View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3104R-Insertion-10 (Length: 126)
Name: NF3104R-Insertion-10
Description: NF3104R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3104R-Insertion-10 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 107; Significance: 4e-54; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 107; E-Value: 4e-54
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 38090520 - 38090402
Alignment:
| Q |
8 |
atcatcgatggtcattggtccaattatacatttttgcactccaatattggcaatcattgccctaattatgcataatcgagaaatttattttcagttcgaa |
107 |
Q |
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| T |
38090520 |
atcatcgatggtcattgctccaattatacatttttgcactccaatattgggaatcattgccctaattatgcataatcgacaaatttattttcagttcgaa |
38090421 |
T |
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| Q |
108 |
aatttctctcttgcttctc |
126 |
Q |
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| T |
38090420 |
aatttctctcttgcttctc |
38090402 |
T |
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