View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3103_high_43 (Length: 300)
Name: NF3103_high_43
Description: NF3103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3103_high_43 |
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Alignment Details
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 18 - 289
Target Start/End: Original strand, 36676891 - 36677162
Alignment:
| Q |
18 |
ataacaatcaatcaattttatttctatccttcgagggaaagtggaagatgatgatgaataaaatgttaagtatttttgggcttataaaggccttgttcaa |
117 |
Q |
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| T |
36676891 |
ataacaatcaatcaattttatttctatccttcgagggaaagtggaagatgatgatgaataaaatgttaagtatttttgggcttataaaggccttgttcaa |
36676990 |
T |
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| Q |
118 |
ggatacaacaatggacagtgatttttgcacgtgaaattccattaaatgtatatagatcattaactttacacggttaattgaatgatggttgttagataaa |
217 |
Q |
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| T |
36676991 |
ggatataacaatggacagtgatttttgcacgtgaaattccattaaatgtatatagatcattaactttacacggttaattgaatgatggttgttagataaa |
36677090 |
T |
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| Q |
218 |
atcaaagcaattttagtcaatatcactctattattttattttagcatatgcggtcctttgagtttgattcat |
289 |
Q |
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| T |
36677091 |
atcaaagcaattttagtcaatatcactctattattttattttagcatatgcggtcctttaagtttgattcat |
36677162 |
T |
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