View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3103_high_47 (Length: 251)
Name: NF3103_high_47
Description: NF3103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3103_high_47 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 10049930 - 10050170
Alignment:
| Q |
1 |
attctatataaatgtaatttcttcttttttattgcttagctatgatgcgaattcgcgatatagatacctaaaatttatccaaccattgactgattcattc |
100 |
Q |
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| T |
10049930 |
attctatataaatgtaatttcttgttttttattgcttagctatgatgcaaattcgcgatttagatacctagaatttatccaaccattgactgattcattc |
10050029 |
T |
|
| Q |
101 |
ttatacaatgtatatttcacatattgtgttacatgcattatgtgcagctttagcactagtagacttgtaaagtttttgatgttgcaactattttataata |
200 |
Q |
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||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
10050030 |
ttatacaatatatatttcacataatgtgttacatgcattatgtgcagctttagcactagtagacttgtaaagtttttgatgttgtaactattttataata |
10050129 |
T |
|
| Q |
201 |
tgttctatcagattggatgcgcattggtgctttttcctttg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
10050130 |
tgttctatcagattggatgcgcattggtgctttttcctttg |
10050170 |
T |
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