View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3103-INSERTION-13 (Length: 323)
Name: NF3103-INSERTION-13
Description: NF3103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3103-INSERTION-13 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 8 - 323
Target Start/End: Complemental strand, 53478047 - 53477732
Alignment:
| Q |
8 |
ggatttgactactatattagcagtaatgattaattgcatctttcttaaaagtgtaaaatattgcagcctgaacgttatattagtactagtaataaacaaa |
107 |
Q |
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| T |
53478047 |
ggatttgactactatattagcagtaatgattaattgcatctttcttaaaagtgtaaaatattgcaacctgaacgttatattagtactagtaataaacaaa |
53477948 |
T |
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| Q |
108 |
tcatggaaaacagtagcatgcaaatgagtgagatcatgaaaatattattaatattaattggatcattttacctgtgtgagtaatccagtacccgtgtgac |
207 |
Q |
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| T |
53477947 |
tcatggaaaacagtagcatgcaaatgagtgagatcatgaaaatattattaatattaattggaacattttacctgtgtgagtaatccagtacccgtgtgac |
53477848 |
T |
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| Q |
208 |
tcaaaacataatccctatgattattagccaataaattagcaagtgtttgattttcaagcttttctctttcagccacatgcaattgctccaacctctcttt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53477847 |
tcaaaacataatccctatgattattagccaataaattagcaagtgtttgattttcaagcttttctctttcagccacatgcaattgctccaacctctcttt |
53477748 |
T |
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| Q |
308 |
actaaaaggataagct |
323 |
Q |
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|||||||||||||||| |
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| T |
53477747 |
actaaaaggataagct |
53477732 |
T |
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