View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3103_high_49 (Length: 250)
Name: NF3103_high_49
Description: NF3103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3103_high_49 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 26909340 - 26909105
Alignment:
| Q |
4 |
ttgagtcgaatagatagtaagatgaacaatatgtttatatgaagtgagggctaaaaaggaaattttatttgcttaacttgataggttgattttaacccag |
103 |
Q |
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| T |
26909340 |
ttgagtcgaatagatagtaagatgaacgatatgtttatatggaatgagggctaaaaaggaaattttatttgcttaacctgataggttgattttaacccag |
26909241 |
T |
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| Q |
104 |
cctaaatctaggatgcaaattacaaaagagtaaatatataggattaagaaaaggtataatttatcatatttcaccggtgcatcaaacaaaagattatagt |
203 |
Q |
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| T |
26909240 |
cctaaatctaggacgcaaattacaaaagagtaaatatataggattaaaaaaaggtataatttatcatatttcaccggtgtatcaaacaaaagattatagt |
26909141 |
T |
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| Q |
204 |
aggatatgatacaatcatcatatcttgtctccctat |
239 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
26909140 |
aggatatgatacaatcatcatatcttgtctccctat |
26909105 |
T |
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