View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3106_high_22 (Length: 237)

Name: NF3106_high_22
Description: NF3106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3106_high_22
NF3106_high_22
[»] chr4 (53 HSPs)
chr4 (78-191)||(34496991-34497104)
chr4 (93-205)||(34493457-34493577)
chr4 (108-192)||(34482157-34482241)
chr4 (1-54)||(23750192-23750245)
chr4 (1-55)||(12600426-12600480)
chr4 (1-54)||(6641353-6641406)
chr4 (1-54)||(10072601-10072654)
chr4 (1-54)||(15014775-15014828)
chr4 (1-54)||(19621449-19621502)
chr4 (1-54)||(29680935-29680988)
chr4 (1-54)||(45833053-45833106)
chr4 (1-49)||(3500043-3500091)
chr4 (1-49)||(11900864-11900912)
chr4 (2-54)||(19884370-19884422)
chr4 (2-54)||(37986001-37986053)
chr4 (1-48)||(8685831-8685878)
chr4 (1-54)||(8105306-8105359)
chr4 (1-54)||(14605294-14605347)
chr4 (1-54)||(19912268-19912321)
chr4 (1-54)||(54679596-54679649)
chr4 (1-49)||(29121038-29121086)
chr4 (1-43)||(55379971-55380013)
chr4 (1-54)||(2651482-2651534)
chr4 (1-54)||(11915370-11915423)
chr4 (1-54)||(14904746-14904799)
chr4 (1-54)||(16324904-16324957)
chr4 (1-54)||(16853172-16853225)
chr4 (1-54)||(17540068-17540121)
chr4 (1-54)||(23123189-23123242)
chr4 (1-46)||(56533450-56533495)
chr4 (1-49)||(3105809-3105857)
chr4 (1-49)||(13693472-13693520)
chr4 (1-49)||(16848221-16848269)
chr4 (2-54)||(22675913-22675965)
chr4 (102-134)||(34492441-34492473)
chr4 (1-49)||(36470493-36470541)
chr4 (1-49)||(41115158-41115206)
chr4 (1-49)||(55731519-55731567)
chr4 (1-48)||(10249537-10249584)
chr4 (1-54)||(3395258-3395311)
chr4 (1-54)||(10661555-10661608)
chr4 (1-54)||(10875700-10875753)
chr4 (1-54)||(12811565-12811618)
chr4 (1-49)||(14154383-14154432)
chr4 (1-54)||(17788427-17788480)
chr4 (5-54)||(18473699-18473748)
chr4 (1-54)||(18773727-18773780)
chr4 (1-46)||(38513555-38513600)
chr4 (1-54)||(56034239-56034292)
chr4 (1-49)||(6517159-6517207)
chr4 (1-49)||(16939703-16939751)
chr4 (1-54)||(19666035-19666092)
chr4 (90-122)||(34489116-34489148)
[»] chr5 (46 HSPs)
chr5 (1-48)||(21072650-21072697)
chr5 (1-54)||(89834-89887)
chr5 (1-54)||(6498908-6498961)
chr5 (1-54)||(12353209-12353262)
chr5 (1-54)||(19536710-19536763)
chr5 (1-54)||(22000469-22000522)
chr5 (1-49)||(11993565-11993613)
chr5 (1-54)||(13545938-13545991)
chr5 (1-54)||(13736548-13736601)
chr5 (1-54)||(14086953-14087006)
chr5 (1-54)||(17814636-17814689)
chr5 (1-54)||(21100116-21100169)
chr5 (1-54)||(21199414-21199467)
chr5 (1-54)||(23413387-23413440)
chr5 (1-54)||(26784025-26784078)
chr5 (1-54)||(31117549-31117602)
chr5 (1-54)||(33022336-33022389)
chr5 (1-49)||(6512843-6512891)
chr5 (1-49)||(25930569-25930617)
chr5 (1-49)||(26758825-26758873)
chr5 (1-49)||(28139282-28139330)
chr5 (1-55)||(25740780-25740834)
chr5 (1-47)||(42243359-42243405)
chr5 (1-46)||(643114-643159)
chr5 (1-54)||(7746107-7746160)
chr5 (1-54)||(20550564-20550617)
chr5 (1-54)||(20968883-20968936)
chr5 (1-54)||(25097240-25097293)
chr5 (1-54)||(25155210-25155263)
chr5 (1-54)||(31487906-31487959)
chr5 (1-49)||(9088644-9088692)
chr5 (1-49)||(15516645-15516693)
chr5 (1-49)||(29138819-29138867)
chr5 (1-49)||(30116250-30116298)
chr5 (1-49)||(33932943-33932991)
chr5 (16-54)||(9399044-9399082)
chr5 (1-43)||(23880747-23880789)
chr5 (1-54)||(2156688-2156741)
chr5 (1-54)||(16607183-16607236)
chr5 (1-54)||(26120239-26120292)
chr5 (1-54)||(34638126-34638179)
chr5 (1-49)||(3245855-3245903)
chr5 (1-49)||(4886698-4886746)
chr5 (1-49)||(21659887-21659935)
chr5 (1-49)||(28464752-28464799)
chr5 (1-49)||(30742657-30742705)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-54)||(142770-142823)
scaffold0007 (7-54)||(64044-64091)
[»] chr3 (73 HSPs)
chr3 (1-54)||(16659050-16659103)
chr3 (1-54)||(22804453-22804506)
chr3 (1-54)||(2560860-2560913)
chr3 (1-54)||(8874551-8874604)
chr3 (1-54)||(11223237-11223290)
chr3 (1-54)||(12396741-12396794)
chr3 (1-54)||(13948011-13948064)
chr3 (1-54)||(14969030-14969083)
chr3 (1-54)||(15902870-15902923)
chr3 (1-54)||(19249844-19249897)
chr3 (1-54)||(22128718-22128771)
chr3 (1-54)||(28581778-28581831)
chr3 (1-54)||(29951869-29951922)
chr3 (1-54)||(30001023-30001076)
chr3 (1-54)||(41494671-41494724)
chr3 (1-49)||(6090408-6090456)
chr3 (1-49)||(53057162-53057210)
chr3 (1-48)||(16199861-16199908)
chr3 (3-54)||(49643195-49643246)
chr3 (1-54)||(12726663-12726716)
chr3 (1-54)||(12963516-12963569)
chr3 (1-54)||(13781017-13781070)
chr3 (1-54)||(16879691-16879744)
chr3 (1-46)||(17239354-17239399)
chr3 (1-54)||(17668078-17668131)
chr3 (1-54)||(38178077-38178130)
chr3 (1-54)||(40799570-40799623)
chr3 (1-46)||(46350278-46350323)
chr3 (1-54)||(47207377-47207430)
chr3 (1-54)||(47405855-47405908)
chr3 (1-49)||(12967987-12968035)
chr3 (1-49)||(19889374-19889422)
chr3 (1-49)||(20645833-20645881)
chr3 (1-49)||(20724767-20724815)
chr3 (1-45)||(22140446-22140490)
chr3 (1-49)||(24775965-24776013)
chr3 (1-49)||(29855087-29855135)
chr3 (1-49)||(49666838-49666886)
chr3 (1-47)||(2784746-2784792)
chr3 (4-54)||(6175010-6175060)
chr3 (1-54)||(4243552-4243605)
chr3 (1-54)||(6253094-6253147)
chr3 (1-54)||(8729419-8729472)
chr3 (1-54)||(9081306-9081359)
chr3 (1-54)||(16305580-16305633)
chr3 (1-46)||(17697291-17697336)
chr3 (1-54)||(20627866-20627919)
chr3 (1-54)||(26418107-26418160)
chr3 (1-54)||(31303084-31303137)
chr3 (1-54)||(33582904-33582957)
chr3 (1-54)||(49553933-49553986)
chr3 (1-49)||(5213256-5213304)
chr3 (1-49)||(16881968-16882016)
chr3 (2-54)||(31303020-31303072)
chr3 (1-49)||(46796800-46796848)
chr3 (3-54)||(12389305-12389356)
chr3 (3-54)||(13823739-13823790)
chr3 (3-54)||(16032269-16032320)
chr3 (1-48)||(52283410-52283457)
chr3 (1-43)||(14393435-14393477)
chr3 (1-54)||(16811875-16811929)
chr3 (4-54)||(19198315-19198365)
chr3 (1-54)||(3238366-3238419)
chr3 (1-54)||(10851483-10851536)
chr3 (1-54)||(11867941-11867994)
chr3 (1-54)||(14007237-14007290)
chr3 (1-54)||(16811704-16811757)
chr3 (1-46)||(18122046-18122091)
chr3 (1-46)||(18143178-18143223)
chr3 (1-54)||(22766949-22767002)
chr3 (1-46)||(50299915-50299960)
chr3 (1-49)||(13699047-13699095)
chr3 (1-49)||(14955107-14955155)
[»] chr2 (51 HSPs)
chr2 (1-54)||(24376775-24376828)
chr2 (1-54)||(19540086-19540139)
chr2 (1-54)||(22455366-22455419)
chr2 (1-54)||(24779044-24779097)
chr2 (1-54)||(24851043-24851096)
chr2 (1-54)||(31801266-31801319)
chr2 (1-54)||(39038019-39038072)
chr2 (1-49)||(40782152-40782200)
chr2 (3-54)||(23234676-23234727)
chr2 (1-54)||(20152379-20152432)
chr2 (1-54)||(22317260-22317313)
chr2 (1-54)||(23184680-23184733)
chr2 (1-54)||(23595943-23595996)
chr2 (1-54)||(25189068-25189121)
chr2 (1-54)||(44880837-44880890)
chr2 (1-49)||(10010128-10010176)
chr2 (1-48)||(9015747-9015794)
chr2 (1-48)||(24575711-24575758)
chr2 (1-44)||(25828811-25828854)
chr2 (1-43)||(25037639-25037681)
chr2 (2-48)||(31328342-31328388)
chr2 (2-48)||(31335063-31335109)
chr2 (1-43)||(41122094-41122136)
chr2 (1-54)||(6574506-6574559)
chr2 (1-54)||(17963645-17963698)
chr2 (1-54)||(18431315-18431368)
chr2 (1-54)||(18702410-18702463)
chr2 (1-54)||(19114753-19114806)
chr2 (1-54)||(22188481-22188534)
chr2 (1-54)||(24157485-24157538)
chr2 (1-46)||(28701591-28701636)
chr2 (1-49)||(14581232-14581280)
chr2 (1-49)||(22271806-22271854)
chr2 (1-49)||(28140979-28141027)
chr2 (1-49)||(33073900-33073948)
chr2 (1-49)||(34322314-34322362)
chr2 (6-49)||(6392308-6392351)
chr2 (2-49)||(22802135-22802182)
chr2 (1-48)||(24843880-24843927)
chr2 (3-54)||(30557701-30557752)
chr2 (1-47)||(28712077-28712123)
chr2 (1-54)||(13964357-13964410)
chr2 (1-54)||(20569127-20569180)
chr2 (1-54)||(21537629-21537682)
chr2 (1-46)||(21845826-21845871)
chr2 (1-54)||(24441094-24441147)
chr2 (1-54)||(26619478-26619531)
chr2 (1-54)||(38781065-38781118)
chr2 (1-45)||(1587411-1587455)
chr2 (7-59)||(22525213-22525265)
chr2 (1-49)||(28551297-28551345)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-54)||(151-204)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-54)||(7501-7554)
[»] scaffold0330 (1 HSPs)
scaffold0330 (1-54)||(37-90)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-54)||(19006-19059)
[»] scaffold0217 (2 HSPs)
scaffold0217 (1-54)||(18704-18757)
scaffold0217 (1-49)||(22514-22562)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-54)||(10491-10544)
scaffold0161 (1-54)||(15155-15208)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-54)||(37117-37170)
scaffold0120 (1-54)||(41835-41888)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-54)||(49008-49061)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-54)||(26357-26410)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-54)||(84067-84120)
scaffold0009 (1-54)||(268456-268509)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-54)||(219914-219967)
scaffold0004 (1-49)||(211079-211127)
scaffold0004 (1-54)||(244664-244717)
scaffold0004 (1-45)||(377945-377989)
[»] chr8 (43 HSPs)
chr8 (1-54)||(17442251-17442304)
chr8 (1-54)||(18121539-18121592)
chr8 (1-54)||(18321589-18321642)
chr8 (1-54)||(39693201-39693254)
chr8 (1-54)||(43644563-43644616)
chr8 (1-54)||(45538868-45538921)
chr8 (1-49)||(14990493-14990541)
chr8 (1-46)||(17526163-17526208)
chr8 (1-54)||(18679481-18679534)
chr8 (1-54)||(18718670-18718723)
chr8 (1-54)||(19956768-19956821)
chr8 (1-54)||(20382824-20382877)
chr8 (1-54)||(23264056-23264109)
chr8 (1-49)||(14989882-14989930)
chr8 (1-49)||(18152078-18152126)
chr8 (1-49)||(25163743-25163791)
chr8 (3-54)||(19707175-19707226)
chr8 (1-43)||(16206973-16207015)
chr8 (1-54)||(12758194-12758247)
chr8 (1-54)||(18557689-18557742)
chr8 (1-54)||(19942901-19942954)
chr8 (1-54)||(20255941-20255994)
chr8 (1-54)||(24645998-24646051)
chr8 (1-49)||(6407397-6407445)
chr8 (1-49)||(17701413-17701461)
chr8 (1-49)||(18772365-18772413)
chr8 (1-49)||(22662788-22662836)
chr8 (1-49)||(25850433-25850481)
chr8 (1-49)||(40845818-40845866)
chr8 (2-49)||(17917250-17917297)
chr8 (3-54)||(30421866-30421917)
chr8 (4-54)||(16188650-16188700)
chr8 (2-40)||(16681734-16681772)
chr8 (1-54)||(9320236-9320289)
chr8 (1-46)||(15336519-15336564)
chr8 (1-46)||(15425584-15425629)
chr8 (1-46)||(15516888-15516933)
chr8 (1-54)||(17797087-17797140)
chr8 (1-46)||(29692988-29693033)
chr8 (1-49)||(22673500-22673548)
chr8 (1-49)||(36104868-36104916)
chr8 (1-49)||(43639453-43639501)
chr8 (1-49)||(45292506-45292554)
[»] chr7 (53 HSPs)
chr7 (1-54)||(2914044-2914097)
chr7 (1-54)||(13138331-13138384)
chr7 (1-54)||(13261048-13261101)
chr7 (1-54)||(16314973-16315026)
chr7 (1-49)||(13472941-13472989)
chr7 (1-49)||(19237470-19237518)
chr7 (1-54)||(2499707-2499760)
chr7 (1-54)||(5001258-5001311)
chr7 (1-54)||(10883606-10883659)
chr7 (1-54)||(11319076-11319129)
chr7 (1-46)||(14187368-14187413)
chr7 (1-54)||(15088219-15088272)
chr7 (1-54)||(16316990-16317043)
chr7 (1-54)||(19328448-19328501)
chr7 (1-54)||(21283808-21283861)
chr7 (1-54)||(23280395-23280448)
chr7 (1-54)||(28622793-28622846)
chr7 (1-54)||(29935779-29935832)
chr7 (1-54)||(41842706-41842759)
chr7 (1-54)||(41842859-41842912)
chr7 (1-49)||(12174774-12174822)
chr7 (1-49)||(14426222-14426270)
chr7 (1-49)||(16557024-16557072)
chr7 (1-49)||(16608590-16608638)
chr7 (1-48)||(16310340-16310387)
chr7 (1-43)||(13034272-13034314)
chr7 (1-46)||(11792587-11792632)
chr7 (1-54)||(13302531-13302584)
chr7 (1-54)||(13646061-13646114)
chr7 (1-54)||(13683267-13683320)
chr7 (1-54)||(15467586-15467639)
chr7 (1-54)||(18056684-18056737)
chr7 (1-54)||(21692001-21692054)
chr7 (1-46)||(28408716-28408761)
chr7 (1-54)||(30025575-30025628)
chr7 (1-54)||(33605355-33605408)
chr7 (1-54)||(35953120-35953173)
chr7 (1-54)||(39284998-39285051)
chr7 (1-49)||(331317-331365)
chr7 (1-49)||(4821150-4821198)
chr7 (1-49)||(13172789-13172837)
chr7 (1-49)||(15704923-15704971)
chr7 (1-47)||(33421425-33421471)
chr7 (1-54)||(7488338-7488391)
chr7 (1-46)||(9098668-9098713)
chr7 (1-46)||(9099474-9099519)
chr7 (1-54)||(16112319-16112372)
chr7 (1-54)||(16411664-16411717)
chr7 (1-46)||(30944760-30944805)
chr7 (1-54)||(44466733-44466786)
chr7 (1-49)||(1292705-1292753)
chr7 (1-49)||(8182605-8182653)
chr7 (6-54)||(18362007-18362055)
[»] chr6 (39 HSPs)
chr6 (1-54)||(20113119-20113172)
chr6 (1-54)||(21624763-21624816)
chr6 (1-54)||(24116504-24116557)
chr6 (1-49)||(19951994-19952042)
chr6 (1-54)||(7763328-7763381)
chr6 (1-54)||(12347764-12347817)
chr6 (1-54)||(12715843-12715896)
chr6 (1-54)||(15532048-15532101)
chr6 (1-54)||(16265573-16265626)
chr6 (1-54)||(19470341-19470394)
chr6 (1-54)||(20731127-20731180)
chr6 (1-54)||(22801813-22801866)
chr6 (1-46)||(29597756-29597801)
chr6 (1-54)||(29917690-29917743)
chr6 (1-49)||(19833453-19833501)
chr6 (1-54)||(9717516-9717569)
chr6 (1-54)||(17446076-17446129)
chr6 (1-54)||(21034663-21034716)
chr6 (1-54)||(23296400-23296453)
chr6 (1-54)||(32543938-32543991)
chr6 (1-49)||(16876583-16876631)
chr6 (1-49)||(17867272-17867320)
chr6 (1-49)||(17877055-17877103)
chr6 (1-49)||(21617923-21617971)
chr6 (6-45)||(17381259-17381298)
chr6 (1-54)||(14100859-14100913)
chr6 (1-46)||(16915107-16915153)
chr6 (1-54)||(7811687-7811740)
chr6 (1-54)||(13144680-13144733)
chr6 (12-49)||(15954375-15954412)
chr6 (1-54)||(19623656-19623708)
chr6 (1-54)||(19688453-19688506)
chr6 (1-54)||(19875509-19875562)
chr6 (1-54)||(23230863-23230916)
chr6 (1-54)||(25930151-25930204)
chr6 (1-49)||(10704957-10705005)
chr6 (1-49)||(12422941-12422989)
chr6 (1-49)||(17316946-17316994)
chr6 (1-49)||(17927470-17927518)
[»] chr1 (43 HSPs)
chr1 (1-54)||(1577539-1577592)
chr1 (1-54)||(19717196-19717249)
chr1 (1-54)||(21028468-21028521)
chr1 (1-54)||(22600545-22600598)
chr1 (1-54)||(32786293-32786346)
chr1 (1-54)||(35039839-35039892)
chr1 (1-49)||(10757103-10757151)
chr1 (1-49)||(12284103-12284151)
chr1 (1-49)||(33256703-33256751)
chr1 (1-49)||(33276875-33276923)
chr1 (1-54)||(1900017-1900070)
chr1 (1-54)||(2268203-2268256)
chr1 (1-54)||(12624907-12624960)
chr1 (1-54)||(23036860-23036913)
chr1 (1-54)||(38282237-38282290)
chr1 (1-49)||(2266766-2266814)
chr1 (1-49)||(19215291-19215339)
chr1 (1-49)||(21192218-21192266)
chr1 (2-54)||(29215468-29215520)
chr1 (3-54)||(16235664-16235715)
chr1 (1-47)||(22202088-22202134)
chr1 (1-54)||(2327790-2327843)
chr1 (1-46)||(2834368-2834413)
chr1 (1-54)||(7309492-7309545)
chr1 (1-54)||(16233484-16233537)
chr1 (1-54)||(20909083-20909136)
chr1 (1-54)||(26702482-26702535)
chr1 (1-46)||(30571878-30571923)
chr1 (1-49)||(18130364-18130412)
chr1 (3-55)||(18614589-18614641)
chr1 (1-49)||(44824115-44824163)
chr1 (1-49)||(48570584-48570632)
chr1 (1-49)||(48703881-48703929)
chr1 (1-54)||(9346448-9346501)
chr1 (1-46)||(10250667-10250712)
chr1 (1-54)||(22153530-22153583)
chr1 (1-54)||(23054043-23054096)
chr1 (1-54)||(30892768-30892821)
chr1 (1-49)||(14263784-14263832)
chr1 (6-54)||(21684422-21684470)
chr1 (1-49)||(21702492-21702540)
chr1 (1-49)||(25448919-25448967)
chr1 (4-56)||(31358996-31359048)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-49)||(13252-13300)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-48)||(13724-13771)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-54)||(2374-2427)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-54)||(9643-9696)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-54)||(9632-9684)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-54)||(27814-27867)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-46)||(14800-14845)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-54)||(2900-2953)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-54)||(19851-19904)
scaffold0035 (1-49)||(99590-99638)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-46)||(74265-74310)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-54)||(212031-212084)
[»] scaffold1359 (1 HSPs)
scaffold1359 (1-49)||(1039-1087)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-49)||(5686-5734)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1-49)||(5862-5910)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-49)||(7124-7172)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-49)||(5872-5920)
[»] scaffold0047 (1 HSPs)
scaffold0047 (5-49)||(9584-9628)
[»] scaffold0023 (1 HSPs)
scaffold0023 (2-54)||(103246-103298)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-49)||(90440-90488)
scaffold0003 (1-54)||(376-429)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-43)||(44302-44344)
[»] scaffold1747 (1 HSPs)
scaffold1747 (1-54)||(993-1046)
[»] scaffold1745 (1 HSPs)
scaffold1745 (1-54)||(365-418)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-54)||(2335-2388)
[»] scaffold0567 (1 HSPs)
scaffold0567 (1-54)||(9582-9635)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-54)||(6074-6127)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-54)||(21359-21412)
scaffold0116 (1-49)||(2357-2405)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-54)||(2209-2262)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-54)||(81072-81125)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-54)||(37075-37128)
scaffold0022 (1-54)||(135135-135188)
scaffold0022 (1-54)||(158785-158838)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-54)||(144582-144635)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-49)||(3113-3161)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-49)||(5310-5358)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-49)||(8835-8883)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-44)||(19758-19801)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-48)||(1340-1387)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-43)||(59703-59745)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-55)||(59233-59287)
scaffold0011 (1-49)||(65789-65837)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-46)||(2664-2709)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-54)||(2175-2228)
[»] scaffold0498 (1 HSPs)
scaffold0498 (1-54)||(656-709)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-54)||(36565-36618)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-54)||(4394-4447)
scaffold0040 (1-49)||(1901-1949)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-49)||(2985-3033)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-49)||(22342-22390)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-49)||(32169-32217)


Alignment Details
Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 34497104 - 34496991
Alignment:
Q  78 tatacctattttaatttataatttatggacattaattaatagcatacaagagatcatattgatgggaagattttgatgtgtttgaaatcagttgcttgtc 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34497104 tatacctattttaatttataatttatggacattaattaatagcatacaagagatcatattgatgggaagattttgatgtgtttgaaatcagttgcttgtc 34497005  T
Q  178 tcagttccaccaaa 191  Q
    ||| ||||| ||||    
T  34497004 tcaattccaacaaa 34496991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 34493577 - 34493457
Alignment:
Q  93 ttataatttatggacattaattaatagcatacaagagatcatattgatgggaagattttgatgtgtttgaaatcagt--------tgcttgtctcagttc 184  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||        |||||||||||||||    
T  34493577 ttataatatatggacattaattaataacatacaagagatcatattcatgggaagattttgatgtgtttgaaatcagttgctcacctgcttgtctcagttc 34493478  T
Q  185 caccaaacaaatttggacttt 205  Q
    |||||||||||||| ||||||    
T  34493477 caccaaacaaatttagacttt 34493457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 34482241 - 34482157
Alignment:
Q  108 attaattaatagcatacaagagatcatattgatgggaagattttgatgtgtttgaaatcagttgcttgtctcagttccaccaaac 192  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  34482241 attaattaatagcatacaagagataatattcaggggaagattttgatgtgtttgaaatcagctgcttgtctcagttccagcaaac 34482157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23750245 - 23750192
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23750245 agttcacttaaaatttcttatcaaagttcatatcttagaaattctagagtctta 23750192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12600480 - 12600426
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggcttag 55  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  12600480 agttcacttataatttcttatcaaagttcatatcttagaaattctagagacttag 12600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6641406 - 6641353
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  6641406 agttcacttaaaatttcttatcaaagttcatatcttagaaattttagagtctta 6641353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10072654 - 10072601
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  10072654 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 10072601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15014775 - 15014828
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  15014775 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 15014828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19621449 - 19621502
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19621449 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19621502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29680935 - 29680988
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  29680935 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 29680988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45833106 - 45833053
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  45833106 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 45833053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3500043 - 3500091
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  3500043 agttcacttaaaatttcttatcaaagctcatatcttagaaattctagag 3500091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11900912 - 11900864
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11900912 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 11900864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 19884422 - 19884370
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19884422 gttcacttagaatttcttatcaaatttcatatcttagaaattctagagtctta 19884370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 37986001 - 37986053
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  37986001 gttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 37986053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8685831 - 8685878
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  8685831 agttcacttagaatttcttatcaaagttcatatcttagaaattctaga 8685878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8105359 - 8105306
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  8105359 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 8105306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14605294 - 14605347
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  14605294 agttcacttaaaatttcttaccaagtttcatatcttagaaattctagagtctta 14605347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19912268 - 19912321
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||    
T  19912268 agttcacttagaattccttatcaaaattcatttcttagaaattctagagtctta 19912321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54679649 - 54679596
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||| ||||    
T  54679649 agttcacttagaatttcttatcaaagttcatatcttagaaattccagagtctta 54679596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29121086 - 29121038
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||    
T  29121086 agttcacttagaatttcttatcaactttcatatcttagaaattctagag 29121038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 55380013 - 55379971
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  55380013 agttcacttagaatttcttatcaaagttcatatcttagaaatt 55379971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2651534 - 2651482
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  2651534 agttcacttagaatttcttat-aaatttcatatcttagaaattctagagtctta 2651482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11915423 - 11915370
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  11915423 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 11915370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14904746 - 14904799
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  14904746 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 14904799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16324904 - 16324957
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  16324904 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 16324957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16853225 - 16853172
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  ||||||||||||||  |||||||||||||||||||||| ||||    
T  16853225 agttcacttggaatttcttatcaaagctcatatcttagaaattctagagtctta 16853172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17540121 - 17540068
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  17540121 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 17540068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23123242 - 23123189
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||| |  |||||||||||||||||||||| ||||    
T  23123242 agttcacttagaatttcttatcatatctcatatcttagaaattctagagtctta 23123189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 56533450 - 56533495
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||    
T  56533450 agttcacttaaaatttcgtatcaaagttcatatctttgaaattcta 56533495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3105809 - 3105857
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  |||||||||||||||| |||||    
T  3105809 agttcacttagaatttcttatcaaagctcatatcttagaaattatagag 3105857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13693520 - 13693472
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||| ||  |||||||||||||||||||||||    
T  13693520 agttcacttagaatttcttataaactttcatatcttagaaattctagag 13693472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16848269 - 16848221
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||  ||||||||||||||  ||||||||||||||||||||||    
T  16848269 agttcacttggaatttcttatcaaagctcatatcttagaaattctagag 16848221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 22675913 - 22675965
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||| |||||||||||||| || ||| |||||||||||||||| ||||    
T  22675913 gttcacttagaatttcttatcaaatttaataccttagaaattctagagtctta 22675965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 34492473 - 34492441
Alignment:
Q  102 atggacattaattaatagcatacaagagatcat 134  Q
    |||||||||||||||||||||||||||||||||    
T  34492473 atggacattaattaatagcatacaagagatcat 34492441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36470541 - 36470493
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  36470541 agttcacttagaatttcttaacaattttcatatcttagaaattctagag 36470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41115158 - 41115206
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  41115158 agttcacttataatttcttaacaactttcatatcttagaaattctagag 41115206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 55731567 - 55731519
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  55731567 agttctcttagaatttcttatcaaagctcatatcttagaaattctagag 55731519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10249584 - 10249537
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| |||||||||||||  ||||||| ||||||||||||||    
T  10249584 agttcacttagaatttcttatcaactttcatattttagaaattctaga 10249537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3395311 - 3395258
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||| ||||||||||||||||||| ||||    
T  3395311 agttcacttagaatttcttaacaactttcttatcttagaaattctagagtctta 3395258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10661555 - 10661608
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||| ||||||||||||||| ||||    
T  10661555 agttcacttataatttcttaacaactttcatatattagaaattctagagtctta 10661608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10875700 - 10875753
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||| ||||||||||||||| ||||    
T  10875700 agttcacttataatttcttaacaactttcatatattagaaattctagagtctta 10875753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12811565 - 12811618
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| || |||||||||||||| || |||||||||||||| ||||| ||||    
T  12811565 agttcacgtagaatttcttatcaaagtttatatcttagaaattttagagtctta 12811618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14154383 - 14154432
Alignment:
Q  1 agttcacttaaaatttcttatcaaaatt-catatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||| || |||||||||||||||||||||    
T  14154383 agttcacttagaatttcttaacaaactttcatatcttagaaattctagag 14154432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17788427 - 17788480
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| | |  ||||||||||||||||||||||| ||||    
T  17788427 agttcacttagaatttcttaaccactttcatatcttagaaattctagagtctta 17788480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 18473748 - 18473699
Alignment:
Q  5 cacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||| |||||||||| ||  ||||||||||||||||||||||| ||||    
T  18473748 cacttataatttcttataaactttcatatcttagaaattctagagtctta 18473699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18773780 - 18773727
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||  ||  ||||||||||||||||||||||| ||||    
T  18773780 agttcacttagaatttcttaagaactttcatatcttagaaattctagagtctta 18773727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38513600 - 38513555
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| || | |||||||||||||||    
T  38513600 agttcacttagaatttcttatcaaagtttacatcttagaaattcta 38513555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 56034292 - 56034239
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||| ||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  56034292 agttcatttagaatttcttaacaactttcatatcttagaaattctagagtctta 56034239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6517207 - 6517159
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||| ||||||||  ||||||||||| ||||||||||    
T  6517207 agttcacttagaatttattatcaaagctcatatcttaggaattctagag 6517159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16939751 - 16939703
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||  ||||||||||    
T  16939751 agttcacttagaatttcttatcaaagctcatatcttacgaattctagag 16939703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19666092 - 19666035
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattc----atatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |||    |||||||||||||||||||| ||||    
T  19666092 agttcacttataatttcttatcaaagttcatatatatcttagaaattctagagtctta 19666035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 34489148 - 34489116
Alignment:
Q  90 aatttataatttatggacattaattaatagcat 122  Q
    |||||||||| ||||||||||||||||||||||    
T  34489148 aatttataatatatggacattaattaatagcat 34489116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21072650 - 21072697
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21072650 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 21072697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 89834 - 89887
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  89834 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 89887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6498961 - 6498908
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  6498961 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 6498908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12353209 - 12353262
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  12353209 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 12353262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19536710 - 19536763
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19536710 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19536763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22000469 - 22000522
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  22000469 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 22000522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11993613 - 11993565
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  11993613 agttcacttaaaatttcttatcaaagctcatatcttagaaattctagag 11993565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13545938 - 13545991
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  13545938 agttcacttaaaatttcttatcaaccttcatatcttagaaattcttgagtctta 13545991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13736548 - 13736601
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  13736548 agttcacttagaatttcttatcaaagttcatatcttagaaattttagagtctta 13736601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14086953 - 14087006
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| ||||    
T  14086953 agttcacttagaatttcttatcaaagctcatatcttagaaattctagagtctta 14087006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17814689 - 17814636
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||    
T  17814689 agttcacttagaatttattatcaaagttcatatcttagaaattctagagtctta 17814636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21100116 - 21100169
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||| ||||    
T  21100116 agttcacttagaatttcttatcaaagttcatatcttagaaatcctagagtctta 21100169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21199414 - 21199467
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||| ||||    
T  21199414 agttcacttagaatttctaatcaaagttcatatcttagaaattctagagtctta 21199467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23413387 - 23413440
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||| ||||    
T  23413387 agttcacttagaatttcttatcacagttcatatcttagaaattctagagtctta 23413440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26784078 - 26784025
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||| ||||    
T  26784078 agttcacttagaatttcttatcaaagtccatatcttagaaattctagagtctta 26784025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31117602 - 31117549
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| ||||    
T  31117602 agttcacttagaatttcttatcaaagctcatatcttagaaattctagagtctta 31117549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33022389 - 33022336
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  33022389 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 33022336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6512843 - 6512891
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||||    
T  6512843 agttcacttagaaattcttatcaaagttcatatcttagaaattctagag 6512891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25930569 - 25930617
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  25930569 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 25930617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26758873 - 26758825
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  26758873 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 26758825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28139330 - 28139282
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  28139330 agttcacttagaatttcttatcaaaactcatatcttaggaattctagag 28139282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25740834 - 25740780
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggcttag 55  Q
    |||||||||| |||||||||||||  |||||||||||||||||| |||| |||||    
T  25740834 agttcacttagaatttcttatcaactttcatatcttagaaattccagagtcttag 25740780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42243405 - 42243359
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctag 47  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  42243405 agttcacttagaatttcttatcaaagctcatatcttagaaattctag 42243359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 643114 - 643159
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||    
T  643114 agttcacttagaattttttatcaaagttcatatcttagaaattcta 643159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7746107 - 7746160
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  7746107 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 7746160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20550617 - 20550564
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||| ||||||||||||||||||| ||||    
T  20550617 agttcacttagaatttcttatcaactttcgtatcttagaaattctagagtctta 20550564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20968936 - 20968883
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  20968936 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 20968883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25097240 - 25097293
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |  |||||||||||||||||||| ||||    
T  25097240 agttcacttagaatttcttatcaaagtggatatcttagaaattctagagtctta 25097293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25155210 - 25155263
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |  |||||||||||||||||||| ||||    
T  25155210 agttcacttagaatttcttatcaaagtggatatcttagaaattctagagtctta 25155263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31487959 - 31487906
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| || |||||||||| ||| ||||||||||||||||||||||| ||||    
T  31487959 agttcacatacaatttcttattaaagttcatatcttagaaattctagagtctta 31487906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9088692 - 9088644
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| | ||||||||||||  ||||||||||||||||||||||    
T  9088692 agttcacttagagtttcttatcaaagctcatatcttagaaattctagag 9088644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15516693 - 15516645
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  15516693 agttcacttagaatttcttatcaaagcttatatcttagaaattctagag 15516645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29138819 - 29138867
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  29138819 agttcacttagaatttcttatcaaagctcatatcttaggaattctagag 29138867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30116250 - 30116298
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  30116250 agttcacttagaatttctcatcaaagctcatatcttagaaattctagag 30116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33932991 - 33932943
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  33932991 agttctcttagaatttcttatcaaagctcatatcttagaaattctagag 33932943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 9399044 - 9399082
Alignment:
Q  16 tcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  9399044 tcttatcaaagttcatatcttagaaattctagagtctta 9399082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23880789 - 23880747
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| |||||||||||||| |||| ||||||||||||    
T  23880789 agttcacttagaatttcttatcaaagttcacatcttagaaatt 23880747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2156688 - 2156741
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||| ||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  2156688 agttcatttagaatttcttaacaactttcatatcttagaaattctagagtctta 2156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16607236 - 16607183
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||| ||||| |||  ||||||||||||||||||||||| ||||    
T  16607236 agttcacttagaatatcttaacaactttcatatcttagaaattctagagtctta 16607183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26120239 - 26120292
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||  ||  ||||||||||||||||||||||| ||||    
T  26120239 agttcacttagaatttcttaataactttcatatcttagaaattctagagcctta 26120292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34638179 - 34638126
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||| ||||| ||||    
T  34638179 agttcacttagaatttcttaacaactttcatatcttagaaattgtagagtctta 34638126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3245855 - 3245903
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||| ||||||||||    
T  3245855 agttcacttataatttcttatcaaatcttatatcttaggaattctagag 3245903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4886746 - 4886698
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| |||||||||||||   ||||||||||||||||||||||    
T  4886746 agttctcttagaatttcttatcaacgctcatatcttagaaattctagag 4886698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21659935 - 21659887
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||| ||||||||||    
T  21659935 agttcacttagaatttcttatcaaagcttatatcttaggaattctagag 21659887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28464752 - 28464799
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||| |||||||||  ||||||||||||||||||||||    
T  28464752 agttcacttagaatt-cttatcaaagctcatatcttagaaattctagag 28464799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30742705 - 30742657
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||||||||  |||||||||| |||||||||||    
T  30742705 agttctcttagaatttcttatcaaagctcatatcttataaattctagag 30742657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 142823 - 142770
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  142823 agttcacttagaatttcttatcaaaattcatatcttagaaattctagagtctta 142770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 64091 - 64044
Alignment:
Q  7 cttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  64091 cttagaatttcttatcaaagttcatatcttagaaattctagagtctta 64044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16659050 - 16659103
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  16659050 agttcacttaaaatttcttatcaaagttcatatcttagaaattctagagtctta 16659103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22804453 - 22804506
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  22804453 agttcacttagaatttcttatcaaaattcatatcttagaaattctagagtctta 22804506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2560913 - 2560860
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  2560913 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 2560860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8874551 - 8874604
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  8874551 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 8874604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11223290 - 11223237
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  11223290 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 11223237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12396794 - 12396741
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  12396794 agttcacttataatttcttatcaaatttcatatcttagaaattctagagtctta 12396741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13948064 - 13948011
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  13948064 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 13948011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14969083 - 14969030
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  14969083 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 14969030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15902923 - 15902870
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  15902923 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 15902870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19249844 - 19249897
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19249844 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19249897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22128771 - 22128718
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  22128771 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 22128718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28581831 - 28581778
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  28581831 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 28581778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29951869 - 29951922
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  29951869 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 29951922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30001023 - 30001076
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  30001023 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 30001076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41494724 - 41494671
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  41494724 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 41494671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6090456 - 6090408
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  6090456 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 6090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 53057162 - 53057210
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  53057162 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 53057210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16199861 - 16199908
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  16199861 agttcacttagaatttcttatcaaagttcatatcttagaaattctaga 16199908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 49643195 - 49643246
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  49643195 ttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 49643246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12726663 - 12726716
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  12726663 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 12726716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12963516 - 12963569
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| ||||    
T  12963516 agttcacttagaatttcttatcaaagctcatatcttagaaattctagagtctta 12963569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13781017 - 13781070
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||| ||||    
T  13781017 agttcacttagaatttcttatcaaagttcatatcttagaaattcgagagtctta 13781070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16879744 - 16879691
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  16879744 agttcacttagaatttcttaacaactttcatatcttagaaattctagaggctta 16879691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17239354 - 17239399
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  17239354 agttcacttataatttcttatcaaagttcatatcttagaaattcta 17239399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17668131 - 17668078
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||    
T  17668131 agttcacttagaatttcttatcaaagttcatatcttagaaattcttgagtctta 17668078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38178077 - 38178130
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  38178077 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 38178130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40799623 - 40799570
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  40799623 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 40799570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46350278 - 46350323
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  46350278 agttcacttagaatttcttatcaaagttcatatcttagaaattcta 46350323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47207430 - 47207377
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  47207430 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 47207377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47405855 - 47405908
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  47405855 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 47405908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12968035 - 12967987
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  12968035 agttcacttagaatttcttaacaaatttcatatcttagaaattctagag 12967987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19889374 - 19889422
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  19889374 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 19889422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20645881 - 20645833
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  20645881 agttcacttagaatttcttattaaagttcatatcttagaaattctagag 20645833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20724815 - 20724767
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||||    
T  20724815 agttcacttagaatttcttatcaaagtttatatcttagaaattctagag 20724767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22140490 - 22140446
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattct 45  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  22140490 agttcacttagaatttcttatcaaagttcatatcttagaaattct 22140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24775965 - 24776013
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||||    
T  24775965 agttcacttagaatttcttatcaaaacttatatcttagaaattctagag 24776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29855135 - 29855087
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||    
T  29855135 agttcacttagaatttcttatcaactttcatatcttagaaattctagag 29855087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49666838 - 49666886
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  49666838 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 49666886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2784792 - 2784746
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctag 47  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  2784792 agttcacttataatttcttatcaaagctcatatcttagaaattctag 2784746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 6175060 - 6175010
Alignment:
Q  4 tcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  6175060 tcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 6175010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4243552 - 4243605
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  4243552 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 4243605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6253147 - 6253094
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  || |||||||||||||||||||| ||||    
T  6253147 agttcacttagaatttcttatcaacttttatatcttagaaattctagagtctta 6253094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8729419 - 8729472
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  8729419 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 8729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9081306 - 9081359
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  9081306 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 9081359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16305580 - 16305633
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||| ||  ||||||||||||||||||||||| ||||    
T  16305580 agttcacttagaatttcttataaactttcatatcttagaaattctagagtctta 16305633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17697336 - 17697291
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||    
T  17697336 agttcacttataatttcttatcaactttcatatcttagaaattcta 17697291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20627866 - 20627919
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  |||| |||||||||||||||||| ||||    
T  20627866 agttcacttagaatttcttatcaactttcacatcttagaaattctagagtctta 20627919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26418107 - 26418160
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| || ||||||||| |||| ||||||||||||||||||||||| ||||    
T  26418107 agttcacatagaatttcttaacaaagttcatatcttagaaattctagagtctta 26418160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31303137 - 31303084
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  31303137 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 31303084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33582957 - 33582904
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| || |||||||||||  |||||||||||||||||||||| ||||    
T  33582957 agttcacttagaacttcttatcaaagctcatatcttagaaattctagagtctta 33582904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49553933 - 49553986
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  |||||||||||| |||||||||| ||||    
T  49553933 agttcacttagaatttcttatcaactttcatatcttaggaattctagagtctta 49553986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5213304 - 5213256
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  5213304 agttcacttagaatttcttatcaaagcttatatcttagaaattctagag 5213256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16882016 - 16881968
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  16882016 agttcacttagaatttcttaacaactttcatatcttagaaattctagag 16881968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 31303072 - 31303020
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  31303072 gttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 31303020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46796800 - 46796848
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||||||||||||||||||  ||||||||||  ||||||||||    
T  46796800 agttcacttaaaatttcttatcaaagctcatatcttaagaattctagag 46796848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 12389305 - 12389356
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| |||||||  ||||| ||||||||||||||||||||||| ||||    
T  12389305 ttcacttagaatttctattcaaagttcatatcttagaaattctagagtctta 12389356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 13823790 - 13823739
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| || ||||||||||  ||||||||||||||||||||||| ||||    
T  13823790 ttcacttagaacttcttatcaactttcatatcttagaaattctagagtctta 13823739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 16032320 - 16032269
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| ||||||||| |||| ||||||||||||||||| ||||| ||||    
T  16032320 ttcacttagaatttcttaacaaagttcatatcttagaaattttagagtctta 16032269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 52283457 - 52283410
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| |||||||||||||  ||||||||||| ||||||||||    
T  52283457 agttcacttagaatttcttatcaactttcatatcttaaaaattctaga 52283410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14393435 - 14393477
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| ||||||||| |||| |||||||||||||||||    
T  14393435 agttcacttagaatttcttaccaaagttcatatcttagaaatt 14393477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16811929 - 16811875
Alignment:
Q  1 agttcacttaaaatttct-tatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||| | ||||| ||||||||||||||||||||||| ||||    
T  16811929 agttcacttagaatttctgtttcaaagttcatatcttagaaattctagagtctta 16811875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 19198315 - 19198365
Alignment:
Q  4 tcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  19198315 tcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 19198365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3238419 - 3238366
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||  | ||||||||||| |||||||| ||||    
T  3238419 agttcacttagaatttcttatcaaagcttatatcttagaagttctagagtctta 3238366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10851536 - 10851483
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||  ||  ||||||||||||||||||||||| ||||    
T  10851536 agttcacttataatttcttaaaaactttcatatcttagaaattctagagtctta 10851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11867994 - 11867941
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  | ||||| ||||||||||||||| ||||    
T  11867994 agttcacttagaatttcttatcaacttccatattttagaaattctagagtctta 11867941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14007290 - 14007237
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  |||||||||| |||||||||||| ||||    
T  14007290 agttcacttagaatttcttaacaattttcatatcttggaaattctagagtctta 14007237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16811704 - 16811757
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  |||| |||||||||||||||||| ||||    
T  16811704 agttcacttagaatttcttaacaactttcaaatcttagaaattctagagtctta 16811757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18122046 - 18122091
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    ||||||| || |||||||||||||  ||||||||||||||||||||    
T  18122046 agttcacctagaatttcttatcaactttcatatcttagaaattcta 18122091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18143178 - 18143223
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||  ||||| ||||||||||||||    
T  18143178 agttcacttataatttcttatcaactttcatgtcttagaaattcta 18143223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22766949 - 22767002
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||| ||  ||||||||||||||||| ||||| ||||    
T  22766949 agttcacttagaatttcttattaactttcatatcttagaaattttagagtctta 22767002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 50299960 - 50299915
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||||||||  |||||| ||||||||||||    
T  50299960 agttcacttagaatttcttatcaaagctcatatattagaaattcta 50299915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13699095 - 13699047
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||  ||||||||| |||  |||||||||||||||||||||||    
T  13699095 agttcacttggaatttcttaacaactttcatatcttagaaattctagag 13699047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14955155 - 14955107
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||||||||  ||| ||||||||||||||||||    
T  14955155 agttctcttagaatttcttatcaaagctcagatcttagaaattctagag 14955107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24376828 - 24376775
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  24376828 agttcacttaaaatttcttatcaaagttcatatcttagaaattctagagtctta 24376775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19540139 - 19540086
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19540139 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19540086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22455366 - 22455419
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  22455366 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 22455419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24779097 - 24779044
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  24779097 agttcacttataatttcttatcaaagttcatatcttagaaattctagagtctta 24779044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24851043 - 24851096
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  24851043 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 24851096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31801266 - 31801319
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||| ||||    
T  31801266 agttcacttagaatttcttatcaaaactcatatcttagaaattctagagtctta 31801319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39038019 - 39038072
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  39038019 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 39038072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40782200 - 40782152
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  40782200 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 40782152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 23234727 - 23234676
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  23234727 ttcacttagaatttcttatcaaagttcatatcttagaaattctagagactta 23234676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20152379 - 20152432
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  20152379 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 20152432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22317313 - 22317260
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||| ||||    
T  22317313 agttcacttagaatttcttatcaaagtccatatcttagaaattctagagtctta 22317260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23184680 - 23184733
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||    
T  23184680 agttcacttagaatttcttatcaaagttcatatctaagaaattctagagtctta 23184733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23595943 - 23595996
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||    
T  23595943 agttcacttagaatttcttatcaaagttcatatctaagaaattctagagtctta 23595996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25189121 - 25189068
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||| ||||    
T  25189121 agttcacttagaatttcttatcaaagtttatatcttagaaattctagagtctta 25189068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44880890 - 44880837
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||| ||||    
T  44880890 agttcactttgaatttcttatcaaagttcatatcttagaaattctagagtctta 44880837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10010128 - 10010176
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  10010128 agttcacttagaatttattatcaaagttcatatcttagaaattctagag 10010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9015747 - 9015794
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  9015747 agttcacttagaatttcttatcaactttcatatcttagaaattctaga 9015794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24575758 - 24575711
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||    
T  24575758 agttcacttaaaatttcttaacaactttcatatcttagaaattctaga 24575711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25828854 - 25828811
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattc 44  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  25828854 agttcacttagaatttcttatcaaagttcatatcttagaaattc 25828811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25037639 - 25037681
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  25037639 agttcacttagaatttcttatcaaagttcatatcttagaaatt 25037681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 31328342 - 31328388
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||    
T  31328342 gttcacttagaatttcttatcaaagctcatatcttagaaattctaga 31328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 31335063 - 31335109
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||    
T  31335063 gttcacttagaatttcttatcaaagctcatatcttagaaattctaga 31335109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41122094 - 41122136
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  41122094 agttcacttagaatttcttatcaaagttcatatcttagaaatt 41122136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6574506 - 6574559
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||| ||||||||||| ||||    
T  6574506 agttcacttagaatttcttatcaactttcatatcttataaattctagagtctta 6574559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17963645 - 17963698
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||    
T  17963645 agttcacttagaatttcttatcaaagttcatatcttaaaaattttagagtctta 17963698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18431315 - 18431368
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  18431315 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 18431368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18702463 - 18702410
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  18702463 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 18702410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19114806 - 19114753
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  19114806 agttcacttataatttcttaacaactttcatatcttagaaattctagagtctta 19114753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22188481 - 22188534
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  |||| |||||||||||||||||| ||||    
T  22188481 agttcacttagaatttcttatcaacgttcaaatcttagaaattctagagtctta 22188534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24157538 - 24157485
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  24157538 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 24157485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28701591 - 28701636
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||    
T  28701591 agttcacttagaatttcttatcaactttcatatcttagaaattcta 28701636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14581280 - 14581232
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| ||||| | ||||||||||||||||||||    
T  14581280 agttcacttagaatttcttaacaaaacttatatcttagaaattctagag 14581232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22271854 - 22271806
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||||| || |||||||||||||| |||||||||||| ||||||||||    
T  22271854 agttcacatagaatttcttatcaaagttcatatcttaggaattctagag 22271806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28140979 - 28141027
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| ||||||  |||||||||||||||    
T  28140979 agttcacttagaatttcttatcaaagttcatacattagaaattctagag 28141027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33073948 - 33073900
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  33073948 agttcacttagaatttcttatcaaagctcatatcttaggaattctagag 33073900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34322314 - 34322362
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  34322314 agttcacttagaatttcttatcaaagcttatatcttagaaattctagag 34322362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 6392351 - 6392308
Alignment:
Q  6 acttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||    
T  6392351 acttagaatttcttatcaaagctcatatcttagaaattctagag 6392308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 22802182 - 22802135
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||||||| |||||||| |||||  ||||||||||||||||||||||    
T  22802182 gttcacttagaatttcttttcaaagctcatatcttagaaattctagag 22802135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24843927 - 24843880
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||    
T  24843927 agttcacttagaatttcttaacaactttcatatcttagaaattctaga 24843880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30557701 - 30557752
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| |||||||| |||||  |||||||||||||||||||||| ||||    
T  30557701 ttcacttagaatttcttctcaaagctcatatcttagaaattctagagtctta 30557752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28712077 - 28712123
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctag 47  Q
    |||||||||| |||||||||||||  |||||||| ||||||||||||    
T  28712077 agttcacttagaatttcttatcaactttcatatcgtagaaattctag 28712123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13964357 - 13964410
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||| ||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  13964357 agttaacttagaatttcttaacaactttcatatcttagaaattctagagtctta 13964410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20569127 - 20569180
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  |||| |||||||||||||||||| ||||    
T  20569127 agttcacttagaatttcttaacaactttcagatcttagaaattctagagtctta 20569180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21537629 - 21537682
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||| ||||| |||||||||||||| ||||||||||| ||||| ||||| ||||    
T  21537629 agttgacttagaatttcttatcaaagttcatatcttaaaaattatagagtctta 21537682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21845871 - 21845826
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  21845871 agttcacttagaatttcttaacaactttcatatcttagaaattcta 21845826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24441094 - 24441147
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||  ||  ||||||||||||||||||||||| ||||    
T  24441094 agttcacttagaatttcttaagaactttcatatcttagaaattctagagtctta 24441147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26619478 - 26619531
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| || ||||||||| |||  ||||||||||||||||||||||| ||||    
T  26619478 agttcacatagaatttcttaacaactttcatatcttagaaattctagagtctta 26619531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38781118 - 38781065
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  || |||| ||||||||||||||| ||||    
T  38781118 agttcacttagaatttcttatcaacttttatatattagaaattctagagtctta 38781065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1587411 - 1587455
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattct 45  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||    
T  1587411 agttcacttagaatttcttatcaaagctcatatcttaggaattct 1587455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 22525213 - 22525265
Alignment:
Q  7 cttaaaatttcttatcaaaattcatatcttagaaattctagaggcttagaatt 59  Q
    ||||||||| ||||||||  |||||||||||||||||||  || |||||||||    
T  22525213 cttaaaattgcttatcaactttcatatcttagaaattctttagtcttagaatt 22525265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28551297 - 28551345
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||| ||||||||||    
T  28551297 agttcacttagaatttcttatcaaagcttatatcttaggaattctagag 28551345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 204 - 151
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  204 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7554 - 7501
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  7554 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 7501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37 - 90
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  37 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19006 - 19059
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19006 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18757 - 18704
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  18757 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 18704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22514 - 22562
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  22514 agttcacttagaatttcttatcaaagctcatatcttaggaattctagag 22562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10491 - 10544
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  10491 agttcacttaaaatttcttatcaactttcatatcttagaaattctagagtctta 10544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15155 - 15208
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  15155 agttcacttaaaatttcttatcaactttcatatcttagaaattctagagtctta 15208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37117 - 37170
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  37117 agttcacttagaatttcttatcaaacttcatatcttagaaattctagagtctta 37170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41888 - 41835
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  41888 agttcacttagaatttcttatcaaacttcatatcttagaaattctagagtctta 41835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49061 - 49008
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  49061 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 49008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26357 - 26410
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  26357 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 26410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 84120 - 84067
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  84120 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 84067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 268509 - 268456
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||| ||||  ||||||||||||||||||||||| ||||    
T  268509 agttcacttagaatttcttttcaactttcatatcttagaaattctagagtctta 268456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 219967 - 219914
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  219967 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 219914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 211127 - 211079
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  211127 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 211079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 244664 - 244717
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  244664 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 244717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 377945 - 377989
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattct 45  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||    
T  377945 agttcacttagaatttcttatcaaagttcatatcttagaatttct 377989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17442251 - 17442304
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  17442251 agttcacttataatttcttatcaaagttcatatcttagaaattctagagtctta 17442304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18121539 - 18121592
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  18121539 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 18121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18321589 - 18321642
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  18321589 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 18321642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39693254 - 39693201
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  39693254 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 39693201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43644616 - 43644563
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  43644616 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 43644563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45538868 - 45538921
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  45538868 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 45538921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14990493 - 14990541
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  14990493 agttcacttaaaatttcttatcaaagctcatatcttagaaattctagag 14990541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17526163 - 17526208
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  17526163 agttcacttagaatttcttatcaaagttcatatcttagaaattcta 17526208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18679534 - 18679481
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  18679534 agttcacttagaatttcttatcaaggttcatatcttagaaattctagagtctta 18679481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18718723 - 18718670
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  18718723 agttcacttagaatttcttatcaaggttcatatcttagaaattctagagtctta 18718670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19956768 - 19956821
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19956768 agtttacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19956821  T

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Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20382824 - 20382877
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    
T  20382824 agttcacttagaatttcttaacaaagttcatatcttagaaattctagagtctta 20382877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23264056 - 23264109
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  23264056 agttcacttataatttcttatcaactttcatatcttagaaattctagagtctta 23264109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14989882 - 14989930
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  14989882 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 14989930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18152078 - 18152126
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  18152078 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 18152126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25163791 - 25163743
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||||    
T  25163791 agttcacttagaatttcttatcaaagtttatatcttagaaattctagag 25163743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 19707226 - 19707175
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  19707226 ttcacttagaatttcttatgaaagttcatatcttagaaattctagagtctta 19707175  T

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Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16207015 - 16206973
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  16207015 agttcacttagaatttcttatcaaagttcatatcttagaaatt 16206973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12758194 - 12758247
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||| ||||| ||||||||||||||  |||||||||||||||||||||| ||||    
T  12758194 agtttacttagaatttcttatcaaagctcatatcttagaaattctagagtctta 12758247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18557742 - 18557689
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  18557742 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 18557689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19942954 - 19942901
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  19942954 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 19942901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20255941 - 20255994
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||  ||||||||||| ||||    
T  20255941 agttcacttagaatttcttatcaaagttcatatcttcaaaattctagagtctta 20255994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24646051 - 24645998
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||| |||  |||||||||||||||||||||| ||||    
T  24646051 agttcacttagaatttcttattaaagctcatatcttagaaattctagagtctta 24645998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6407445 - 6407397
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  6407445 agttcacttagaatttcttatcaaagctcatatcttaggaattctagag 6407397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17701461 - 17701413
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| || |||||||||||||| |||||    
T  17701461 agttcacttataatttcttatcaaagttaatatcttagaaattatagag 17701413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18772413 - 18772365
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||||||||||||||||||||||  ||| ||||||||||| |||||||    
T  18772413 agttcacttaaaatttcttatcaactttcgtatcttagaaaatctagag 18772365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22662836 - 22662788
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  22662836 agttctcttagaatttcttatcaaagctcatatcttagaaattctagag 22662788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25850433 - 25850481
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  25850433 agttcacttagaatttcttaacaactttcatatcttagaaattctagag 25850481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40845818 - 40845866
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||| |||| ||||||||||| ||||||||||    
T  40845818 agttcacttagaatttcttataaaaactcatatcttaggaattctagag 40845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 17917250 - 17917297
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  17917250 gttcacttagaatttcttaacaactttcatatcttagaaattctagag 17917297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30421866 - 30421917
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| |||||||||||||  |||| |||||||||||||||||| ||||    
T  30421866 ttcacttagaatttcttatcaactttcacatcttagaaattctagagtctta 30421917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 16188700 - 16188650
Alignment:
Q  4 tcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| ||||||||||||||  ||||||||||||||||| |||| ||||    
T  16188700 tcacttagaatttcttatcaaagctcatatcttagaaattccagagtctta 16188650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 16681734 - 16681772
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaa 40  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  16681734 gttcacttagaatttcttatcaaagttcatatcttagaa 16681772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9320289 - 9320236
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||| ||||||  ||||||||| |||||||||||| ||||    
T  9320289 agttcacttagaatttctcatcaaagctcatatctttgaaattctagagtctta 9320236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15336519 - 15336564
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||||||||  | |||||||||||||||||    
T  15336519 agttcacttagaatttcttatcaaagcttatatcttagaaattcta 15336564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15425584 - 15425629
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||||||||  | |||||||||||||||||    
T  15425584 agttcacttagaatttcttatcaaagcttatatcttagaaattcta 15425629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15516888 - 15516933
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||||||||  | |||||||||||||||||    
T  15516888 agttcacttagaatttcttatcaaagcttatatcttagaaattcta 15516933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17797140 - 17797087
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||| ||||||||| ||||| ||||    
T  17797140 agttcacttagaatttcttatcaactttcatattttagaaattatagagtctta 17797087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29693033 - 29692988
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    ||||||| || |||||||||||||| |||||||||||||| |||||    
T  29693033 agttcacctataatttcttatcaaagttcatatcttagaagttcta 29692988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22673548 - 22673500
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||||||||  |||| |||||||||||||||||    
T  22673548 agttctcttagaatttcttatcaaagctcatgtcttagaaattctagag 22673500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36104916 - 36104868
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||| |||||||  | ||||||||||||||||||||    
T  36104916 agttcacttagaatttcgtatcaaagcttatatcttagaaattctagag 36104868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43639501 - 43639453
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| ||||  | ||||||||||||||||||||    
T  43639501 agttcacttagaatttcttaacaaagcttatatcttagaaattctagag 43639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45292554 - 45292506
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| ||||  ||||||||||| ||||||||||    
T  45292554 agttcacttagaatttcttaacaaagctcatatcttaggaattctagag 45292506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2914044 - 2914097
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  2914044 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 2914097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13138331 - 13138384
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  13138331 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 13138384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13261048 - 13261101
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  13261048 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 13261101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16314973 - 16315026
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  16314973 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 16315026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13472941 - 13472989
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  13472941 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 13472989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19237470 - 19237518
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  19237470 agttcacttagaatttcttaacaaaattcatatcttagaaattctagag 19237518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2499760 - 2499707
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  2499760 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 2499707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5001258 - 5001311
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||| ||||    
T  5001258 agttcactttgaatttcttatcaaagttcatatcttagaaattctagagtctta 5001311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10883606 - 10883659
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||    
T  10883606 agttcacttagaatttcttaacaaagttcatatcttagaaattctagagtctta 10883659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11319129 - 11319076
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||    
T  11319129 agttcacttagaattttttatcaaagttcatatcttagaaattctagagtctta 11319076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14187413 - 14187368
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  14187413 agttcacttagaatttcttatcaaagttcatatcttagaaattcta 14187368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15088272 - 15088219
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| ||||    
T  15088272 agttcacttacaatttcttatcaaagctcatatcttagaaattctagagtctta 15088219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16316990 - 16317043
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||| ||||    
T  16316990 agttcacttagaatttcttatcaaagttcacatcttagaaattctagagtctta 16317043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19328448 - 19328501
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||    
T  19328448 agttcacttagaatttcttatcaaagttcatattttagaaattctagagtctta 19328501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21283808 - 21283861
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  21283808 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 21283861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23280395 - 23280448
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  23280395 agttcaattagaatttcttatcaaagttcatatcttagaaattctagagtctta 23280448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28622793 - 28622846
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||| ||||    
T  28622793 agttcacttagattttcttatcaaagttcatatcttagaaattctagagtctta 28622846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29935779 - 29935832
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||||| ||||    
T  29935779 agttcacttagaatttcttatcaaagttcatatcttcgaaattctagagtctta 29935832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41842706 - 41842759
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||    
T  41842706 agttcacttagaatttattatcaaagttcatatcttagaaattctagagtctta 41842759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41842859 - 41842912
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| |||||||||||||||||| |||| ||||    
T  41842859 agttcacttagaatttcttatcaaatttcatatcttagaaattcaagagtctta 41842912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12174774 - 12174822
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  12174774 agttcacttagaatttcttttcaaagttcatatcttagaaattctagag 12174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14426270 - 14426222
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  14426270 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 14426222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16557024 - 16557072
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  16557024 agttcacttagtatttcttatcaaagttcatatcttagaaattctagag 16557072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16608638 - 16608590
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  16608638 agttcacttagtatttcttatcaaagttcatatcttagaaattctagag 16608590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16310340 - 16310387
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||    
T  16310340 agttcacttagaatttcttatcaaagttcacatcttagaaattctaga 16310387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13034272 - 13034314
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  13034272 agttcacttagaatttcttatcaaagttcatatcttagaaatt 13034314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11792632 - 11792587
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||    
T  11792632 agttcacttagaatttcttatcaaagttcatagcttagaaattcta 11792587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13302584 - 13302531
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  13302584 agttcacttataatttcttaacaactttcatatcttagaaattctagagtctta 13302531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13646114 - 13646061
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  13646114 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 13646061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13683320 - 13683267
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  13683320 agttcacttagaatttcttaacaagtttcatatcttagaaattctagagtctta 13683267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15467639 - 15467586
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||| ||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  15467639 agttcaattagaatttcttatcaactttcatatcttagaaattctagagtctta 15467586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18056684 - 18056737
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  18056684 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 18056737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21692054 - 21692001
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||||    
T  21692054 agttcacttagaatttcatatgaaagttcatatcttagaaattctagagtctta 21692001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28408761 - 28408716
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||    
T  28408761 agttcacttataatttcttatcaaagtgcatatcttagaaattcta 28408716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30025628 - 30025575
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  30025628 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 30025575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33605408 - 33605355
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||  | ||||| ||||||||||||||| ||||    
T  33605408 agttcacttaaaatttcttatcaacttccatattttagaaattctagagtctta 33605355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35953120 - 35953173
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  ||||||||||||||  |||||||||||||||||||||| ||||    
T  35953120 agttcacttggaatttcttatcaaagctcatatcttagaaattctagagtctta 35953173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39284998 - 39285051
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||||||||| ||||    
T  39284998 agttctcttagaatttcttatcaaagttcatatcttaaaaattctagagtctta 39285051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 331365 - 331317
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||  |||||||| ||||||||||||||    
T  331365 agttcacttagaatttcttatcaacgttcatatcctagaaattctagag 331317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4821198 - 4821150
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  4821198 agttcacttagaatttcttataaaagctcatatcttagaaattctagag 4821150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13172789 - 13172837
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  13172789 agttcacttagaatttcttaacaactttcatatcttagaaattctagag 13172837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15704923 - 15704971
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  15704923 agttcacttagaatttcttatcaaagcttatatcttagaaattctagag 15704971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33421471 - 33421425
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctag 47  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||    
T  33421471 agttcacttagaatttcttatcaaagcttatatcttagaaattctag 33421425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7488338 - 7488391
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||| ||||||||||| ||||    
T  7488338 agttcacttagaatttcttaacaactttcatatcttaaaaattctagagtctta 7488391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9098668 - 9098713
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  9098668 agttcacttagaatttcttaacaactttcatatcttagaaattcta 9098713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9099474 - 9099519
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  9099474 agttcacttagaatttcttaacaactttcatatcttagaaattcta 9099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16112319 - 16112372
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||| |||||  ||||||||||| ||||||||||| ||||    
T  16112319 agttcacttagaatttctcatcaactttcatatcttaaaaattctagagtctta 16112372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16411717 - 16411664
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  16411717 agttcacttagaatttcttaacaaatttcatatcttttaaattctagagtctta 16411664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30944760 - 30944805
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||  ||||||||||||| ||||||    
T  30944760 agttcacttagaatttcttatcaactttcatatcttagatattcta 30944805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44466786 - 44466733
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| || ||| ||||||  ||||||||||||||||||||||| ||||    
T  44466786 agttcacttagaaattcatatcaactttcatatcttagaaattctagagtctta 44466733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1292753 - 1292705
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||| ||||||||||    
T  1292753 agttcacttagaatttcttatcaaagcttatatcttaggaattctagag 1292705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8182653 - 8182605
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||| ||||||||  ||||||||||| ||||||||||    
T  8182653 agttcacttagaatttattatcaaagctcatatcttaggaattctagag 8182605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18362007 - 18362055
Alignment:
Q  6 acttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||| ||||    
T  18362007 acttagaatttcttataaactttcatatcttagaaattctagagtctta 18362055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20113119 - 20113172
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  20113119 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 20113172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21624816 - 21624763
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  21624816 agttcacttaaaatttcttatcaactttcatatcttagaaattctagagtctta 21624763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24116557 - 24116504
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  24116557 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 24116504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19951994 - 19952042
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  19951994 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 19952042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7763381 - 7763328
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||    
T  7763381 agttcacttagaatttcttatcaaagttcatatcttagaaattatagagtctta 7763328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12347817 - 12347764
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  12347817 agttcacttaaaatttcttaacaactttcatatcttagaaattctagagtctta 12347764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12715843 - 12715896
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||| ||||    
T  12715843 agttcacttcgaatttcttatcaaagttcatatcttagaaattctagagtctta 12715896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15532048 - 15532101
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||    
T  15532048 agttcacttagaatttcttatcaaagttcatattttagaaattctagagtctta 15532101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16265573 - 16265626
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  16265573 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 16265626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19470394 - 19470341
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19470394 agtttacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19470341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20731127 - 20731180
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  20731127 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 20731180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22801866 - 22801813
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  22801866 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 22801813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29597801 - 29597756
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  29597801 agttcacttagaatttcttatcaaagttcatatcttagaaattcta 29597756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29917743 - 29917690
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||    
T  29917743 agttcacttagaatttcttatcaaagttcatatcttataaattctagagtctta 29917690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19833453 - 19833501
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  19833453 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 19833501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9717569 - 9717516
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| | |||||||||||||  ||||||||||||||||||||||| ||||    
T  9717569 agttcactcagaatttcttatcaattttcatatcttagaaattctagagtctta 9717516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17446076 - 17446129
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  17446076 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 17446129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21034716 - 21034663
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  21034716 agttcacttagaatttcttagcaactttcatatcttagaaattctagagtctta 21034663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23296453 - 23296400
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  |||||||||||||||||| |||| ||||    
T  23296453 agttcacttataatttcttatcaaccttcatatcttagaaattcgagagtctta 23296400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32543991 - 32543938
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||| ||||||||||| ||||    
T  32543991 agttcacttagaatttcttatcaactttcatatcttataaattctagagtctta 32543938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16876631 - 16876583
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  16876631 agttcacttagaatttcttatcaaagcttatatcttagaaattctagag 16876583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17867320 - 17867272
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  17867320 agttcacttagaatttcttaacaactttcatatcttagaaattctagag 17867272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17877103 - 17877055
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  17877103 agttcacttagaatttcttaacaactttcatatcttagaaattctagag 17877055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21617971 - 21617923
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  21617971 agttcacttagaatttcttatcaaagcttatatcttagaaattctagag 21617923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 17381298 - 17381259
Alignment:
Q  6 acttaaaatttcttatcaaaattcatatcttagaaattct 45  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  17381298 acttagaatttcttatcaaagttcatatcttagaaattct 17381259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14100859 - 14100913
Alignment:
Q  1 agttcacttaaaatttcttat-caaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||| | |||| ||||||||||||||||||||||| ||||    
T  14100859 agttcacttagaatttcttcttcaaagttcatatcttagaaattctagagtctta 14100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16915153 - 16915107
Alignment:
Q  1 agttcacttaaaatttcttatcaaa-attcatatcttagaaattcta 46  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  16915153 agttcacttagaatttcttatcaaactttcatatcttagaaattcta 16915107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7811740 - 7811687
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||| ||||| ||||    
T  7811740 agttcacttagaatttcttaacaactttcatatcttagaaattttagagtctta 7811687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13144733 - 13144680
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  ||||||||| |||  ||||||||||||||||||||||| ||||    
T  13144733 agttcactttgaatttcttaacaactttcatatcttagaaattctagagtctta 13144680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 15954412 - 15954375
Alignment:
Q  12 aatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  15954412 aatttcttatcaaagctcatatcttagaaattctagag 15954375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19623708 - 19623656
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| || |||||||||||||| ||||| ||||    
T  19623708 agttcacttagaatttcttatcaaagtt-atatcttagaaattatagagtctta 19623656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19688506 - 19688453
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||| ||||||||||| ||||    
T  19688506 agttcacttagaatttcttaacaactttcatatcttataaattctagagtctta 19688453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19875562 - 19875509
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||| | |||  ||||||||||||||||||||||| ||||    
T  19875562 agttcacttagaatttctcaacaactttcatatcttagaaattctagagtctta 19875509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23230916 - 23230863
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||||||||||||| |||| || |||||||| ||||| ||||| ||||    
T  23230916 agttcacttaaaatttcttaacaaattttatatcttataaattatagagtctta 23230863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25930204 - 25930151
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||| ||||| ||||    
T  25930204 agttcacttagaatttcttaacaactttcatatcttagaaattttagagcctta 25930151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10704957 - 10705005
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  ||||||||||||||||| |||||    
T  10704957 agttcacttagaatttcttaacaactttcatatcttagaaattatagag 10705005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12422989 - 12422941
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||| | ||||||||||||||  ||||||||||| ||||||||||    
T  12422989 agttcactcagaatttcttatcaaagctcatatcttaggaattctagag 12422941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17316946 - 17316994
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| ||||  ||||||||||| ||||||||||    
T  17316946 agttcacttagaatttcttaacaaagctcatatcttaggaattctagag 17316994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17927518 - 17927470
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||| |||  |||||||||||||||||||||||    
T  17927518 agttcgcttagaatttcttaacaactttcatatcttagaaattctagag 17927470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1577592 - 1577539
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  1577592 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 1577539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19717249 - 19717196
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19717249 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 19717196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21028521 - 21028468
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  21028521 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 21028468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22600545 - 22600598
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  22600545 agttcacttataatttcttatcaaagttcatatcttagaaattctagagtctta 22600598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32786293 - 32786346
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  32786293 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 32786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35039892 - 35039839
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  35039892 agttcacttagaatttcttatcaaagttcatatcttagaaattctagagtctta 35039839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10757151 - 10757103
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  10757151 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 10757103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12284151 - 12284103
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  12284151 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 12284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33256703 - 33256751
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33256703 agttcacttataatttcttatcaaagttcatatcttagaaattctagag 33256751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33276875 - 33276923
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33276875 agttcacttataatttcttatcaaagttcatatcttagaaattctagag 33276923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1900070 - 1900017
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||    
T  1900070 agttcacttagaatttcgtatcaaagttcatatcttagaaattctagagtctta 1900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2268256 - 2268203
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  2268256 agttcgcttagaatttcttatcaaagttcatatcttagaaattctagagtctta 2268203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12624907 - 12624960
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||    
T  12624907 agttcacttagaatttcttatgaaagttcatatcttagaaattctagagtctta 12624960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23036860 - 23036913
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  23036860 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 23036913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38282290 - 38282237
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||    
T  38282290 agttcacttagaatttgttatcaaagttcatatcttagaaattctagagtctta 38282237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2266814 - 2266766
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||    
T  2266814 agttcacttagaatttcttatcaactttcatatcttagaaattctagag 2266766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19215339 - 19215291
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  19215339 agttcacttagaatttcttaacaaagttcatatcttagaaattctagag 19215291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21192218 - 21192266
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  21192218 agttcacttagaatttcttatcaaagttcacatcttagaaattctagag 21192266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 29215520 - 29215468
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  29215520 gttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 29215468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 16235664 - 16235715
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  16235664 ttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 16235715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22202088 - 22202134
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctag 47  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||    
T  22202088 agttcacttagaatttcttatcaaagttcaaatcttagaaattctag 22202134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2327790 - 2327843
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||| |||  |||||||||||||||||||||| ||||    
T  2327790 agttcacttagaatttcttataaaagctcatatcttagaaattctagagtctta 2327843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2834413 - 2834368
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||    
T  2834413 agttcatttagaatttcttatcaaagttcatatcttagaaattcta 2834368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7309545 - 7309492
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  7309545 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 7309492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16233484 - 16233537
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  16233484 agttcacttagaatttcttaacaaccttcatatcttagaaattctagagtctta 16233537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20909136 - 20909083
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||| |||||||  ||||||||||||||||||||||| ||||    
T  20909136 agttcacttagaatttattatcaactttcatatcttagaaattctagagtctta 20909083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26702482 - 26702535
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| | |||||||||||||| ||||||||||||||||| ||||| ||||    
T  26702482 agttcactcagaatttcttatcaaagttcatatcttagaaattatagagtctta 26702535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30571923 - 30571878
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||    
T  30571923 agttcacttagaatttcttatcaaagctcatatcttagaaattcta 30571878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18130364 - 18130412
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  18130364 agttcacttagaatttcttaacaactttcatatcttagaaattctagag 18130412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 18614641 - 18614589
Alignment:
Q  3 ttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggcttag 55  Q
    |||||||| ||||||||| |||  ||||||||||||||||||||||| |||||    
T  18614641 ttcacttagaatttcttaacaactttcatatcttagaaattctagagtcttag 18614589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44824115 - 44824163
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||    
T  44824115 agttcacttagaatttcttatcaaagcttatatcttagaaattctagag 44824163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48570584 - 48570632
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  48570584 agttcacttagaatttcttatcaaagctcatatcttaggaattctagag 48570632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48703929 - 48703881
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||    
T  48703929 agttcacttagaatttcttaacaactttcatatcttagaaattctagag 48703881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9346501 - 9346448
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||| ||| ||||    
T  9346501 agttcacttagaatttcttaacaactttcatatcttagaaattcttgagtctta 9346448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10250712 - 10250667
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| ||||||||||||||  ||||||||||| |||||||    
T  10250712 agttcacttagaatttcttatcaaagctcatatcttaggaattcta 10250667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22153583 - 22153530
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||| | ||||||||| |||  ||||||||||||||||||||||| ||||    
T  22153583 agttcactcagaatttcttaacaactttcatatcttagaaattctagagtctta 22153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23054096 - 23054043
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  ||||||||| |||  ||||||||||||||||||||||| ||||    
T  23054096 agttcacttggaatttcttaacaactttcatatcttagaaattctagagtctta 23054043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30892821 - 30892768
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||| ||| |||||||||| ||| |||||| |||||||||||||||| ||||    
T  30892821 agttcatttagaatttcttattaaagttcataacttagaaattctagagtctta 30892768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14263784 - 14263832
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| |||||||| ||||| ||||||| |||||||||||||||    
T  14263784 agttctcttataatttcttttcaaagttcatattttagaaattctagag 14263832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 21684422 - 21684470
Alignment:
Q  6 acttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||| ||||    
T  21684422 acttagaatttcttataaactttcatatcttagaaattctagagcctta 21684470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21702540 - 21702492
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||| | ||||||||||||||  ||||||||||| ||||||||||    
T  21702540 agttcactcataatttcttatcaaagctcatatcttaggaattctagag 21702492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25448919 - 25448967
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||||||||||| ||| ||||| ||||||||||||||||    
T  25448919 agttctcttagaatttcttatccaaactcataccttagaaattctagag 25448967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 31359048 - 31358996
Alignment:
Q  4 tcacttaaaatttcttatcaaaattcatatcttagaaattctagaggcttaga 56  Q
    ||||||| ||||||||| |||  ||||||||||||||||| ||||| ||||||    
T  31359048 tcacttagaatttcttaacaactttcatatcttagaaattttagagtcttaga 31358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13300 - 13252
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  13300 agttcacttagaatttcttatcaaagttcatatcttagaaattctagag 13252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13771 - 13724
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  13771 agttcacttagaatttcttaccaaaattcatatcttagaaattctaga 13724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2374 - 2427
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||    
T  2374 agttcacttagaatttcttatcaaagttcatatctaagaaattctagagtctta 2427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9696 - 9643
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  9696 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 9643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9684 - 9632
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  9684 agttcacttagaatttcttatcaaa-ttcatatcttagaaattctagagtctta 9632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27814 - 27867
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  27814 agttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 27867  T

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Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14845 - 14800
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  14845 agttcacttataatttcttatcaaagttcatatcttagaaattcta 14800  T

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Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2953 - 2900
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| ||||    
T  2953 agttcacttagaatttcttatcaaagctcatatcttagaaattctagagtctta 2900  T

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Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19851 - 19904
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  19851 agttcaattagaatttcttatcaaagttcatatcttagaaattctagagtctta 19904  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 99590 - 99638
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    ||||| |||| ||| ||||||||||  ||||||||||||||||||||||    
T  99590 agttctcttagaatgtcttatcaaagctcatatcttagaaattctagag 99638  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 74310 - 74265
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  74310 agttcacttagaatttcttatcaaagttcatatcttagaaattcta 74265  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 212084 - 212031
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  212084 agttcacttaaaatttcttaccaagtttcatatcttagaaattctagagtctta 212031  T

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Target: scaffold1359 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1039 - 1087
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  1039 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 1087  T

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Target: scaffold0607 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5734 - 5686
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  5734 agttcacttagaatttcttatcaaaactcatatcttaggaattctagag 5686  T

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Target: scaffold0515 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5910 - 5862
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  5910 agttcacttataatttcttttcaaagttcatatcttagaaattctagag 5862  T

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Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7124 - 7172
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  7124 agttcacttagaatttcttatcaaagctcatatcttagaaattctagag 7172  T

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Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5920 - 5872
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  5920 agttcacttataatttcttttcaaagttcatatcttagaaattctagag 5872  T

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Target: scaffold0047 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 9628 - 9584
Alignment:
Q  5 cacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  9628 cacttagaatttcttatcaaagttcatatcttagaaattctagag 9584  T

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Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 103298 - 103246
Alignment:
Q  2 gttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  103298 gttcacttagaatttcttatcaactttcatatcttagaaattctagagtctta 103246  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 90440 - 90488
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||  |||||||||||||||||||||||    
T  90440 agttcacttagaatttcttatcaactttcatatcttagaaattctagag 90488  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 429 - 376
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  429 agttcacttagaatttcttaacaaatttcatatcttttaaattctagagtctta 376  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44302 - 44344
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  44302 agttcacttagaatttcttatcaaagttcatatcttagaaatt 44344  T

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Target: scaffold1747 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1046 - 993
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||| || |||||||||||||||||||| ||||    
T  1046 agttcacttagaatttcttaacaaagttaatatcttagaaattctagagtctta 993  T

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Target: scaffold1745 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 365 - 418
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||| || |||||||||||||||||||| ||||    
T  365 agttcacttagaatttcttaacaaagttaatatcttagaaattctagagtctta 418  T

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Target: scaffold0622 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2388 - 2335
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||| ||||||  ||||||||||||||||||||||| ||||    
T  2388 agttcacttagaatttcatatcaactttcatatcttagaaattctagagtctta 2335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9635 - 9582
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  9635 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 9582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6074 - 6127
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||| |||||||  |||||||||||||||||||||| ||||    
T  6074 agttcacttagaatttcatatcaaagctcatatcttagaaattctagagtctta 6127  T

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Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21359 - 21412
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  21359 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 21412  T

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Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2357 - 2405
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||  ||||||||||    
T  2357 agttcacttagaatttcttatcaaagctcatatcttaagaattctagag 2405  T

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Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2209 - 2262
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| |||||||||| ||  ||||||||||||||||||||||| ||||    
T  2209 agttcacttagaatttcttataaactttcatatcttagaaattctagagtctta 2262  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 81125 - 81072
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  81125 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 81072  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37128 - 37075
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  37128 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 37075  T

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Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 135188 - 135135
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  135188 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 135135  T

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Target: scaffold0022; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 158838 - 158785
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    ||||||| || |||||||||||||| ||||||| ||||||||||||||| ||||    
T  158838 agttcacatataatttcttatcaaagttcatattttagaaattctagagtctta 158785  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 144635 - 144582
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||    
T  144635 agttcacttagaatttcttaacaactttcatatcttagaaattctagagtctta 144582  T

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Target: scaffold0280 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3113 - 3161
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  3113 agttcacttagaatttcttatcaaagctcatatcttaggaattctagag 3161  T

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Target: scaffold0273 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5358 - 5310
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||||||||||  | |||||||||||||||||||||    
T  5358 agttcacttagaatttcttatcaacttccatatcttagaaattctagag 5310  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8883 - 8835
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  8883 agttcacttagaatttcttatcaaagctcatatcttaggaattctagag 8835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19801 - 19758
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattc 44  Q
    |||||||||| |||||||||||||  ||||||||||||||||||    
T  19801 agttcacttagaatttcttatcaactttcatatcttagaaattc 19758  T

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Target: scaffold0210 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1387 - 1340
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctaga 48  Q
    |||||||||| |||||||||||||  ||| ||||||||||||||||||    
T  1387 agttcacttagaatttcttatcaactttcctatcttagaaattctaga 1340  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 59745 - 59703
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaatt 43  Q
    |||||||||| ||||||||||||||  ||||||||||||||||    
T  59745 agttcacttagaatttcttatcaaagatcatatcttagaaatt 59703  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 59287 - 59233
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggcttag 55  Q
    |||||||||| ||| ||||| |||  ||||||||||||||||||||||| |||||    
T  59287 agttcacttagaatatcttaacaattttcatatcttagaaattctagagtcttag 59233  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 65789 - 65837
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||||||||  | ||||| ||||||||||||||    
T  65789 agttcacttagaatttcttatcaaagcttatatcctagaaattctagag 65837  T

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Target: scaffold0859 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2709 - 2664
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattcta 46  Q
    |||| ||||| |||||||||||||  ||||||||||||||||||||    
T  2709 agtttacttagaatttcttatcaactttcatatcttagaaattcta 2664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2175 - 2228
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  ||||||||| |||  ||||||||||||||||||||||| ||||    
T  2175 agttcactttgaatttcttaacaactttcatatcttagaaattctagagtctta 2228  T

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Target: scaffold0498 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 656 - 709
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||||||||||| ||||||| ||||    
T  656 agttcacttagaatttcttaacaactttcatatcttagaaactctagagtctta 709  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36565 - 36618
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||  |||||| ||||||| ||||||||||| ||||||||||| ||||    
T  36565 agttcactttgaatttcatatcaaagttcatatcttataaattctagagtctta 36618  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4394 - 4447
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagaggctta 54  Q
    |||||||||| ||||||||| |||  ||||||| ||||||||||||||| ||||    
T  4394 agttcacttagaatttcttaacaactttcatattttagaaattctagagtctta 4447  T

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Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1901 - 1949
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||||||| |||  ||||||||||||||||| |||||    
T  1901 agttcacttagaatttcttaacaactttcatatcttagaaattatagag 1949  T

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Target: scaffold0471 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3033 - 2985
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| |||||| |||||||  | ||||||||||||||||||||    
T  3033 agttcacttagaatttcgtatcaaagcttatatcttagaaattctagag 2985  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22390 - 22342
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||| ||| |||  |||||||||||||||||||||||    
T  22390 agttcacttagaattttttaccaactttcatatcttagaaattctagag 22342  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32169 - 32217
Alignment:
Q  1 agttcacttaaaatttcttatcaaaattcatatcttagaaattctagag 49  Q
    |||||||||| ||||| ||| |||  |||||||||||||||||||||||    
T  32169 agttcacttagaatttattaacaactttcatatcttagaaattctagag 32217  T

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