View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3101_low_24 (Length: 272)

Name: NF3101_low_24
Description: NF3101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3101_low_24
NF3101_low_24
[»] chr2 (42 HSPs)
chr2 (2-161)||(9787563-9787722)
chr2 (2-164)||(22191046-22191209)
chr2 (1-164)||(11175907-11176071)
chr2 (3-164)||(6763859-6764021)
chr2 (1-164)||(25298941-25299104)
chr2 (1-164)||(4587860-4588025)
chr2 (1-161)||(2986689-2986850)
chr2 (1-169)||(15735059-15735228)
chr2 (1-164)||(18537968-18538132)
chr2 (1-164)||(30714414-30714578)
chr2 (1-164)||(38716194-38716357)
chr2 (1-164)||(9051167-9051331)
chr2 (1-164)||(15700747-15700911)
chr2 (1-162)||(36464278-36464437)
chr2 (1-67)||(17368314-17368380)
chr2 (106-166)||(9787803-9787863)
chr2 (18-164)||(43301657-43301802)
chr2 (111-166)||(17368465-17368520)
chr2 (1-80)||(22387208-22387287)
chr2 (1-95)||(28365581-28365674)
chr2 (1-98)||(331779-331877)
chr2 (1-95)||(2190605-2190697)
chr2 (1-137)||(26829229-26829362)
chr2 (106-162)||(22191291-22191347)
chr2 (1-97)||(25884317-25884413)
chr2 (1-77)||(1020478-1020554)
chr2 (109-165)||(15735312-15735368)
chr2 (106-164)||(18537829-18537887)
chr2 (106-164)||(30714275-30714333)
chr2 (107-165)||(38716439-38716497)
chr2 (1-77)||(4104964-4105040)
chr2 (55-97)||(15147813-15147854)
chr2 (106-164)||(25884178-25884236)
chr2 (106-151)||(25298814-25298859)
chr2 (106-166)||(9051026-9051086)
chr2 (106-141)||(2986932-2986967)
chr2 (5-71)||(33199546-33199613)
chr2 (106-164)||(11176153-11176211)
chr2 (31-77)||(12350101-12350146)
chr2 (106-164)||(15700992-15701050)
chr2 (1-89)||(2123450-2123539)
chr2 (115-163)||(25884434-25884482)
[»] chr3 (74 HSPs)
chr3 (1-164)||(26628165-26628329)
chr3 (1-164)||(27852891-27853055)
chr3 (1-164)||(48907432-48907595)
chr3 (1-161)||(23428759-23428920)
chr3 (1-166)||(3328953-3329119)
chr3 (1-164)||(8542610-8542774)
chr3 (1-170)||(8339080-8339250)
chr3 (1-164)||(13080894-13081058)
chr3 (1-164)||(30155285-30155447)
chr3 (1-164)||(25179578-25179742)
chr3 (1-164)||(10743409-10743571)
chr3 (1-166)||(22500735-22500900)
chr3 (1-161)||(22447880-22448045)
chr3 (1-161)||(4521957-4522118)
chr3 (1-137)||(28173869-28174006)
chr3 (5-165)||(46673192-46673351)
chr3 (1-151)||(25022803-25022951)
chr3 (1-164)||(3780883-3781042)
chr3 (1-166)||(48860702-48860866)
chr3 (1-164)||(26633499-26633659)
chr3 (1-86)||(28155022-28155107)
chr3 (16-164)||(40836334-40836482)
chr3 (31-96)||(20001778-20001843)
chr3 (1-164)||(22416333-22416498)
chr3 (13-162)||(4775852-4776003)
chr3 (1-168)||(25336354-25336520)
chr3 (2-86)||(34878670-34878754)
chr3 (6-151)||(33279729-33279875)
chr3 (5-98)||(9496361-9496452)
chr3 (106-164)||(26628025-26628083)
chr3 (106-164)||(28154882-28154940)
chr3 (1-96)||(26127046-26127139)
chr3 (106-164)||(22447740-22447798)
chr3 (111-164)||(32960645-32960698)
chr3 (1-164)||(1743255-1743413)
chr3 (13-164)||(36311152-36311303)
chr3 (106-164)||(3328813-3328871)
chr3 (1-96)||(26177096-26177189)
chr3 (106-166)||(27852751-27852811)
chr3 (20-171)||(49657939-49658087)
chr3 (106-169)||(22500591-22500654)
chr3 (30-97)||(46387743-46387809)
chr3 (106-164)||(34878529-34878587)
chr3 (2-98)||(35201136-35201231)
chr3 (106-151)||(6927715-6927760)
chr3 (106-167)||(8338937-8338998)
chr3 (53-137)||(32960803-32960887)
chr3 (14-80)||(32315004-32315071)
chr3 (106-164)||(28173729-28173787)
chr3 (32-98)||(33105008-33105073)
chr3 (106-151)||(13081140-13081185)
chr3 (106-163)||(23428620-23428677)
chr3 (53-164)||(3820917-3821025)
chr3 (32-95)||(18388871-18388933)
chr3 (106-164)||(25179821-25179879)
chr3 (106-164)||(26723904-26723962)
chr3 (106-164)||(46673045-46673103)
chr3 (1-42)||(6927593-6927634)
chr3 (106-167)||(26722530-26722591)
chr3 (1-42)||(32960782-32960823)
chr3 (41-80)||(23320446-23320484)
chr3 (31-86)||(31039148-31039202)
chr3 (11-77)||(34296529-34296596)
chr3 (39-98)||(43668507-43668565)
chr3 (106-144)||(20001954-20001992)
chr3 (13-98)||(27668139-27668223)
chr3 (1-30)||(9662387-9662416)
chr3 (107-164)||(19984849-19984906)
chr3 (106-151)||(30155158-30155203)
chr3 (106-163)||(40836181-40836238)
chr3 (109-154)||(44457445-44457490)
chr3 (106-166)||(4776064-4776124)
chr3 (108-144)||(5001220-5001256)
chr3 (116-164)||(48860930-48860978)
[»] chr7 (77 HSPs)
chr7 (1-166)||(42271331-42271496)
chr7 (1-163)||(2331015-2331177)
chr7 (1-164)||(20636619-20636783)
chr7 (1-164)||(20638491-20638655)
chr7 (1-166)||(19195353-19195519)
chr7 (1-166)||(36746643-36746808)
chr7 (1-161)||(27869335-27869496)
chr7 (1-164)||(21224492-21224656)
chr7 (1-166)||(24597655-24597821)
chr7 (1-154)||(35337662-35337815)
chr7 (1-164)||(48176103-48176266)
chr7 (1-154)||(41452389-41452543)
chr7 (1-161)||(3562573-3562733)
chr7 (1-167)||(17305761-17305928)
chr7 (1-161)||(18754406-18754567)
chr7 (1-164)||(31493911-31494074)
chr7 (1-164)||(19919743-19919905)
chr7 (1-164)||(11843318-11843481)
chr7 (1-164)||(8526796-8526959)
chr7 (1-164)||(13577926-13578088)
chr7 (1-164)||(21225688-21225849)
chr7 (5-80)||(44078015-44078090)
chr7 (1-87)||(10023924-10024010)
chr7 (1-164)||(14624608-14624766)
chr7 (1-165)||(10655329-10655493)
chr7 (13-168)||(25002707-25002859)
chr7 (1-98)||(4571483-4571579)
chr7 (13-96)||(24464646-24464728)
chr7 (1-80)||(26126339-26126418)
chr7 (1-98)||(39182004-39182098)
chr7 (1-95)||(4193621-4193714)
chr7 (1-164)||(26385263-26385425)
chr7 (106-171)||(31494156-31494221)
chr7 (16-95)||(3403206-3403286)
chr7 (1-164)||(9157190-9157350)
chr7 (1-68)||(39440260-39440328)
chr7 (1-94)||(5111512-5111603)
chr7 (21-80)||(6798074-6798133)
chr7 (20-80)||(15681682-15681743)
chr7 (5-73)||(24448187-24448256)
chr7 (1-74)||(15681720-15681794)
chr7 (106-164)||(19195214-19195272)
chr7 (106-164)||(21690416-21690474)
chr7 (53-164)||(6650544-6650653)
chr7 (106-164)||(48175962-48176021)
chr7 (106-164)||(8527040-8527098)
chr7 (106-164)||(11843178-11843236)
chr7 (106-164)||(20636864-20636922)
chr7 (106-164)||(21224354-21224411)
chr7 (1-98)||(23439660-23439758)
chr7 (106-164)||(27869196-27869254)
chr7 (17-161)||(33237569-33237713)
chr7 (106-164)||(39182179-39182237)
chr7 (106-164)||(42271578-42271636)
chr7 (115-164)||(2331273-2331322)
chr7 (106-151)||(3562446-3562491)
chr7 (5-80)||(3769489-3769564)
chr7 (2-80)||(43251349-43251428)
chr7 (109-151)||(5490924-5490966)
chr7 (3-95)||(19493391-19493481)
chr7 (106-164)||(24597517-24597575)
chr7 (1-57)||(9822239-9822296)
chr7 (1-57)||(10724164-10724221)
chr7 (5-80)||(3148008-3148084)
chr7 (106-166)||(10655575-10655634)
chr7 (106-162)||(13577789-13577845)
chr7 (111-163)||(17306016-17306067)
chr7 (106-146)||(26385507-26385547)
chr7 (1-151)||(7365234-7365387)
chr7 (1-80)||(29051704-29051782)
chr7 (13-74)||(6798034-6798095)
chr7 (34-80)||(15093922-15093968)
chr7 (108-166)||(15681878-15681936)
chr7 (106-172)||(24448037-24448103)
chr7 (106-151)||(19919617-19919662)
chr7 (108-145)||(34174028-34174065)
chr7 (1-77)||(47113202-47113279)
[»] chr6 (54 HSPs)
chr6 (1-164)||(4597545-4597709)
chr6 (1-164)||(24051009-24051172)
chr6 (1-165)||(26710447-26710612)
chr6 (1-164)||(18791358-18791521)
chr6 (1-150)||(15298500-15298649)
chr6 (1-164)||(32451726-32451890)
chr6 (1-165)||(24603360-24603525)
chr6 (1-164)||(31210794-31210958)
chr6 (1-164)||(14572318-14572480)
chr6 (1-166)||(25819683-25819848)
chr6 (2-164)||(34833925-34834088)
chr6 (1-164)||(8412758-8412922)
chr6 (1-164)||(22968295-22968457)
chr6 (1-164)||(23819936-23820098)
chr6 (13-163)||(4013818-4013968)
chr6 (32-166)||(18749299-18749434)
chr6 (2-164)||(32682419-32682580)
chr6 (1-86)||(35102631-35102716)
chr6 (5-151)||(3118694-3118839)
chr6 (1-165)||(22269409-22269570)
chr6 (1-98)||(4370965-4371062)
chr6 (1-95)||(19282351-19282445)
chr6 (1-74)||(18749236-18749309)
chr6 (13-95)||(26240025-26240109)
chr6 (31-164)||(2058992-2059124)
chr6 (1-86)||(9241732-9241816)
chr6 (13-95)||(16415482-16415564)
chr6 (1-144)||(34528172-34528312)
chr6 (106-169)||(25819930-25819993)
chr6 (5-98)||(12427298-12427392)
chr6 (106-160)||(14572182-14572236)
chr6 (106-164)||(18749097-18749155)
chr6 (1-170)||(24615834-24615999)
chr6 (106-164)||(32451972-32452030)
chr6 (106-164)||(35102491-35102549)
chr6 (106-151)||(4597418-4597463)
chr6 (1-61)||(12291557-12291618)
chr6 (106-154)||(15298730-15298778)
chr6 (110-164)||(35102713-35102767)
chr6 (109-164)||(3118926-3118981)
chr6 (106-165)||(8415294-8415353)
chr6 (106-153)||(12291428-12291475)
chr6 (106-145)||(18791603-18791642)
chr6 (111-164)||(4013691-4013742)
chr6 (107-165)||(19176798-19176856)
chr6 (108-170)||(27322113-27322174)
chr6 (1-77)||(2636865-2636941)
chr6 (107-164)||(6842327-6842384)
chr6 (1-30)||(20863868-20863897)
chr6 (53-98)||(20863889-20863934)
chr6 (1-30)||(23124860-23124889)
chr6 (108-145)||(27318333-27318370)
chr6 (1-94)||(14195631-14195724)
chr6 (123-151)||(32682386-32682414)
[»] chr4 (56 HSPs)
chr4 (1-164)||(13397815-13397979)
chr4 (1-164)||(43793771-43793934)
chr4 (7-164)||(41877172-41877328)
chr4 (1-166)||(25011733-25011899)
chr4 (1-164)||(5304487-5304649)
chr4 (1-164)||(9195804-9195966)
chr4 (3-164)||(35475291-35475451)
chr4 (1-166)||(4357250-4357416)
chr4 (1-98)||(15058958-15059055)
chr4 (1-164)||(55780387-55780550)
chr4 (1-164)||(55844567-55844730)
chr4 (1-167)||(4433323-4433488)
chr4 (5-164)||(2931321-2931481)
chr4 (1-98)||(13826559-13826655)
chr4 (1-137)||(41034663-41034800)
chr4 (1-94)||(1588553-1588645)
chr4 (1-167)||(52838228-52838391)
chr4 (1-95)||(4098726-4098821)
chr4 (5-164)||(6789102-6789262)
chr4 (1-172)||(19232483-19232656)
chr4 (1-164)||(45633438-45633601)
chr4 (1-161)||(15734403-15734562)
chr4 (1-98)||(27018282-27018378)
chr4 (1-80)||(51291309-51291389)
chr4 (53-164)||(25618788-25618900)
chr4 (1-171)||(24626360-24626527)
chr4 (1-75)||(2715857-2715930)
chr4 (1-98)||(9397258-9397356)
chr4 (106-164)||(25011980-25012038)
chr4 (1-95)||(6209381-6209475)
chr4 (106-164)||(43793631-43793689)
chr4 (1-70)||(15795412-15795481)
chr4 (106-164)||(4433183-4433241)
chr4 (106-172)||(5304339-5304405)
chr4 (106-166)||(13394534-13394594)
chr4 (106-166)||(13397673-13397733)
chr4 (1-77)||(43336080-43336156)
chr4 (32-80)||(48158681-48158729)
chr4 (106-164)||(13826420-13826478)
chr4 (106-164)||(18259357-18259415)
chr4 (106-151)||(4357497-4357542)
chr4 (111-164)||(15058820-15058873)
chr4 (1-77)||(16291821-16291898)
chr4 (106-166)||(9397435-9397495)
chr4 (1-77)||(23362519-23362595)
chr4 (117-164)||(2931576-2931623)
chr4 (106-145)||(27018460-27018499)
chr4 (106-140)||(6319047-6319081)
chr4 (106-164)||(19232343-19232401)
chr4 (106-144)||(25618648-25618686)
chr4 (106-164)||(47869899-47869957)
chr4 (106-143)||(7035904-7035941)
chr4 (117-166)||(17138540-17138589)
chr4 (115-164)||(20919335-20919384)
chr4 (106-151)||(41034880-41034925)
chr4 (3-42)||(25618769-25618809)
[»] chr5 (50 HSPs)
chr5 (1-164)||(25557015-25557178)
chr5 (1-161)||(245599-245758)
chr5 (1-139)||(16901137-16901274)
chr5 (1-166)||(18695002-18695167)
chr5 (1-164)||(26639177-26639341)
chr5 (1-164)||(38408629-38408792)
chr5 (1-164)||(10379283-10379445)
chr5 (1-164)||(23765530-23765693)
chr5 (1-164)||(23815378-23815541)
chr5 (5-98)||(31055458-31055551)
chr5 (189-265)||(20124255-20124331)
chr5 (1-164)||(36641143-36641307)
chr5 (1-98)||(10293227-10293324)
chr5 (1-98)||(19169410-19169507)
chr5 (5-166)||(40428783-40428943)
chr5 (31-164)||(8645797-8645931)
chr5 (1-96)||(16307616-16307712)
chr5 (1-94)||(38476609-38476703)
chr5 (1-160)||(17704727-17704882)
chr5 (31-166)||(35302085-35302219)
chr5 (1-161)||(37961388-37961549)
chr5 (2-162)||(15885306-15885465)
chr5 (1-95)||(23040088-23040182)
chr5 (7-98)||(7835777-7835867)
chr5 (46-164)||(31648056-31648174)
chr5 (106-164)||(31055315-31055373)
chr5 (1-94)||(34125130-34125224)
chr5 (26-95)||(41663689-41663756)
chr5 (111-164)||(23765420-23765473)
chr5 (111-164)||(23815268-23815321)
chr5 (1-80)||(17825637-17825716)
chr5 (19-95)||(23040196-23040272)
chr5 (1-98)||(462834-462930)
chr5 (1-98)||(7187258-7187353)
chr5 (31-95)||(2373215-2373278)
chr5 (1-80)||(20653905-20653984)
chr5 (106-164)||(16900997-16901055)
chr5 (106-164)||(18695248-18695306)
chr5 (106-144)||(25556896-25556934)
chr5 (5-151)||(32465979-32466123)
chr5 (106-151)||(40428652-40428697)
chr5 (106-166)||(31576491-31576551)
chr5 (113-164)||(31648237-31648288)
chr5 (125-166)||(36641403-36641444)
chr5 (106-173)||(20654040-20654107)
chr5 (106-149)||(24025036-24025079)
chr5 (117-163)||(4800935-4800981)
chr5 (1-42)||(8673996-8674038)
chr5 (106-164)||(26639037-26639095)
chr5 (115-164)||(10379535-10379584)
[»] chr1 (55 HSPs)
chr1 (1-164)||(19078065-19078227)
chr1 (1-164)||(19125955-19126117)
chr1 (1-164)||(24961953-24962117)
chr1 (1-166)||(46432356-46432522)
chr1 (1-164)||(24196261-24196425)
chr1 (1-164)||(3616799-3616963)
chr1 (1-164)||(4059662-4059826)
chr1 (1-166)||(43706794-43706959)
chr1 (1-151)||(24749810-24749962)
chr1 (3-164)||(28920799-28920955)
chr1 (1-171)||(29676072-29676243)
chr1 (1-166)||(48472003-48472167)
chr1 (1-164)||(51719262-51719424)
chr1 (1-164)||(18606823-18606987)
chr1 (1-164)||(2657652-2657815)
chr1 (18-95)||(21148048-21148126)
chr1 (1-166)||(10684792-10684958)
chr1 (1-98)||(16551783-16551881)
chr1 (1-165)||(2425224-2425388)
chr1 (13-95)||(29182152-29182234)
chr1 (1-98)||(22786097-22786194)
chr1 (1-79)||(27092992-27093070)
chr1 (1-95)||(4455182-4455277)
chr1 (106-166)||(3617044-3617104)
chr1 (1-80)||(47685186-47685265)
chr1 (106-166)||(24962199-24962259)
chr1 (2-94)||(31084753-31084844)
chr1 (13-98)||(9387760-9387846)
chr1 (106-164)||(4059522-4059580)
chr1 (106-164)||(51719123-51719181)
chr1 (111-164)||(24750020-24750073)
chr1 (106-163)||(43706655-43706712)
chr1 (106-163)||(50334719-50334776)
chr1 (1-95)||(2260518-2260611)
chr1 (13-80)||(16971935-16972003)
chr1 (107-166)||(50334811-50334869)
chr1 (106-164)||(2425469-2425527)
chr1 (106-164)||(24196507-24196565)
chr1 (106-164)||(46432216-46432274)
chr1 (106-151)||(16551657-16551702)
chr1 (106-151)||(48471876-48471921)
chr1 (106-170)||(28552299-28552363)
chr1 (111-162)||(10685012-10685063)
chr1 (1-94)||(21185278-21185368)
chr1 (6-96)||(28750346-28750437)
chr1 (106-164)||(16972096-16972154)
chr1 (111-164)||(27092853-27092906)
chr1 (77-151)||(43914920-43914994)
chr1 (106-166)||(19077924-19077984)
chr1 (106-166)||(19125814-19125874)
chr1 (106-168)||(16878931-16878993)
chr1 (2-80)||(26605418-26605494)
chr1 (106-164)||(28919015-28919073)
chr1 (106-155)||(30105443-30105492)
chr1 (106-154)||(6285176-6285224)
[»] chr8 (52 HSPs)
chr8 (1-165)||(30784404-30784569)
chr8 (1-164)||(17648243-17648407)
chr8 (1-169)||(8802540-8802708)
chr8 (1-164)||(4519007-4519171)
chr8 (1-166)||(12723401-12723567)
chr8 (1-166)||(19924263-19924429)
chr8 (1-161)||(38630058-38630219)
chr8 (1-98)||(19391527-19391624)
chr8 (1-166)||(21666414-21666579)
chr8 (1-166)||(33895373-33895538)
chr8 (6-164)||(44146972-44147130)
chr8 (1-161)||(5192411-5192572)
chr8 (32-164)||(21929974-21930105)
chr8 (1-164)||(22452313-22452477)
chr8 (1-164)||(32400462-32400624)
chr8 (1-96)||(4807740-4807836)
chr8 (1-164)||(18881643-18881805)
chr8 (1-164)||(3380199-3380362)
chr8 (5-92)||(4423173-4423262)
chr8 (1-164)||(1824609-1824769)
chr8 (1-164)||(1859054-1859214)
chr8 (13-95)||(3208050-3208132)
chr8 (53-164)||(23565121-23565232)
chr8 (106-164)||(5192272-5192330)
chr8 (106-169)||(4807595-4807658)
chr8 (1-98)||(7117254-7117350)
chr8 (1-145)||(18253026-18253168)
chr8 (106-164)||(23565335-23565393)
chr8 (106-173)||(33895619-33895686)
chr8 (106-164)||(19391388-19391445)
chr8 (106-164)||(19392812-19392870)
chr8 (106-164)||(21929847-21929905)
chr8 (1-97)||(31268347-31268442)
chr8 (106-161)||(12723264-12723319)
chr8 (106-161)||(22452176-22452231)
chr8 (106-161)||(30784268-30784323)
chr8 (106-164)||(19924511-19924569)
chr8 (106-164)||(44147216-44147274)
chr8 (1-80)||(41688250-41688330)
chr8 (111-166)||(3819487-3819541)
chr8 (1-40)||(23565214-23565253)
chr8 (108-151)||(35795230-35795273)
chr8 (106-164)||(4518869-4518927)
chr8 (106-164)||(8802400-8802458)
chr8 (114-164)||(17648496-17648546)
chr8 (109-151)||(34602027-34602069)
chr8 (109-151)||(34602435-34602477)
chr8 (1-70)||(41385630-41385700)
chr8 (106-164)||(18252401-18252461)
chr8 (109-154)||(27453136-27453181)
chr8 (108-153)||(45163718-45163763)
chr8 (22-81)||(15869499-15869557)
[»] scaffold0179 (2 HSPs)
scaffold0179 (1-164)||(5789-5953)
scaffold0179 (106-164)||(5650-5708)
[»] scaffold0025 (4 HSPs)
scaffold0025 (1-164)||(61814-61978)
scaffold0025 (1-166)||(19283-19446)
scaffold0025 (106-164)||(62064-62122)
scaffold0025 (106-164)||(19527-19585)
[»] scaffold0419 (2 HSPs)
scaffold0419 (1-166)||(3100-3266)
scaffold0419 (106-166)||(2959-3019)
[»] scaffold0607 (2 HSPs)
scaffold0607 (1-170)||(2189-2357)
scaffold0607 (106-164)||(2048-2106)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-161)||(142087-142247)
scaffold0001 (113-166)||(141943-141996)
[»] scaffold0062 (4 HSPs)
scaffold0062 (1-164)||(49659-49823)
scaffold0062 (1-164)||(62198-62362)
scaffold0062 (106-164)||(49904-49962)
scaffold0062 (106-164)||(62443-62501)
[»] scaffold1202 (1 HSPs)
scaffold1202 (1-98)||(1914-2011)
[»] scaffold0087 (1 HSPs)
scaffold0087 (1-164)||(25104-25268)
[»] scaffold0267 (1 HSPs)
scaffold0267 (2-98)||(3709-3803)
[»] scaffold0683 (2 HSPs)
scaffold0683 (41-164)||(5290-5413)
scaffold0683 (106-164)||(5120-5178)
[»] scaffold0060 (3 HSPs)
scaffold0060 (1-85)||(66254-66338)
scaffold0060 (111-164)||(66424-66477)
scaffold0060 (106-164)||(66183-66242)
[»] scaffold0406 (2 HSPs)
scaffold0406 (1-166)||(1995-2155)
scaffold0406 (106-164)||(2236-2294)
[»] scaffold1875 (2 HSPs)
scaffold1875 (1-164)||(896-1059)
scaffold1875 (106-164)||(756-814)
[»] scaffold0150 (2 HSPs)
scaffold0150 (1-85)||(5911-5996)
scaffold0150 (106-151)||(6076-6121)
[»] scaffold0174 (2 HSPs)
scaffold0174 (1-164)||(29719-29880)
scaffold0174 (111-166)||(29938-29993)
[»] scaffold0002 (3 HSPs)
scaffold0002 (13-95)||(455000-455083)
scaffold0002 (13-89)||(455102-455179)
scaffold0002 (106-163)||(455274-455331)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-145)||(43964-44106)
scaffold0024 (106-161)||(43827-43882)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-77)||(112214-112291)
scaffold0014 (114-163)||(112380-112429)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-95)||(9992-10085)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-46)||(250658-250703)
scaffold0007 (106-166)||(250516-250576)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-77)||(3068-3144)


Alignment Details
Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 161
Target Start/End: Complemental strand, 9787722 - 9787563
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannn 101  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||       
T  9787722 aactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagcaggtcaaaagagcatatttccctaaacatagtgggtcacttttgccattt 9787623  T
Q  102 nnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
        ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  9787622 ttttaatagggggtcaaaattgcaacattttaaaacatagggggcgaaaaatgtagttta 9787563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 22191209 - 22191046
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nn 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       
T  22191209 aactttttgtaaagataaggggtcaaaaggcatatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcacttttgccattt 22191110  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  22191109 tttttgatagggggccaaaattgcaacattttaaaacataggggacgaaaagtgtagtttagcc 22191046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 11176071 - 11175907
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  11176071 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 11175972  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  11175971 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 11175907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 6763859 - 6764021
Alignment:
Q  3 actttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnn 101  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  6763859 actttttgtaaagataaggggtcaaaaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttt 6763958  T
Q  102 nnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
        |||||||| ||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  6763959 ttttaataggggaccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagcc 6764021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 25298941 - 25299104
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||| ||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||      
T  25298941 caactttttgtaaagataagggatcaaaaaacatatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 25299040  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||||| ||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  25299041 tttttaatagggggctaaaatcgcaacattttgaaacttagagggcgaaaattgaagtttagcc 25299104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 4588025 - 4587860
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-- 98  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  4588025 caactttttgtaaagataaggggttaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 4587926  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
           |||||||||||||||| ||||||||||||||| ||||||||||||| ||  ||||||||    
T  4587925 tttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtggtgtttagcc 4587860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2986850 - 2986689
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  2986850 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgtcatt 2986751  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          |||||||||||||||| ||||||||||||||| ||  ||||||||| || ||||||    
T  2986750 ttttttaatagggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagttta 2986689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 15735228 - 15735059
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||      
T  15735228 caactttttgtaaagataaggggtcaaaatacatatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcacttttgccatt 15735129  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 169  Q
          |||||||| ||||||| ||||||||||||||| ||| ||||||||| || ||||||||| ||||    
T  15735128 tcttttaataggggaccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcctataa 15735059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18537968 - 18538132
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||      
T  18537968 caactttttgtaaagataaggggtcaaaaagcatatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcacttttgccatt 18538067  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  18538068 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 18538132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30714414 - 30714578
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  30714414 caactttttgtaaagataacgggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcacttttgccatt 30714513  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||||||||||||||||||||| |||  ||| ||||||||| || |||||||||    
T  30714514 ttttttaatagggggccaaaattgcaacattttaaaatttagagggcgaaaagtgaagtttagcc 30714578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 38716357 - 38716194
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  38716357 caactttttgtaaagataaggggtcaaaaagcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccatt 38716258  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||||| |||||| |||||||||| |||| ||| ||| ||||| || |||||||||    
T  38716257 tttttaatagggggtcaaaatcgcaacattttaaaacttagagggtgaaaagtgaagtttagcc 38716194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9051167 - 9051331
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      
T  9051167 caactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcacttttgccatt 9051266  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||| |||||| |||||||||| |||| ||| ||||||||| || |||||||||    
T  9051267 ttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 9051331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15700911 - 15700747
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||      
T  15700911 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccatt 15700812  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||| ||||||| |||||||||| |||| || |||||||||| || | |||||||    
T  15700811 ttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 15700747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36464437 - 36464278
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  ||||||||| |||||||| | ||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||     
T  36464437 caactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagatcatatttccctaaacat--ggggtcacttttgccat 36464340  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 162  Q
          |||| |||| |||||| |||||||||| |||| || ||||||||||||  |||||||    
T  36464339 tttttaaata-ggggtcaaaatcgcaacattttaaaacttaaggggcgaaaaatacagtttag 36464278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17368380 - 17368314
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcata 67  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  17368380 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 9787803 - 9787863
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  9787803 aatagggggccaaaattgcaatattttgaaacatagggggcgaaaagtgtagtttagccaa 9787863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 43301802 - 43301657
Alignment:
Q  18 aaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggcc 116  Q
    ||||| ||||||| |||||||||||||| |||||| |||||||||| |||| ||||||||||||| ||||||||||||| ||       |||| | ||||    
T  43301802 aagggttcaaaagatcatatttcccttaagttagg-ggtcaaaagaacatacttccctaaacatatggggtcacttttgtcatttttttaata-gaggcc 43301705  T
Q  117 aaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||| ||||||||| ||||| || | ||||||||||| |||||||||    
T  43301704 aaaatcgcaacatttcgaaacttaagaggcgaaaaatgcagtttagcc 43301657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 17368465 - 17368520
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  17368465 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgttgtttagccaa 17368520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22387208 - 22387287
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||| |||||| ||||||||||||||||  |||||||| | ||||||||| ||||||||||||||||||| ||||||||    
T  22387208 caactctttgtatagataaggggtcaaaaaacatatttctcatatgttagggggtcaaaagagcatatttcactaaacat 22387287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28365674 - 28365581
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  |||||||||||| ||||| |||||||||||| |||||||| ||||||| ||||||||||||||||| ||| |||||||||||||    
T  28365674 caactttttgagaagataaggggttaaaagatcatatttccctcatgttagg-ggtcaaacgagcatatttccctaaatata-ggggtcacttttg 28365581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 331877 - 331779
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||| |||||||| || ||||||   ||||||||||||| |||||  |||||||||||||||||||||||||||| |  ||||||||||||||    
T  331877 caactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacatggaaggtcacttttgcca 331779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2190697 - 2190605
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||||||||||||||| |||| |  ||||||| ||||| |||||  ||||||||||||||||||||||||||||   ||||||||||||    
T  2190697 caactttttgtaaagataaggggccaaacgagcatattttccttaagttagagggtcaaaagagcatatttccctaaacat---gggtcacttttg 2190605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26829229 - 26829362
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  | |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||  | ||||||||||| ||     
T  26829229 caactttttgagatgataaggggtcaaaagatcatatttcccttatgttagg-ggtccaaagagcatatttccttaaacat--gaggtcacttttgtcat 26829325  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaac 137  Q
           ||||||||||||||| |||||||||| ||||    
T  26829326 tttttc-atagggggccaaaatcgcaacattttaaaac 26829362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 22191291 - 22191347
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 162  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  22191291 aataggggaccaaaattgcaacattttgaaacataggaggcgaaaagtgtagtttag 22191347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25884317 - 25884413
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc 97  Q
    ||||||||||  |||||||||||| ||||  ||||||||||||||||||||| | | |||| | |||||||| |||||||| ||||||||||||||||    
T  25884317 caactttttgagaagataaggggttaaaatatcatatttcccttatgttaggggattaaaataacatatttctctaaacat-gggggtcacttttgcc 25884413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1020554 - 1020478
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    |||||||||| |||||||| ||| ||||| ||||||||| ||||||||||  |||||||| ||||||||||| ||||    
T  1020554 caactttttgaaaagataaagggacaaaaatcatatttctcttatgttagagggtcaaaatagcatatttccataaa 1020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 15735312 - 15735368
Alignment:
Q  109 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
    ||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||    
T  15735312 aggggaccaaaattgcaacattttaaaacatagggggcgaaaagtggagtttagcca 15735368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 18537887 - 18537829
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||| || |||||||||    
T  18537887 aataggggaccaaaattgcaacattttaaaacataggggacgaaaagtgcagtttagcc 18537829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 30714333 - 30714275
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| || | |||||||    
T  30714333 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 30714275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 38716439 - 38716497
Alignment:
Q  107 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
    |||||||| ||||||||||||||||||||||||||| || ||||| || ||||||||||    
T  38716439 atagggggtcaaaattgcaacattttgaaacataggaggtgaaaagtgcagtttagcca 38716497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4104964 - 4105040
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    |||||||||||||| |||||| ||||||||  |||||| ||||||||||| ||||||||||||  |||||||||||||    
T  4104964 caactttttgtaaatataaggtgtcaaaagagcatattccccttatgtta-gaggtcaaaagaatatatttccctaaa 4105040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 15147854 - 15147813
Alignment:
Q  55 tcaaaagagcatatttccctaaacatagggggtcacttttgcc 97  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  15147854 tcaaaagagcatatttccctaaacat-gggggtcacttttgcc 15147813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 25884236 - 25884178
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||  || |||||||||    
T  25884236 aatagggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagcc 25884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 25298859 - 25298814
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||    
T  25298859 aataggaggccaaaatcgcaacattttaaaacatagggggcgaaaa 25298814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 9051086 - 9051026
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||  |||||| |||||||||| ||||||||| ||||||||||| | |||||||||    
T  9051086 aataggggatcaaaatcgcaacattttaaaacataggaggcgaaaaatgcactttagccaa 9051026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 2986932 - 2986967
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatag 141  Q
    |||||||||||||||| |||||||||||||||||||    
T  2986932 aatagggggccaaaatcgcaacattttgaaacatag 2986967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 33199613 - 33199546
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttc 71  Q
    |||||||||||||||  || ||||||  ||||||||||| | ||||| ||||||||||||||||||||    
T  33199613 tttttgtaaagataaaaggccaaaagagcatatttccctaaagttagaaggtcaaaagagcatatttc 33199546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 11176153 - 11176211
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| |||||| |||||||||||||||||||| ||| |||| || | |||||||    
T  11176153 aatagggggtcaaaatcgcaacattttgaaacataggaggccaaaagtgcactttagcc 11176211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 12350146 - 12350101
Alignment:
Q  31 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||    
T  12350146 tcatatttcccttaccttagg-ggtcaaaagagcatatttccctaaa 12350101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 15700992 - 15701050
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||| || | |||||||    
T  15700992 aataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 15701050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2123539 - 2123450
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtca 89  Q
    ||||||||||||||||||| ||||||||||  | ||||||||| | | |||  | |||||||||||||||||  ||||| ||| ||||||    
T  2123539 caactttttgtaaagataaagggtcaaaagaacttatttccctaaagatagaggatcaaaagagcatatttctataaacttagagggtca 2123450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 25884434 - 25884482
Alignment:
Q  115 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    |||||||||||||||||| |||| |||||| |||||||||  |||||||    
T  25884434 ccaaaattgcaacattttaaaacttaggggacgaaaaatgacgtttagc 25884482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26628165 - 26628329
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  26628165 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 26628264  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||    
T  26628265 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagcc 26628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27852891 - 27853055
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  27852891 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 27852990  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||    
T  27852991 ttttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 27853055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 48907432 - 48907595
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  48907432 caactttttttaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 48907531  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  48907532 tttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 48907595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23428759 - 23428920
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  23428759 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 23428858  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  23428859 ttttttaatagggggccaaaattgtaacattttgaaacttagggggcgaaaaatgaagttta 23428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 3328953 - 3329119
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||      
T  3328953 caactttttgtaaagataaggggtcaaaaggcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactttttccatt 3329052  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  3329053 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaa 3329119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8542774 - 8542610
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  8542774 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 8542675  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||| |||||||||||||||||||||| ||| || |||||| || |||||||||    
T  8542674 ttttttaatagggggtcaaaattgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 8542610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 8339080 - 8339250
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||      
T  8339080 caactttttgtaaagataaggggtcaaaaagcatatttctattatgttaggaggtcaaaaaagcatatttccctaaacataaggggtcacttttgccatt 8339179  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 170  Q
          |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||| ||||    
T  8339180 ttttttaatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagccattaaa 8339250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13081058 - 13080894
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||      
T  13081058 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcacttttgccatt 13080959  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||| |||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  13080958 ttttttaatagggagccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30155285 - 30155447
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||      
T  30155285 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgcca-t 30155383  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||||  |||||| |||||||||| |||| ||| |||||||||||  |||||||||    
T  30155384 tttttaataggggatcaaaatcgcaacattttaaaacttagagggcgaaaaataaagtttagcc 30155447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25179742 - 25179578
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |      
T  25179742 caactttttgtaaagataaggggtcaaaaaacatatttctcttacgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgctatt 25179643  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| |||||||||| |||| ||| ||||||||| || |||||||||    
T  25179642 ttttttaatagggggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 25179578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 10743571 - 10743409
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| ||      
T  10743571 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggttaaaagagcatatttccctaaacatagggagtcacttttgtcatt 10743473  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||||||||||| |||||||||| |||| |||||||||||||  | |||||||||    
T  10743472 tttttaatagggggccaaaatcgcaacattttaaaacttagggggcgaaaagaggagtttagcc 10743409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 22500735 - 22500900
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||      
T  22500735 caactttttgtaaatataagggatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgccatt 22500834  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
         ||||||||| ||||||||||||||||| |||  ||  ||| ||||| || |||||||||||    
T  22500835 tttttaatagggggtcaaaattgcaacattttaaaatttaaagggtgaaaagtgaagtttagccaa 22500900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22447880 - 22448045
Alignment:
Q  1 caactttttgtaaagata----aggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 96  Q
    ||||||||||||||||||    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22447880 caactttttgtaaagatatataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgc 22447979  T
Q  97 ca-nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
    ||        ||||||||||||||||||||||||||| |||| ||| ||||||||| || ||||||    
T  22447980 catattttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgcagttta 22448045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4522118 - 4521957
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |      
T  4522118 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcacttttgctact 4522019  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          |||||||||||||||| |||||||||| |||| ||  ||||||||| || ||||||    
T  4522018 ttttttaatagggggccaaaatcgcaacattttaaaacttatagggcgaaaagtgaagttta 4521957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 28173869 - 28174006
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||      
T  28173869 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcatttttgccatt 28173968  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaac 137  Q
          |||||||||||||||| |||||||||||||||    
T  28173969 ttttttaatagggggccaaaatcgcaacattttgaaac 28174006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 46673192 - 46673351
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnn 104  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||          
T  46673192 tttttgtaaagataaggggtcaaaaa-catatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgccatttttt 46673290  T
Q  105 naatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
     ||||||||| |||||| |||||||||  |||| || |||||||||| || | ||||||||    
T  46673291 taatagggggtcaaaatcgcaacatttgaaaacttaaggggcgaaaagtggactttagcca 46673351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 25022803 - 25022951
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||| ||||||  ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||      
T  25022803 caactttttgtaaagataagggttcaaaaaacatatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-- 25022900  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
         ||||  |||||||||| | ||||||||||||| ||| |||||||||    
T  25022901 tttttaataaagggccaaaatcgtaacattttgaaacttagtgggcgaaaa 25022951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3781042 - 3780883
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||      
T  3781042 caactttttgtaaagataaagggtcaaaaagcatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacat--ggggtcacttttgccatt 3780946  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||| |||| |||||| ||||||||||||||| ||||| || ||||||| | |||||||    
T  3780945 tttttaata-ggggtcaaaatcgcaacattttgaaacttagggagcaaaaaatgcattttagcc 3780883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 48860866 - 48860702
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||| ||||  ||      
T  48860866 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagaaggtcaaaatagcatatttccctaaacataaggggtcatttttatca-t 48860768  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
         |||| |||| ||||||| ||||||||| |||| ||||||||| ||| || |||||||||||    
T  48860767 tttttaataaggggtcaaaattacaacattttaaaacttagggggcgcaaagtggagtttagccaa 48860702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26633499 - 26633659
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||| ||  ||||||| ||||||||      
T  26633499 caactttttgtaaagataaggggtcaaaaaacatatttctcttatgttagg-ggtcaaaagagcatatttccctaaagat--ggggtcatttttgccatt 26633595  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||||| |||||| ||||||||| ||||| ||||||| ||||| ||  ||||||||    
T  26633596 tttttaatagggggtcaaaatcgcaacatttagaaacttagggggtgaaaagtgccgtttagcc 26633659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28155022 - 28155107
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 86  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28155022 caactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatgggg 28155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 40836334 - 40836482
Alignment:
Q  16 ataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca--nnnnnnnaatagggg 113  Q
    ||||||||||||||  |||||||||||||| ||||| |||||||||| |||||||||||||||||  ||||||||||||||||         ||||||||    
T  40836334 ataaggggtcaaaaaacatatttcccttatattagggggtcaaaagaacatatttccctaaacat--ggggtcacttttgccatttttttttaatagggg 40836431  T
Q  114 gccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    | |||||| |||||||||| |||| |||||||||||||||| |||||||||    
T  40836432 gtcaaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagcc 40836482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 20001843 - 20001778
Alignment:
Q  31 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20001843 tcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgc 20001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22416498 - 22416333
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaaca-tagggggtcacttttgcca 98  Q
    ||||||||||||||||||| ||||||||||  ||||||| ||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||    
T  22416498 caactttttgtaaagataatgggtcaaaagagcatatttaccttatgttagaaggtcaaaagagcatatatccctaaacattggggggtcacttttgcca 22416399  T
Q  99 -nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
            ||||||||  ||||||||||||||| | |||| || |||||||||| ||| ||||||||    
T  22416398 ttttttttaataggggatcaaaattgcaacattataaaactta-ggggcgaaaagtgttgtttagcc 22416333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 4776003 - 4775852
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca--nnnnnnnaata 109  Q
    |||||||||| ||||| | ||||||||||| ||||| ||| |||||||| ||||||||||||||||||| |||||||||||||||||          |||    
T  4776003 aagataagggatcaaaggatcatatttcccgtatgtgagggggtcaaaatagcatatttccctaaacat-gggggtcacttttgccaatttttttttata 4775905  T
Q  110 gggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 162  Q
    |||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||    
T  4775904 gggggccaaaattgcaacattttgaaacttagagggtgaaaagtgtagtttag 4775852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 25336520 - 25336354
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  ||| |||  ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||  || ||||||||| ||     
T  25336520 caactttttgagaagttaaaaggtcaaaaggtcatatttcccttatgttagggggtcaaaagagcataattccctaaatata--ggttcacttttgtcat 25336423  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaata 168  Q
          |||| | ||||||||||||||||||||||||  || |||||||||| || |||||||||||||    
T  25336422 ttttttaataagaggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagccaata 25336354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 34878670 - 34878754
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 86  Q
    ||||||||||||||||||||| ||||||  |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  34878670 aactttttgtaaagataagggatcaaaaagcatatttcccttatattagggggtcaaaagagcatatttccctaaacttaggggg 34878754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 33279729 - 33279875
Alignment:
Q  6 ttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnn 103  Q
    ||||||||| ||||||| |||||||  |||||||||||||||||||| |||||||||||||||||| |||||||| || ||| |||||||||||          
T  33279729 ttttgtaaatataagggatcaaaagagcatatttcccttatgttagggggtcaaaagagcatattttcctaaaca-agagggccacttttgccatttttt 33279827  T
Q  104 nnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
      ||||||||| |||||| |||||||||| |||| |||||||||||||    
T  33279828 ttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaa 33279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 9496361 - 9496452
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||||||||||| |||||  ||||||||| |||||||||  ||||||||||||||||||||||||||||  | ||||||||||||||    
T  9496361 tttttgtaaagataaggggacaaaaagcatatttcctttatgttagagggtcaaaagagcatatttccctaaacat--gtggtcacttttgcca 9496452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 26628083 - 26628025
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26628083 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 26628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 28154940 - 28154882
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28154940 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26127046 - 26127139
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 96  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||||||||  |||||||| | |||||||||||||||||  ||||||||||||||    
T  26127046 caactttttgtaaagataaggggccaaaaagcatatttcccctatgttagagggtcaaaataacatatttccctaaacat--ggggtcacttttgc 26127139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 22447798 - 22447740
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  22447798 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 22447740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 32960698 - 32960645
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32960698 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagcc 32960645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1743413 - 1743255
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  |||||||||||||||||| ||| |||||| |||||||||| ||||||||||| |||||| |||||||||  |||     ||||||||     
T  1743413 caactttttgagaagataaggggtcaaaagatcacatttcc-ttatgttagggggtcaaaagagtatattttcctaaacatcaggg-----ttttgccat 1743320  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||| ||||| | ||||||||||||| ||||| ||||||| || |||||||||    
T  1743319 ttttttaatagggggctaaaatcgaaacattttgaaacttagggtgcgaaaagtgcagtttagcc 1743255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 36311303 - 36311152
Alignment:
Q  13 aagataaggggtcaaaa-gtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca--nnnnnnnaata 109  Q
    |||||||||||| |||| |||||||||||||||||||| | ||||||||||| |||||| |||||  ||| ||||||||||||||||         ||||    
T  36311303 aagataaggggttaaaatgtcatatttcccttatgttatggggtcaaaagagtatattttcctaa--atatggggtcacttttgccatttttttttaata 36311206  T
Q  110 gggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
     ||||||||||| |||||||||| |||| |||||| |||||| || |||||||||    
T  36311205 -ggggccaaaatcgcaacattttaaaacttaggggacgaaaagtgcagtttagcc 36311152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 3328871 - 3328813
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  3328871 aatagggggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcc 3328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 26177096 - 26177189
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 96  Q
    ||||||||||||||||||| | | |||||  |||||||||| ||||||||  |||||||| ||||||||||||| |||||  ||||||||||||||    
T  26177096 caactttttgtaaagataatgagccaaaaagcatatttcccctatgttagagggtcaaaatagcatatttccctgaacat--ggggtcacttttgc 26177189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 27852811 - 27852751
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||    
T  27852811 aatagggggctaaaattgcaacattttgaaacatagggggcgaaaagtgcactttagccaa 27852751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 49657939 - 49658087
Alignment:
Q  20 ggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaa 118  Q
    ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||  |||  ||||||||||||| |       ||||  ||| |||    
T  49657939 ggggtcaaaagatcatattttccttatgttagg-ggtcaaaagagcatatttccctaa--atattgggtcacttttgcaatttttttaata-tgggtcaa 49658034  T
Q  119 aattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaat 171  Q
    |||||||||||||| |||| |||| || |||||||| |||||| |||| ||||    
T  49658035 aattgcaacattttaaaacttaggtggtgaaaaatgcagtttaaccaaaaaat 49658087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 22500654 - 22500591
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 169  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||| ||||    
T  22500654 aatagggggccaaaattgcaatattttgaaacataggggccgaaaagtgcagtttagcctataa 22500591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 46387743 - 46387809
Alignment:
Q  30 gtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc 97  Q
    |||||||||||||||||||||| | |||||||||||| ||||| ||||||| ||||||||||||||||    
T  46387743 gtcatatttcccttatgttaggggatcaaaagagcatgtttccttaaacat-gggggtcacttttgcc 46387809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 34878587 - 34878529
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||||||||||||||||||||| || || |||||||||    
T  34878587 aatagggggccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcc 34878529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 35201136 - 35201231
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||  |||||||||||||||||  |||||||||| ||||||||||  ||||||||||||| |||||| ||||||  ||||||| ||||||||    
T  35201136 aactttttgagaagataaggggtcaaaatatcatatttcctttatgttagg--gtcaaaagagcatgtttcccaaaacatgtggggtcatttttgcca 35201231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 6927715 - 6927760
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  6927715 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaa 6927760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 8338998 - 8338937
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 167  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || | ||||||||||    
T  8338998 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaat 8338937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 32960803 - 32960887
Alignment:
Q  53 ggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnnnnaatagggggccaaaattgcaacattttgaaac 137  Q
    |||||||| |||||||||||||||||||||||||||||||||||||        |||||||| ||||||| |||||||||||||||    
T  32960803 ggtcaaaa-agcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaac 32960887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 32315071 - 32315004
Alignment:
Q  14 agataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||||||||  | |||||||||| |||||||| |||||||||| |||||||||||||||||    
T  32315071 agataaggggtcaaaatataatatttccctcatgttagggggtcaaaagaacatatttccctaaacat 32315004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 28173787 - 28173729
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| || | |||||||    
T  28173787 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 28173729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 33105073 - 33105008
Alignment:
Q  32 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||| |||||| ||| || |||||||||||||||||||||||||| |||||||||||| ||||    
T  33105073 catatttctcttatgatag-agatcaaaagagcatatttccctaaacatggggggtcactttagcca 33105008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 13081140 - 13081185
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  13081140 aatagggggccaaaatcgcaacattttgaaacataggaggcgaaaa 13081185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 23428677 - 23428620
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    |||||||| | |||||||||||||| |||||||||||||||||||| || ||||||||    
T  23428677 aataggggactaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagc 23428620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 3821025 - 3820917
Alignment:
Q  53 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaa 152  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||       |||| |||| |||||| |||||||||| |||| ||||| || ||||     
T  3821025 ggtcaaaagagcatatttccctaaacat--ggggtcacttttgccatttttttaata-ggggtcaaaatcgcaacattttaaaacttagggagcaaaaag 3820929  T
Q  153 tgtagtttagcc 164  Q
    || | |||||||    
T  3820928 tgcattttagcc 3820917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 18388871 - 18388933
Alignment:
Q  32 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||  |||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  18388871 catatttatcttatggtagggggtcaaaagagcatatttcccttaacat-gggggtcacttttg 18388933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 25179821 - 25179879
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||| |||||||| || ||||||||||||||||||||||||||||| || | |||||||    
T  25179821 aataaggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 25179879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 26723904 - 26723962
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||||||   |||| |||||||| |||| ||||||||||||    
T  26723904 aatagggggccaaaattgcaacattagtaaacttagggggccaaaactgtagtttagcc 26723962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 46673103 - 46673045
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||| || | |||||||    
T  46673103 aatagggggccaaaattgcaacattatgaaacataggagacgaaaagtgcactttagcc 46673045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6927634 - 6927593
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttccct 42  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  6927634 caactttttgtaaagataaggggtcaaaaaacatatttccct 6927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 26722591 - 26722530
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 167  Q
    |||||||||||||||| ||||||||   |||| |||||||| |||| |||||||||||||||    
T  26722591 aatagggggccaaaatcgcaacattggtaaacttagggggccaaaactgtagtttagccaat 26722530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32960782 - 32960823
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttccct 42  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  32960782 caactttttgtaaagataaggggtcaaaaagcatatttccct 32960823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 23320484 - 23320446
Alignment:
Q  41 cttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  23320484 cttatgttagg-ggtcaaaagagcatatttccctaaacat 23320446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 31039148 - 31039202
Alignment:
Q  31 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 86  Q
    ||||||||||| ||||||||| |||||||||||||| ||| ||| |||||||||||    
T  31039148 tcatatttcccatatgttagg-ggtcaaaagagcatgttttccttaacataggggg 31039202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 34296529 - 34296596
Alignment:
Q  11 taaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    ||||||||| ||||||||||  ||||||||| | | |||||  |||||||||||||||||||||||||    
T  34296529 taaagataaagggtcaaaagagcatatttccataaagttagagggtcaaaagagcatatttccctaaa 34296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 43668565 - 43668507
Alignment:
Q  39 cccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||| ||||  |||||||||||||||||||||| |||| | ||||||||||||||||    
T  43668565 cccttattttagagggtcaaaagagcatatttccct-aacacatggggtcacttttgcca 43668507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 20001954 - 20001992
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggg 144  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  20001954 aatagggggccaaaatcgcaacattttgaaacttagggg 20001992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 27668139 - 27668223
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||| |||||||||| ||||||| ||||||||||| | |||||||| |||||||||   ||||||||| || ||||||||||||    
T  27668139 aagataatgggtcaaaagatcatatt-cccttatgttaag-ggtcaaaatagcatatttttttaaacatagcggatcacttttgcca 27668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 9662387 - 9662416
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag 30  Q
    ||||||||||||||||||||||||||||||    
T  9662387 caactttttgtaaagataaggggtcaaaag 9662416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 19984906 - 19984849
Alignment:
Q  107 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||  ||||||||| ||||||| ||||| || | |||||||    
T  19984906 atagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 30155203 - 30155158
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||| |||||||||| ||||||||||||||| ||||||| ||||||    
T  30155203 aataaggggccaaaactgcaacattttgaaatataggggacgaaaa 30155158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 40836238 - 40836181
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    ||||| || ||||||| |||||||||| |||| |||||| |||||| |||||||||||    
T  40836238 aatagaggaccaaaatcgcaacattttaaaacttaggggacgaaaagtgtagtttagc 40836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 44457445 - 44457490
Alignment:
Q  109 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 154  Q
    ||||||||||||| ||||| |||||||||||||| || ||||||||    
T  44457445 agggggccaaaatcgcaactttttgaaacataggaggtgaaaaatg 44457490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 4776064 - 4776124
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||| ||||||||||| |||||||||| || | ||| |||||||||||  |||||||||||    
T  4776064 aataaggggccaaaatcgcaacattttaaatcttagagggcgaaaaatccagtttagccaa 4776124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 5001256 - 5001220
Alignment:
Q  108 tagggggccaaaattgcaacattttgaaacatagggg 144  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  5001256 tagggggccaaaattgcaagattttgaaagatagggg 5001220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 48860930 - 48860978
Alignment:
Q  116 caaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||| |||||||||||||  ||||| || |||||||||    
T  48860930 caaaattgcaacattatgaaacataggggatgaaaagtgcagtttagcc 48860978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 42271496 - 42271331
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  42271496 caactttttgtaaacataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 42271397  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
         |||||| ||||||||| ||||||||||||||| ||| |||||||||||| | |||||||||    
T  42271396 tttttaataggaggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaaatttagccaa 42271331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 2331177 - 2331015
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  2331177 caactttttgtaaagataaggagtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 2331078  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
         |||| |||||||||||||||||||||| |||| ||| || |||||| || ||||||||    
T  2331077 tttttaataaggggccaaaattgcaacattttaaaacttagaggacgaaaagtgaagtttagc 2331015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 20636783 - 20636619
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  20636783 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 20636684  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| |||||||||| |||| ||| |||| |||| || |||||||||    
T  20636683 ttttttaatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagcc 20636619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 20638655 - 20638491
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  20638655 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 20638556  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| |||||||||| |||| ||| |||| |||| || |||||||||    
T  20638555 ttttttaatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagcc 20638491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 19195353 - 19195519
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||      
T  19195353 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcacttttgccatt 19195452  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||||| ||||||||||||||||| |||| ||| ||| ||||| || |||||||||||    
T  19195453 ttttttaatagggggtcaaaattgcaacattttaaaacttagagggtgaaaagtgaagtttagccaa 19195519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 36746643 - 36746808
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc-an 99  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||       
T  36746643 caactttttgtaaagataaggggttaaaaggcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagtgggttacttttgccttt 36746742  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  36746743 ttttttaatagggggccaaaattgcaacattttaaaacata-ggggcgaaaagtgtagtttagccaa 36746808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27869335 - 27869496
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  27869335 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 27869434  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          |||||||  ||||||| ||||||||||||||| ||| ||||||||| || ||||||    
T  27869435 ttttttaatagggctccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagttta 27869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21224492 - 21224656
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc-an 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  21224492 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccttt 21224591  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          || |||||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  21224592 ttttttaacagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 21224656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 24597655 - 24597821
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  24597655 caactttttgtaaagagaaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggttacttttgccatt 24597754  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||||| |||||| |||||||||| |||| ||| ||||||||| || |||||||||||    
T  24597755 ttttttaatagggggacaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccaa 24597821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 35337662 - 35337815
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  35337662 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 35337761  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 154  Q
         ||||| || ||||||| | ||||||||||||| ||   |||||||||||    
T  35337762 tttttaatagaggaccaaaatcgtaacattttgaaacttaaaaggcgaaaaatg 35337815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 48176103 - 48176266
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||      
T  48176103 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacatagggagttacttttgccatt 48176201  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| ||||||||||||||| ||||||||||||| |  |||||||||    
T  48176202 ttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcc 48176266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41452389 - 41452543
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||      
T  41452389 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcacttttgccatt 41452488  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 154  Q
          ||||||||||||||||| |||||||||||||| ||| || |||||||||    
T  41452489 ttttttaatagggggccaaaattacaacattttgaaacttagaggacgaaaaatg 41452543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3562573 - 3562733
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  3562573 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 3562671  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          |||||||||||||||| | ||||||||||||| ||| || |||||| || ||||||    
T  3562672 ttttttaatagggggccaaaatcgtaacattttgaaacttagaggacgaaaagtgaagttta 3562733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 17305928 - 17305761
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-- 98  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||      
T  17305928 caactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacata-ggggtcacttttgccatt 17305830  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 167  Q
           |||||||||||||||| ||||||||||||||| ||| || |||||| || ||||||||||||    
T  17305829 tttttttaatagggggccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagccaat 17305761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18754406 - 18754567
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||      
T  18754406 caacattttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcacttttgccatt 18754505  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          |||||||| ||||||| ||||||||||||||| ||||||||||||| || ||||||    
T  18754506 ttttttaataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtggagttta 18754567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31494074 - 31493911
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||      
T  31494074 caactttttgtaaagataaggggtcaaaaagcatattttccttatgttagagggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 31493976  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| | ||||||||||||| |||||| |||||| || |||||||||    
T  31493975 tttgttaatagggggccaaaatcgtaacattttgaaacttaggggccgaaaagtggagtttagcc 31493911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19919743 - 19919905
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc-an 99  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||       
T  19919743 caactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatattt-cctaaacat-gggggtcacttttgccttt 19919840  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  19919841 ttttttaatagggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 19919905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11843318 - 11843481
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    ||||||||||||| |||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||      
T  11843318 caactttttgtaaggataaggggtcaaaaagcatattttccttatgttagg-ggtcaaaagagcatatttccctaaacataggaggtcacttttgccatt 11843416  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||| |||||| ||||||||||||||| || || ||||||| |  |||||||||    
T  11843417 ttttttaatagggggtcaaaatcgcaacattttgaaacttaaggagcgaaaagtagagtttagcc 11843481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8526959 - 8526796
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||      
T  8526959 caactttttgtaaaaata-ggggtcaaaaagcatatttcccttatgttaggaggtcaaatgagcatattttcctaaacatagggggtcatttttgccatt 8526861  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||| ||||||||||| |||||||||| ||| ||| ||||| || | |||||||    
T  8526860 tttattaatagggggtcaaaattgcaaaattttgaaacttagagggtgaaaagtgaaatttagcc 8526796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13577926 - 13578088
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||| |||||| |||||||||  |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||      
T  13577926 caactttttgtatagataaagggtcaaaaagcatatttcccttatgttagg-ggtcaaaagagcatatttccttaaacata-ggggtcacttttgccatt 13578023  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||| ||| |||||| ||||||||||||||| ||||||||||||| |  |||||||||    
T  13578024 ttttttaatagagggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcc 13578088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21225688 - 21225849
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||||||||||  ||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||      
T  21225688 caactttttgtaaagacgaggggtcaaatagcatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacatagagggtcgcttttgccatt 21225786  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||| | || ||||| |||||||||| |||| || | ||||||||||| |||||||||    
T  21225787 gttttaatagagagctaaaatcgcaacatttt-aaacttaagtggcgaaaaatgcagtttagcc 21225849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 44078015 - 44078090
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44078015 tttttgtaaagataaggggtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 44078090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 10023924 - 10024010
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggt 87  Q
    |||||||||||||||||||||||||||||   |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  10023924 caactttttgtaaagataaggggtcaaaaaaaatattttccttatgtaagggggtcaaaagagcatatttccctaaacatagggggt 10024010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 14624766 - 14624608
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||||||||||||| |||||||||   ||||||||||||||||| | |||||||||||||||||| |||||||||   |||| ||||||||||      
T  14624766 caactttttgtaaagataaagggtcaaaaagtatatttcccttatgttatg-ggtcaaaagagcatattttcctaaacat--tgggttacttttgcca-t 14624671  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||| ||||||||||| |||| |||||||||| |||||| |||||| ||||||||||||    
T  14624670 tttttaata-ggggccaaaatcgcaatattttgaaacttaggggacgaaaagtgtagtttagcc 14624608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10655493 - 10655329
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||| ||||   ||||||| ||||| ||||| | | ||||||||||||||||||||||||||||| ||| |||||| |      
T  10655493 caactttttgtaaagataaggggttaaaaaa-atatttctcttatattaggggattaaaagagcatatttccctaaacataggggatcatttttgcaatt 10655395  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
          |||| |||||||||| ||||||||||| |||| |||||||| |||| || ||||||||||    
T  10655394 ttttttaataaggggccaaaactgcaacattttaaaacttagggggcaaaaagtggagtttagcca 10655329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 25002859 - 25002707
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagg 111  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||||  ||||||| ||||||||       |||| |    
T  25002859 aagataaggggtcaaaagatcatatttcctttatgttagg-ggtcaaaagagcatgtttccctaaacat--ggggtcatttttgccatttatttaata-g 25002764  T
Q  112 gggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaata 168  Q
    ||||||||||  |||||||||||||| |||||  |||||| || |||||||| ||||    
T  25002763 gggccaaaatcacaacattttgaaacttagggcacgaaaagtgcagtttagctaata 25002707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4571483 - 4571579
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||||   |||||||||||||||    
T  4571483 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaacat--tgggtcacttttgcca 4571579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 24464728 - 24464646
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 96  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||| ||||    
T  24464728 aagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacat--ggggtcactcttgc 24464646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26126418 - 26126339
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  26126418 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttagg-ggtcaaaaaagcatatttccctaaacat 26126339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39182098 - 39182004
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||  ||||||| ||||||||    
T  39182098 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttatg--gtcaaaagagcatatttccctaaacat--ggggtcatttttgcca 39182004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4193714 - 4193621
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||  | |||||||||||||    
T  4193714 caactttttgaaaagataaggggtcaaaagatcatatttctcttatgttaag-ggtcaaaagagcatatttccctaaacgca-ggggtcacttttg 4193621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 26385425 - 26385263
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  |||||||| ||||||||  ||||||||| ||||||||||| |||||||| |||||||||||||||||||   |||||||||||||||     
T  26385425 caactttttgagaagataagaggtcaaaatatcatatttctcttatgttagg-ggtcaaaatagcatatttccctaaacatgatgggtcacttttgcca- 26385328  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||| ||||||  |||| |||||||||  |||||| |||||| || |||||||||    
T  26385327 ttttttaataggggaccaaaaacgcaatattttgaaatttaggggacgaaaagtgcagtttagcc 26385263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 31494156 - 31494221
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaat 171  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  31494156 aatagggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagccaataaat 31494221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 3403206 - 3403286
Alignment:
Q  16 ataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||  |||||||||||||    
T  3403206 ataagggatcaaaagatcatatttcccttatgttagggggtcaaaagagcatattttcctatacatgaggggtcacttttg 3403286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9157190 - 9157350
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  |||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||    ||||||||||||||     
T  9157190 caactttttgagaagataagtggtcaaaagatcatatttcacttatgttagg-ggtcaaaagagcatattttcctaaacat--ttggtcacttttgccat 9157286  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||| |||  ||||||  |||||||||||||  |||||| ||||||||| |||||||||    
T  9157287 ttttttaata-gggatcaaaatcacaacattttgaaatttaggggacgaaaaatgcagtttagcc 9157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39440260 - 39440328
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatat 68  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  39440260 caactttttgaaaagataagggatcaaaagatcatatttcccttatgttaggaggtcaaaagatcatat 39440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5111603 - 5111512
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 94  Q
    ||||||||||  |||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||| |||||||||  ||||||||||||    
T  5111603 caactttttgagaagataaggggtcaaaatatcatatttcccttatgttagg-ggtcaaaagaacatattttcctaaacat--ggggtcactttt 5111512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 6798074 - 6798133
Alignment:
Q  21 gggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6798074 gggtcaaaaatcatatttcccttatgttagagggtcaaaagagcatatttccctaaacat 6798133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 15681743 - 15681682
Alignment:
Q  20 ggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  15681743 ggggtcaaaagatcatagttcccttatgttagggggtcaaaagagcatatttccctaaacat 15681682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 24448187 - 24448256
Alignment:
Q  5 tttttgtaaagataaggggtca-aaagtcatatttcccttatgttaggaggtcaaaagagcatatttccc 73  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||| |||||||| ||||||||||||    
T  24448187 tttttgtaaagataaggggtcataaaaacatatttcccttatgttagggggtcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15681794 - 15681720
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccct 74  Q
    ||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||| ||||||    
T  15681794 caactttttgacaagataaggggtcaaaagatcatagttcccttatgttagggggtcaaaagatcatagttccct 15681720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 19195272 - 19195214
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  19195272 aataggggaccaaaattgcaatattttgaaacatagggggtgaaaaatgcagtttagcc 19195214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 21690474 - 21690416
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  21690474 aataaggggccaaaattgcaagattttgaaacataggggacgaaaagtgtagtttagcc 21690416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 6650653 - 6650544
Alignment:
Q  53 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaa 152  Q
    ||||||||||||||||||||||||| ||  |||||| |||||||||       |||| ||||||||||| |||| ||||| |||| ||||||||||| |     
T  6650653 ggtcaaaagagcatatttccctaaatat--ggggtcccttttgccatttttttaataaggggccaaaatcgcaaaattttaaaacttagggggcgaacag 6650556  T
Q  153 tgtagtttagcc 164  Q
    || |||||||||    
T  6650555 tgcagtttagcc 6650544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 48176021 - 48175962
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaa-tgtagtttagcc 164  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||    
T  48176021 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaaagtgcagtttagcc 48175962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 8527040 - 8527098
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| || | |||||||    
T  8527040 aatagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcc 8527098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 11843236 - 11843178
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||| |||||||| |||||||||||||||||||||||||| || || |||||||||    
T  11843236 aatagggagccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcc 11843178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 20636864 - 20636922
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || | |||||||    
T  20636864 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 20636922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 21224411 - 21224354
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  21224411 aataggggaccaaaattgcaacattttgaaacata-agggcgaaaaatgcagtttagcc 21224354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23439758 - 23439660
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||  ||||||||||| |||||||  ||||||||||||| |||||   ||||||| | ||||||||| ||||||| ||| |||||||||||||    
T  23439758 caacttttttaaaagataagggatcaaaagagcatatttcccttaagttagagagtcaaaatatcatatttccttaaacatggggagtcacttttgcca 23439660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 27869254 - 27869196
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || | |||||||    
T  27869254 aatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 33237569 - 33237713
Alignment:
Q  17 taaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnnnnaataggggg 114  Q
    |||||||||||||  ||||||| ||||||| ||||| ||| ||||||||||||| ||||||||||  ||||| ||||||||||        ||||||| |    
T  33237569 taaggggtcaaaatatcatattacccttattttagggggtgaaaagagcatattgccctaaacat--ggggtgacttttgccatattttttaatagggag 33237666  T
Q  115 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
     |||||| |||||||||| |||| ||| |||| ||||||| ||||||    
T  33237667 tcaaaatcgcaacattttaaaacctagagggcaaaaaatggagttta 33237713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 39182179 - 39182237
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||| || |||||||||    
T  39182179 aatagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcc 39182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 42271578 - 42271636
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| || | |||||||    
T  42271578 aatagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcc 42271636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 2331273 - 2331322
Alignment:
Q  115 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||| |||||||||||||||||| || |||||||||    
T  2331273 ccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2331322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 3562491 - 3562446
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||    
T  3562491 aatagggggccaaaatcgcaacattttgaaacatagggagcgaaaa 3562446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 3769564 - 3769489
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    |||||||||||||||| | ||||||  |||||||| | ||||||| | |||||||| |||||||||| ||||||||    
T  3769564 tttttgtaaagataagagatcaaaaagcatatttctcatatgttaaggggtcaaaaaagcatatttctctaaacat 3769489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 43251428 - 43251349
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    |||||||||  ||||||| | |||||||| ||||||||||||||||||||  ||||||||||| | |||| |||||||||    
T  43251428 aactttttgagaagataaagagtcaaaagatcatatttcccttatgttagagggtcaaaagagtacattttcctaaacat 43251349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 5490924 - 5490966
Alignment:
Q  109 agggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  5490924 agggggccaaaattgcaactttttgaaacatagggggtgaaaa 5490966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 19493481 - 19493391
Alignment:
Q  3 actttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||  ||||||| |||||||||  |||||||| ||||||||| || |||||||| ||||||||||| |||||||  |||||||||||||    
T  19493481 actttttgagaagataaagggtcaaaaaatcatattttccttatgtttgg-ggtcaaaatagcatatttccataaacat--ggggtcacttttg 19493391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 24597575 - 24597517
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||| || | |||||||    
T  24597575 aatagggggccaaaatcacaacattttgaaacataggaggcgaaaagtgcactttagcc 24597517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9822239 - 9822296
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtca 57  Q
    ||||||||||  |||||||||||||||||| || |||||||||||||||||| |||||    
T  9822239 caactttttgagaagataaggggtcaaaagatcgtatttcccttatgttagggggtca 9822296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10724164 - 10724221
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtca 57  Q
    ||||||||||  |||||||||||||||||| || |||||||||||||||||| |||||    
T  10724164 caactttttgagaagataaggggtcaaaagatcgtatttcccttatgttagggggtca 10724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 3148084 - 3148008
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||| ||| |||||||| |  ||||||||| |||| ||||| | |||||||||||||| |||||||||||    
T  3148084 tttttgtaaagttaaagggtcaaaggagcatatttccattattttaggggatcaaaagagcatatatccctaaacat 3148008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 10655575 - 10655634
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||| | |||||||||||||||||||||||| | |||||||| || |||||||||||    
T  10655575 aataggggacaaaaattgcaacattttgaaacata-gaggcgaaaagtgcagtttagccaa 10655634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 13577845 - 13577789
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 162  Q
    |||||||||||||||| ||||||||||||||||||| | |||| || || |||||||    
T  13577845 aatagggggccaaaatcgcaacattttgaaacatagagagcgagaagtgcagtttag 13577789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 17306016 - 17306067
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    |||||||||||||||||||||| ||||||| |||||||||||||  |||||||    
T  17306016 ggggccaaaattgcaacattttaaaacata-ggggcgaaaaatgcggtttagc 17306067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 26385507 - 26385547
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggc 146  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  26385507 aatagggggccaaaatcgcaacattttgaaacttagggggc 26385547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 7365387 - 7365234
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgt----taggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  ||||||||| |||||||  ||||||||||||||||     |||| |||||| ||||||||||| || |||||| |||  |||||||||    
T  7365387 caactttttgagaagataaggagtcaaaatatcatatttcccttatgcatggtagg-ggtcaatagagcatatttgccaaaacattggg--tcacttttg 7365291  T
Q  96 ccannnnnnn-aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||        |||||||||| ||||| | |||||||| ||||||||||||||||||    
T  7365290 ccattttttttaatagggggcaaaaatcgtaacattttaaaacatagggggcgaaaa 7365234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29051782 - 29051704
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||  ||||||||||||||||| |||| |||| ||||| ||| | ||||||| ||||||||||  ||||||||    
T  29051782 caactttttgagaagataaggggtcaaaaatcatttttctcttatattatg-ggtcaaaggagcatatttttctaaacat 29051704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 6798034 - 6798095
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccct 74  Q
    |||||||||||||||||| |||||||| |||||||||||  |||||||| | |||||||||||    
T  6798034 aagataaggggtcaaaagatcatattttccttatgttagagggtcaaaa-atcatatttccct 6798095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 15093922 - 15093968
Alignment:
Q  34 tatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    |||||||||| ||||||| ||| |||||||| |||||||||||||||    
T  15093922 tatttcccttttgttagggggttaaaagagcttatttccctaaacat 15093968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 15681878 - 15681936
Alignment:
Q  108 tagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||| ||||||||| ||||||||||||||| |||||| | |||| || |||||||||||    
T  15681878 taggaggccaaaatcgcaacattttgaaacttaggggtctaaaagtgcagtttagccaa 15681936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 24448103 - 24448037
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaatt 172  Q
    ||||||||  |||||| |||||||||| |||| | ||||||||||| || ||||||||| |||||||    
T  24448103 aataggggatcaaaatcgcaacattttaaaacttggggggcgaaaagtgcagtttagcctataaatt 24448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 19919662 - 19919617
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  19919662 aataaggggccaaaatcgcaacattttaaaatatagggggcgaaaa 19919617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 34174028 - 34174065
Alignment:
Q  108 tagggggccaaaattgcaacattttgaaacataggggg 145  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  34174028 tagggggccaaaattgcaagattttgaaagataggggg 34174065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 47113279 - 47113202
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    ||||||||| ||||||||| ||| |||||| || ||||||||| | | |||  || ||||||||||||||||||||||    
T  47113279 caactttttataaagataaagggccaaaagatcttatttccctaaagatagagggccaaaagagcatatttccctaaa 47113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4597545 - 4597709
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||      
T  4597545 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcatttttgccatt 4597644  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||    
T  4597645 ttttataatagggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 4597709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24051172 - 24051009
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||| ||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  24051172 caactttttgtaaatataaggggtcaaaaagtatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 24051073  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  24051072 tttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 24051009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 26710447 - 26710612
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||      
T  26710447 caactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcgcttttgccatt 26710546  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
          |||||||||||||||| ||||||||||||||| ||| ||||||||| || ||||||||||    
T  26710547 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcca 26710612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18791521 - 18791358
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  18791521 caactttttgtaaagatgaggggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 18791422  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||| |||||||||| |||||||||| |||| ||| ||||||||| || |||||||||    
T  18791421 tttttaatagagggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 18791358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15298649 - 15298500
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  15298649 caactttttgtaaagataagggatcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 15298550  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaa 150  Q
         |||||||||||||| | ||||||||||||||| ||| ||||||||    
T  15298549 tttttaatagggggccaaactcgcaacattttgaaacttagagggcgaaa 15298500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 32451890 - 32451726
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||      
T  32451890 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctataaacatagggggtcacttttgccatt 32451791  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||||||||||  |||||||||||||| ||| ||||||||| || |||||||||    
T  32451790 ttttttaatagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcc 32451726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24603525 - 24603360
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  24603525 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 24603426  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
          ||||||||  |||||| ||||||||||||||| ||  || |||||| || ||||||||||    
T  24603425 ttttttaataggggagcaaaatcgcaacattttgaaacttaaaggacgaaaagtgaagtttagcca 24603360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31210958 - 31210794
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||      
T  31210958 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgtcatt 31210859  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||| ||||||||| |||||||||| |||| ||| ||||||||| || |||||||||    
T  31210858 ttttttaataggaggccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 31210794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14572318 - 14572480
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||      
T  14572318 caactttttataaagataaggggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 14572416  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||||||||||||||||| ||||| |||| ||| ||||||||| || | |||||||    
T  14572417 tttttaatagggggccaaaattgcaatattttaaaacttagagggcgaaaagtggactttagcc 14572480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 25819848 - 25819683
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||      
T  25819848 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacata-ggggtcacttttgccatt 25819750  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||||||||||||||||||||||| |||| ||| ||||||||| ||  ||||||||||    
T  25819749 ttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaggtttagccaa 25819683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 34834088 - 34833925
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nn 100  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  34834088 aactttttgtaaagataacgggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattt 34833989  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||||     ||||||||||||||||||| ||| ||||||||| || |||||||||    
T  34833988 tttttaataggggcgaggaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 34833925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8412922 - 8412758
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||      
T  8412922 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttctctaaacatagggggtcgcttttgccatt 8412823  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||| |||||||| ||||||||||||||| || |||||| ||| || | |||||||    
T  8412822 ttttttaatagggagccaaaatcgcaacattttgaaacttaaggggcggaaagtggactttagcc 8412758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22968295 - 22968457
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  22968295 caactttttgtaaagataaggg-tcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 22968393  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||| ||||||||||| ||||||||||||||| || |||||||||| || | |||||||    
T  22968394 ttttttaata-ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 22968457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 23820098 - 23819936
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  23820098 caactttttgtaaagataaggg-tcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 23820000  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||| ||||||||||| ||||||||||||||| || |||||||||| || | |||||||    
T  23819999 ttttttaata-ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 23819936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 4013818 - 4013968
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagg 111  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||       ||||||    
T  4013818 aagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacat-gggggtcacttttgacatttttttaatagg 4013916  T
Q  112 gggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    |||||||||| ||||||||||||||| |||||| |||||| || ||||||||    
T  4013917 gggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 166
Target Start/End: Original strand, 18749299 - 18749434
Alignment:
Q  32 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnnnnaatagggggccaaaattgcaacatt 130  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||| ||||||||    
T  18749299 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaatcgcaacatt 18749398  T
Q  131 ttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||| ||| ||||||||| || |||||||||||    
T  18749399 ttgaaacttagagggcgaaaagtgaagtttagccaa 18749434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 32682419 - 32682580
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannn 101  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |       
T  32682419 aactttttgtaaagataaggggtcaaaaaacatatttcctttatgttatgaggtcaaaagagcatatttccctaaacata-ggggtcacttttgctattt 32682517  T
Q  102 nnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
        ||||| |  |||||||||||||||||| |||| ||| ||| ||||| || |||||||||    
T  32682518 ttttaatagagaaccaaaattgcaacattttaaaacttagagggtgaaaagtgaagtttagcc 32682580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35102631 - 35102716
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 86  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35102631 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 35102716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 3118839 - 3118694
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnn 104  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||          
T  3118839 tttttgtaaagataagaggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagagggtcacttttgcca-ttttt 3118741  T
Q  105 naatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
     ||||||||  |||||| | ||||||||||||| |||| ||||||||    
T  3118740 taataggggatcaaaatcgtaacattttgaaacttaggaggcgaaaa 3118694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 22269570 - 22269409
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||      
T  22269570 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaag-ggtcaaaagaacatatttccctaaacata-ggggtcacttttgcca-t 22269474  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
         ||||| |||||||||| |||| |||||||||| ||| || |||||| || ||||||||||    
T  22269473 tttttaatagagggccaaaatcgcaatattttgaaacttagaggacgaaaagtgcagtttagcca 22269409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4371062 - 4370965
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  4371062 caactttttgtaaagataaggggtcaaaggagcatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacatggagggtcacttttgcca 4370965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19282351 - 19282445
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||||| |||||| ||||||||| | |||||||| |||||||||||||    
T  19282351 caactttttgaaaagataaggggtcaaaatgcatatttcccttatgttaggagttcaaaatagcatatttacttaaacataaggggtcacttttg 19282445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18749236 - 18749309
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccct 74  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| || |||||||||||    
T  18749236 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtcaaatgaacatatttccct 18749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 26240109 - 26240025
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgtta-ggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||  |||||||||||||    
T  26240109 aagataaggggtcaaaagatcatatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcacttttg 26240025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 2058992 - 2059124
Alignment:
Q  31 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacatt 130  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||   |||||||||||||||       ||||||||| |||||| ||||||||    
T  2058992 tcatatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcacttttgcca-ttttttaatagggggtcaaaatcgcaacatt 2059090  T
Q  131 ttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    || |||  ||||| |||||||||| | |||||||    
T  2059091 ttaaaatttagggagcgaaaaatgcaatttagcc 2059124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9241816 - 9241732
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 86  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||||||||| || ||||||    
T  9241816 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttagg--gtcaaaagaacatatttccctaagcaaaggggg 9241732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 16415482 - 16415564
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||| ||||||||  ||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||    
T  16415482 aagataagcggtcaaaatatcatatttcccttatgttaggcggtcaaaagaatatatttccctaaacata-ggggtcacttttg 16415564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34528312 - 34528172
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    ||||||||||  |||||||||||||||||| |||||||||  |||||||||| || |||||     ||||||||||||||||| |||||||||||||||     
T  34528312 caactttttgagaagataaggggtcaaaagatcatatttcatttatgttagggggccaaaa-----tatttccctaaacatagagggtcacttttgccat 34528218  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggg 144  Q
           |||| ||||| ||||| ||||||||||||||| ||||||    
T  34528217 tttttttaataaggggctaaaatagcaacattttgaaacttagggg 34528172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 25819930 - 25819993
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 169  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||| || ||||||||||||||    
T  25819930 aatagggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagccaataa 25819993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 12427392 - 12427298
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||||||| |||| ||||   ||||||||| ||||||||   | |||||||||||||||||||||||||| |||| ||||||||||||    
T  12427392 tttttgtaaagataaagggtaaaaaaaacatatttcctttatgttaatggttcaaaagagcatatttccctaaacatgggggatcacttttgcca 12427298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 14572236 - 14572182
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttt 160  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  14572236 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagttt 14572182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 18749155 - 18749097
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||    
T  18749155 aatagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcc 18749097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 24615834 - 24615999
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||| ||||||| || |||||||||  |||||||| | ||||||||| |||||||||||||||||||||||| | |  ||||||||||||  ||      
T  24615834 caacttttagtaaagagaatgggtcaaaaagcatatttctcatatgttagg-ggtcaaaagagcatatttccctaatcgt--ggggtcactttt-tcatt 24615929  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 170  Q
         || | ||||| |||||||||||||||| |||| |||| ||| |||| || ||||||||| |||||    
T  24615930 tttttaacaaggggctaaaattgcaacattttaaaacttaggaggcaaaaagtgaagtttagcctataaa 24615999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 32451972 - 32452030
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||| || |||||||||    
T  32451972 aatagggggtcaaaattgcaacattttgaaacataggggacaaaaagtgcagtttagcc 32452030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 35102549 - 35102491
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||| || | |||||||    
T  35102549 aatagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 35102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 4597463 - 4597418
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  4597463 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaa 4597418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12291557 - 12291618
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaag 61  Q
    ||||||||||  ||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  12291557 caactttttgagaagataaagggtcaaaagatcatatttcccttatgttagggggtcaaaag 12291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 15298730 - 15298778
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 154  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  15298730 aataaggggccaaaatcgcaacattttgaaacatagagggcgaaaaatg 15298778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 35102713 - 35102767
Alignment:
Q  110 gggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||||||||| ||| ||||||||| || |||| ||||    
T  35102713 gggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttgagcc 35102767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 3118926 - 3118981
Alignment:
Q  109 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||   |||||| |||||||||||||||||||| || |||||||||    
T  3118926 agggggccaaaatcataacattatgaaacatagggggcgaaaagtgcagtttagcc 3118981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 8415294 - 8415353
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
    ||||||| || ||||| |||||||| | |||||||||||||||||| || ||||||||||    
T  8415294 aatagggagctaaaatcgcaacattataaaacatagggggcgaaaagtgcagtttagcca 8415353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 12291475 - 12291428
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaat 153  Q
    |||| ||||||||||| ||||||||||||||| |||||| ||||||||    
T  12291475 aataaggggccaaaatcgcaacattttgaaacttaggggacgaaaaat 12291428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 18791603 - 18791642
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacataggggg 145  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  18791603 aatagggggccaaaatcgcaacattttaaaacataggggg 18791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 4013742 - 4013691
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||| ||||||||||||||||||||||    |||||||||||||||||||||||    
T  4013742 ggggtcaaaattgcaacattttgaaactc--ggggcgaaaaatgtagtttagcc 4013691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 19176856 - 19176798
Alignment:
Q  107 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
    |||||||  |||||| |||||||||| |||| ||||||||||||||| || ||||||||    
T  19176856 ataggggatcaaaatcgcaacattttcaaacttagggggcgaaaaatatactttagcca 19176798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 27322113 - 27322174
Alignment:
Q  108 tagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 170  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||| || | ||||||| |||||    
T  27322113 tagggggccaaaattgcaagattttgaaagataggggg-gaaaagtgcactttagcctataaa 27322174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2636941 - 2636865
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaa-gtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    |||||||||||||| ||||||||||||||   ||||||| |||||||||||| || ||||| | ||||||| ||||||    
T  2636941 caactttttgtaaaaataaggggtcaaaatagcatatttaccttatgttagg-ggacaaaaaaacatattttcctaaa 2636865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 6842327 - 6842384
Alignment:
Q  107 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||| ||||||||| ||| ||| ||||| || | |||||||    
T  6842327 atagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 20863868 - 20863897
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag 30  Q
    ||||||||||||||||||||||||||||||    
T  20863868 caactttttgtaaagataaggggtcaaaag 20863897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 20863889 - 20863934
Alignment:
Q  53 ggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||||||| || ||||||||| || ||||||||||||||    
T  20863889 ggtcaaaagagcataatttcctaaacatgggaggtcacttttgcca 20863934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23124860 - 23124889
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag 30  Q
    ||||||||||||||||||||||||||||||    
T  23124860 caactttttgtaaagataaggggtcaaaag 23124889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 27318370 - 27318333
Alignment:
Q  108 tagggggccaaaattgcaacattttgaaacataggggg 145  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  27318370 tagggggccaaaattgcaagattttgaaagataggggg 27318333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14195724 - 14195631
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttag-gaggtcaaaagagcatatttccctaaacatagggggtcactttt 94  Q
    |||||||||||||| ||||||||  |||||  ||||||||||| ||||||| |||   |||||| ||||||||||| |||||  ||||||||||||    
T  14195724 caactttttgtaaaaataaggggctaaaagaccatatttccctcatgttagagagtcaaaaagaacatatttcccttaacat--ggggtcactttt 14195631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 32682414 - 32682386
Alignment:
Q  123 gcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||||||||||||||||||||||||    
T  32682414 gcaacattttgaaacatagggggcgaaaa 32682386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 13397815 - 13397979
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  13397815 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 13397914  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||||||||||||||| |||||||||| ||| ||||||||| || |||||||||    
T  13397915 ttttttaatagggggccaaaattgcaatattttgaaacttagagggcgaaaagtgaagtttagcc 13397979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 43793771 - 43793934
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  43793771 caactttttgtaaatataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccatt 43793870  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||||||||||| ||||||||||||||| |||| ||| |||| || |||||||||    
T  43793871 tttttaatagggggccaaaatcgcaacattttgaaacttaggcggcaaaaagtggagtttagcc 43793934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 41877172 - 41877328
Alignment:
Q  7 tttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnna 106  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  41877172 tttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttta 41877270  T
Q  107 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||| |||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  41877271 atagggagccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 41877328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 25011899 - 25011733
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  25011899 caactttttgtaaagataaggggtcaaaaaacatatcccccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 25011800  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          |||||||||||||||| ||||||||||||||| |||||| |||||| || |||||||||||    
T  25011799 ttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtggagtttagccaa 25011733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 5304487 - 5304649
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  5304487 caactttttgtaaagataaggggtcaaaaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 5304585  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||| ||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  5304586 tttttaatagagggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 5304649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 9195804 - 9195966
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||      
T  9195804 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatg-ggtcaaaagagcatatttccctaaacatagggggtcacttttgtcatt 9195902  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||| ||||||| ||||||||||||||  ||||||||||||| ||  ||||||||    
T  9195903 tttttaataggggaccaaaatcgcaacattttgaaatttagggggcgaaaagtggtgtttagcc 9195966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 35475451 - 35475291
Alignment:
Q  3 actttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnn 101  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||        
T  35475451 actttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata--gggtcacttttgccatttt 35475354  T
Q  102 nnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
        ||||||| |||||||| |||||||||| |||| ||| |||||||||||| |||||||||    
T  35475353 ttttaatagggagccaaaatcgcaacattttaaaacttagagggcgaaaaatgaagtttagcc 35475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4357416 - 4357250
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||      
T  4357416 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagaaggtcaaaagagcatatttccctaaatatagggtgtcacttttgccatt 4357317  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||| || ||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  4357316 ttttttaatagggagctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaa 4357250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15058958 - 15059055
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15058958 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 15059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 55780550 - 55780387
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  55780550 caactttttgtaaagataaggggtcaaaaaacatattttccttaggttagg-ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 55780452  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| |||||||||  |||| || ||||||||||||| |||||||||    
T  55780451 ttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55780387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 55844730 - 55844567
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  55844730 caactttttgtaaagataaggggtcaaaaaacatattttccttaggttagg-ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 55844632  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| |||||||||  |||| || ||||||||||||| |||||||||    
T  55844631 ttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4433323 - 4433488
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc-an 99  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       
T  4433323 caactttttgtaaagataaggggtcaaaaaacatattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccttt 4433422  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 167  Q
          |||| ||||||||||| |||||||||| |||| || |||||||||| || ||||||||||||    
T  4433423 ttttttaata-ggggccaaaatcgcaacattttaaaactta-ggggcgaaaagtgaagtttagccaat 4433488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 2931481 - 2931321
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnn 103  Q
    |||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||          
T  2931481 tttttgtaaagataaggggtcaaaaagcatatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttaccatttttt 2931382  T
Q  104 nnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
      ||||| |  |||||||||||||||||| |||| ||| ||||||||| || |||||||||    
T  2931381 ttaatagagaaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 2931321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13826559 - 13826655
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13826559 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacata-ggggtcacttttgcca 13826655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 41034800 - 41034663
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||      
T  41034800 caactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagatcatatttccctgagcatagggggtcacttttgccatt 41034701  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaac 137  Q
          |||| |||| ||||||||||||||||||||||    
T  41034700 ttttttaataaggggtcaaaattgcaacattttgaaac 41034663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1588553 - 1588645
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 94  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  1588553 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacataggaggtcactttt 1588645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 52838391 - 52838228
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||      
T  52838391 caactttttgtaaagataaggg-tcaaaaagcatatttcccgtatgttaggaggtcaaaagagcatattt-cctaaacatagggggtcatttttgccatt 52838294  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaat 167  Q
         |||| | || |||||| |||||||||| |||| ||| ||||||||| || ||||||||||||    
T  52838293 tttttaata-gaggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccaat 52838228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4098821 - 4098726
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  4098821 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttcccaaaacatagggggtcacttttg 4098726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 6789102 - 6789262
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnn 103  Q
    ||||||||||||||| |||||||||  ||| |||| || ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||          
T  6789102 tttttgtaaagataacgggtcaaaaaacatttttctctcatgttaggaggtcgaaacagcatatttccctaaacatagggggtcacttttgccattttat 6789201  T
Q  104 nnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
      || ||||||||||||| ||||||||||||||| ||  ||||||||| || |||||||||    
T  6789202 ttaacagggggccaaaatcgcaacattttgaaacttaaagggcgaaaagtgaagtttagcc 6789262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19232483 - 19232656
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    |||||||||||||||||||||||| ||||   ||||||| ||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||     
T  19232483 caactttttgtaaagataaggggtaaaaaaaacatattttccttatgttagggagtcaaaagagcatatttccctaaacatatgggatcacttttgccat 19232582  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaatt 172  Q
           |||||| | |||||||  |||||||||||||| |||||||| |||| || ||||||||||| |||||    
T  19232583 tttttttaataggtgaccaaaatcacaacattttgaaacttagggggcaaaaagtggagtttagccaaaaaatt 19232656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 45633601 - 45633438
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    |||||||||  |||||||||||||||||||  ||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||     
T  45633601 caacttttttaaaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagggagtcacttttgccat 45633503  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
           |||| |||| |||||| |||| |||||||||| ||||||||||||| ||||||||||||    
T  45633502 tttttttaata-ggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagcc 45633438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15734562 - 15734403
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttccc-ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    |||||||||||||| || | |||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||||||||||| |||||||||||| ||     
T  15734562 caactttttgtaaacatgacgggtcaaaaggcatatttccccttatgttagg--gtcaaaagaacatatttccctaaacatagagggtcacttttgtcat 15734465  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          ||||| |||||||||| | ||||||||||||| || ||| |||||| |||||||||    
T  15734464 ttttttaatagcgggccaaaatcgtaacattttgaaacttaagggccgaaaagtgtagttta 15734403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27018378 - 27018282
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||||| |||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  27018378 caactttttgtaaggataaggggtcaaaaaacatatttcccttttgttagggggtcaaaagagcatatttccctaaacata-tgggtcacttttgcca 27018282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 51291309 - 51291389
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  51291309 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacat 51291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 25618788 - 25618900
Alignment:
Q  53 ggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||||||||||||||||||||| |||||||||||||||||||        ||||||||| |||||||||||||||||||||| ||| ||||| |||    
T  25618788 ggtcaaaagagcatatttccctaaacttagggggtcacttttgccatttttcttaatagggggtcaaaattgcaacattttgaaacttagagggcgcaaa 25618887  T
Q  152 atgtagtttagcc 164  Q
     || |||||||||    
T  25618888 gtgaagtttagcc 25618900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 24626360 - 24626527
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    ||||||||||  ||||||||| |||||||| |||||||||||||||||||    |||||||||||||||||||||||||     |||||||||||||||     
T  24626360 caactttttgagaagataaggagtcaaaagatcatatttcccttatgttattgagtcaaaagagcatatttccctaaac-----gggtcacttttgccat 24626454  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaat 171  Q
           ||||| || |||||||||||||||||| |||| ||||| || |||| || ||||||||| ||||||    
T  24626455 ttttgttaatagaggtccaaaattgcaacattttaaaacttagggagcaaaaagtgcagtttagcctataaat 24626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2715857 - 2715930
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttcccta 75  Q
    |||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||| ||||||||||||    
T  2715857 caactttttgtaaagataaggggtcaaaaagcatatttcccatatgttagg-ggtcaaaagatcatatttcccta 2715930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9397356 - 9397258
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||||||||||| |||| ||||   ||||||||| |||||||||  ||||||||||||||||||||||| |||| || | ||||||||||||    
T  9397356 caactttttgtaaagataaagggttaaaaaaacatatttcctttatgttagagggtcaaaagagcatatttccctatacatgggagatcacttttgcca 9397258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 25011980 - 25012038
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  25011980 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 25012038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6209381 - 6209475
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  |||||||||||||| ||| |||| |||||||||||||||| ||||||||  ||||| ||||||||||||  |||||||||||||    
T  6209381 caactttttgagaagataaggggtcataagatcatttttcccttatgttagg-ggtcaaaaatgcataattccctaaacatgtggggtcacttttg 6209475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 43793689 - 43793631
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||    
T  43793689 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 43793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15795481 - 15795412
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatattt 70  Q
    |||||||||| ||||||||  ||||||||  | |||||||||||||||||||| ||||||||||||||||    
T  15795481 caactttttgaaaagataaaaggtcaaaaagcctatttcccttatgttaggagttcaaaagagcatattt 15795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 4433241 - 4433183
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| || |||||||||    
T  4433241 aataaggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 4433183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 5304405 - 5304339
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaatt 172  Q
    ||||| ||||||||||   ||||||||||||||||||||||||||| || | |||||||||||||||    
T  5304405 aatagagggccaaaatcaaaacattttgaaacatagggggcgaaaagtgcactttagccaataaatt 5304339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 13394594 - 13394534
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||| || | |||||||||    
T  13394594 aatagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13394534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 13397733 - 13397673
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||| || | |||||||||    
T  13397733 aatagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13397673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43336080 - 43336156
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    ||||||||||||||||||| ||||||||  || ||||||| | | | ||| ||||||||||| ||||||||||||||    
T  43336080 caactttttgtaaagataaagggtcaaacatcttatttccataaagatagaaggtcaaaagaacatatttccctaaa 43336156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 48158729 - 48158681
Alignment:
Q  32 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||    
T  48158729 catatttcccttatgttagagggtcaaaagatcatatttccctaaacat 48158681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 13826478 - 13826420
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| |||||| |||||||||| |||||||||||||||||| || | |||||||    
T  13826478 aatagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagcc 13826420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 18259357 - 18259415
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| ||||||||||||||  ||| ||||||||| || |||||||||    
T  18259357 aatagggggccaaaatcgcaacattttgaaatttagagggcgaaaagtgaagtttagcc 18259415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 4357497 - 4357542
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||    
T  4357497 aatagggggtcaaaatcgcaacattttgaaatatagggggcgaaaa 4357542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 15058873 - 15058820
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||| |||||||||||||||||||||||| |||| || | |||||||    
T  15058873 ggggccaaaatcgcaacattttgaaacatagggggccaaaagtgcactttagcc 15058820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16291821 - 16291898
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    ||||||||||||||||||||||| |||||| || ||||||||| | | |||  ||  |||||||||||||||||||||    
T  16291821 caactttttgtaaagataaggggacaaaagatcttatttccctaaagatagagggctaaaagagcatatttccctaaa 16291898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 9397435 - 9397495
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||||||||||  ||||||||| |||| ||||||| ||||| || |||||||||||    
T  9397435 aatagggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagccaa 9397495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23362595 - 23362519
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    |||||||||||||||||||| |   ||||  ||||||| ||||||||||   |||||||||| ||||||||||||||    
T  23362595 caactttttgtaaagataagagactaaaaagcatattttccttatgttaaagggtcaaaagaacatatttccctaaa 23362519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 2931576 - 2931623
Alignment:
Q  117 aaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||| ||||||||| |||||||||||||||||| || |||||||||    
T  2931576 aaaattacaacattttaaaacatagggggcgaaaagtgcagtttagcc 2931623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 27018460 - 27018499
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacataggggg 145  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  27018460 aatagggggtcaaaatcgcaacattttgaaacataggggg 27018499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 6319047 - 6319081
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacata 140  Q
    |||||| ||||||||||||||||||||||||||||    
T  6319047 aataggtggccaaaattgcaacattttgaaacata 6319081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 19232401 - 19232343
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||| |||||||||||||||||| | |||||||||||||| ||| || | |||||||    
T  19232401 aataggaggccaaaattgcaacattataaaacatagggggcggaaagtgcactttagcc 19232343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 25618686 - 25618648
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggg 144  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  25618686 aataggggaccaaaattacaacattttgaaacatagggg 25618648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 47869899 - 47869957
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||  ||||||||||||| ||||||||| |||| || | |||||||    
T  47869899 aatagggggccaaaatcacaacattttgaaatatagggggcaaaaattgcactttagcc 47869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 7035904 - 7035941
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacataggg 143  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  7035904 aatagggggccaaaattgctacattttgaaacctaggg 7035941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 17138540 - 17138589
Alignment:
Q  117 aaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||| |||||||||| |||| ||||||||||||| || |||||||||||    
T  17138540 aaaatcgcaacattttaaaacttagggggcgaaaagtggagtttagccaa 17138589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 20919384 - 20919335
Alignment:
Q  115 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||| ||||||||||||||| |||||| |||||| || |||||||||    
T  20919384 ccaaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagcc 20919335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 41034880 - 41034925
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||| |||||||||||||||||| ||| ||||||| ||||||    
T  41034880 aataggggaccaaaattgcaacattttaaaatataggggacgaaaa 41034925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 25618769 - 25618809
Alignment:
Q  3 actttttgtaaagataaggggtcaaaag-tcatatttccct 42  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  25618769 actttttgtaaagataaggggtcaaaagagcatatttccct 25618809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 25557015 - 25557178
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  25557015 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 25557114  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||||| |||||| ||||||||||||||| ||||||||||||| |  |||||||||    
T  25557115 tttttaatagggggtcaaaatcgcaacattttgaaacttagggggcgaaaagtagagtttagcc 25557178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 245758 - 245599
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  245758 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 245660  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
         ||||||||||||||||||||| |||||||||| ||| ||||||||| || ||||||    
T  245659 tttttaatagggggccaaaattgcaatattttgaaacttagagggcgaaaagtgaagttta 245599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 16901137 - 16901274
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  16901137 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 16901235  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacat 139  Q
         ||||||||| |||||| |||||||||||||||||    
T  16901236 tttttaatagggggtcaaaatcgcaacattttgaaacat 16901274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 18695167 - 18695002
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  18695167 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 18695069  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||||| |||||| |||||||||| |||| ||| ||||||||| || |||||||||||    
T  18695068 ttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagccaa 18695002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26639177 - 26639341
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  26639177 caactttttgtaaagataaggggtcaaaacgcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccatt 26639276  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          || ||||| ||||||| ||||||||||||||| ||| || |||||| || |||||||||    
T  26639277 ttttttaacaggggaccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 26639341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 38408792 - 38408629
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||      
T  38408792 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagt-ggtcaaaagagcatatttctctaaacatagggggtcacttttgccatt 38408694  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| |||| |||||||||| |||||| |||||| || |||||||||    
T  38408693 ttttttaatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtggagtttagcc 38408629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 10379445 - 10379283
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||| |      
T  10379445 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg-ggtcaaaagagcatattttcctaaacataggaggtcacttttgctatt 10379347  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||| ||||||||||||| |||||||| |||| |||||| |||||||||  ||||||||    
T  10379346 tttttaataaggggccaaaattgtaacattttaaaacttaggggacgaaaaatggggtttagcc 10379283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23765530 - 23765693
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||  | ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||      
T  23765530 caactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttatcatt 23765628  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||||||||||||||||||||| |||| ||| ||||||||| || |||||||||    
T  23765629 ttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 23765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23815378 - 23815541
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||  | ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||      
T  23815378 caactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttatcatt 23815476  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||||||||||||||||||||| |||| ||| ||||||||| || |||||||||    
T  23815477 ttttttaatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 23815541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 31055458 - 31055551
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  31055458 tttttgtaaagataaggggtcaaaaaacatatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 31055551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 20124331 - 20124255
Alignment:
Q  189 atttgagtataaaaatcctatttgaagtaaaaataactacaaatcatcaattttatattaatgttggaaatgtaacc 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20124331 atttgagtataaaaatcctatttgaagtaaaaataactacaaatcatcaattttatattaatgttggaaatgtaacc 20124255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 36641307 - 36641143
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    ||||||||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||      
T  36641307 caactttttataaagataacgggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacataggggctcacttttgccatt 36641208  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||| |||||||  ||| |||||||||| |||  |||||||| || |||||||||    
T  36641207 ttttttaataggggaccaaaatcacaatattttgaaacttagaaggcgaaaagtgaagtttagcc 36641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10293227 - 10293324
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  10293227 caactttttggaaagataaggagtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttcccaaaacatagggggtcatttttgcca 10293324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19169507 - 19169410
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  19169507 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaagaggtcaaatgagcatattttcctaaacataggggatcacttttgcca 19169410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 166
Target Start/End: Original strand, 40428783 - 40428943
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnn 103  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||||||||          
T  40428783 tttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagaacatatttccctaaacaca-ggggtgacttttgccatatttt 40428881  T
Q  104 nnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
      |||| |||| |||||| ||||||||||||||| ||| ||||||||| || |||||||||||    
T  40428882 ttaata-ggggtcaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccaa 40428943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 8645931 - 8645797
Alignment:
Q  31 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnnnnaatagggggccaaaattgcaacat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||        ||||||||| |||||| |||||||    
T  8645931 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttgccattttttttaatagggggtcaaaatcgcaacat 8645832  T
Q  130 tttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||  || ||||||||| || |||||||||    
T  8645831 tttgaaactaagagggcgaaaagtgaagtttagcc 8645797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 16307616 - 16307712
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggagg-tcaaaagagcatatttccctaaacatagggggtcacttttgc 96  Q
    ||||||||||||||||||||| |||||||  ||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  16307616 caactttttgtaaagataaggagtcaaaaaacatattttccttatgttaggggggtcaaaagagcatatttccctaaacatagggggtcacttttgc 16307712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38476609 - 38476703
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 94  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||    
T  38476609 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtcaaaagagcatatttccctaaatatagggggtcactttt 38476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 17704727 - 17704882
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||||||||||||||| |||||||||   ||||||||||||||||| | |||||||||||||||||| |||||||||   |||| |||||||| |      
T  17704727 caactttttgtaaagataaagggtcaaaaagtatatttcccttatgttatg-ggtcaaaagagcatattttcctaaacat---gggttacttttgctatt 17704822  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttt 160  Q
         |||||||||||||||| |||| |||||||||| |||||| |||||| ||||||||    
T  17704823 tttttaatagggggccaaaatcgcaatattttgaaacttaggggacgaaaagtgtagttt 17704882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 35302085 - 35302219
Alignment:
Q  31 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacatt 130  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||       ||||| ||| |||||| ||||||||    
T  35302085 tcatatttacattatgttagggggtcaaaagagcatatttccctaaatat-gggggtcacttttgccatttttataatagagggtcaaaatcgcaacatt 35302183  T
Q  131 ttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||| || |||| |||||||| |||||||||||    
T  35302184 ttgaaacttaaggggagaaaaatgcagtttagccaa 35302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 37961388 - 37961549
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    ||||||||||  ||| |||||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||| |     
T  37961388 caactttttgagaagttaaggggtcaaaagatcatttttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgggggatcacttttgctat 37961487  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
           |||| || |||||||||||||||||||||||| ||||||| ||||| || ||||||    
T  37961488 tttttttaata-ggagccaaaattgcaacattttgaaacttagggggtgaaaagtgcagttta 37961549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 15885306 - 15885465
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannn 101  Q
    ||||||||||||||||||||| |||| |  |||||||||||||||||| ||||||||||||| |||||||| ||||||||  ||| || ||||||||       
T  15885306 aactttttgtaaagataaggg-tcaacaaacatatttcccttatgttaagaggtcaaaagagaatatttccataaacataaagggacatttttgccattt 15885404  T
Q  102 nnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 162  Q
        |||| ||| ||||||| ||||||||||||||| |||||| | |||| || |||||||    
T  15885405 ttttaataagggaccaaaatagcaacattttgaaacttaggggacaaaaagtgcagtttag 15885465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23040088 - 23040182
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttagg--aggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||   ||||||||||||    
T  23040088 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtcaaaagagcatatttccctaaacat---gggtcacttttg 23040182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 7835867 - 7835777
Alignment:
Q  7 tttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||  ||||||| |||||||||| | |||||||||||||||||||||||||||||||  | |||||||||||    
T  7835867 tttgtaaagataaggggtcaaaaaacatattttccttatgttatg-ggtcaaaagagcatatttccctaaacataggatgccacttttgcca 7835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 31648174 - 31648056
Alignment:
Q  46 gttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacattttgaaacataggggg 145  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||||       |||||||||| ||||| ||||||||||||||  || |||     
T  31648174 gttagggggtcaaaaaagcatatttccctaaacataaggggtcacttttgccatttttttaatagggggcgaaaatcgcaacattttgaaatttatggga 31648075  T
Q  146 cgaaaaatgtagtttagcc 164  Q
    |||||| || |||||||||    
T  31648074 cgaaaagtggagtttagcc 31648056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 31055373 - 31055315
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||    
T  31055373 aatagggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcc 31055315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34125224 - 34125130
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 94  Q
    ||||||||||  |||||||| ||||||| | |||||||| |||||||||||| | ||||||||||||||||||||||||||   |||||||||||    
T  34125224 caactttttgagaagataagaggtcaaatgatcatattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggtcactttt 34125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 41663689 - 41663756
Alignment:
Q  26 aaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||    
T  41663689 aaaaatcatatttcccttatgttatggggtcaaaagagcatatttccctaaacat--ggggtcacttttg 41663756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 23765473 - 23765420
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23765473 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 23765420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 23815321 - 23815268
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23815321 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagcc 23815268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17825637 - 17825716
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||  ||||||| ||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  17825637 caactttttgacaagataaagggtcaaaagaacatatttctcttatgttagg-ggtcaaaagagcatatttccctaaacat 17825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 23040196 - 23040272
Alignment:
Q  19 aggggtcaaaag-tcatatttcccttatgttaggagg-tcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||  ||| |||||||||||||    
T  23040196 aggggtcaaaaggtcatatttcccttatgttaggggggtcaaaagagcatatttccctaa--atatggggtcacttttg 23040272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 462930 - 462834
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| |||  |||||||||  |||||||||||||||||| | |||| ||||||||||    
T  462930 caactttttgtaaagataaggggtcaaaagaacatatttctcttatatta-taggtcaaaaaggcatatttccctaaacat-gagggttacttttgcca 462834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7187353 - 7187258
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||| ||||  ||||| ||  |||||||||||||||||||  ||||||||||  ||||||||||||||||  ||||||| ||||||||    
T  7187353 caactttttgtaaaaataattggtcataaaacatatttcccttatgttagagggtcaaaagaatatatttccctaaacat--ggggtcaattttgcca 7187258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 2373278 - 2373215
Alignment:
Q  31 tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||| ||||    
T  2373278 tcatatttcccttatgttatg-ggtcaaaagagcatattttcttaaacatagggggtcacgtttg 2373215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20653984 - 20653905
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||  |||||||| | | |||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  20653984 caactttttgagaagataagagataaaaagttcatatttcacttatgttagg-ggtcaaaagagcatatttccctaaacat 20653905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 16901055 - 16900997
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| |||||| |||||||||||||||||||| |||||||| || |||||||||    
T  16901055 aatagggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcc 16900997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 18695248 - 18695306
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| || | |||||||    
T  18695248 aatagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcc 18695306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 25556934 - 25556896
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggg 144  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25556934 aatagggggccaaaattgcaacattttgaaacatagggg 25556896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 32465979 - 32466123
Alignment:
Q  5 tttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnn 104  Q
    |||| ||||||||||||||||||||  | || ||  ||||| ||||| |||||||||||||||||| ||||||||| | |  ||| ||||||||          
T  32465979 ttttggtaaagataaggggtcaaaaaacttaattatcttatattagg-ggtcaaaagagcatattttcctaaacat-gagaatcatttttgccacttttt 32466076  T
Q  105 naatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
     ||||||||  |||||| ||||||||||||||| |||||| ||||||    
T  32466077 taataggggatcaaaatcgcaacattttgaaacttaggggacgaaaa 32466123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 40428697 - 40428652
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  40428697 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaa 40428652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 31576551 - 31576491
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||  ||||||||||||||||||||||| |||||| |||||| || |||||||||||    
T  31576551 aatagggttccaaaattgcaacattttgaaacttaggggtcgaaaagtgcagtttagccaa 31576491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 31648237 - 31648288
Alignment:
Q  113 ggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| |||||||||||||||||||||| |||||| || |||||||||    
T  31648237 ggccaaaatcgcaacattttgaaacataggggacgaaaagtgcagtttagcc 31648288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 36641403 - 36641444
Alignment:
Q  125 aacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  36641403 aacattttgaaacatagggggcgaaaagtgcagtttagccaa 36641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 20654040 - 20654107
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaattt 173  Q
    |||||| |||||||||  |||||||||||||| |||||| |||||| || ||||||||| | ||||||    
T  20654040 aataggaggccaaaatcacaacattttgaaacttaggggtcgaaaagtgcagtttagcctaaaaattt 20654107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 24025079 - 24025036
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaa 149  Q
    |||||||||||||||| |||| |||||||||| |||||||||||    
T  24025079 aatagggggccaaaatcgcaatattttgaaacttagggggcgaa 24025036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 4800981 - 4800935
Alignment:
Q  117 aaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    ||||| |||||||||| |||| |||||||||||||||| ||||||||    
T  4800981 aaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagc 4800935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8673996 - 8674038
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttccct 42  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  8673996 caactttttgtaaagataaggggtcaaaagagcatatttccct 8674038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 26639095 - 26639037
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||| | ||||||  |||||||||||||||||||||||||||| || | |||||||    
T  26639095 aatagggagtcaaaatcacaacattttgaaacatagggggcgaaaagtgcactttagcc 26639037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 10379535 - 10379584
Alignment:
Q  115 ccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| | ||||||| |||||||||| || |||||||||    
T  10379535 ccaaaattgcaacattataaaacataaggggcgaaaagtgcagtttagcc 10379584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19078065 - 19078227
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  19078065 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 19078163  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||||||||||||||||||||||||||||||| |||| |||| || || ||||||    
T  19078164 tttttaatagggggccaaaattgcaacattttgaaacatagagggcaaaaagtgcagcttagcc 19078227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19125955 - 19126117
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  19125955 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 19126053  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||||||||||||||||||||||||||||||||||| |||| |||| || || ||||||    
T  19126054 tttttaatagggggccaaaattgcaacattttgaaacatagagggcaaaaagtgcagcttagcc 19126117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24962117 - 24961953
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  24962117 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 24962018  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||||||||||  |||||||||||||| ||| ||||||||| || |||||||||    
T  24962017 ttttttaatagggggccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcc 24961953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 46432356 - 46432522
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  46432356 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 46432455  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          |||||||||||||||| ||||||||||||||| || |||||||||| || | |||||||||    
T  46432456 ttttttaatagggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtggactttagccaa 46432522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 24196425 - 24196261
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||      
T  24196425 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacatatggggtcacttttgccatt 24196326  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||| |||||||||| ||||||||||||||| ||||||||||||| || |||||||||    
T  24196325 ttttttaatagagggccaaaatcgcaacattttgaaacttagggggcgaaaagtggagtttagcc 24196261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3616963 - 3616799
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||      
T  3616963 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgtgaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgccatt 3616864  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  3616863 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 3616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4059662 - 4059826
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||      
T  4059662 caactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgccatt 4059761  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||| ||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  4059762 ttttttaatagggggctaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 4059826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 43706794 - 43706959
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||      
T  43706794 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatg-ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 43706892  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          |||||||||||||||| |||||||||| |||  |||||||| |||| || |||||||||||    
T  43706893 ttttttaatagggggccaaaatcgcaacattttaaaaattagggggcaaaaagtggagtttagccaa 43706959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 24749962 - 24749810
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-- 98  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||      
T  24749962 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 24749863  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
           ||||| |||||||||| ||||||||||||||| ||| || ||||||    
T  24749862 tttttttaatagtgggccaaaatcgcaacattttgaaacttagaggacgaaaa 24749810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 28920799 - 28920955
Alignment:
Q  3 actttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnn 101  Q
    |||||||||||||||||||||||||||  ||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  28920799 actttttgtaaagataaggggtcaaaaagcatatt------atgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttt 28920892  T
Q  102 nnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
        |||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||    
T  28920893 ttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagcc 28920955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29676243 - 29676072
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    ||||||||| |||||||||||||||||||  |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| |      
T  29676243 caactttttataaagataaggggtcaaaaagcatatttcacttatgttaggagatcacaagagcatatttccctaaacataggggatcacttttgctatt 29676144  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaat 171  Q
          |||| |||||| |||||||||||||||||||| ||| ||||||||| || ||||||||| ||||||    
T  29676143 ctttttaatatggggcctaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctataaat 29676072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 48472003 - 48472167
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||      
T  48472003 caactttttgtaaagataaggggtcaaaaagcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcaattttgccatt 48472102  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||  |||| |||||||||| |||||||||| ||| ||||||||| ||  ||||||||||    
T  48472103 ttttttaata--gggctaaaattgcaatattttgaaacttagagggcgaaaagtgatgtttagccaa 48472167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 51719262 - 51719424
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||      
T  51719262 caactttttgtaaagataaggggtaaaaaa-catattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcacttttgccatt 51719360  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||| |||||||| ||||||||||||||| |||| | | |||| || |||||||||    
T  51719361 tttttaatagggagccaaaatcgcaacattttgaaacttaggtgacaaaaagtggagtttagcc 51719424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18606823 - 18606987
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  |||||||||||||||||| || ||||| |||||||||| | ||||||||||||||||||||||||||||  |||||||||||| |||     
T  18606823 caactttttgagaagataaggggtcaaaagatcgtattttccttatgttatggggtcaaaagagcatatttccctaaacatgaggggtcactttttccag 18606922  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||| ||||||  ||||||||| |||| |||||| |||||| ||||||||||||    
T  18606923 ttttttaatagggggtcaaaatcacaacattttaaaacttaggggtcgaaaagtgtagtttagcc 18606987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 2657652 - 2657815
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    |||||||||  |||||||||||||||||||  ||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||     
T  2657652 caacttttttaaaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagggagtcacttttgccat 2657750  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
           |||| |||| |||||| |||| |||||||||| ||||||||||||| ||||||||||||    
T  2657751 tttttttaata-ggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagcc 2657815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 21148126 - 21148048
Alignment:
Q  18 aaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21148126 aaggggtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 21148048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 10684958 - 10684792
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggagg-tcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||  |||||||||||||||||| ||||||||  ||||||||||| || |||| |||| ||||||||||||||| | ||||||||||||||||    
T  10684958 caactttttgagaagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttccctaaaca-atggggtcacttttgcca 10684860  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
           |||||||| | |||||||||||||||| |||| || ||||||||||||  |||||||||||    
T  10684859 tttttttaataggggactaaaattgcaacattttaaaacttaaggggcgaaaaatacagtttagccaa 10684792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16551783 - 16551881
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||  |||||||||||||||||| ||||||||  || |||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  16551783 caactttttgagaagataaggggtcaaaagatcatatttgtctgatgttagggggtcaaaagagcatatttccctaaacattgggggtcacttttgcca 16551881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 2425388 - 2425224
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    |||||||||||||||||||||| | ||||   |||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||     
T  2425388 caactttttgtaaagataagggttaaaaaaaacatatttcccttatgttagagggtcaaaagagcata-ttccctaaacata-ggggtcacttttgccat 2425291  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
           ||||||||| |||||| ||||||||||||||| |||| ||| |||| || ||||||||||    
T  2425290 tttttttaatagggggtcaaaatcgcaacattttgaaacttaggtggcaaaaagtggagtttagcca 2425224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 29182152 - 29182234
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  29182152 aagataaggggtcaaaagatcatatttcccttatgttagg-ggtcaaaagagcatatttctctaaacataaggggtcacttttg 29182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 22786194 - 22786097
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||  |||||||||||||||||| ||||||||| |||||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||    
T  22786194 caactttttgagaagataaggggtcaaaagatcatatttcacttatgttag-atgtcaaaagagcatatttccctaaacatgggggctcacttttgcca 22786097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27092992 - 27093070
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaaca 79  Q
    |||||||||||||||||||||||||||||  |||||||| | ||| ||||| |||||||||||||||||||||||||||    
T  27092992 caactttttgtaaagataaggggtcaaaaaacatatttcacatatattagggggtcaaaagagcatatttccctaaaca 27093070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4455182 - 4455277
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  |||||||| ||||||||  ||||||||||||||||||| | |||||||||||||||||| ||||||||| |||| |||||||||    
T  4455182 caactttttgagaagataagtggtcaaaaaatcatatttcccttatgttacggggtcaaaagagcatattttcctaaacattggggatcacttttg 4455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 3617044 - 3617104
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||    
T  3617044 aatagggggcgaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagccaa 3617104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 47685265 - 47685186
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||||||| |||||||||||||  ||||||| |||||||||||| | |||||| ||||||||||| |||||||    
T  47685265 caactttttgtaaaggtaaggggtcaaaaaacatattttccttatgttaggggatcaaaatagcatatttccttaaacat 47685186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 24962199 - 24962259
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||    
T  24962199 aatagggggccaaaactgcaacattttgaaacatagggggcgaaaagtacagtttagccaa 24962259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 31084753 - 31084844
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 94  Q
    ||||||||||||||||||||||||||||  ||||||| || ||||||||| |||||||| |  |||||||| |||| ||| ||||||||||||    
T  31084753 aactttttgtaaagataaggggtcaaaaagcatattttccatatgttagggggtcaaaatattatatttccataaaaata-ggggtcactttt 31084844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 9387846 - 9387760
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggagg-tcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||| |||||||||| | ||||||||||||||||||| || |||||||||||||||||| ||||||| |||||| ||||||||||    
T  9387846 aagataaagggtcaaaagattatatttcccttatgttaggggggtcaaaagagcatatttccttaaacat-gggggttacttttgcca 9387760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 4059580 - 4059522
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| || | |||||||    
T  4059580 aatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 4059522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 51719181 - 51719123
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| || |||||||||    
T  51719181 aatagggggccaaaattgcaacattatgaaacatagagggcgaaaagtgcagtttagcc 51719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 24750020 - 24750073
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  24750020 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 24750073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 43706712 - 43706655
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| || ||||||||    
T  43706712 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagc 43706655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 50334776 - 50334719
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||||    
T  50334776 aatagggggccaaaattgcaacattttaaaacttagggggcgaaaagtggagtttagc 50334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2260518 - 2260611
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  |||||||||||| ||||  ||||||||||||||| ||| | |||||||| |||||||||| ||||||||  |||||||||||||    
T  2260518 caactttttgagaagataaggggttaaaatatcatatttcccttatattatggggtcaaaaaagcatatttcactaaacat--ggggtcacttttg 2260611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 16972003 - 16971935
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||| | |||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  16972003 aagataaagagtcaaaaggtcatatttcccttatgttagggggtctaaagagcatatatccctaaacat 16971935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 50334811 - 50334869
Alignment:
Q  107 atagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||    
T  50334811 atagggggccaaaattacaacattttgaaacata-ggggcgaaaaatacagtttagccaa 50334869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 2425469 - 2425527
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||| || |||||||||    
T  2425469 aatagggggccaaaatcgcaacattatgaaacatagggggcaaaaagtgcagtttagcc 2425527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 24196507 - 24196565
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||||| ||||||||| |||||||| || |||||||||    
T  24196507 aatagggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcc 24196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 46432274 - 46432216
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| || | |||||||    
T  46432274 aatagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 46432216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 16551702 - 16551657
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||    
T  16551702 aatagggggccaaaattgcaacattttgaaacttagagggcgaaaa 16551657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 48471921 - 48471876
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  48471921 aatagggggccaaaatcgcaacattttgaaacataggggacgaaaa 48471876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 28552363 - 28552299
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 170  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||| || | ||||| |||||||    
T  28552363 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtgcactttagtcaataaa 28552299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 10685012 - 10685063
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttag 162  Q
    |||||||||||| ||| |||||||||| |||||||||||||||| |||||||    
T  10685012 ggggccaaaattacaatattttgaaacttagggggcgaaaaatgcagtttag 10685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21185368 - 21185278
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 94  Q
    ||||||||||  |||||| ||||||||||| |||||||| | |||||||| | |||||||||| |||||||||||||||||  ||||||||||||    
T  21185368 caactttttgagaagatagggggtcaaaagatcatattttc-ttatgttaag-ggtcaaaagaacatatttccctaaacat--ggggtcactttt 21185278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 28750437 - 28750346
Alignment:
Q  6 ttttgtaaagataaggggtcaaaagtcatatttccc-ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgc 96  Q
    |||| |||||||||| || |||||  ||| |||||| |||||||||  ||||||||||||||||||  ||||||||  ||||||||||||||    
T  28750437 ttttataaagataagaggccaaaaaacatttttccccttatgttagagggtcaaaagagcatatttttctaaacatgaggggtcacttttgc 28750346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 16972096 - 16972154
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||| ||||| |||||||||| |||| ||||||||||||| || |||||||||    
T  16972096 aatagggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcc 16972154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 27092906 - 27092853
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||| | |||||||||||||||||||||||| || || |||||||||    
T  27092906 ggggccaaaatcgtaacattttgaaacatagggggcgagaagtgcagtttagcc 27092853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 43914994 - 43914920
Alignment:
Q  77 acatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||| |||||||||||||||||       |||||||||||||||||||||| |||  |||| |||||||||||||    
T  43914994 acatggggggtcacttttgccatttttttaatagggggccaaaattgcaacctttgcaaacttagggggcgaaaa 43914920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 19077984 - 19077924
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||| | ||||||  |||||||| ||||||||||| |||||| ||||||||||||||    
T  19077984 aataggggacaaaaattataacattttaaaacataggggacgaaaagtgtagtttagccaa 19077924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 19125874 - 19125814
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||| | ||||||  |||||||| ||||||||||| |||||| ||||||||||||||    
T  19125874 aataggggacaaaaattataacattttaaaacataggggacgaaaagtgtagtttagccaa 19125814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 16878931 - 16878993
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaata 168  Q
    |||||||| |||||||  |||||||||||||| |||| |||||||| || ||||||| |||||    
T  16878931 aataggggaccaaaatctcaacattttgaaacttaggtggcgaaaagtgcagtttagacaata 16878993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 26605418 - 26605494
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||||| |||||   ||||||  ||||||| | |||||||||| |||||||| |||||||||||||||||||    
T  26605418 aactttttgtaaaaataagatatcaaaaaacatattttc-ttatgttagg-ggtcaaaatagcatatttccctaaacat 26605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 28919073 - 28919015
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||| ||||||||||| |||||||||||||||||| |||| |||| |  |||||||||    
T  28919073 aatagagggccaaaattacaacattttgaaacatagagggcaaaaagtacagtttagcc 28919015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 30105492 - 30105443
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgt 155  Q
    |||||||||| ||||||||||| |||  |||| |||||||||||||||||    
T  30105492 aatagggggcaaaaattgcaacctttgcaaacttagggggcgaaaaatgt 30105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 6285224 - 6285176
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 154  Q
    |||||||| ||||||| ||||||||||||||| ||||| || |||||||    
T  6285224 aataggggaccaaaatcgcaacattttgaaacttagggcgcaaaaaatg 6285176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 30784404 - 30784569
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  30784404 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcacttttgccatt 30784503  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcca 165  Q
          |||| ||||||||||| ||||||||||||||| ||| ||||||||| || ||||||||||    
T  30784504 ttttttaataaggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcca 30784569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17648407 - 17648243
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  17648407 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 17648308  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||| ||||||||  |||||||||||||| ||| ||||||||| || |||||||||    
T  17648307 ttttttaatagggagccaaaatcacaacattttgaaacttagagggcgaaaagtgaagtttagcc 17648243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 8802540 - 8802708
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||      
T  8802540 caactttttgtaaagataaggggtcaaaaagc-tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgccatt 8802638  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 169  Q
          |||||||||||||||| ||||||||||||||| ||| ||||||||| |  ||||||||||||||    
T  8802639 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtaaagtttagccaataa 8802708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4519007 - 4519171
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||      
T  4519007 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggagatcaaaagagcatatttccctaaacatagggggtcacttttgccatt 4519106  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||| |||||||| ||||||||||||||| ||| || |||||| || |||||||||    
T  4519107 ttttttaatagggagccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 4519171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 12723401 - 12723567
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||      
T  12723401 caactttttgtaaagataacgggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttctctaaacatagggggtcatttttgccatt 12723500  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          |||||||||||||||| ||||||||||||||| ||| ||||||||| || ||||| |||||    
T  12723501 ttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttggccaa 12723567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19924429 - 19924263
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||      
T  19924429 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacatagggggtcacttttgccatt 19924330  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          |||| |||||||||||||||||||||| |||| ||| ||||||||| ||  ||||||||||    
T  19924329 ttttttaataaggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaggtttagccaa 19924263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 38630219 - 38630058
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||      
T  38630219 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcacttttaccatt 38630120  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          ||||||||  |||||| ||||||||||||||| ||| |||||||||||| ||||||    
T  38630119 ttttttaataggggatcaaaatcgcaacattttgaaacttagagggcgaaaaatgaagttta 38630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19391527 - 19391624
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19391527 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 19391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 21666414 - 21666579
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    ||||||| | |||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||      
T  21666414 caactttatctaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaagagagcatatttccctaaacatggggggtcacttttgccatt 21666513  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
         |||||||||||||||| |||||||||||||||  ||||||| |||| || |||| ||||||    
T  21666514 tttttaatagggggccaaaatcgcaacattttgaaactaagggggcaaaaagtgcagttcagccaa 21666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 33895538 - 33895373
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        
T  33895538 caactttttgtaaagataaggggttaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgctttt 33895439  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
         |||| ||  |||||||||||||||||| |||| ||| ||||||||| || |||||||||||    
T  33895438 tttttaatatggaaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagccaa 33895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 44147130 - 44146972
Alignment:
Q  6 ttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-nnnnnn 104  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||           
T  44147130 ttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaatagcatatttccctaaacata-ggggtcacttttgccattttttt 44147032  T
Q  105 naatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
     |||||||||||||||| ||||||||||||||| | | ||||||||| || |||||||||    
T  44147031 taatagggggccaaaatcgcaacattttgaaacttggagggcgaaaagtgaagtttagcc 44146972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 5192411 - 5192572
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||      
T  5192411 caactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgccatt 5192510  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          ||||| || ||||||| |||||||||| |||| ||| ||||||||| || ||||||    
T  5192511 ttttttaatagaggaccaaaatcgcaacattttaaaacttagagggcgaaaagtgaagttta 5192572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 21929974 - 21930105
Alignment:
Q  32 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacattt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||| |||||| |||||||||    
T  21929974 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattt 21930072  T
Q  132 tgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||| ||| ||||||||| || |||||||||    
T  21930073 tgaaacttagagggcgaaaagtgaagtttagcc 21930105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22452313 - 22452477
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc-an 99  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||       
T  22452313 caactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttgccgtt 22452412  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||| ||||||| |||| |||||||||  |||||||| |||| || |||||||||    
T  22452413 ttttttaataggggaccaaaatcgcaatattttgaaatttagggggctaaaagtggagtttagcc 22452477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 32400462 - 32400624
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||      
T  32400462 caactttttgtaaagataaatggtcaaaaggcatatttcccttatgttagggggtcaaaagcgcatatttcactaaacatagggggtcacttttgccatt 32400561  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         |||| | || |||||||| |||||||| |||  ||||||||||||| |  |||||||||    
T  32400562 tttttaata-gaggtcaaaattgtaacattttaaaatttagggggcgaaaagtagagtttagcc 32400624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 4807740 - 4807836
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatag-ggggtcacttttgc 96  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  4807740 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagaacatatttccttaaacatagaggggtcacttttgc 4807836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18881643 - 18881805
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||| || |||||| |||||||||||||||||||   |||||||||||||||     
T  18881643 caactttttgtaaagataaggggtcaaaagagcgtatttcccttatgttagaagctcaaaatagcatatttccctaaacat---gggtcacttttgccat 18881739  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
           ||||||||| ||||||||||||||| | |||| ||||||||||||| ||| ||||||||    
T  18881740 tttttttaatagggggtcaaaattgcaacattataaaacttagggggcgaaaagtgttgtttagcc 18881805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3380362 - 3380199
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||| ||||||| ||||||||  ||||||||||||||| |||  || ||||||||||||||| ||||||||| |||||||||| ||  ||      
T  3380362 caactttttgtagagataagaggtcaaaaaacatatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcactattttcatt 3380263  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
         ||||||| |||||||| ||||||||||||||| ||  ||| |||||||| |||||||||    
T  3380262 tttttaatagggagccaaaatcgcaacattttgaaacttaaagggtgaaaaatgcagtttagcc 3380199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 4423173 - 4423262
Alignment:
Q  5 tttttgtaaagataaggggtcaaaag-tcatatttcccttatgtta-ggaggtcaaaagagcatatttccctaaacatagggggtcactt 92  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||||||| ||||||| |||||||||||    
T  4423173 tttttgaaaagataaggggtcaaaagatcatatttcccttatgttatggaggttaaaagaacatatttccataaacatggggggtcactt 4423262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1824769 - 1824609
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  ||||||||  || ||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||     
T  1824769 caactttttgagaagataagaagttaaaagatcatattttccttatgttagg-ggtcaaaagagcatatttccctaaacat--ggggtcacttttgccat 1824673  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||  ||||| | ||||||||| |||| |||||||| ||||||  |||||||||    
T  1824672 ttttttaataggggatcaaaaatacaacattttaaaacttagggggc-aaaaatacagtttagcc 1824609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 1859214 - 1859054
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  ||||||||  || ||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||     
T  1859214 caactttttgagaagataagaagttaaaagatcatattttccttatgttagg-ggtcaaaagagcatatttccctaaacat--ggggtcacttttgccat 1859118  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          ||||||||  ||||| | ||||||||| |||| |||||||| ||||||  |||||||||    
T  1859117 ttttttaataggggatcaaaaatacaacattttaaaacttagggggc-aaaaatacagtttagcc 1859054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 3208132 - 3208050
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||    
T  3208132 aagataaggggtcaaaatatcatatttcccttatgttagg-ggtcaaaagaacatatttccctaaacatagaggttcacttttg 3208050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 23565232 - 23565121
Alignment:
Q  53 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnn-aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||        ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  23565232 ggtcaaaa-agcatatttccataaacataggggatcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacataaggggcgaaaa 23565134  T
Q  152 atgtagtttagcc 164  Q
     | ||||||||||    
T  23565133 gtctagtttagcc 23565121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 5192330 - 5192272
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  5192330 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcc 5192272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 4807658 - 4807595
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataa 169  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||    
T  4807658 aatagggggccaaaattgcaacattttgaaacataggaggcgaaaagtgcagtttagcctataa 4807595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7117254 - 7117350
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||| |||||  || ||| ||||| ||||||  ||||||||||||||||||| ||||||||  ||||||||||||||||    
T  7117254 caactttttgtaaagataaggggttaaaagaacacattccccttctgttagtgggtcaaaagagcatatttctctaaacat--ggggtcacttttgcca 7117350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 18253026 - 18253168
Alignment:
Q  1 caactttttgtaaagataaggggtc-aaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  ||||||||||||| |||| ||||||||||||||||||| | |||||||| | |||||||||||||||||  |||||||||||| |||     
T  18253026 caactttttgagaagataaggggtcaaaaaatcatatttcccttatgttatg-ggtcaaaaaaacatatttccctaaacat--ggggtcacttttaccat 18253122  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacataggggg 145  Q
          ||||||||  || ||| ||||||||||||||  |||||||    
T  18253123 ttttttaataggggatcagaatagcaacattttgaaatttaggggg 18253168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 23565335 - 23565393
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  23565335 aatagggggtcaaaattgcaacattttaaaacatagggggcgaaaagtctagtttagcc 23565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 33895619 - 33895686
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaattt 173  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||| || ||||||||| | ||||||    
T  33895619 aataggggaccaaaattgcaacattttaaaatatagggggcgaaaagtgcagtttagcctaaaaattt 33895686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 19391445 - 19391388
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||| |||||||||||||||||||||||||| |||||||||| || |||||||||    
T  19391445 aataggggaccaaaattgcaacattttgaaacata-ggggcgaaaagtgcagtttagcc 19391388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 19392812 - 19392870
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||    
T  19392812 aatagggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 19392870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 21929905 - 21929847
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||    
T  21929905 aatagggagccaaaatcgcaacgttttgaaacatagggggcgaaaaatgcactttagcc 21929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31268442 - 31268347
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc 97  Q
    ||||||||| ||||||||| ||||| ||||  |||||| ||||||||||| | || ||||||||||||||||||||||||  ||| ||||||||||||    
T  31268442 caactttttataaagataaagggtctaaagagcatatt-cccttatgttatgggg-caaaagagcatatttccctaaacacggggagtcacttttgcc 31268347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 12723319 - 12723264
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||| || ||||||    
T  12723319 aatagggggtcaaaattgcaacgttttgaaacatagggggtgaaaagtgcagttta 12723264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 22452231 - 22452176
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||| || ||||||    
T  22452231 aatagggggctaaaattgcaacattttaaaatatagggggcgaaaagtgcagttta 22452176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 30784323 - 30784268
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
    |||||||| ||||||||||||||||||||||| |||||||| |||| || ||||||    
T  30784323 aataggggaccaaaattgcaacattttgaaacctagggggcaaaaagtgaagttta 30784268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 19924511 - 19924569
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||| ||||||||||||| |||||||| ||||||||||| |||||| || |||||||||    
T  19924511 aataaggggccaaaattgtaacattttaaaacataggggacgaaaagtgcagtttagcc 19924569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 44147216 - 44147274
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||| || | |||||||    
T  44147216 aatagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagcc 44147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41688250 - 41688330
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaa-gtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 80  Q
    ||||||||||  |||||||||||||||||  ||| ||||  ||||||||| | |||||||||| |||||||| ||||||||    
T  41688250 caactttttgagaagataaggggtcaaaatatcagatttttcttatgttaaggggtcaaaagaacatatttctctaaacat 41688330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 3819541 - 3819487
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||||||||||||||||||||| || |||| |||||||| | |||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaagggg-gaaaaatgcactttagccaa 3819487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23565253 - 23565214
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcc 40  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  23565253 caactttttgtaaagataaggggtcaaaaagcatatttcc 23565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 35795273 - 35795230
Alignment:
Q  108 tagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||    
T  35795273 tagggggtcaaaattgcaactttttgaaacatagggggccaaaa 35795230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 4518927 - 4518869
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||| ||||| ||| |||||||||||||| || | |||||||    
T  4518927 aatagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagcc 4518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 8802458 - 8802400
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| |||||||||| ||||||| ||| |||||| || | |||||||    
T  8802458 aatagggggccaaaatcgcaacattttaaaacatacgggacgaaaagtgcactttagcc 8802400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 17648496 - 17648546
Alignment:
Q  114 gccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||| ||||||||||||||| |||||||||||||| || || ||||||    
T  17648496 gccaaaactgcaacattttgaaagatagggggcgaaaagtgcagattagcc 17648546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 34602069 - 34602027
Alignment:
Q  109 agggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||    
T  34602069 agggggccaaaatcgcaactttttgaaacatagggggtgaaaa 34602027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 34602435 - 34602477
Alignment:
Q  109 agggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    ||||||||||||||||||| |||||||||||||| || |||||    
T  34602435 agggggccaaaattgcaactttttgaaacataggaggtgaaaa 34602477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41385630 - 41385700
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatattt 70  Q
    ||||||||||  | |||||||||||||||  ||||||||||||||||||||   |||||||||| ||||||    
T  41385630 caactttttgagatgataaggggtcaaaaaatcatatttcccttatgttagagagtcaaaagagtatattt 41385700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 18252461 - 18252401
Alignment:
Q  106 aatagggggccaaaattgcaacattttg--aaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||| |||||| ||||||||||   |||| ||||||||||||||||| ||||||||    
T  18252461 aatagggggtcaaaatagcaacatttttttaaacttagggggcgaaaaatgttgtttagcc 18252401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 27453181 - 27453136
Alignment:
Q  109 agggggccaaaattgcaacattttgaaacatagggggcgaaaaatg 154  Q
    ||||||||||| | ||||| ||||||||||||||||| ||||||||    
T  27453181 agggggccaaattcgcaactttttgaaacatagggggtgaaaaatg 27453136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 45163718 - 45163763
Alignment:
Q  108 tagggggccaaaattgcaacattttgaaacatagggggcgaaaaat 153  Q
    |||||||||||||| ||||| | |||||||||||||||| ||||||    
T  45163718 tagggggccaaaatcgcaacttcttgaaacatagggggccaaaaat 45163763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 15869499 - 15869557
Alignment:
Q  22 ggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata 81  Q
    ||||||||| ||||||||| |||| ||||| |||||||||||||||||||| |||||||||    
T  15869499 ggtcaaaagatcatatttctctta-gttag-aggtcaaaagagcatatttctctaaacata 15869557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 5789 - 5953
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  5789 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 5888  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| |||| |||||||||| ||| || |||||| || |||||||||    
T  5889 tttttaaatagggggccaaaatcgcaatattttgaaacttagaggccgaaaagtgaagtttagcc 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 5708 - 5650
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  5708 aataggaggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcc 5650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 61978 - 61814
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||      
T  61978 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 61879  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||||||||||| ||||||||||||||| |||  |||||||| || |||||||||    
T  61878 ttttttaatagggggccaaaatcgcaacattttgaaacttagaaggcgaaaagtgaagtttagcc 61814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19446 - 19283
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||      
T  19446 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagg-ggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 19349  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
         ||||||||| |||||| ||||||||||||||| |||| |||||||| |  |||||||||||    
T  19348 tttttaatagggggtcaaaatcgcaacattttgaaacttaggaggcgaaaagtagagtttagccaa 19283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 62064 - 62122
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  62064 aatacggggccaaaattgcaacattttgaaacatagggggtgaaaaatgcagtttagcc 62122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 19527 - 19585
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| | |||| |||||||| || ||||||||||||| |||||||||    
T  19527 aatagggggccaaaatcgaaacagtttgaaacttaaggggcgaaaaatgcagtttagcc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 3100 - 3266
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      
T  3100 caactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgccatt 3199  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||||| |||||||||||||||||||||| ||| ||||||||| ||  ||||||||||    
T  3200 ttttttaatagggggtcaaaattgcaacattttgaaacttagagggcgaaaagtgaggtttagccaa 3266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 3019 - 2959
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| || | |||||||||    
T  3019 aatagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaa 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2189 - 2357
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccann 100  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  2189 caactttttgtaaagataaggggtcaaaaagcatattgcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 2288  T
Q  101 nnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaataaa 170  Q
         |||||||||||||||| ||||| |||| |||| |||  |||||||| || | ||||||| |||||    
T  2289 tttttaatagggggccaaaatcgcaac-ttttaaaacttagaaggcgaaaagtggactttagcctataaa 2357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 2106 - 2048
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  2106 aatagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 142087 - 142247
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  142087 caactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatt 142185  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
          |||||||| |||||||||||||||||| |||| ||| ||||||||| || ||||||    
T  142186 ttttttaataggggaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagttta 142247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 141996 - 141943
Alignment:
Q  113 ggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||||||||||| | ||||||||||| |||||| || |||||||||||    
T  141996 ggccaaaattgcaacattataaaacataggggacgaaaagtgcagtttagccaa 141943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 84; Significance: 6e-40; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 49823 - 49659
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||      
T  49823 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccatt 49724  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||| ||||||| |||||||||| |||| || |||||||||| || | |||||||    
T  49723 ttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 49659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 62362 - 62198
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||      
T  62362 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccatt 62263  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||||||| ||||||| |||||||||| |||| || |||||||||| || | |||||||    
T  62262 ttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 62198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 49904 - 49962
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||| || | |||||||    
T  49904 aataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 49962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 62443 - 62501
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||  |||||| |||||||| |||||||||||||||||||| || | |||||||    
T  62443 aataggggatcaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 62501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1914 - 2011
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  1914 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcacttttgcca 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 25104 - 25268
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    ||||||||  |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||      
T  25104 caacttttgttaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttaccatt 25203  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||| ||||||||||| ||||||||||  ||| ||| || ||||||||| |||||||||    
T  25204 ttttttaataaggggccaaaatcgcaacattttagaacttagaggacgaaaaatgaagtttagcc 25268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 3709 - 3803
Alignment:
Q  2 aactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 98  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  3709 aactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 3803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 5413 - 5290
Alignment:
Q  41 cttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccannnnnnnaatagggggccaaaattgcaacattttgaaacata 140  Q
    |||| |||||||||||||||||||||||||  ||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  5413 cttacgttaggaggtcaaaagagcatatttttctaaacataaggggtcacttttgccatttttttaatagggggccaaaattgcaacattttgaaacata 5314  T
Q  141 gggggcgaaaaatgtagtttagcc 164  Q
      |||||| || ||||||||||||    
T  5313 aagggcgagaagtgtagtttagcc 5290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 5178 - 5120
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5178 aataggggaccaaaattgcaacattttgaaacatagggggcgaaaaatgtaatttagcc 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 66338 - 66254
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggg 85  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  66338 caactttttgtaaagataaggggtcaaaaagcatagttcccttatgttaggaggtcaaaatagcatatttccctaaacatagggg 66254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 66424 - 66477
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||||    
T  66424 ggggccaaaattacaacattttgaaacatagggggcgaaaagtgcagtttagcc 66477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 66242 - 66183
Alignment:
Q  106 aatagggggccaaaa-ttgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||||||||||||| |||||||||||| |||| ||| ||||||||| || |||||||||    
T  66242 aatagggggccaaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 66183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 2155 - 1995
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-n 99  Q
    |||||||||||||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||      
T  2155 caactttttgtaaagatatggggtcaaaaagcatgtttcccttatgttaggaggtcaaaagagcatatttccctaa------ggggtcacttttgccatt 2062  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
          ||||||||| |||||| |||||||||| |||| ||| ||||||||| |  |||||||||||    
T  2061 ttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtaaagtttagccaa 1995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 2236 - 2294
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||| || |||||||||    
T  2236 aatagagggccaaaattgcaacattttaaaacatggggggcgaaaagtgcagtttagcc 2294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 896 - 1059
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagt-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca- 98  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||| ||||||| |||||||||||  ||||||||||||||||     
T  896 caactttttgtaaagataaggggtcaaaagagcatatttaccttatgttagaaggtcaaaatagcatatatccctaaacat-tggggtcacttttgccat 994  T
Q  99 nnnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
           ||||||||  ||||||||||||||| | |||| || |||||||||| ||| ||||||||    
T  995 tttttttaataggggatcaaaattgcaacattataaaactta-ggggcgaaaagtgttgtttagcc 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 814 - 756
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
    |||||||||||||||| ||||||||| ||||| || |||| ||||| || |||||||||    
T  814 aatagggggccaaaatcgcaacatttcgaaacttaaggggtgaaaagtgcagtttagcc 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5996 - 5911
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatgtta-ggaggtcaaaagagcatatttccctaaacatagggg 85  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  5996 caactttttataaagataaggggtcaaaaagcatatttcccttatgttaggggggtcaaaatagcatatttccctaaacatagggg 5911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 6076 - 6121
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaa 151  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||    
T  6076 aatagggggccaaaatcgcaacatttaaaaacatagggggcgaaaa 6121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 29880 - 29719
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||  ||||||||||||  ||     
T  29880 caactttttgagaagataaggggtcaaaagatcatatttcccttatgttagg-ggtccaaagagcatatttccccaaacat--ggggtcacttttttcat 29784  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagcc 164  Q
          |||| ||| ||||||   |||||||||||||| |||||||| |||| || |||||||||    
T  29783 ttttttaataagggtccaaaaactcaacattttgaaacttagggggcaaaaagtgcagtttagcc 29719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 29938 - 29993
Alignment:
Q  111 ggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    |||||||||||||||||||||| |||| || ||| | |||| ||||||||||||||    
T  29938 ggggccaaaattgcaacattttaaaacttaagggacaaaaagtgtagtttagccaa 29993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 455083 - 455000
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    |||||||||||||||||| || ||||||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  455083 aagataaggggtcaaaagatcgtatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggtcacttttg 455000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 455179 - 455102
Alignment:
Q  13 aagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtca 89  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||||| ||||||||| ||||||||    
T  455179 aagataaggggtcaaaagatcatatttcccttatgttagggggttaaaagaacatattttcctaaacatggggggtca 455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 455274 - 455331
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    |||||||||||||||| ||||||||||||||| |||||  |||||| || ||||||||    
T  455274 aatagggggccaaaatcgcaacattttgaaacttagggttcgaaaagtgcagtttagc 455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 43964 - 44106
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccan 99  Q
    ||||||||||  |||||||  ||||||||| |||||||||||||  |||||| |||||||| ||||||||| ||||||||| ||||  |||||||||||     
T  43964 caactttttgagaagataaaaggtcaaaagatcatatttccctttcgttagg-ggtcaaaaaagcatattttcctaaacatggggg--cacttttgccat 44060  T
Q  100 nnnnnnaatagggggccaaaattgcaacattttgaaacataggggg 145  Q
          ||||||||||||||||| |||||||||||||| |||||||    
T  44061 ttttttaatagggggccaaaattacaacattttgaaacttaggggg 44106  T

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Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 43882 - 43827
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagttta 161  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||| || ||||||    
T  43882 aatagggggccaaaattgaaacattttgaaacttaggaggcgaaaagtgcagttta 43827  T

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Target: scaffold0014 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 112291 - 112214
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    ||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  112291 caactttttgagaagataaggagtcaaaagatcatatttcccttatgttaggaggtcaaaaaggcatatttccctaaa 112214  T

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Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 112380 - 112429
Alignment:
Q  114 gccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagc 163  Q
    ||||||||||||||||||| |||| | |||| |||||| |||||||||||    
T  112380 gccaaaattgcaacattttaaaactttggggacgaaaagtgtagtttagc 112429  T

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Target: scaffold0291 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10085 - 9992
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaag-tcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg 95  Q
    ||||||||||  ||||||||||||| |||| |||||||| |||||||||| | |||||||||||||||||||||||||||| | ||||||||||||    
T  10085 caactttttgagaagataaggggtctaaagatcatattttccttatgttatg-ggtcaaaagagcatatttccctaaacat-gagggtcacttttg 9992  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 250658 - 250703
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaagtcatatttcccttatg 46  Q
    |||||||||||||||||||||||||||||  |||||||||||||||    
T  250658 caactttttgtaaagataaggggtcaaaaaacatatttcccttatg 250703  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 250576 - 250516
Alignment:
Q  106 aatagggggccaaaattgcaacattttgaaacatagggggcgaaaaatgtagtttagccaa 166  Q
    ||||||||| |||| | |||||||||| |||||||||||||||||| || | |||||||||    
T  250576 aatagggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 250516  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3068 - 3144
Alignment:
Q  1 caactttttgtaaagataaggggtcaaaa-gtcatatttcccttatgttaggaggtcaaaagagcatatttccctaaa 77  Q
    |||||||||||||| ||||||||||||||   ||||||| |||||||||||| || ||||| | ||||||| ||||||    
T  3068 caactttttgtaaaaataaggggtcaaaatagcatatttaccttatgttagg-ggacaaaaaaacatattttcctaaa 3144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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