View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3104_high_14 (Length: 253)
Name: NF3104_high_14
Description: NF3104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3104_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 42150437 - 42150676
Alignment:
| Q |
1 |
gatatcagctcatggtgcacatatcacaaaaagaataagaagaataaataccagacatgttttctatggatttaactcttctaaagtgagaagttcattt |
100 |
Q |
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| T |
42150437 |
gatatcagctcatggtgcacatatcacaaaaagaataagaagaataaataccagacatgttttctatggatttaactcttctaaagtgagaagttcattt |
42150536 |
T |
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| Q |
101 |
gaagacatagagttaccaatttaaattgttgattgaatgggtgataatgtgataaaatacatatgcatttatagccaaaatcatgtagtaaaatctatca |
200 |
Q |
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| T |
42150537 |
gaagacatagagttaccaatttaaattgttgattgaatgggtgataatgtgataaaatacatatgcatttatagccaaaatcatgtagtaaaatctatca |
42150636 |
T |
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| Q |
201 |
tcctcaacatcaaagaaagaaaaaatctatcatcctcttc |
240 |
Q |
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| T |
42150637 |
tcctcaacatcaaagaaagaaaaaatctatcatcctcttc |
42150676 |
T |
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