    ||||||||||||||||||||||  ||| |||| |||||| ||| |||||||||| |||||    
T  7558011 aagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 20470058 - 20470124
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| ||||||||||||| | | ||||||| |||||| |||||||||||||| |||||||| ||||    
T  20470058 aagtgggcggtgggattggttcct-cggattagtcgatttttggatcggataccgagttttaaaaaaa 20470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 25248488 - 25248554
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| |||||| || ||||||||||| |||||||| ||||    
T  25248488 aagtgggcggtgggattggtcccctcggattagtcgatt-tttgatcggataccgagttttaaaaaaa 25248554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 9713609 - 9713655
Alignment:
Q  32 attggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  9713609 attggtccactcggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 4698776 - 4698723
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||  |||||||| ||||||| ||||| ||||||| ||||||    
T  4698776 cggtgggattggtcccctcggattagtcgattcatggattggataccgagtttt 4698723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 19471751 - 19471811
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| || ||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  19471751 aagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19471811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 19542675 - 19542735
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| || ||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  19542675 aagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19542735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 19590021 - 19589961
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| || ||||||||||||  ||| |||| ||||| ||||||||||||||| ||||||    
T  19590021 aagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagtttt 19589961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 33534627 - 33534567
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||  ||||||||||||| ||||||||| ||| | |||||||||| |||| ||||||    
T  33534627 aagtggatcgtgggattggtcccttcggattagtcggtccttggatcggttaccgagtttt 33534567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 34610747 - 34610687
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||| | ||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  34610747 aagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 34639268 - 34639208
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||| |||||||||| |||| |||||||| | |||| || ||||||| ||||||    
T  34639268 aagtggacggtaggattggtcccttcgaattaatcggtccttgaattggataccaagtttt 34639208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 16374138 - 16374195
Alignment:
Q  21 tggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  16374138 tggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 16374195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 7275418 - 7275478
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  7275418 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 22120029 - 22120089
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  22120029 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 31712962 - 31712902
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  31712962 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 40542970 - 40542910
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  40542970 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 3851898 - 3851965
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| ||||||||||| |||  |||||||| ||||||||||||||||||||| |||||||| ||||    
T  3851898 aagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttaaaaaaa 3851965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 17197010 - 17196943
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| |||||||| ||||    
T  17197010 aagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttaaaaaaa 17196943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 2751419 - 2751472
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  2751419 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 23092240 - 23092297
Alignment:
Q  21 tggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||||||  |||||||| ||||||| ||||||||||||| ||||||    
T  23092240 tggacggtgggattggtcccctcggattagtcgattcatggatcggataccgagtttt 23092297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 27009499 - 27009568
Alignment:
Q  16 caaagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||||||||||||  ||  |||| ||||||||||||| ||||||| |||||||| ||||    
T  27009499 caaagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagttttaaaaaaa 27009568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 654765 - 654705
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||| ||||||||||||||||| ||||||    
T  654765 aagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 7175922 - 7175870
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatac 70  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||||    
T  7175922 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatac 7175870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 11997990 - 11998050
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  ||| |||| ||||||||||||||||||||| ||||||    
T  11997990 aagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 21835292 - 21835352
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||||||||||||| | ||||||    
T  21835292 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 22703627 - 22703687
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  22703627 aagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagtttt 22703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 27312293 - 27312353
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  || ||||| ||||||||||||||||||||| ||||||    
T  27312293 aagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagtttt 27312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 42913573 - 42913513
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  |||||||| | ||||||| ||||||||||| ||||||    
T  42913573 aagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagtttt 42913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 39145712 - 39145645
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||||||||||||||||||||  ||| |||| |||||||||| ||| |||||| |||||||| ||||    
T  39145712 aagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagttttaaaaaaa 39145645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 36772362 - 36772296
Alignment:
Q  19 agtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||| |||||| ||| ||||| |||||||| ||||||||| ||||||||||| |||||||| ||||    
T  36772362 agtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagttttaaaaaaa 36772296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 22696473 - 22696530
Alignment:
Q  29 gggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    |||||||||||| |||||||| ||| | ||||||||||||||| |||||||| |||||    
T  22696473 gggattggtcctctcggattagtcggtccttggatcggataccgagttttaaaaaaat 22696530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 21217893 - 21217833
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| |||  |||||||| | ||||||||||||||||||| ||||||    
T  21217893 aagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 25102864 - 25102816
Alignment:
Q  23 gacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    ||||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  25102864 gacggtgggattggttccttcggattagtcgattcttggatcagatacc 25102816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 28089960 - 28090020
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| || || |||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  28089960 aagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagtttt 28090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 31197731 - 31197791
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  || ||||| ||||||||||||||||||| | ||||||    
T  31197731 aagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 31197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 18044256 - 18044315
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||| ||||||||  || ||||| ||||||||||||||||||||| |||||||| ||||    
T  18044256 ggtggaattggtcccctcagattagtcgattcttggatcggataccgagttttaaaaaaa 18044315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 25333544 - 25333610
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| | |||||||||||||  |||||||| ||||||||||||||||| ||| |||||||| ||||    
T  25333544 aagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagttttaaaaaaa 25333610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 32849732 - 32849791
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttt 77  Q
    |||||| | |||||||||||||  || ||||| ||||||||||||||||||||| |||||    
T  32849732 aagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 2344447 - 2344500
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||  |||||||| ||| | ||||||||||||||| ||||||    
T  2344447 cggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 2344500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 17212202 - 17212247
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    ||||||||||||||  |||||||| |||||||||||||| ||||||    
T  17212202 ggtgggattggtcccctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 43785359 - 43785306
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||||||||||| |||||||||  | |||||| |||||| ||||||||||||||    
T  43785359 aagtggacggtgagattggtccccttggattagtcgatttttggatcggatacc 43785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 22643402 - 22643342
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||| |||| ||||  |||||||||||||||||| |||| |||||| ||||||    
T  22643402 aagtggccggtgtgattagtcccctcggattaatcgattctttgatcagataccaagtttt 22643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 29861811 - 29861871
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||| |||  ||| |||| ||||||||| ||||||||||| ||||||    
T  29861811 aagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagtttt 29861871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 36395496 - 36395540
Alignment:
Q  27 gtgggattggtcctttcggattaatcgattcttggatcggatacc 71  Q
    |||| ||||||||| |||||||| ||||||||||||| |||||||    
T  36395496 gtggaattggtcctctcggattagtcgattcttggattggatacc 36395540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 41907547 - 41907507
Alignment:
Q  45 gattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    ||||| ||||||||||||||||||||| |||||||| ||||    
T  41907547 gattagtcgattcttggatcggataccgagttttaaaaaaa 41907507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 5135 - 5082
Alignment:
Q  25 cggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  5135 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8511 - 8451
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  8511 aagtgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 39229 - 39289
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  39229 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 39289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 40462 - 40521
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||    
T  40462 aagtgggcggtgggattggtccct-cggattagtcgattcttggatcggataccgagtttt 40521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 123117 - 123058
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaat 86  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| |||||||| |||||    
T  123117 ggtgggattggtcccctcggattaatcgat-cttggatcggataccaagttttaaaaaaat 123058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 161946 - 162006
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||||| |||||||||||||||  |||||||| |||||||||||||| |||||| ||||||    
T  161946 aagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 162006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 13107 - 13040
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||||||||||||||| |||  || ||||| | ||||||||||||||||||| |||||||| ||||    
T  13107 aagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagttttaaaaaaa 13040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 66891 - 66958
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||  |||||||| ||| | ||||||||||||||| |||||||| ||||    
T  66891 aagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttaaaaaaa 66958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 52929 - 52871
Alignment:
Q  20 gtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    |||| |||| ||||||||||| |||||||| |||||||||| |||||||||| ||||||    
T  52929 gtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagtttt 52871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 1116 - 1057
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  1116 aagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 9359 - 9300
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||||||    
T  9359 aagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 9300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 97426 - 97359
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagttttaataaaa 85  Q
    |||||| |||||||||||||||| ||| |||| ||| || ||||| |||||||| |||||||| ||||    
T  97426 aagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagttttaaaaaaa 97359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 10754 - 10695
Alignment:
Q  18 aagtggacggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||||||||||  ||| |||| || |||||| ||||||||||| ||||||    
T  10754 aagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccgagtttt 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 32433 - 32484
Alignment:
Q  26 ggtgggattggtcctttcggattaatcgattcttggatcggatacctagtttt 78  Q
    ||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||    
T  32433 ggtgggattggtcccctcggattagtcgattctt-gatcggataccgagtttt 32484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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