View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3107_low_73 (Length: 247)
Name: NF3107_low_73
Description: NF3107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3107_low_73 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 47254041 - 47254280
Alignment:
| Q |
1 |
aacatttccatggtgagaaaccaaattgccacggaagcttgattttggagcttctttaaattacagtaaaagagccataaacgtgcgtttggtgacggaa |
100 |
Q |
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| T |
47254041 |
aacatttccgtggtgaaaaaccacattgccacagaagcttgattttggagcttctttaaattgcagtaaaagagccataaacgtgcgtttggtgacggaa |
47254140 |
T |
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| Q |
101 |
attaaacgcacaactaaccacatactaagtttcatgtagttgagttaaacaggaaaatcttgagatgtcctatttcttagaaaaagcaagagatgattaa |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47254141 |
attaaacgcacaactaaacacatactaagtttcatgtagttgagttaaacaggaaaatcttgagatgtcctatttcttagaaaaagcaagagatgattaa |
47254240 |
T |
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| Q |
201 |
cctcacatgaaatttattgaaattggcaggagtatctgtg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
47254241 |
cctcacatgaaatttattgaaattggcaggagtatctgtg |
47254280 |
T |
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