View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3107_high_93 (Length: 202)

Name: NF3107_high_93
Description: NF3107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3107_high_93
NF3107_high_93
[»] chr3 (20 HSPs)
chr3 (1-202)||(22630747-22630948)
chr3 (1-199)||(22468256-22468454)
chr3 (1-161)||(22368220-22368380)
chr3 (32-199)||(22632204-22632371)
chr3 (1-195)||(22358310-22358504)
chr3 (2-199)||(22443048-22443245)
chr3 (2-199)||(22431461-22431657)
chr3 (1-195)||(22635811-22636005)
chr3 (1-122)||(22354119-22354242)
chr3 (2-194)||(21937118-21937310)
chr3 (2-197)||(22458798-22458993)
chr3 (2-197)||(22481779-22481974)
chr3 (2-196)||(22436943-22437137)
chr3 (53-156)||(21930424-21930527)
chr3 (53-156)||(22034520-22034623)
chr3 (53-156)||(22052736-22052839)
chr3 (55-134)||(22615621-22615700)
chr3 (53-194)||(22027965-22028106)
chr3 (53-194)||(22186953-22187094)
chr3 (53-101)||(21945682-21945730)
[»] chr4 (1 HSPs)
chr4 (109-199)||(29610973-29611062)
[»] chr8 (1 HSPs)
chr8 (53-101)||(27294606-27294654)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 22630747 - 22630948
Alignment:
Q  1 cgagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattc 100  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  22630747 cgagacaccgtgatccattcatgacaatcaaagtgtttaacgacctttcggttgtcaaaaattttcttggcaagagtggttttccccagtcctcccattc 22630846  T
Q  101 caacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatccaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22630847 caacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtctcgtggctcgtcaaagcccacaacatcagcttcatccaa 22630946  T
Q  201 at 202  Q
    ||    
T  22630947 at 22630948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 22468256 - 22468454
Alignment:
Q  1 cgagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattc 100  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22468256 cgagacaccgtgatccatacatgacaatcaaaatgtttaacgaccttttggttgtcaaaaactttcttggctatagtggtttttcccagtcctcccattc 22468355  T
Q  101 caacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatcca 199  Q
    |||| || |||||||| ||||| |||||||||||||||| || | |||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||    
T  22468356 caactatggagacaacggtgcgctctgctcttccctctaccaacaaatcaatcaatttgtctcgtggctcttcaaatcccacaagatcagcttcatcca 22468454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22368220 - 22368380
Alignment:
Q  1 cgagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattc 100  Q
    ||||| ||||||||||||| | || ||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22368220 cgagaaaccgtgatccataaacgacaatcaaagtgtttaacgaccttttggttgtcaaaaactttcttggctagagtggtttttcccagtcctcccattc 22368319  T
Q  101 caacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtc 161  Q
    ||||||| |||||||||||||| | |||||||||||||| || | ||||||||||||||||    
T  22368320 caacaatggagacaactgtgcggtgtgctcttccctctaccaacaaatcaatcaatttgtc 22368380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 22632204 - 22632371
Alignment:
Q  32 agtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctct 131  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  22632204 agtgtttaacgatctttcggttgtcaaaaactttcttggctagagtggttttccccagtcctcccattccaataatggagacaactgtgcgatctgctct 22632303  T
Q  132 tccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatcca 199  Q
    |||||||| |||||||| ||| | ||| ||   |||||| ||||| ||||||||||||||||||||||    
T  22632304 tccctctaccagccaattaattagtttctctattggctcttcaaatcccacaacatcagcttcatcca 22632371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 22358310 - 22358504
Alignment:
Q  1 cgagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattc 100  Q
    ||||||||||| ||||||||| ||  || ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  22358310 cgagacaccgtaatccatacacgacgatcaaagtgttttacgacctttgggttgtcaaaaactttcttcgctagagtggtttttcccagtcctcccattc 22358409  T
Q  101 caacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttca 195  Q
    ||||||| ||||||| ||| || |||||||||||  ||| ||   |||||||||||||||| | || ||  ||||| || |||||||||||||||    
T  22358410 caacaatggagacaattgtccggtctgctcttcctgctaccaaaaaatcaatcaatttgtctcttgtcttatcaaatcctacaacatcagcttca 22358504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 22443048 - 22443245
Alignment:
Q  2 gagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    |||||||| ||||||||| | || | | |||||| ||||| |||||| |||||||||||| ||   |||||| ||||||||| |||| ||||||||||||    
T  22443048 gagacaccatgatccataaaagacagtcaaagtgcttaactaccttttggttgtcaaaaatttgtctggctagagtggtttttcccaatcctcccattcc 22443147  T
Q  102 aacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatcca 199  Q
    |||||| |||||||||||||| ||| |||||||||||| || | |||||||||||||||| | |||||| |||||||| |||| ||||||||||||||    
T  22443148 aacaatggagacaactgtgcggtcttctcttccctctaccaacaaatcaatcaatttgtctcttggctcttcaaagccaacaatatcagcttcatcca 22443245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 22431461 - 22431657
Alignment:
Q  2 gagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    ||||||| |||||||||| | || ||| ||||||||||| |||| |   |||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  22431461 gagacactgtgatccataaacgacaatcaaagtgtttaaggaccctgttgttgtcaaaaactttcttggttagagtggtttttcccagtcctcccattcc 22431560  T
Q  102 aacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatcca 199  Q
     ||||| ||||| |||||| | ||| || |||| | || |||||||||||||||| |||| | |||||| ||||| ||||||||||||||||||||||    
T  22431561 -acaatggagaccactgtgagctcttcttttccatttaccagccaatcaatcaatatgtctcttggctcttcaaatcccacaacatcagcttcatcca 22431657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 22635811 - 22636005
Alignment:
Q  1 cgagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattc 100  Q
    ||||||||||| ||||||||| || ||| ||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||| ||  ||||||||||||    
T  22635811 cgagacaccgtaatccatacacgacaatcaaagtattttacgacctttgggttgtcaaaaactttcttcgctagagtggtttttccttgtcctcccattc 22635910  T
Q  101 caacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttca 195  Q
    |||  || ||||||| ||| || |||||||||||| ||| ||    ||||||||||| ||| | |||||  ||||| || |||||||||||||||    
T  22635911 caaagatggagacaattgtccggtctgctcttcccgctaccaaaagatcaatcaattcgtctcttggcttatcaaatcctacaacatcagcttca 22636005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22354119 - 22354242
Alignment:
Q  1 cgagacaccgtgatccata--catgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccat 98  Q
    ||||| |||||||||||||  ||| | ||| |||||  ||||| |||||| ||||||||||||||||  |||||| ||||||||| ||||||||||||||    
T  22354119 cgagataccgtgatccatatacataacaatcaaagttcttaactaccttttggttgtcaaaaacttttctggctagagtggtttttcccagtcctcccat 22354218  T
Q  99 tccaacaatagagacaactgtgcg 122  Q
    ||||||||| ||||||||||||||    
T  22354219 tccaacaatggagacaactgtgcg 22354242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 194
Target Start/End: Complemental strand, 21937310 - 21937118
Alignment:
Q  2 gagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    ||||||| |||||||||||| || ||| |||||||  |||||| |    | |||||||| ||||||| |||| ||||||||| ||  | |||||||||||    
T  21937310 gagacactgtgatccatacacgacaatcaaagtgtccaacgacatccttgctgtcaaaagctttcttagctagagtggtttttccttgccctcccattcc 21937211  T
Q  102 aacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttc 194  Q
     || | ||| ||||| ||||| ||||| ||||||| ||||| ||||||||||||  |||| | | | | ||||||||||||||| ||||||||    
T  21937210 taccacagaaacaacagtgcgctctgcccttccctttatcatccaatcaatcaaaatgtccctttgtttgtcaaagcccacaacgtcagcttc 21937118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 22458798 - 22458993
Alignment:
Q  2 gagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    |||||||  |||||||||||||| ||| |||||||||||||| |||   || ||||||||| ||||| || | ||| ||||| ||  |||||||| ||||    
T  22458798 gagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttgtcgtcaaaaaccttctttgcaagagttgtttttccttgtcctccctttcc 22458897  T
Q  102 aacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatc 197  Q
    |||||| | ||||| |||| |  || ||||  ||||||||| ||||||||| | | |||| | |||  | |||||||| ||||||||| |||||||    
T  22458898 aacaatggtgacaattgtgtgcacttctctctcctctatcaaccaatcaattagtatgtctcttggaacttcaaagcctacaacatcatcttcatc 22458993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 22481779 - 22481974
Alignment:
Q  2 gagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    |||||||  |||||||||||||| ||| |||||||||||||| |||   || ||||||||| ||||| || | ||| ||||| ||  |||||||| ||||    
T  22481779 gagacactctgatccatacatgacaatcaaagtgtttaacgatcttgttgtcgtcaaaaaccttctttgcaagagttgtttttccttgtcctccctttcc 22481878  T
Q  102 aacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatc 197  Q
    |||||| | ||||| |||| |  || ||||  ||||||||| ||||||||| | | |||| | |||  | |||||||| ||||||||| |||||||    
T  22481879 aacaatggtgacaattgtgtgcacttctctctcctctatcaaccaatcaattagtatgtctcttggaacttcaaagcctacaacatcatcttcatc 22481974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 22436943 - 22437137
Alignment:
Q  2 gagacaccgtgatccatacatgagaattaaagtgtttaacgacctttgggttgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    ||||||| ||||||||||||||| | | ||| ||||| | ||| ||   ||| ||||||||||||||||| | ||| ||||| ||  | |||||||||||    
T  22436943 gagacactgtgatccatacatgacagtcaaattgttttaagactttgatgttctcaaaaactttcttggccagagtagtttttccttgccctcccattcc 22437042  T
Q  102 aacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgt-ggctcgtcaaagcccacaacatcagcttcat 196  Q
     ||||||||||||||||  || ||| ||||||||   | |||||||| || |||| || ||  | ||||| ||||||||||| |||||||||||||    
T  22437043 tacaatagagacaactgcacgctctactcttcccctcaccagccaattaaacaatatg-cgtttgggctcttcaaagcccacgacatcagcttcat 22437137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 21930527 - 21930424
Alignment:
Q  53 tgtcaaaaactttcttggctaaagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaat 152  Q
    ||||||||||||||||||||| ||| ||||| ||  | ||||||||||| || | ||| || || ||||| ||| | ||||||| || || |||||||||    
T  21930527 tgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagacaccacagtgcgctcttcccttccctgtaccatccaatcaat 21930428  T
Q  153 caat 156  Q
    ||||    
T  21930427 caat 21930424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 22034623 - 22034520
Alignment:
Q  53 tgtcaaaaactttcttggctaaagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaat 152  Q
    ||||||||||||||||||||| ||| ||||| ||  | ||||||||||| || | ||| || || ||||| ||| | ||||||| || || |||||||||    
T  22034623 tgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagacaccacagtgcgctcttcccttccctgtaccatccaatcaat 22034524  T
Q  153 caat 156  Q
    ||||    
T  22034523 caat 22034520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 22052839 - 22052736
Alignment:
Q  53 tgtcaaaaactttcttggctaaagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaat 152  Q
    ||||||||||||||||||||| ||| ||||| ||  | ||||||||||| || | ||| || || ||||| ||| | ||||||| || || |||||||||    
T  22052839 tgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccagagaaaccacagtgcgctcttcccttccctttaccatccaatcaat 22052740  T
Q  153 caat 156  Q
    ||||    
T  22052739 caat 22052736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 22615621 - 22615700
Alignment:
Q  55 tcaaaaactttcttggctaaagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctcttcc 134  Q
    |||||||| |||||||| | ||||||||| ||| | ||||||||||| || | ||||||||| ||||| ||| |||||||    
T  22615621 tcaaaaacattcttggcaagagtggttttaccctgccctcccattcccaccacagagacaacagtgcgctctactcttcc 22615700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 22028106 - 22027965
Alignment:
Q  53 tgtcaaaaactttcttggctaaagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaat 152  Q
    ||||||||||||||||||||| ||| ||||| ||  | ||||||||||| || | ||| || || ||||| ||| | ||||||| || || ||||||| |    
T  22028106 tgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagacaccacagtgcgctcttcccttccctgtaccaaccaatcagt 22028007  T
Q  153 caatttgtcgcgtggctcgtcaaagcccacaacatcagcttc 194  Q
    |||| | |  | |||| | ||||| |||||||| ||||||||    
T  22028006 caatctttttcttggcgcttcaaatcccacaacctcagcttc 22027965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 22187094 - 22186953
Alignment:
Q  53 tgtcaaaaactttcttggctaaagtggttttccccagtcctcccattccaacaatagagacaactgtgcgttctgctcttccctctatcagccaatcaat 152  Q
    ||||||||||||||||||||| ||| ||||| ||  | ||||||||||| || | ||| | ||| ||||| ||| | ||||||| || || ||| |||||    
T  22187094 tgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagaaagaacagtgcgctcttcccttccctttaccatccactcaat 22186995  T
Q  153 caatttgtcgcgtggctcgtcaaagcccacaacatcagcttc 194  Q
    |||| | |  | |||| | ||||| |||||||| ||||||||    
T  22186994 caatctttttcttggcgcttcaaatcccacaacctcagcttc 22186953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 21945730 - 21945682
Alignment:
Q  53 tgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    ||||||||||||||||||||| ||||||||| ||  | |||||||||||    
T  21945730 tgtcaaaaactttcttggctagagtggtttttccttgccctcccattcc 21945682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 29610973 - 29611062
Alignment:
Q  109 gagacaactgtgcgttctgctcttccctctatcagccaatcaatcaatttgtcgcgtggctcgtcaaagcccacaacatcagcttcatcca 199  Q
    ||||| |||||||| ||||||||||||| || |||||||||||| ||| | || | |||||| ||||||||  |||| |||||||||||||    
T  29610973 gagacgactgtgcgctctgctcttccct-taccagccaatcaattaatatttctcttggctcttcaaagcctgcaacgtcagcttcatcca 29611062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 27294654 - 27294606
Alignment:
Q  53 tgtcaaaaactttcttggctaaagtggttttccccagtcctcccattcc 101  Q
    ||||||||||||||||| ||| ||||||||| ||  |||||||||||||    
T  27294654 tgtcaaaaactttcttgactagagtggtttttccttgtcctcccattcc 27294606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University