View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3107_high_63 (Length: 250)
Name: NF3107_high_63
Description: NF3107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3107_high_63 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37753838 - 37754079
Alignment:
| Q |
1 |
cttaaaacacaagataataacaaagacaaagttttcattgttactacatctacagttggtttccaaacatgaattggatcaatcaagagcctccaaatcc |
100 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
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| T |
37753838 |
cttaaaacacaagacaataacaaagacaaagttttcattgttactacatctacagttggtttccaaatatgaagtggatcaatcaagagcctccaaatcc |
37753937 |
T |
|
| Q |
101 |
aatcattgttgtagtagaaagatagtatattcaaactcatgaagcagtatagaaacaaactgttcaaacgcatacaaattccaacccacacagtcgcttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37753938 |
aatcattgttgtagtagaaagatagtatattcaaactcatgaagcggtatagaaacaaactgttcaaacgcatacaaattccaacccacacagtcacttt |
37754037 |
T |
|
| Q |
201 |
acaatgtataattcttccagataagttttacatattcatctc |
242 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37754038 |
acaatgtataattcttccagataagttttacatattcttctc |
37754079 |
T |
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