View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3107_low_1 (Length: 3523)

Name: NF3107_low_1
Description: NF3107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3107_low_1
NF3107_low_1
[»] chr1 (49 HSPs)
chr1 (782-3507)||(47885197-47887929)
chr1 (19-723)||(47884432-47885134)
chr1 (381-475)||(47880840-47880934)
chr1 (158-249)||(47880758-47880846)
chr1 (624-682)||(35590895-35590953)
chr1 (631-681)||(12564509-12564559)
chr1 (629-681)||(15558227-15558279)
chr1 (630-681)||(6279409-6279460)
chr1 (627-681)||(10199414-10199468)
chr1 (627-681)||(14629972-14630026)
chr1 (627-681)||(25479591-25479645)
chr1 (627-681)||(28077075-28077129)
chr1 (628-681)||(7137005-7137058)
chr1 (628-681)||(34290246-34290299)
chr1 (630-681)||(23902076-23902127)
chr1 (630-677)||(27140492-27140539)
chr1 (638-681)||(34952225-34952268)
chr1 (632-671)||(37818459-37818498)
chr1 (627-674)||(38503471-38503518)
chr1 (634-676)||(3319945-3319987)
chr1 (627-681)||(6102164-6102218)
chr1 (635-677)||(23402045-23402087)
chr1 (628-681)||(5047156-5047209)
chr1 (628-681)||(45975700-45975753)
chr1 (626-659)||(48748320-48748353)
chr1 (634-675)||(49175635-49175676)
chr1 (538-578)||(2522704-2522744)
chr1 (630-677)||(3224437-3224484)
chr1 (630-681)||(6659524-6659575)
chr1 (638-681)||(8130446-8130489)
chr1 (630-677)||(12477296-12477343)
chr1 (630-681)||(22813619-22813670)
chr1 (630-681)||(26779934-26779985)
chr1 (630-681)||(28262628-28262679)
chr1 (638-681)||(30014095-30014138)
chr1 (627-662)||(31118072-31118107)
chr1 (630-681)||(35179149-35179200)
chr1 (627-678)||(35925703-35925754)
chr1 (627-678)||(46252688-46252739)
chr1 (630-681)||(47598430-47598481)
chr1 (627-677)||(5887000-5887050)
chr1 (627-681)||(10744311-10744365)
chr1 (627-673)||(15361058-15361104)
chr1 (631-681)||(22810638-22810688)
chr1 (527-565)||(23445454-23445492)
chr1 (631-681)||(33722411-33722461)
chr1 (627-681)||(38882918-38882971)
chr1 (639-681)||(49888777-49888819)
chr1 (627-681)||(51695501-51695555)
[»] chr3 (31 HSPs)
chr3 (627-678)||(33883756-33883807)
chr3 (630-681)||(37273144-37273195)
chr3 (638-681)||(44488893-44488936)
chr3 (628-681)||(41644452-41644505)
chr3 (630-681)||(2719478-2719529)
chr3 (630-681)||(12985354-12985405)
chr3 (630-681)||(34924547-34924598)
chr3 (630-681)||(38462291-38462342)
chr3 (631-681)||(13371127-13371177)
chr3 (627-681)||(21367677-21367731)
chr3 (627-681)||(24785215-24785269)
chr3 (639-681)||(25075076-25075118)
chr3 (627-681)||(39602216-39602270)
chr3 (630-679)||(43875477-43875526)
chr3 (627-659)||(45432945-45432977)
chr3 (630-681)||(1217809-1217860)
chr3 (630-681)||(22214668-22214719)
chr3 (630-681)||(23785265-23785316)
chr3 (630-681)||(31010412-31010463)
chr3 (630-681)||(34414793-34414844)
chr3 (630-681)||(43115066-43115117)
chr3 (631-678)||(49546494-49546541)
chr3 (628-679)||(53789468-53789519)
chr3 (625-699)||(16790382-16790456)
chr3 (627-681)||(20669182-20669236)
chr3 (630-664)||(21862184-21862218)
chr3 (631-681)||(23793594-23793644)
chr3 (631-681)||(27792882-27792932)
chr3 (627-681)||(34610812-34610866)
chr3 (627-681)||(36887514-36887568)
chr3 (530-588)||(44014712-44014770)
[»] chr8 (28 HSPs)
chr8 (627-681)||(30389109-30389163)
chr8 (626-681)||(8060679-8060734)
chr8 (630-681)||(30277254-30277305)
chr8 (627-681)||(42215088-42215142)
chr8 (627-678)||(2458572-2458623)
chr8 (630-681)||(8062339-8062390)
chr8 (630-681)||(25869275-25869326)
chr8 (627-677)||(3536951-3537001)
chr8 (627-681)||(9956820-9956874)
chr8 (639-681)||(36643911-36643953)
chr8 (631-677)||(43504765-43504811)
chr8 (637-682)||(11795101-11795146)
chr8 (628-681)||(30918123-30918176)
chr8 (527-583)||(7008701-7008757)
chr8 (537-573)||(40728332-40728368)
chr8 (627-671)||(41606909-41606953)
chr8 (631-678)||(4558811-4558858)
chr8 (627-674)||(11185238-11185285)
chr8 (630-681)||(11569466-11569517)
chr8 (630-681)||(28769348-28769399)
chr8 (630-681)||(31862503-31862554)
chr8 (638-677)||(39881769-39881808)
chr8 (627-677)||(9835987-9836036)
chr8 (530-588)||(16162858-16162916)
chr8 (627-677)||(20672764-20672814)
chr8 (631-681)||(35534880-35534930)
chr8 (627-681)||(42215312-42215366)
chr8 (627-677)||(44401575-44401625)
[»] chr7 (19 HSPs)
chr7 (627-681)||(2825237-2825291)
chr7 (627-681)||(38010724-38010778)
chr7 (630-681)||(24363610-24363661)
chr7 (630-677)||(39280983-39281030)
chr7 (627-681)||(18749823-18749877)
chr7 (631-681)||(22283754-22283804)
chr7 (627-677)||(28165105-28165155)
chr7 (627-681)||(34035927-34035981)
chr7 (629-681)||(7244690-7244742)
chr7 (630-681)||(3468624-3468675)
chr7 (627-682)||(40191325-40191380)
chr7 (627-681)||(9038122-9038175)
chr7 (627-677)||(9423600-9423650)
chr7 (627-681)||(20553113-20553167)
chr7 (631-677)||(37064230-37064276)
chr7 (627-681)||(39907813-39907867)
chr7 (627-681)||(39967930-39967984)
chr7 (631-681)||(42281524-42281574)
chr7 (631-681)||(44821969-44822019)
[»] chr5 (26 HSPs)
chr5 (627-681)||(32059365-32059419)
chr5 (631-681)||(38104867-38104917)
chr5 (627-700)||(37611221-37611294)
chr5 (627-700)||(37787951-37788024)
chr5 (627-681)||(4014430-4014484)
chr5 (627-680)||(4619718-4619771)
chr5 (630-681)||(7319017-7319068)
chr5 (627-678)||(19460580-19460631)
chr5 (630-681)||(41957460-41957511)
chr5 (627-681)||(7984979-7985033)
chr5 (631-681)||(18704046-18704096)
chr5 (627-681)||(36638757-36638811)
chr5 (628-681)||(33533546-33533599)
chr5 (529-573)||(7705911-7705955)
chr5 (630-665)||(10280607-10280642)
chr5 (634-681)||(12242723-12242770)
chr5 (537-588)||(17369301-17369352)
chr5 (630-664)||(1899181-1899215)
chr5 (627-677)||(6740290-6740340)
chr5 (631-681)||(12425581-12425631)
chr5 (627-681)||(15402835-15402889)
chr5 (631-681)||(16889745-16889795)
chr5 (630-681)||(19138726-19138779)
chr5 (631-681)||(20028500-20028550)
chr5 (639-681)||(32172663-32172705)
chr5 (627-681)||(39105474-39105528)
[»] chr2 (36 HSPs)
chr2 (630-678)||(35993389-35993437)
chr2 (627-681)||(22681191-22681245)
chr2 (627-681)||(29316781-29316835)
chr2 (627-681)||(35379022-35379076)
chr2 (631-680)||(42457959-42458008)
chr2 (529-573)||(750255-750299)
chr2 (629-677)||(1647250-1647298)
chr2 (630-678)||(10285873-10285921)
chr2 (627-681)||(750680-750734)
chr2 (637-675)||(5781685-5781723)
chr2 (627-673)||(7928305-7928351)
chr2 (639-681)||(11513908-11513950)
chr2 (627-681)||(44443331-44443385)
chr2 (628-681)||(16867749-16867802)
chr2 (629-681)||(11488287-11488339)
chr2 (627-679)||(29628749-29628801)
chr2 (627-675)||(41809251-41809299)
chr2 (527-578)||(1830147-1830198)
chr2 (630-681)||(34652045-34652096)
chr2 (630-681)||(36415682-36415733)
chr2 (630-681)||(42131627-42131678)
chr2 (627-681)||(1625910-1625964)
chr2 (627-681)||(8017444-8017498)
chr2 (627-681)||(9174825-9174879)
chr2 (531-573)||(15370238-15370280)
chr2 (627-681)||(28039338-28039392)
chr2 (638-688)||(30552661-30552711)
chr2 (627-681)||(33942160-33942214)
chr2 (627-681)||(38078416-38078470)
chr2 (537-575)||(40059382-40059420)
chr2 (537-575)||(40085282-40085320)
chr2 (627-681)||(40682401-40682454)
chr2 (627-681)||(41407615-41407668)
chr2 (631-681)||(41817178-41817228)
chr2 (627-681)||(42420007-42420061)
chr2 (639-681)||(45229521-45229563)
[»] chr6 (17 HSPs)
chr6 (631-680)||(281858-281907)
chr6 (627-681)||(4420653-4420707)
chr6 (627-681)||(6647397-6647451)
chr6 (631-681)||(20512654-20512704)
chr6 (632-681)||(7931800-7931849)
chr6 (637-681)||(835265-835309)
chr6 (626-678)||(1408272-1408324)
chr6 (627-659)||(6536979-6537011)
chr6 (537-572)||(2460867-2460902)
chr6 (631-681)||(1401119-1401169)
chr6 (630-680)||(3201956-3202006)
chr6 (631-661)||(3217200-3217230)
chr6 (627-681)||(7931732-7931786)
chr6 (627-681)||(17241258-17241312)
chr6 (630-664)||(27909647-27909681)
chr6 (635-681)||(28088236-28088282)
chr6 (630-680)||(34939755-34939805)
[»] chr4 (36 HSPs)
chr4 (637-681)||(31006028-31006072)
chr4 (629-681)||(46110213-46110265)
chr4 (627-666)||(8469383-8469422)
chr4 (630-681)||(53673667-53673718)
chr4 (627-681)||(1137722-1137776)
chr4 (627-681)||(7694016-7694070)
chr4 (627-681)||(29263380-29263434)
chr4 (627-677)||(31038873-31038923)
chr4 (630-675)||(5131259-5131304)
chr4 (529-574)||(55414326-55414371)
chr4 (637-681)||(11158373-11158417)
chr4 (633-681)||(18628555-18628603)
chr4 (629-681)||(22666499-22666551)
chr4 (637-681)||(29601024-29601068)
chr4 (627-659)||(43824315-43824347)
chr4 (630-677)||(19429723-19429770)
chr4 (629-680)||(22662021-22662072)
chr4 (627-666)||(24929518-24929557)
chr4 (628-663)||(25332803-25332838)
chr4 (537-572)||(27124068-27124103)
chr4 (630-677)||(28614817-28614864)
chr4 (630-681)||(34398694-34398745)
chr4 (628-675)||(41603418-41603465)
chr4 (630-681)||(49219149-49219200)
chr4 (631-681)||(6364159-6364209)
chr4 (527-573)||(7367965-7368011)
chr4 (632-678)||(14011247-14011293)
chr4 (627-681)||(17884078-17884132)
chr4 (530-588)||(22662165-22662223)
chr4 (530-588)||(22666644-22666702)
chr4 (527-573)||(25571372-25571418)
chr4 (631-681)||(35064865-35064915)
chr4 (532-578)||(38478820-38478866)
chr4 (630-684)||(45927356-45927410)
chr4 (631-681)||(50800040-50800089)
chr4 (627-681)||(55084487-55084541)
[»] scaffold0159 (1 HSPs)
scaffold0159 (637-675)||(27017-27055)
[»] scaffold0089 (1 HSPs)
scaffold0089 (631-681)||(33637-33687)
[»] scaffold0003 (1 HSPs)
scaffold0003 (630-681)||(306336-306387)


Alignment Details
Target: chr1 (Bit Score: 2280; Significance: 0; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 2280; E-Value: 0
Query Start/End: Original strand, 782 - 3507
Target Start/End: Original strand, 47885197 - 47887929
Alignment:
Q  782 tactgagttttaaaaaataagctgcaagataagttttgtatctaaacagggcctaatag--tttgtgataggctgatttgtgtttgaatttgatttggga 879  Q
    ||||||||||| || |||||| ||||| ||| ||||| |||||||||||||| |||||   |||||||||||||| ||||||||||||||||| ||||||    
T  47885197 tactgagttttcaacaataagatgcaaaata-gttttctatctaaacagggcataatataatttgtgataggctggtttgtgtttgaatttgaattggga 47885295  T
Q  880 actttccaattcttgtttcaatttcaggaagattcaatttggttgtttactgctgaacattttgtgggttctcgaccattcacagttcaagcaaactatc 979  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47885296 actttccaattcttgtttcaatttcaggaagattcaatttggttgtttactgctgaaaattttgtgggttctcgaccattcacagttcaagcaaactatc 47885395  T
Q  980 caggtttttctgaaggtagtcattttttactgaatgagtaaagaattgaccagttcnnnnnnnnnnnngatgaatgtatatgttattaatttatgcattc 1079  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||||||| |||            ||||||| || ||||||||      |||||||    
T  47885396 caggtttttctgaaggtagcaatattttgctgaatgagtaaagaattgaccatttctttttctttgccgatgaatatacatgttattg-----tgcattc 47885490  T
Q  1080 aagtaaattctgaatttggttaatgattgtcaggtattgaagtaggtgatgaaattgttatagatggtggaatggcatgctttgttgtcattgaaaaaac 1179  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47885491 aagtgaattctgaatttggttaatgattgtcaggtattgaagtaggtgatgaaattgttatagatggtggaatggcatgctttgttgtcattgaaaaaac 47885590  T
Q  1180 tggaaatgatttgcgttgtaagtgtatagatgctggtcttttcttacccagagccaaatgtagtttctggagagatggaaagcttgtcgggaggaattac 1279  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47885591 tggaaatgatttgcgttgtaagtgcatagatgctggtcttttcttacccagagccaaatgtagtttctggagagatggaaagcttgtcgggaggaattac 47885690  T
Q  1280 aagctccccactctatcaacaaaggtatattttgctgcaaagcatttttcccgcacttatttagttaagatcatgcaggacaa-ttttcatccgggacag 1378  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47885691 aagctccccactctatcaacaaaggtatattttgctgcgaagcgtttttcccgcacttatttagttaagatcatgcaggacaaattttcatccgggacag 47885790  T
Q  1379 ttacttctatatgatgtgaactgctgccaaaacccctgtttgatannnnnnnn-gctgatctgatgaaataatatatcagttcaaaaatccacgttccat 1477  Q
    |||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  47885791 ttacttctatatgatgtgaactgctgccaaaacccctgtttgatatttttttttgctgatctgatgaaataatatatcagttcaaaaatccacgttccat 47885890  T
Q  1478 ttgtcaagacagttaaattgtatattagttgcttcctagacttgttttgactagttttcaaatattgcttattagaactactctaaagagcaggaattac 1577  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47885891 ttgtcaagacagttaaattgtatattagttgcttcctagacttgttttgactagttttcaaatattgcttattagaactactctaaagagcaggaattac 47885990  T
Q  1578 tggtagacttaccttcaattaccaagtaaatgttgcaaagtctttcccttttacaattttagtataattatttctatacaagtttgatcggcaaaatgat 1677  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  47885991 tggtagacttaccttcaattaccaagtaaatgttgcaaagtctttcccttttacaattttagtataactatttctatacaagtttgattggcaaaatgat 47886090  T
Q  1678 cagtatagcacactaataagctactttattcagatctgaacatttcatatacttaaattataatgatgtgagtgaaannnnnnnnnnnnnnnnggtataa 1777  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||    
T  47886091 cagtatagcacactaataagctactttattcagatctgaacatttcatatacttaaattataatgatgtgagtgaacttttttatttatttttggtataa 47886190  T
Q  1778 ttctttgaatagtggctaagaatttcaaatctttccttgatatgttttatcttataaatttatccacaggattgggcagatataaactttggtatagctg 1877  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886191 ttctttgaatagtggctaagaatttcaaatctttccttgatatgttttatcttataaatttatccacaggattgggcagatataaactttggtatagctg 47886290  T
Q  1878 agggtgttgannnnnnngccctatcctttgtcaaccatgctgactctgttaaggatttaaagaactacctctctggaaaatcaaccaagtaaggaagcat 1977  Q
    ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886291 agggtgttgatttttttgccctatcctttgtcaaccatgctgactctgttaaggatttaaagaactacctctctggaaaatcaaccaagtaaggaagcat 47886390  T
Q  1978 agattcactgaagaatcatttatacagtttatcaatatatttagccaattggtcctttgaaaagatgctgatgtgttttcttctgtataagtgctttaat 2077  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886391 agattcaccgaagaatcatttatacagtttatcaatatatttagccaattggtcctttgaaaagatgctgatgtgttttcttctgtataagtgctttaat 47886490  T
Q  2078 tcaaagttattttagcacaaattaagaatattaaatggtattttcagatccataaaagtattggcaaagatagaaagcttagaatcccttcataatctgg 2177  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886491 tcaaagttattttagcacaaattaagaatgttaaatggtattttcagatccataaaagtattggcaaagatagaaagcttagaatcccttcataatctgg 47886590  T
Q  2178 aggaaatagtgaaagcgtctgatggaatcatggtagctcgaggtgaccttggagtcgaaataccacttgagcagattcctacagttcaggaggatataat 2277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886591 aggaaatagtgaaagcgtctgatggaatcatggtagctcgaggtgaccttggagtcgaaataccacttgagcagattcctacagttcaggaggatataat 47886690  T
Q  2278 tcacatttgcagacaacaaaataagccagtgattgtagcttctcagcttcttgagtcaatgattgagtatccaacaccaactcgtgccgaggtaaaatca 2377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886691 tcacatttgcagacaacaaaataagccagtgattgtagcttctcagcttcttgagtcaatgattgagtatccaacaccaactcgtgccgaggtaaaatca 47886790  T
Q  2378 atttatacatccacgagatgatcgtaaacttagagcagaattcctatctatgataataagttttcagttttccttttggaatgctgaacttgtacttacc 2477  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47886791 atttatacatccac--gatgatcgtaaacttagagcagaattcctatctatgataataagttttcagtttttcttttggaatgctgaacttgtacttacc 47886888  T
Q  2478 tattacaataaatcttcgcttttatgcaataaaggtagcagatatttctgaagcagttcgacagtacgcggatgctttgatgttgtctggtgagtcagct 2577  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886889 tattacaataaatcttcgcttttatgcaataaaggtagcagatatttctgaagcagttcgacagtacgcggatgctttgatgttgtctggtgagtcagct 47886988  T
Q  2578 atcggttcatttggagagaaagcattggcagtgttggatatgaccagcagtagaatggaatcatggagtagggaggaaaatagacaaagtcttctcaatc 2677  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47886989 atcggttcatttggacagaaagcattgacagtgttggatatgaccagcagtagaatggaatcatggagtagggaggaaaatagacaaagtcttctcaatc 47887088  T
Q  2678 accataaacttggagcatcattgccagattgcatcactgagcaaatatgcaattgtgctgttgaaatgggtacttcatattccttcttcccacctgtaat 2777  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47887089 accataaacttggagcatcattgccagattgcatcactgagcaaatatgcaattgtgctgttgaaatgggtacttcatattccttcttcccacctgtaat 47887188  T
Q  2778 catattagtccatgtttagattcacttttggagaatttggactgtgtgcggtgtgactacatgtagtagccacatctagaccgtccaattagatttcaat 2877  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47887189 catattagtccatgtttagattcacttttggagaatttgaactgtgtgcggtgtgactacatgtagtagccacatctagaccgtccgattagatttcaat 47887288  T
Q  2878 tcagattttga--nnnnnnnnnaatataaaatactaaacttgatatttggactgtccagattggctggctgtgtgcagtcatggggttgtggctacacac 2975  Q
    |||||||||||           ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47887289 tcagattttgatttttttttttaaactaaaatagtaaacttgatatttggactgtccagattggctggctgtgtgcagtcatggggttgtggctacacac 47887388  T
Q  2976 aacccaaatccacttttgaaagacttaaaattgatttttgtatgtttgggacttctcaattgaaattgannnnnnnnctcttaaattcattcaaatttga 3075  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  47887389 aacccaaatccacttttgaaagacttaaaattgatttttgtatgtttgggacttctcaattgaaattga-tttttttctcttaaattcattcaaatttga 47887487  T
Q  3076 agcaaagacttgtagcttttgactcaacgtgacttttacactaaannnnnnngttcaaccccctttgacatgaacataaccaaacataaatcatttatct 3175  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47887488 agcaaagacttgtagcttttgactcaacgtgacttttacactaaatttttttgttcaaccccctttgacatgaacataaccaaacataaatcatttatct 47887587  T
Q  3176 taaattcactttcaactaaaatcaactctttaaaatcaattgaatcaaaatatatttttgccacagtaaaatcaaatagacacttaaccttgttatgaaa 3275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47887588 taaattcactttcaactaaaatcaactctttaaaatcaattgaatcaaaatatatttttgtcacagtaaaatcaaatagacacttaaccttgttatgaaa 47887687  T
Q  3276 tctgcataagtagattattgaattcactccttttgtgct----------tgtctgcagccaacaaacttggtgtggatgccatctttgtttacacaaaac 3365  Q
    |||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47887688 tctgcataagtagattattgaattcactccttttgtgcttgtctgtgtctgtctgcagccaacaaacttggtgtggatgccatctttgtttacacaaaac 47887787  T
Q  3366 atggatatatggcatcattactatctcgcaaccgtccagatcctcccatctttgctttcaccgacgatgaaagtactcgaatggctctgaatttgcaatg 3465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47887788 atggatatatggcatcattactatctcgcaaccgtccagatcctcccatctttgctttcaccgacgatgaaagtactcgaatggctctgaatttgcaatg 47887887  T
Q  3466 gggtgttgtaccacttcttgttgatttatcagatgatgctga 3507  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47887888 gggtgttgtaccacttcttgttgatttatcagatgatgctga 47887929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 567; E-Value: 0
Query Start/End: Original strand, 19 - 723
Target Start/End: Original strand, 47884432 - 47885134
Alignment:
Q  19 gtaaggcaatctagtatatctggaaacccttcacttgatttgaatcatcgtgtttcaaatcttagatttaagggaaaacaacatgtggttaaggttagag 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47884432 gtaaggcaatctagtatatctggaaacccttcacttgatttgaatcatcgtgtttcaaatcttagatttaagggaaaacaacatgttgttaaggttagag 47884531  T
Q  119 caacagtggaagtgggtggtgtggaggatttnnnnnnn-gaagaagcaatgttgcattggagggaaatttaggtttggatatggtttcagaaggagagtt 217  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47884532 caacagtggaagtgggtggtgtggaggatttaaaaaaaagaagaagcaatgttgcattggagggaaatttgggtttggatatggtttcagaaggagagtt 47884631  T
Q  218 aatggtgaagggttttagagggttgaggaagacaaagcttgtgtgtactgttggtcctgcttgtagttcattggaggatctagagaagttggcattggga 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47884632 aatggtgaagggttttagagggttgaggaagacaaagcttgtgtgtactgttggtcctgcttgtagttcattggaggatctagagaagttggcattggga 47884731  T
Q  318 ggaatgaatgttgctaggcttaatatgtgtcatggtactagagaatggcaccgtgatgttattaggaagattaagaagcttaatgaggaaaagggtttct 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47884732 ggaatgaatgttgctaggcttaatatgtgtcatggtactagagaatggcaccgtgatgttattaggaagattaagaagcttaatgaggaaaagggtttct 47884831  T
Q  418 ctgtttctgttatgattgatactgaaggtagtcagattcatgttgttgatcatggagctccttcctcggttaaagttgaggtaatgatcttacttataat 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47884832 ctgtttctgttatgattgatactgaaggtagtcagattcatgttgttgatcatggagcaccttcctcggttaaagttgaggtaatgatcttacttataat 47884931  T
Q  518 taacatatgttagggcctcttt---ggattgacttatttgagtatatctactggcataatcactcgtgacactg-nnnnnnnagaacttatgaaaacata 613  Q
    || |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||      |    
T  47884932 tagcatatgttagggcctctttggaggattgacttatttgagtatatctactggcataatcactcgtgacactgttttttttagaacttatga------a 47885025  T
Q  614 aacatatcatgcagttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaattaatttggtttgattttcccatgttgtagaa 713  Q
    ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  47885026 aacatcttttgcagttcataagttgttttcagcttatttccataagttctctatgatagctt-ggaaattaatttggcttgattttcccttgttgtagaa 47885124  T
Q  714 ataacttatt 723  Q
    ||||||||||    
T  47885125 ataacttatt 47885134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-28
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 47880840 - 47880934
Alignment:
Q  381 aggaagattaagaagcttaatgaggaaaagggtttctctgtttctgttatgattgatactgaaggtagtcagattcatgttgttgatcatggagc 475  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  47880840 aggaagattaagaagctgaatgaggaaaatggtttatctggtttggtcatgattgatactgaaggtagtcagattcatgttgttgatcatggagc 47880934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 47880758 - 47880846
Alignment:
Q  158 aagaagcaatgttgcattggagggaaatttaggtttggatatggtttcagaaggagagttaatggtgaagggttttagagggttgaggaaga 249  Q
    ||||||||||||||||||| |||||| ||| || ||||||||||||||   ||||||||||||||||||||||||| || ||||||||||||    
T  47880758 aagaagcaatgttgcattgtagggaactttggggttggatatggtttc---aggagagttaatggtgaagggtttttgaaggttgaggaaga 47880846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-17
Query Start/End: Original strand, 624 - 682
Target Start/End: Original strand, 35590895 - 35590953
Alignment:
Q  624 gcagttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaat 682  Q
    ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  35590895 gcagttcatcagttgttttcagcttatttccataagctctccatgatagcttatgaaat 35590953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 12564509 - 12564559
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttatgaaa 12564559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 681
Target Start/End: Complemental strand, 15558279 - 15558227
Alignment:
Q  629 tcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||| |||||||||||| |||| |||||||||    
T  15558279 tcataagttgttttcagcttatttctataagttctctaggatatcttatgaaa 15558227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 6279460 - 6279409
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  6279460 cataagttgttttcagcgtatttccataagctctctaggatagcttatgaaa 6279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 10199414 - 10199468
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||| |||||| ||||||  |||||||||||||    
T  10199414 gttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaa 10199468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 14629972 - 14630026
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||||||  |||| | ||||||||||||||    
T  14629972 gttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaa 14630026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 25479645 - 25479591
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| ||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  25479645 gttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaa 25479591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 28077075 - 28077129
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||| ||||| ||||||  |||||||||||||    
T  28077075 gttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaa 28077129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 681
Target Start/End: Original strand, 7137005 - 7137058
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||| |||||||||||||| ||||||||||| | ||||||||||||||    
T  7137005 ttcataagttattttcagcttattttcataagttctccaagatagcttatgaaa 7137058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 681
Target Start/End: Complemental strand, 34290299 - 34290246
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||| ||||||||||  | ||||||||||||||    
T  34290299 ttcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaa 34290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 23902076 - 23902127
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||| |||||    
T  23902076 cataagttgttttcagcttacttccataagctctctaagatagcttttgaaa 23902127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 677
Target Start/End: Complemental strand, 27140539 - 27140492
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  27140539 cataagttgttttcagcttatttgcataagctctccatgatagcttat 27140492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 638 - 681
Target Start/End: Complemental strand, 34952268 - 34952225
Alignment:
Q  638 gttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||| |||||||||||| |||||||||||||||    
T  34952268 gttttcagcttattttcataagttctctttgatagcttatgaaa 34952225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 671
Target Start/End: Complemental strand, 37818498 - 37818459
Alignment:
Q  632 taagttgttttcagcttatttccataagttctctatgata 671  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  37818498 taagttgttttcagcttatttccataagttctctaggata 37818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 674
Target Start/End: Original strand, 38503471 - 38503518
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagct 674  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||    
T  38503471 gttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 634 - 676
Target Start/End: Original strand, 3319945 - 3319987
Alignment:
Q  634 agttgttttcagcttatttccataagttctctatgatagctta 676  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  3319945 agttgttttcagcttatatccataagatctctatgatagctta 3319987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 6102218 - 6102164
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| ||||||||||||||||||||||| |||||   ||||||||||||||    
T  6102218 gttcataaattgttttcagcttatttccataaattctcccagatagcttatgaaa 6102164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 635 - 677
Target Start/End: Complemental strand, 23402087 - 23402045
Alignment:
Q  635 gttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  23402087 gttgttttcagcttatttccataagctctcgatgatagcttat 23402045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 681
Target Start/End: Complemental strand, 5047209 - 5047156
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| | ||||||||||||||||||||||| |||  ||||||||||||||||    
T  5047209 ttcatacgctgttttcagcttatttccataagctcttcatgatagcttatgaaa 5047156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 681
Target Start/End: Complemental strand, 45975753 - 45975700
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaa 45975700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 626 - 659
Target Start/End: Original strand, 48748320 - 48748353
Alignment:
Q  626 agttcataagttgttttcagcttatttccataag 659  Q
    ||||||||||||||||||||||||||||||||||    
T  48748320 agttcataagttgttttcagcttatttccataag 48748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 634 - 675
Target Start/End: Complemental strand, 49175676 - 49175635
Alignment:
Q  634 agttgttttcagcttatttccataagttctctatgatagctt 675  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  49175676 agttgttttcagcttatttccataagttctacatgatagctt 49175635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 578
Target Start/End: Complemental strand, 2522744 - 2522704
Alignment:
Q  538 ttggattgacttatttgagtatatctactggcataatcact 578  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacact 2522704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 677
Target Start/End: Complemental strand, 3224484 - 3224437
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||||| ||||||||||| |||||||||||||  |||||||||    
T  3224484 cataagttgttctcagcttattttcataagttctctagaatagcttat 3224437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 6659575 - 6659524
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||| ||||| |||||  | ||||||||||||    
T  6659575 cataagttgttttcagcttatttcgataagctctcttggttagcttatgaaa 6659524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 681
Target Start/End: Complemental strand, 8130489 - 8130446
Alignment:
Q  638 gttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||| |||||||||||| || ||||||||||||||||    
T  8130489 gttttcagcttgtttccataagttttccatgatagcttatgaaa 8130446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 677
Target Start/End: Original strand, 12477296 - 12477343
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||    
T  12477296 cataagttgttttcagcttatttccatacactctccatgatagcttat 12477343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 22813619 - 22813670
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||| ||||||    
T  22813619 cataagttgttttgagctttttttcataagttctctacgatagctaatgaaa 22813670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 26779934 - 26779985
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||| ||||||| ||||||||||  | ||||||||||||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaa 26779985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 28262628 - 28262679
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| ||||||| |||||||||||||||||||| || |||| |||||||||    
T  28262628 cataaattgtttttagcttatttccataagttctataggataacttatgaaa 28262679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 681
Target Start/End: Original strand, 30014095 - 30014138
Alignment:
Q  638 gttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||| |||||||||||  |||||||||||||    
T  30014095 gttttcagcttatttccgtaagttctctagcatagcttatgaaa 30014138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 31118107 - 31118072
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttc 662  Q
    |||||| |||||||||||||||||||||||||||||    
T  31118107 gttcatcagttgttttcagcttatttccataagttc 31118072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 35179200 - 35179149
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| |||||||||||||||| ||||||||||| || ||| |||||||||    
T  35179200 cataagctgttttcagcttattttcataagttctccataataacttatgaaa 35179149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 35925754 - 35925703
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    ||||||||| |||||||| |||||||||||||  |||| |||||||||||||    
T  35925754 gttcataagctgttttcaacttatttccataaactctccatgatagcttatg 35925703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 46252688 - 46252739
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    ||||||||||||||||||| |||||| |||||| |||| | |||||||||||    
T  46252688 gttcataagttgttttcaggttattttcataagctctccaagatagcttatg 46252739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 47598430 - 47598481
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||| || ||||||| |||| | ||||||||||||||    
T  47598430 cataagttgttttcagcttgttgccataagctctccaggatagcttatgaaa 47598481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 5887000 - 5887050
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||||||||||||||||||||||| | ||||||||| | ||| ||||||    
T  5887000 gttcataagttgttttcagcttattttcgtaagttctccaagatggcttat 5887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 10744365 - 10744311
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||| |||||||  |||||||||||| || |||||||||||    
T  10744365 gttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaa 10744311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 673
Target Start/End: Complemental strand, 15361104 - 15361058
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagc 673  Q
    |||||||||||||||||||||||||| |||||| |||| | ||||||    
T  15361104 gttcataagttgttttcagcttattttcataagctctccaggatagc 15361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 22810638 - 22810688
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| |||||| | ||||||||| |||||||||||||||| |||||||||    
T  22810638 ataagctgttttgaccttatttccgtaagttctctatgataacttatgaaa 22810688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 565
Target Start/End: Complemental strand, 23445492 - 23445454
Alignment:
Q  527 ttagggcctctttggattgacttatttgagtatatctac 565  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  23445492 ttagggcatctttggattgacttatttgagtttatctac 23445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 33722411 - 33722461
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||  ||| || |||| |||||||||    
T  33722411 ataagttgttttcagcttatttccataacctctgtaggataacttatgaaa 33722461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 38882918 - 38882971
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||| ||||||| ||||||||||||| || |||||||||||    
T  38882918 gttcataaggtgttttcaacttattttcataagttctcta-gagagcttatgaaa 38882971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 49888819 - 49888777
Alignment:
Q  639 ttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaa 49888777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 51695501 - 51695555
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| | |||||||||||||| ||||| ||||| | ||||||||||||||    
T  51695501 gttcataagctattttcagcttattttcataaattctccaagatagcttatgaaa 51695555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000006; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000006
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 33883756 - 33883807
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  33883756 gttcataagttgttttcagcttattttcataagttctctaagatagcttatg 33883807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 37273195 - 37273144
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  37273195 cataagttgttttcaacttatttccataagttctccaagatagcttatgaaa 37273144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 681
Target Start/End: Complemental strand, 44488936 - 44488893
Alignment:
Q  638 gttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  44488936 gttttcagcttatttccataagttctctaagatagcttatgaaa 44488893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 681
Target Start/End: Original strand, 41644452 - 41644505
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| |||||||||||||||||| |||| |||||| ||||||||||||||    
T  41644452 ttcataagctgttttcagcttatttccttaagatctctacgatagcttatgaaa 41644505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 2719529 - 2719478
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||| ||||||||||| ||||||||||| | ||||||||||||||    
T  2719529 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaa 2719478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 12985354 - 12985405
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||| |||||||||||||||||||  | ||||||||||||||    
T  12985354 cataagttgttttcggcttatttccataagttcttgaggatagcttatgaaa 12985405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 34924547 - 34924598
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||| |||||||||||||||||| |||||| |||||| ||||||||||||||    
T  34924547 catatgttgttttcagcttattttcataagctctctaagatagcttatgaaa 34924598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 38462342 - 38462291
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  38462342 cataagttgttttcagcttatttccataagctatcttggatagcttatgaaa 38462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 13371177 - 13371127
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||| |||  || |||||||||||||    
T  13371177 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 13371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 21367731 - 21367677
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| ||| |||||||||||||||| ||||||||||| | ||||||||||||||    
T  21367731 gttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaa 21367677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 24785269 - 24785215
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||| ||||||||| |||||| |||| | ||||||||||||||    
T  24785269 gttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaa 24785215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 25075118 - 25075076
Alignment:
Q  639 ttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  25075118 ttttcagcttattttcattagttctctatgatagcttatgaaa 25075076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 39602216 - 39602270
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| ||||||||| ||||||| ||||||||||| | ||||||||||||||    
T  39602216 gttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaa 39602270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 679
Target Start/End: Complemental strand, 43875526 - 43875477
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatga 679  Q
    |||||||||||||| | |||||||||||||||||| | ||||||||||||    
T  43875526 cataagttgttttctgattatttccataagttctccaggatagcttatga 43875477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 659
Target Start/End: Original strand, 45432945 - 45432977
Alignment:
Q  627 gttcataagttgttttcagcttatttccataag 659  Q
    |||||||||||||||||||||||||||||||||    
T  45432945 gttcataagttgttttcagcttatttccataag 45432977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 1217809 - 1217860
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||| |||| || ||||||||||| | ||||||||||||||    
T  1217809 cataagttgttttcatcttactttcataagttctcaaggatagcttatgaaa 1217860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 22214668 - 22214719
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| |||||||||||||||||| |||  |||||| ||||||||||||||    
T  22214668 cataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaa 22214719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 23785316 - 23785265
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||| |||||||||| |||| |||| ||||| |||||    
T  23785316 cataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaa 23785265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 31010463 - 31010412
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| ||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  31010463 cataagctgttttcagcttaattccataagctctctatgataggttacgaaa 31010412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 34414793 - 34414844
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||| |||||  |||| ||||||| ||||||||    
T  34414793 cataagttgttttcagcttattttcataaactctccatgatagtttatgaaa 34414844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 43115117 - 43115066
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| |||||||||||||||||||||||| |||| ||||||| | ||||||    
T  43115117 cataacttgttttcagcttatttccataagctctcaatgatagttcatgaaa 43115066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 631 - 678
Target Start/End: Original strand, 49546494 - 49546541
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    |||||||||||||||| |||||| ||||| |||| |||||||||||||    
T  49546494 ataagttgttttcagcatatttcaataagctctccatgatagcttatg 49546541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 679
Target Start/End: Original strand, 53789468 - 53789519
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatga 679  Q
    |||||||| | ||||||||||| || ||||||||||| ||||||||||||||    
T  53789468 ttcataagcttttttcagcttaatttcataagttctccatgatagcttatga 53789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 699
Target Start/End: Original strand, 16790382 - 16790456
Alignment:
Q  625 cagttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaattaatttggtttgatttt 699  Q
    |||| |||||| ||||||||| |||||| |||||| | || | |||||||||||||| ||||||| ||| |||||    
T  16790382 cagtccataagctgttttcagtttattttcataagctatccaagatagcttatgaaaataatttgattttatttt 16790456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 20669236 - 20669182
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| ||||||| |||||||| |||||| |||| | ||||||||||||||    
T  20669236 gttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaa 20669182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 664
Target Start/End: Original strand, 21862184 - 21862218
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctc 664  Q
    |||||||||||||||||||||||||||||| ||||    
T  21862184 cataagttgttttcagcttatttccataagctctc 21862218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 23793644 - 23793594
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||| ||||| | || | ||||||||||||||    
T  23793644 ataagttgttttcagcttatttctataagctttccaagatagcttatgaaa 23793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 27792932 - 27792882
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||| ||||| |||  ||||||| ||||||||    
T  27792932 ataagttgttttcagcttatttctataagctctacatgatagtttatgaaa 27792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 34610812 - 34610866
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||| |||||||||| |||| ||||||||| | | ||||||||||||||    
T  34610812 gttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaa 34610866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 36887568 - 36887514
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||||||||||| ||||||||||  | ||| ||||||||||    
T  36887568 gttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaa 36887514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 588
Target Start/End: Original strand, 44014712 - 44014770
Alignment:
Q  530 gggcctctttggattgacttatttgagtatatctactggcataatcactcgtgacactg 588  Q
    |||||| ||||||||| ||||||||||| |||||||| |||||| |||| |||| ||||    
T  44014712 gggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactg 44014770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.00000000000002; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 30389163 - 30389109
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  30389163 gttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaa 30389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 626 - 681
Target Start/End: Complemental strand, 8060734 - 8060679
Alignment:
Q  626 agttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||||    
T  8060734 agttcataagttattttcagcttatttccataagctctctaggattgcttatgaaa 8060679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 30277254 - 30277305
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  30277254 cataagttgttttcagcttatttccataaactctctaggatagcttatgaaa 30277305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 42215088 - 42215142
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||| |||||| |||| | ||||||||||||||    
T  42215088 gttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaa 42215142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 2458572 - 2458623
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    ||||||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  2458572 gttcataagctgttttcagtttatttccataagctctctaggatagcttatg 2458623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 8062390 - 8062339
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||||||||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaa 8062339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 25869275 - 25869326
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||  |||| |||||||| |||||||    
T  25869275 cataagttgttttcagcttatttccataaactctccatgatagcctatgaaa 25869326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 3536951 - 3537001
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||||| ||||||||||||||||||||||||||||| | |||| |||||    
T  3536951 gttcataaattgttttcagcttatttccataagttctccaagatatcttat 3537001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 9956820 - 9956874
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||| ||||||||||||||| ||||||||||| | ||||| ||||||||    
T  9956820 gttcataagtagttttcagcttattttcataagttctccaagatagattatgaaa 9956874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 36643911 - 36643953
Alignment:
Q  639 ttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  36643911 ttttcagcttatttccatacgttctccatgatagcttatgaaa 36643953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 677
Target Start/End: Complemental strand, 43504811 - 43504765
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||    
T  43504811 ataagctgttttcagcttatttccataagttctccaagatagcttat 43504765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 637 - 682
Target Start/End: Complemental strand, 11795146 - 11795101
Alignment:
Q  637 tgttttcagcttatttccataagttctctatgatagcttatgaaat 682  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaat 11795101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 681
Target Start/End: Complemental strand, 30918176 - 30918123
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||||| |||| | || | |||||||||    
T  30918176 ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaa 30918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 583
Target Start/End: Complemental strand, 7008757 - 7008701
Alignment:
Q  527 ttagggcctctttggattgacttatttgagtatatctactggcataatcactcgtga 583  Q
    |||| |||| |||| |||||||||||||||| ||||||||||||||| |||| ||||    
T  7008757 ttagagcctgtttgaattgacttatttgagtttatctactggcataagcacttgtga 7008701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 573
Target Start/End: Original strand, 40728332 - 40728368
Alignment:
Q  537 tttggattgacttatttgagtatatctactggcataa 573  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40728332 tttggattgacttatttgagtctatctactggcataa 40728368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 671
Target Start/End: Original strand, 41606909 - 41606953
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgata 671  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||    
T  41606909 gttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 631 - 678
Target Start/End: Complemental strand, 4558858 - 4558811
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    |||||||||||| || ||||||||||||| |||||| |||||||||||    
T  4558858 ataagttgtttttagtttatttccataagctctctaggatagcttatg 4558811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 674
Target Start/End: Complemental strand, 11185285 - 11185238
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagct 674  Q
    |||||||||||||||||| ||||||||||| || |||| |||||||||    
T  11185285 gttcataagttgttttcaacttatttccatcagctctccatgatagct 11185238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 11569466 - 11569517
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||| || ||  |||| ||||||||||||||||    
T  11569466 cataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaa 11569517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 28769348 - 28769399
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||  |||| |  |||||||||||||    
T  28769348 cataagttgttttcagcttatttccataaactctccaaaatagcttatgaaa 28769399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 31862554 - 31862503
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| |||||||||||||||| |||||| |||||| |||| |||||||||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaa 31862503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 677
Target Start/End: Original strand, 39881769 - 39881808
Alignment:
Q  638 gttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttat 39881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 9835987 - 9836036
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||| |||||||| ||||||||||||||||| | ||||||||||||    
T  9835987 gttcataagctgttttcatcttatttccataagttc-cgatgatagcttat 9836036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 588
Target Start/End: Complemental strand, 16162916 - 16162858
Alignment:
Q  530 gggcctctttggattgacttatttgagtatatctactggcataatcactcgtgacactg 588  Q
    |||||| ||||||||| ||||||||||| |||||||| |||||| |||| |||| ||||    
T  16162916 gggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactg 16162858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Complemental strand, 20672814 - 20672764
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||| |||||||||||||||| |||||| |||| | ||||||||||    
T  20672814 gttcataagctgttttcagcttattttcataagctctccaggatagcttat 20672764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 35534880 - 35534930
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||| || ||||||||||||| |||||| ||||||| ||||||    
T  35534880 ataagttgtttttagtttatttccataagctctctaagatagctaatgaaa 35534930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 42215312 - 42215366
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||||||||||| |||||| |||| | |||||| |||||||    
T  42215312 gttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaa 42215366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Complemental strand, 44401625 - 44401575
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||||  ||||||||||||||||||||||||||||| | ||| ||||||    
T  44401625 gttcatacattgttttcagcttatttccataagttctccaggatggcttat 44401575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.00000000000002; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 2825237 - 2825291
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  2825237 gttcataagttattttcagcttatttccataagttctctaggatagcttgtgaaa 2825291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 38010778 - 38010724
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||    
T  38010778 gttcataagctgtttttagcttatttccataagttctctaggatagattatgaaa 38010724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 24363610 - 24363661
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||  |||| | ||||||||||||||    
T  24363610 cataagttgttttcagcttatttccataacctctccaggatagcttatgaaa 24363661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 677
Target Start/End: Complemental strand, 39281030 - 39280983
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  39281030 cataagttgttttcagcttatttccatatgttctccaagatagcttat 39280983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 18749823 - 18749877
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||  |||||||||||||||||||||||| ||  |||||||||||||||    
T  18749823 gttcataagcagttttcagcttatttccataagttttccgtgatagcttatgaaa 18749877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 22283754 - 22283804
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| |||||||||||||||||||||||||||||| ||| | ||||||||    
T  22283754 ataagctgttttcagcttatttccataagttctctaagatggtttatgaaa 22283804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 677
Target Start/End: Complemental strand, 28165155 - 28165105
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||| |||||||| |||||||||||||| |||| ||||||||||||    
T  28165155 gttcataagctgttttcaacttatttccataagctctccatgatagcttat 28165105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 34035981 - 34035927
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||| ||||||| |  |||||||||| ||||||||||||||    
T  34035981 gttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaa 34035927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 681
Target Start/End: Complemental strand, 7244742 - 7244690
Alignment:
Q  629 tcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||| |||||| |||| |  |||||||||||||    
T  7244742 tcataagttgttttcagcttattttcataagctctccaatatagcttatgaaa 7244690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 3468675 - 3468624
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||| || |||||||||| |||||||||| ||||| ||||||||    
T  3468675 cataagttgtttccaacttatttccacaagttctctaggatagattatgaaa 3468624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 682
Target Start/End: Original strand, 40191325 - 40191380
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaat 682  Q
    |||||||||||| ||  || |||||||||||||||||| ||||||| |||||||||    
T  40191325 gttcataagttgcttcaagattatttccataagttctccatgatagattatgaaat 40191380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 9038175 - 9038122
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| ||||||||||||||||| || |||||||| ||||||| ||||||||    
T  9038175 gttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaaa 9038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 9423600 - 9423650
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||||||||||||||||||||| | ||| |||| | ||||||||||    
T  9423600 gttcataagttgttttcagcttatttcaagaagctctccaggatagcttat 9423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 20553167 - 20553113
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||| ||||||||||||| || ||| |||| ||| |||||    
T  20553167 gttcataagttgttttcagattatttccataagctcactaggataacttgtgaaa 20553113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 677
Target Start/End: Original strand, 37064230 - 37064276
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||||||||| || |||||| |||||| |||||||||||||||||    
T  37064230 ataagttgttttaagtttattttcataagctctctatgatagcttat 37064276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 39907867 - 39907813
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| || |||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  39907867 gttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaa 39907813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 39967984 - 39967930
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||| ||||||| ||| ||||||||  ||||||||||||||    
T  39967984 gttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaa 39967930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 42281524 - 42281574
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||| |||||||||||||||||| ||||| ||||  |||||||||||||||    
T  42281524 ataatttgttttcagcttatttctataagctctcagtgatagcttatgaaa 42281574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 44822019 - 44821969
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||| ||||||| ||||||||||| |  |||||||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaa 44821969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.00000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 32059365 - 32059419
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||    
T  32059365 gttcatgagttgttttcagcttatttcgataagttctctaggatagcttatgaaa 32059419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 38104867 - 38104917
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagcttatgaaa 38104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000009
Query Start/End: Original strand, 627 - 700
Target Start/End: Original strand, 37611221 - 37611294
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaattaatttggtttgattttc 700  Q
    ||||||||| ||||||||| ||||||||||||| |||| | ||||||||||||||  |||||| ||||||||||    
T  37611221 gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaatttgatttgattttc 37611294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000009
Query Start/End: Original strand, 627 - 700
Target Start/End: Original strand, 37787951 - 37788024
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaattaatttggtttgattttc 700  Q
    ||||||||| ||||||||| ||||||||||||| |||| | ||||||||||||||  |||||| ||||||||||    
T  37787951 gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaatttgatttgattttc 37788024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 4014430 - 4014484
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||    
T  4014430 gttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaa 4014484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 680
Target Start/End: Complemental strand, 4619771 - 4619718
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaa 680  Q
    ||||||||| || ||||| ||||||||||||||||||| |||||||||||||||    
T  4619771 gttcataagctggtttcaccttatttccataagttctccatgatagcttatgaa 4619718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 7319017 - 7319068
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||| ||||||||||| ||||||||||| | ||||||||||||||    
T  7319017 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaa 7319068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 19460631 - 19460580
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    ||||||||| ||||||||||| ||||||||||| |||| |||||||||||||    
T  19460631 gttcataagatgttttcagctcatttccataagctctccatgatagcttatg 19460580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 41957460 - 41957511
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||| ||||||| ||||||||||| | ||||||||||||||    
T  41957460 cataagttgttttcatcttattttcataagttctcaaggatagcttatgaaa 41957511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 7985033 - 7984979
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||    
T  7985033 gttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaa 7984979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 18704046 - 18704096
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||| ||| | | |||||||||||||    
T  18704046 ataagttgttttcagcttatttccataagatctttgtaatagcttatgaaa 18704096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 36638811 - 36638757
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| | ||||||||||||||||||||| |||||| |||| |||||||||    
T  36638811 gttcataagcttttttcagcttatttccataagctctctaggataacttatgaaa 36638757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 681
Target Start/End: Original strand, 33533546 - 33533599
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||| |||||||||||||| |||| | |||||||| |||||    
T  33533546 ttcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaa 33533599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 573
Target Start/End: Original strand, 7705911 - 7705955
Alignment:
Q  529 agggcctctttggattgacttatttgagtatatctactggcataa 573  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||    
T  7705911 agggcctgtttggattgacttatttgagcatatctactagcataa 7705955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 665
Target Start/End: Original strand, 10280607 - 10280642
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctct 665  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10280607 cataagttgttatcagcttatttccataagttctct 10280642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 634 - 681
Target Start/End: Original strand, 12242723 - 12242770
Alignment:
Q  634 agttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||| ||||||||| |||| | ||||||||||||||    
T  12242723 agttgttttcagcttacttccataagctctccaagatagcttatgaaa 12242770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 537 - 588
Target Start/End: Complemental strand, 17369352 - 17369301
Alignment:
Q  537 tttggattgacttatttgagtatatctactggcataatcactcgtgacactg 588  Q
    |||||||||||||||||||   ||||||||| |||||||||| |||||||||    
T  17369352 tttggattgacttatttgaacttatctactgacataatcacttgtgacactg 17369301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 664
Target Start/End: Complemental strand, 1899215 - 1899181
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctc 664  Q
    ||||||||||||||||||||||||||||| |||||    
T  1899215 cataagttgttttcagcttatttccataaattctc 1899181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Complemental strand, 6740340 - 6740290
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||||| ||||||||||||||||| || || |||||||||||| ||||    
T  6740340 gttcataaggtgttttcagcttatttcaatgagctctctatgatagtttat 6740290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 12425631 - 12425581
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||| ||||||| ||||||||||| | |||||||| |||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaa 12425581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 15402835 - 15402889
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||| ||||| ||| ||||||||  |||| ||||||||    
T  15402835 gttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaa 15402889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 16889795 - 16889745
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||| ||||||||||||  ||||||  |||||||||||||    
T  16889795 ataagttgttttcagattatttccataaactctctagcatagcttatgaaa 16889745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 19138726 - 19138779
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctc--tatgatagcttatgaaa 681  Q
    ||||| |||||||||||||||||||||||| ||||  ||| |||||||||||||    
T  19138726 cataaattgttttcagcttatttccataagctctccatataatagcttatgaaa 19138779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 20028500 - 20028550
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||| ||||| |||  || |||||||||||||    
T  20028500 ataagttgttttcagcttatttctataagctcttcataatagcttatgaaa 20028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 32172705 - 32172663
Alignment:
Q  639 ttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||| ||||||  ||||||||||||||||    
T  32172705 ttttcagcttatttccattagttcttcatgatagcttatgaaa 32172663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 39105528 - 39105474
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| | |||| ||||||||| ||||||||||| | ||||||||||||||    
T  39105528 gttcataagctatttttagcttattttcataagttctccaagatagcttatgaaa 39105474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.0000000000003; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 630 - 678
Target Start/End: Original strand, 35993389 - 35993437
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  35993389 cataaattgttttcagcttattttcataagttctctatgatagcttatg 35993437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 22681191 - 22681245
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||    
T  22681191 gttcataagctgtttttagcttatttccataagttctctaggatagattatgaaa 22681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 29316781 - 29316835
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||| ||||||    
T  29316781 gttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaa 29316835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000005
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 35379022 - 35379076
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||| |||||| |||| | ||||||||||||||    
T  35379022 gttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaa 35379076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 631 - 680
Target Start/End: Complemental strand, 42458008 - 42457959
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaa 680  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  42458008 ataagttgttttcagcttattttcatatgttctctaagatagcttatgaa 42457959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000009
Query Start/End: Original strand, 529 - 573
Target Start/End: Complemental strand, 750299 - 750255
Alignment:
Q  529 agggcctctttggattgacttatttgagtatatctactggcataa 573  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  750299 agggcctatttggattgtcttatttgagtatatctactggcataa 750255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000009
Query Start/End: Original strand, 629 - 677
Target Start/End: Complemental strand, 1647298 - 1647250
Alignment:
Q  629 tcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  1647298 tcataagctgttttcagcttatttccataagctctctataatagcttat 1647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000009
Query Start/End: Original strand, 630 - 678
Target Start/End: Complemental strand, 10285921 - 10285873
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  10285921 cataagctgttttcaacttatttccataagttctctatgttagcttatg 10285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 750734 - 750680
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||| ||||||||| ||||||||||| | ||||||||||||||    
T  750734 gttcataagctgttttgagcttatttgcataagttctccaagatagcttatgaaa 750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 675
Target Start/End: Complemental strand, 5781723 - 5781685
Alignment:
Q  637 tgttttcagcttatttccataagttctctatgatagctt 675  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5781723 tgttttcagcttatttccataagctctctatgatagctt 5781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 673
Target Start/End: Original strand, 7928305 - 7928351
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagc 673  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||    
T  7928305 gttcataagttgttttcagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 11513950 - 11513908
Alignment:
Q  639 ttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  11513950 ttttcagcttatttccaaaagttctccatgatagcttatgaaa 11513908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 44443385 - 44443331
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||| |||| | |||| | ||||||||||||||    
T  44443385 gttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaa 44443331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 628 - 681
Target Start/End: Complemental strand, 16867802 - 16867749
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||| |||||||||||||| |||| | |||||||| |||||    
T  16867802 ttcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaa 16867749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 681
Target Start/End: Complemental strand, 11488339 - 11488287
Alignment:
Q  629 tcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||| |||||  |||| | ||||||||||||||    
T  11488339 tcataagttgttttcagcttatttgcataatctctccaggatagcttatgaaa 11488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 679
Target Start/End: Original strand, 29628749 - 29628801
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatga 679  Q
    |||||||| ||||||||||||||||||||||| || || | ||||||||||||    
T  29628749 gttcataaattgttttcagcttatttccataaattttccaagatagcttatga 29628801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 675
Target Start/End: Original strand, 41809251 - 41809299
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagctt 675  Q
    |||||||||||||||| |||||||||||||||| | |||| ||||||||    
T  41809251 gttcataagttgtttttagcttatttccataagctttctaagatagctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 527 - 578
Target Start/End: Complemental strand, 1830198 - 1830147
Alignment:
Q  527 ttagggcctctttggattgacttatttgagtatatctactggcataatcact 578  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||| ||||    
T  1830198 ttagggcctgtttggattgacttatttgagtttatttactgacataagcact 1830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 34652045 - 34652096
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| |||||||| |||||||||||||| |||| | ||||||||||||||    
T  34652045 cataagctgttttcaacttatttccataagctctccaagatagcttatgaaa 34652096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 36415682 - 36415733
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||| ||||||| | ||||||||  ||||||||||||||||    
T  36415682 cataagttgttttcatcttattttcgtaagttctacatgatagcttatgaaa 36415733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 42131678 - 42131627
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| || ||| ||||||||||| ||||||||| ||||||||||||||||    
T  42131678 cataagctgctttaagcttatttccttaagttctccatgatagcttatgaaa 42131627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 1625964 - 1625910
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| ||||||||||| |||| | ||||||||| | ||||||||||||||    
T  1625964 gttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaa 1625910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 8017498 - 8017444
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| |||||||| || ||||| ||||||||||| | ||||||||||||||    
T  8017498 gttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaa 8017444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 9174879 - 9174825
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| | |||||||||||||| |||||| ||| || ||||||||||||||    
T  9174879 gttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaa 9174825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 573
Target Start/End: Original strand, 15370238 - 15370280
Alignment:
Q  531 ggcctctttggattgacttatttgagtatatctactggcataa 573  Q
    ||||| ||||||||||||||||||||  |||||||||||||||    
T  15370238 ggcctgtttggattgacttatttgagcttatctactggcataa 15370280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 28039338 - 28039392
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||||||||||||||||| || || | || |||||||||||    
T  28039338 gttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaa 28039392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 688
Target Start/End: Original strand, 30552661 - 30552711
Alignment:
Q  638 gttttcagcttatttccataagttctctatgatagcttatgaaattaattt 688  Q
    ||||| |||||||||||||||| |||||| ||||| |||||||| ||||||    
T  30552661 gtttttagcttatttccataagctctctaggatagtttatgaaaataattt 30552711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 33942214 - 33942160
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| ||||||||||| |||| ||| || |||||||||| ||||||||||    
T  33942214 gttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaa 33942160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 38078416 - 38078470
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||| |||| |||| |||||| |||| | ||||||||||||||    
T  38078416 gttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaa 38078470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 575
Target Start/End: Original strand, 40059382 - 40059420
Alignment:
Q  537 tttggattgacttatttgagtatatctactggcataatc 575  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  40059382 tttggattgacttatttgagtttatctactgacataatc 40059420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 575
Target Start/End: Original strand, 40085282 - 40085320
Alignment:
Q  537 tttggattgacttatttgagtatatctactggcataatc 575  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  40085282 tttggattgacttatttgagtttatctactgacataatc 40085320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 40682401 - 40682454
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||| ||||||| ||||||||||| | |||| |||||||||    
T  40682401 gttcataagttgttttcaacttattttcataagttctc-aagatatcttatgaaa 40682454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 41407668 - 41407615
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||  |||||||||| | ||||||| ||||||    
T  41407668 gttcataagttgttttcagcttatttttataagttctcca-gatagctgatgaaa 41407615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 41817228 - 41817178
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||| |||||||||||||||||||||||| |||| | ||||| ||||||||    
T  41817228 ataatttgttttcagcttatttccataagctctccaggatagtttatgaaa 41817178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 42420061 - 42420007
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| |||||||||||| ||||||||||| | || | ||||||||||||||    
T  42420061 gttcataaattgttttcagctcatttccataagctatccaggatagcttatgaaa 42420007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 681
Target Start/End: Complemental strand, 45229563 - 45229521
Alignment:
Q  639 ttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||| ||||||||||| | ||||||||||||||    
T  45229563 ttttcagcttattttcataagttctcgaagatagcttatgaaa 45229521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.00000000002; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 631 - 680
Target Start/End: Original strand, 281858 - 281907
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaa 680  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||    
T  281858 ataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 4420707 - 4420653
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| ||||||||||||||||||||||| |||| | ||||||||| ||||    
T  4420707 gttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaa 4420653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 6647451 - 6647397
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| |||||||| ||||||| |||||| |||||| ||||||||||||||    
T  6647451 gttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaa 6647397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 20512654 - 20512704
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||| |||  || |||||||||||||    
T  20512654 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 20512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 7931800 - 7931849
Alignment:
Q  632 taagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||| ||| || |||||||| |||||    
T  7931800 taagttgttttcagcttatttccataagctctataggatagcttgtgaaa 7931849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 681
Target Start/End: Original strand, 835265 - 835309
Alignment:
Q  637 tgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||| ||||||||||| | ||||||||||||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaa 835309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 678
Target Start/End: Original strand, 1408272 - 1408324
Alignment:
Q  626 agttcataagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    |||| |||| |||||||||||||||||||||||| ||| ||||||| ||||||    
T  1408272 agttaataacttgttttcagcttatttccataagctctatatgataacttatg 1408324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 6537011 - 6536979
Alignment:
Q  627 gttcataagttgttttcagcttatttccataag 659  Q
    |||||||||||||||||||||||||||||||||    
T  6537011 gttcataagttgttttcagcttatttccataag 6536979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 2460867 - 2460902
Alignment:
Q  537 tttggattgacttatttgagtatatctactggcata 572  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2460867 tttggattgacttatttgagtatatttactggcata 2460902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 1401169 - 1401119
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||| ||||| ||||||||| |||||||| |||| ||||||||||||||||    
T  1401169 ataacttgttctcagcttatctccataagctctccatgatagcttatgaaa 1401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 680
Target Start/End: Original strand, 3201956 - 3202006
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaa 680  Q
    |||||||||||||||||||||| ||||| ||| || | |||||||||||||    
T  3201956 cataagttgttttcagcttattcccatatgttatccaagatagcttatgaa 3202006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 661
Target Start/End: Original strand, 3217200 - 3217230
Alignment:
Q  631 ataagttgttttcagcttatttccataagtt 661  Q
    |||||||||||||||||||||||||||||||    
T  3217200 ataagttgttttcagcttatttccataagtt 3217230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 7931732 - 7931786
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||| ||||||||||||||||||||||| |||| ||| || |||||||| |||||    
T  7931732 gttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaa 7931786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 17241258 - 17241312
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||| |||||||||||||  |||| | ||||||| ||||||    
T  17241258 gttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaa 17241312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 664
Target Start/End: Original strand, 27909647 - 27909681
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctc 664  Q
    |||||||||||||||||||||||||||||| ||||    
T  27909647 cataagttgttttcagcttatttccataagctctc 27909681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 635 - 681
Target Start/End: Original strand, 28088236 - 28088282
Alignment:
Q  635 gttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||| ||||||||||||| || |||| ||||||||||||||||    
T  28088236 gttgttttgagcttatttccatgagctctccatgatagcttatgaaa 28088282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 680
Target Start/End: Complemental strand, 34939805 - 34939755
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaa 680  Q
    ||||| |||||||||||||||||||||||  |||| | |||||||||||||    
T  34939805 cataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000009; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000009
Query Start/End: Original strand, 637 - 681
Target Start/End: Complemental strand, 31006072 - 31006028
Alignment:
Q  637 tgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||| |||||| |||||||||||||||||||    
T  31006072 tgttttcagcttatttccgtaagttatctatgatagcttatgaaa 31006028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000009
Query Start/End: Original strand, 629 - 681
Target Start/End: Complemental strand, 46110265 - 46110213
Alignment:
Q  629 tcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||| ||||| |||| || |||||||||||||    
T  46110265 tcataagttgttttcagcttatttctataagctctcaatcatagcttatgaaa 46110213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 666
Target Start/End: Original strand, 8469383 - 8469422
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctcta 666  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  8469383 gttcataagttgttttcagcttatttccataggttctcta 8469422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 53673667 - 53673718
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||| |||||| |||| | ||||||||||||||    
T  53673667 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaa 53673718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 1137776 - 1137722
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||| ||||||||||||| |||||  ||||| ||||||||    
T  1137776 gttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaa 1137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 7694016 - 7694070
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||||||  |||| | |||| |||||||||    
T  7694016 gttcataagttgttttcagcttatttccataaactctccaggataacttatgaaa 7694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 29263434 - 29263380
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||| ||| |||  | ||||||||||||||    
T  29263434 gttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaa 29263380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 31038873 - 31038923
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||||||||||||||| |||||||| ||||||||||||| | |||||||    
T  31038873 gttcataagttgttttcaacttatttctataagttctctattagagcttat 31038923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 675
Target Start/End: Original strand, 5131259 - 5131304
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagctt 675  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||    
T  5131259 cataagttgttttcagcttatttccataagctctccaggatagctt 5131304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000005
Query Start/End: Original strand, 529 - 574
Target Start/End: Original strand, 55414326 - 55414371
Alignment:
Q  529 agggcctctttggattgacttatttgagtatatctactggcataat 574  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||||    
T  55414326 agggcctgtttggattgacttatttgagagtatctactggcataat 55414371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 681
Target Start/End: Original strand, 11158373 - 11158417
Alignment:
Q  637 tgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||    
T  11158373 tgttttcagcttatttccacaagctctctaagatagcttatgaaa 11158417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 633 - 681
Target Start/End: Original strand, 18628555 - 18628603
Alignment:
Q  633 aagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||| |||| | |||| |||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaa 18628603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 681
Target Start/End: Complemental strand, 22666551 - 22666499
Alignment:
Q  629 tcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||| |||||||||| |||||||  ||||||||||| ||||||||||||||||    
T  22666551 tcatgagttgttttctgcttattgtcataagttctccatgatagcttatgaaa 22666499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 681
Target Start/End: Original strand, 29601024 - 29601068
Alignment:
Q  637 tgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||    
T  29601024 tgttttcagcttattttcataagttctctaggatagcatatgaaa 29601068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 659
Target Start/End: Complemental strand, 43824347 - 43824315
Alignment:
Q  627 gttcataagttgttttcagcttatttccataag 659  Q
    |||||||||||||||||||||||||||||||||    
T  43824347 gttcataagttgttttcagcttatttccataag 43824315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 677
Target Start/End: Complemental strand, 19429770 - 19429723
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||| ||||||||||||||||||||||| |||| | ||||||||||    
T  19429770 cataagctgttttcagcttatttccataagctctccaggatagcttat 19429723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 629 - 680
Target Start/End: Complemental strand, 22662072 - 22662021
Alignment:
Q  629 tcataagttgttttcagcttatttccataagttctctatgatagcttatgaa 680  Q
    |||| |||||||||| |||||||  ||||||||||| |||||||||||||||    
T  22662072 tcatgagttgttttctgcttattgtcataagttctccatgatagcttatgaa 22662021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 666
Target Start/End: Complemental strand, 24929557 - 24929518
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctcta 666  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  24929557 gttcataaattgttttcagcttatttccataagctctcta 24929518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 663
Target Start/End: Complemental strand, 25332838 - 25332803
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttct 663  Q
    ||||||||||||||||||||||||| ||||||||||    
T  25332838 ttcataagttgttttcagcttattttcataagttct 25332803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 537 - 572
Target Start/End: Original strand, 27124068 - 27124103
Alignment:
Q  537 tttggattgacttatttgagtatatctactggcata 572  Q
    ||||||||||||||||||||||||| ||||||||||    
T  27124068 tttggattgacttatttgagtatatttactggcata 27124103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 677
Target Start/End: Original strand, 28614817 - 28614864
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttat 677  Q
    |||||| | |||||||||||||| ||||||||||||| ||||||||||    
T  28614817 cataagctcttttcagcttattttcataagttctctaggatagcttat 28614864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Original strand, 34398694 - 34398745
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||| ||||| ||||||||| |||| ||||| ||||||||||    
T  34398694 cataagttgttttcggcttacttccataagctctccatgatggcttatgaaa 34398745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 628 - 675
Target Start/End: Original strand, 41603418 - 41603465
Alignment:
Q  628 ttcataagttgttttcagcttatttccataagttctctatgatagctt 675  Q
    |||||||| | |||||||||||||||||||||| ||| ||||||||||    
T  41603418 ttcataagctattttcagcttatttccataagtgctccatgatagctt 41603465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 49219200 - 49219149
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||||||||||||||||||||||||||  ||| || ||||| ||||||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaa 49219149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 6364209 - 6364159
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| |||||||||||||||| | ||||||||| || |||||||||||||    
T  6364209 ataagctgttttcagcttattttcgtaagttctccattatagcttatgaaa 6364159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 573
Target Start/End: Original strand, 7367965 - 7368011
Alignment:
Q  527 ttagggcctctttggattgacttatttgagtatatctactggcataa 573  Q
    |||||| || ||||||||||||||||||||| ||||||| |||||||    
T  7367965 ttagggtctgtttggattgacttatttgagtttatctacaggcataa 7368011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 678
Target Start/End: Complemental strand, 14011293 - 14011247
Alignment:
Q  632 taagttgttttcagcttatttccataagttctctatgatagcttatg 678  Q
    |||| ||||||||||||||||||||||| |||| | |||||||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttatg 14011247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Complemental strand, 17884132 - 17884078
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||| |||| |||||| |||| |  |||||||||||||    
T  17884132 gttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaa 17884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 588
Target Start/End: Original strand, 22662165 - 22662223
Alignment:
Q  530 gggcctctttggattgacttatttgagtatatctactggcataatcactcgtgacactg 588  Q
    |||||| ||||||||||||||||||||| ||||||||  ||||| ||||| | ||||||    
T  22662165 gggcctgtttggattgacttatttgagtttatctactaacataagcactcataacactg 22662223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 588
Target Start/End: Original strand, 22666644 - 22666702
Alignment:
Q  530 gggcctctttggattgacttatttgagtatatctactggcataatcactcgtgacactg 588  Q
    |||||| ||||||||||||||||||||| ||||||||  ||||| ||||| | ||||||    
T  22666644 gggcctgtttggattgacttatttgagtttatctactaacataagcactcataacactg 22666702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 573
Target Start/End: Complemental strand, 25571418 - 25571372
Alignment:
Q  527 ttagggcctctttggattgacttatttgagtatatctactggcataa 573  Q
    ||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  25571418 ttagggcctgtttggattggcttatttgagtttatctactgacataa 25571372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 35064915 - 35064865
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||| |||||||||||||||||||||||  |||| |||||| |||||||||    
T  35064915 ataaattgttttcagcttatttccataaactctccatgatatcttatgaaa 35064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 578
Target Start/End: Complemental strand, 38478866 - 38478820
Alignment:
Q  532 gcctctttggattgacttatttgagtatatctactggcataatcact 578  Q
    |||| ||||||||| |||||||||| |||||||||||||||| ||||    
T  38478866 gcctgtttggattggcttatttgagcatatctactggcataagcact 38478820  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 684
Target Start/End: Complemental strand, 45927410 - 45927356
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaatta 684  Q
    |||||| ||||||||||||||||||||||  |||| || ||||||| ||||||||    
T  45927410 cataagctgttttcagcttatttccataaactctccataatagcttctgaaatta 45927356  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 50800040 - 50800089
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  50800040 ataagctgttttcagcttatttcca-aagttctccatgatagcttaagaaa 50800089  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 55084487 - 55084541
Alignment:
Q  627 gttcataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||| || ||||||||||||| |||||| |||||| ||||||| ||||||    
T  55084487 gttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaa 55084541  T

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Target: scaffold0159 (Bit Score: 35; Significance: 0.000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 675
Target Start/End: Complemental strand, 27055 - 27017
Alignment:
Q  637 tgttttcagcttatttccataagttctctatgatagctt 675  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  27055 tgttttcagcttatttccataagctctctatgatagctt 27017  T

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Target: scaffold0089 (Bit Score: 35; Significance: 0.000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 33637 - 33687
Alignment:
Q  631 ataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    ||||||||||||||||||||||||||||| |||  || |||||||||||||    
T  33637 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 33687  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 681
Target Start/End: Complemental strand, 306387 - 306336
Alignment:
Q  630 cataagttgttttcagcttatttccataagttctctatgatagcttatgaaa 681  Q
    |||||| ||||||||||||| || |||||| |||||| ||||||||||||||    
T  306387 cataagctgttttcagcttacttacataagctctctaggatagcttatgaaa 306336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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