View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3103-INSERTION-2 (Length: 244)
Name: NF3103-INSERTION-2
Description: NF3103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3103-INSERTION-2 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 5636846 - 5636610
Alignment:
| Q |
8 |
gaagattgaatgttttatattttaagctcgataaagtattgtatgatcttcctccaacgattctgacttacagactgctacatgctttcgcaaagcgaga |
107 |
Q |
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| T |
5636846 |
gaagattgaatgttttatattttaagctcgataaagtattgtatgatcttcctccaacgattctgacttacagactgctacatgctttcgcaaagcgaga |
5636747 |
T |
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| Q |
108 |
ttgacttattttattaactaccacacatgaatcaaattctcccctataagggcagggcaaggtctacactatactagtacacccaatgcatgtttggatc |
207 |
Q |
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| T |
5636746 |
ttgacttattttattaactaccacacatgaatcaaattctcccctataagggcagggcaaggtctacactatactagtacaaccaatgcatgtttggatc |
5636647 |
T |
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| Q |
208 |
aacggtgagtttgaaaaaatcatgatggcaccgtgat |
244 |
Q |
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| T |
5636646 |
aacggtgagtttgaaaaaatcatgatggcacagtgat |
5636610 |
T |
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