View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3109_low_4 (Length: 343)

Name: NF3109_low_4
Description: NF3109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3109_low_4
NF3109_low_4
[»] scaffold0012 (1 HSPs)
scaffold0012 (42-232)||(207992-208183)
[»] chr8 (24 HSPs)
chr8 (42-231)||(30426625-30426815)
chr8 (42-232)||(28069648-28069839)
chr8 (42-223)||(41511191-41511373)
chr8 (46-231)||(36991289-36991475)
chr8 (62-231)||(40695204-40695373)
chr8 (46-231)||(10672470-10672654)
chr8 (42-236)||(10652568-10652764)
chr8 (42-228)||(44859128-44859313)
chr8 (42-195)||(24101945-24102099)
chr8 (170-233)||(5033310-5033373)
chr8 (103-226)||(6014185-6014309)
chr8 (78-231)||(45113235-45113390)
chr8 (139-233)||(37966398-37966491)
chr8 (41-234)||(28318849-28319049)
chr8 (40-150)||(27490043-27490154)
chr8 (154-196)||(12177572-12177614)
chr8 (154-196)||(12422000-12422042)
chr8 (103-192)||(26749543-26749632)
chr8 (103-179)||(6399915-6399991)
chr8 (192-231)||(8412695-8412734)
chr8 (115-182)||(34612567-34612634)
chr8 (136-178)||(5033108-5033150)
chr8 (102-224)||(42761703-42761825)
chr8 (136-192)||(17867654-17867711)
[»] chr5 (28 HSPs)
chr5 (42-232)||(13032048-13032238)
chr5 (42-232)||(37266660-37266851)
chr5 (42-231)||(35660565-35660755)
chr5 (42-228)||(11775721-11775909)
chr5 (42-231)||(18625377-18625567)
chr5 (42-231)||(32129573-32129763)
chr5 (42-231)||(39902344-39902534)
chr5 (40-232)||(14349731-14349923)
chr5 (42-232)||(40753117-40753308)
chr5 (62-223)||(4895699-4895861)
chr5 (45-231)||(34827126-34827311)
chr5 (42-215)||(8440943-8441117)
chr5 (40-207)||(3057135-3057302)
chr5 (157-229)||(43309153-43309225)
chr5 (133-224)||(18653382-18653472)
chr5 (46-126)||(1475699-1475780)
chr5 (42-170)||(4592730-4592858)
chr5 (115-231)||(3057419-3057534)
chr5 (157-231)||(29341040-29341113)
chr5 (103-192)||(36290593-36290682)
chr5 (119-191)||(27428877-27428949)
chr5 (115-225)||(3440840-3440952)
chr5 (103-182)||(17247397-17247476)
chr5 (156-226)||(32793418-32793487)
chr5 (159-204)||(1475638-1475683)
chr5 (167-224)||(9460599-9460655)
chr5 (62-107)||(43309067-43309112)
chr5 (160-192)||(41660154-41660186)
[»] chr4 (41 HSPs)
chr4 (42-233)||(56558208-56558400)
chr4 (42-230)||(34778350-34778539)
chr4 (42-231)||(18206996-18207186)
chr4 (42-231)||(19901874-19902064)
chr4 (49-237)||(3952120-3952309)
chr4 (42-231)||(23610571-23610761)
chr4 (64-231)||(39862468-39862636)
chr4 (42-231)||(33247086-33247274)
chr4 (42-234)||(38079673-38079866)
chr4 (42-233)||(5763116-5763308)
chr4 (42-231)||(5416422-5416613)
chr4 (80-219)||(30567868-30568008)
chr4 (105-231)||(12312431-12312558)
chr4 (42-231)||(33262508-33262698)
chr4 (42-231)||(24073546-24073735)
chr4 (42-231)||(12153100-12153273)
chr4 (160-231)||(52018811-52018882)
chr4 (62-226)||(47922327-47922493)
chr4 (163-231)||(33524313-33524381)
chr4 (42-124)||(52018712-52018795)
chr4 (46-151)||(12241444-12241550)
chr4 (115-224)||(1871280-1871388)
chr4 (42-231)||(47922035-47922221)
chr4 (109-192)||(36688183-36688266)
chr4 (154-232)||(23474153-23474230)
chr4 (115-204)||(26428971-26429061)
chr4 (43-126)||(17080701-17080785)
chr4 (115-222)||(34927488-34927596)
chr4 (103-191)||(56453816-56453904)
chr4 (103-192)||(5524438-5524527)
chr4 (115-192)||(56269071-56269148)
chr4 (115-231)||(48914475-48914590)
chr4 (116-224)||(13493276-13493385)
chr4 (161-224)||(33841768-33841830)
chr4 (42-119)||(12312571-12312649)
chr4 (160-226)||(36532673-36532738)
chr4 (194-224)||(49811508-49811538)
chr4 (136-192)||(17493026-17493083)
chr4 (103-192)||(37002246-37002335)
chr4 (103-192)||(42010108-42010197)
chr4 (160-192)||(5361474-5361506)
[»] chr7 (26 HSPs)
chr7 (42-232)||(16366447-16366638)
chr7 (40-231)||(7362495-7362686)
chr7 (42-231)||(21151081-21151271)
chr7 (42-234)||(18198185-18198378)
chr7 (42-230)||(45260384-45260573)
chr7 (42-232)||(44647894-44648084)
chr7 (42-231)||(9559010-9559200)
chr7 (42-239)||(12139257-12139454)
chr7 (46-232)||(4888400-4888587)
chr7 (42-228)||(47226035-47226219)
chr7 (42-223)||(25084690-25084874)
chr7 (78-232)||(33450471-33450627)
chr7 (87-231)||(39855770-39855914)
chr7 (115-235)||(47500234-47500355)
chr7 (137-223)||(989154-989239)
chr7 (154-228)||(47271107-47271180)
chr7 (115-223)||(34985909-34986018)
chr7 (103-192)||(47799895-47799984)
chr7 (162-219)||(33608845-33608901)
chr7 (136-185)||(19027685-19027735)
chr7 (136-185)||(20726901-20726951)
chr7 (138-192)||(28528577-28528631)
chr7 (136-192)||(14696752-14696809)
chr7 (103-192)||(19889029-19889118)
chr7 (111-191)||(32915955-32916035)
chr7 (160-192)||(35737161-35737193)
[»] chr6 (28 HSPs)
chr6 (42-233)||(4804377-4804569)
chr6 (62-232)||(17944111-17944282)
chr6 (62-231)||(7162033-7162203)
chr6 (62-231)||(12412586-12412756)
chr6 (62-232)||(21159324-21159495)
chr6 (42-230)||(1249105-1249292)
chr6 (85-231)||(13089705-13089852)
chr6 (154-231)||(32737899-32737976)
chr6 (62-228)||(227522-227690)
chr6 (42-228)||(27826467-27826654)
chr6 (154-231)||(1516163-1516239)
chr6 (154-231)||(1518252-1518328)
chr6 (42-169)||(29698092-29698220)
chr6 (102-223)||(7215816-7215937)
chr6 (103-192)||(24484870-24484959)
chr6 (163-219)||(30460875-30460930)
chr6 (154-231)||(13888478-13888556)
chr6 (154-231)||(1515498-1515574)
chr6 (42-126)||(32737803-32737888)
chr6 (103-192)||(2142288-2142377)
chr6 (162-219)||(28696624-28696680)
chr6 (157-224)||(2800574-2800641)
chr6 (157-231)||(17828525-17828598)
chr6 (62-123)||(30460769-30460831)
chr6 (115-185)||(32254033-32254103)
chr6 (136-192)||(7545661-7545718)
chr6 (198-230)||(3177061-3177093)
chr6 (167-223)||(29229149-29229204)
[»] chr2 (30 HSPs)
chr2 (42-231)||(35316754-35316944)
chr2 (42-231)||(28564820-28565011)
chr2 (42-228)||(13238610-13238797)
chr2 (232-333)||(21733469-21733570)
chr2 (62-232)||(23259442-23259613)
chr2 (156-231)||(11864913-11864988)
chr2 (160-231)||(45625035-45625106)
chr2 (154-231)||(2063396-2063472)
chr2 (102-223)||(4446860-4446981)
chr2 (42-126)||(39465704-39465789)
chr2 (154-225)||(40640711-40640783)
chr2 (191-234)||(32009928-32009971)
chr2 (103-192)||(374984-375073)
chr2 (115-192)||(8988858-8988935)
chr2 (42-126)||(41983401-41983485)
chr2 (146-233)||(19908814-19908899)
chr2 (157-224)||(30857642-30857708)
chr2 (164-231)||(38824078-38824145)
chr2 (158-224)||(22061433-22061498)
chr2 (133-231)||(35315523-35315620)
chr2 (78-126)||(374499-374548)
chr2 (103-192)||(23459841-23459930)
chr2 (159-220)||(36929763-36929823)
chr2 (163-231)||(36758818-36758885)
chr2 (232-274)||(36259207-36259249)
chr2 (136-192)||(13780522-13780579)
chr2 (103-224)||(31618732-31618851)
chr2 (103-207)||(21454476-21454578)
chr2 (199-231)||(32444384-32444416)
chr2 (174-226)||(36758675-36758726)
[»] chr3 (27 HSPs)
chr3 (40-231)||(43719903-43720095)
chr3 (48-231)||(19830387-19830572)
chr3 (62-231)||(27033600-27033770)
chr3 (46-231)||(2229916-2230102)
chr3 (62-231)||(34373780-34373950)
chr3 (42-229)||(40851702-40851891)
chr3 (136-231)||(24754681-24754776)
chr3 (136-231)||(24763678-24763773)
chr3 (42-228)||(46167322-46167509)
chr3 (42-213)||(34373559-34373731)
chr3 (232-312)||(3671678-3671756)
chr3 (115-231)||(48084822-48084939)
chr3 (42-207)||(12402894-12403061)
chr3 (179-231)||(24647905-24647957)
chr3 (42-214)||(550790-550962)
chr3 (63-215)||(566746-566898)
chr3 (103-192)||(31523663-31523752)
chr3 (133-225)||(28229365-28229456)
chr3 (149-231)||(29586373-29586454)
chr3 (103-192)||(42613071-42613160)
chr3 (103-192)||(49679265-49679354)
chr3 (157-224)||(10474402-10474468)
chr3 (157-231)||(33632867-33632940)
chr3 (157-215)||(44637987-44638044)
chr3 (116-226)||(51982547-51982656)
chr3 (163-231)||(3009272-3009339)
chr3 (115-179)||(33979937-33980001)
[»] chr1 (25 HSPs)
chr1 (42-231)||(50484315-50484505)
chr1 (45-231)||(12151699-12151886)
chr1 (42-232)||(50294018-50294209)
chr1 (42-232)||(48327109-48327300)
chr1 (157-233)||(12380831-12380907)
chr1 (157-233)||(12384898-12384974)
chr1 (46-227)||(40328209-40328390)
chr1 (154-231)||(45978047-45978124)
chr1 (63-231)||(23861908-23862081)
chr1 (42-173)||(12380924-12381056)
chr1 (42-173)||(12384991-12385123)
chr1 (156-231)||(7840635-7840710)
chr1 (154-231)||(18976260-18976338)
chr1 (42-126)||(7841771-7841856)
chr1 (103-192)||(30077639-30077728)
chr1 (232-293)||(6613490-6613551)
chr1 (102-219)||(39426200-39426317)
chr1 (154-230)||(32361264-32361340)
chr1 (164-231)||(1228496-1228563)
chr1 (42-122)||(45977951-45978032)
chr1 (162-230)||(30860726-30860794)
chr1 (111-182)||(24977239-24977310)
chr1 (103-181)||(26860056-26860134)
chr1 (103-192)||(52280034-52280123)
chr1 (103-192)||(46045678-46045767)
[»] scaffold0035 (1 HSPs)
scaffold0035 (42-237)||(16347-16543)
[»] scaffold0250 (1 HSPs)
scaffold0250 (42-231)||(7076-7270)
[»] scaffold0008 (1 HSPs)
scaffold0008 (42-237)||(9151-9344)
[»] scaffold0126 (1 HSPs)
scaffold0126 (40-231)||(22399-22590)
[»] scaffold0009 (1 HSPs)
scaffold0009 (64-226)||(6396-6559)
[»] scaffold0006 (1 HSPs)
scaffold0006 (42-227)||(73817-73986)
[»] scaffold0456 (2 HSPs)
scaffold0456 (154-231)||(13721-13799)
scaffold0456 (62-126)||(13645-13710)
[»] scaffold0171 (1 HSPs)
scaffold0171 (103-182)||(17311-17390)
[»] scaffold0664 (1 HSPs)
scaffold0664 (136-192)||(4695-4752)


Alignment Details
Target: scaffold0012 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 207992 - 208183
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||| ||||| || |||||||||||||||| |||  || |||||    
T  207992 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggacccactt 208091  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  208092 agtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 208183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 30426815 - 30426625
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| ||| |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  30426815 tctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 30426716  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  30426715 agtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttcaccc 30426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 28069648 - 28069839
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| |||  |||||||| || || ||||||||| ||||||||| ||||||||||  | ||||||||||||||||  ||  || |||||    
T  28069648 tctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccactt 28069747  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||| ||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  28069748 agtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacccc 28069839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 41511191 - 41511373
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| ||| |||||||||||| || ||||||||||||||||||| |||||||||| || ||||||||||||||||  || ||  |||||    
T  41511191 tctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaaaccactt 41511290  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggat 223  Q
    |||||||||||  || ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  41511291 agtgataggacccactatctattttttatatctatctctttccaacttgcaaaactccatttattttgttaaacggagaggat 41511373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 36991289 - 36991475
Alignment:
Q  46 catttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtg 144  Q
    ||||||||||| | | |||||||||||| || ||||||||| |||| |||| |||||||||| || ||||||||||||||||  ||  || |||||||||    
T  36991289 catttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatggtgggacccacttagtg 36991388  T
Q  145 ataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
     ||||||  | ||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36991389 gtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 36991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 40695373 - 40695204
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| || || |||||| | ||||||| |||||||||| || |||||||| |||||||  || ||||||||||||| |||||| ||||||||    
T  40695373 catttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggtggaactcacttagtggtaggacctaccatct 40695274  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||| |||||||||||    
T  40695273 attttttgtgtctatctctctccaactt-ccaaactccatttattttgctaaatggagaagatcttcaccc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 10672654 - 10672470
Alignment:
Q  46 catttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcacttagtg 144  Q
    ||||||||||| | | ||||| |||||| || ||||||||||| ||||||| | || |||| | | ||||||||||||||||  ||  ||||||||||||    
T  10672654 catttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatggtgggactcacttagtg 10672555  T
Q  145 ataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
     |||||   |||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  10672554 gtaggatccaccatctattttttgtgtctatctctc--caacttgcaaaactccatttattttgccaaatggagagaatcttcaccc 10672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 236
Target Start/End: Complemental strand, 10652764 - 10652568
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaagtg---aaatataattaatgataatgtaactcac 138  Q
    ||||||||||||||| | | |||||||||||| || |||||||||| |||||||| | ||||||||  |   ||||||||||||||||  ||  || ||     
T  10652764 tctccatttatgtgtttcttcatttcttcaatttggagagataaaa-cacataaaattttgaaaaaaagtaaaaatataattaatgatggtgggacccaa 10652666  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccccttat 236  Q
    |||||  || |||  |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  10652665 ttagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatcttcaccccttat 10652568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 44859313 - 44859128
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacat-aaattcttgaaaaagtgaaatataattaatgataatgtaactcactt 140  Q
    |||||||||| |||| ||| | |||||| ||| || ||||||||| |||| | ||||| || ||||| | ||||||||||||||||  ||  || |||||    
T  44859313 tctccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatggtgggacccactt 44859214  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
    |||| ||| ||  ||||||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  44859213 agtggtagaacccaccatctatttttagt--ctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatcttca 44859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 24101945 - 24102099
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| |||  |||| || ||| || ||||||||| |||| |||| ||||||||||  ||||||||||||||||||  || |||||||||    
T  24101945 tctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaactcactt 24102044  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaac 195  Q
    |||| |||||   |||||||||||||| |||||||||||||  ||||||||||||    
T  24102045 agtggtaggatccaccatctattttttatgtctatctctcttaaacttgcaaaac 24102099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 5033310 - 5033373
Alignment:
Q  170 gtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcacccct 5033373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 6014185 - 6014309
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatt 201  Q
    ||||||| ||| |||||||||||||||   |  |||||| || |||||| || |||||||| |||||||||||||| ||||||| ||||||||||| |||    
T  6014185 aaaaagtaaaacataattaatgataataggatccacttaatggtaggacctatcatctattcttttgtgtctatctttctccaaattgcaaaactctatt 6014284  T
Q  202 tattttgtcaaatggagaggatctt 226  Q
    ||||||  |||||||||||||||||    
T  6014285 tattttagcaaatggagaggatctt 6014309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 45113235 - 45113390
Alignment:
Q  78 agagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctat 175  Q
    ||||||| | ||||||||| | ||||||||  | ||| |||||||||||| |||  || ||||||||| | ||||  |||||||||| ||||||||||||    
T  45113235 agagatatagacacataaaattttgaaaaaaataaaaaataattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtgtctat 45113334  T
Q  176 ctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
     ||||||||| ||||||||| | |||||||||  ||||||||||||||||| ||||    
T  45113335 gtctctccaaattgcaaaacacaatttattttagcaaatggagaggatcttaaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 37966491 - 37966398
Alignment:
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    |||||| |||||| ||| ||||||||||||||| ||||||||| ||| |||| ||| ||||||||||||| ||||||||||||||||| ||||||    
T  37966491 ttagtggtaggacctacaatctattttttgtgtttatctctcttcaaattgc-aaattccatttattttgccaaatggagaggatcttaacccct 37966398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 234
Target Start/End: Complemental strand, 28319049 - 28318849
Alignment:
Q  41 ttctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcact 139  Q
    ||||||||||| |||| | | |||||||||||| || ||||| ||| ||||||||| | || ||||| || ||||||||||||||||  |   || ||||    
T  28319049 ttctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatggttggacccact 28318950  T
Q  140 tagtgataggacttaccatct------attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    ||||| ||||||  || ||||      ||||||| ||| |||||||||| ||||||||||||||||||||||||  |||||  ||| ||||||||| |||    
T  28318949 tagtggtaggacccactatctttttttattttttttgtatatctctctcaaacttgcaaaactccatttattttaccaaataaagaagatcttcactcct 28318850  T
Q  234 t 234  Q
    |    
T  28318849 t 28318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 27490154 - 27490043
Alignment:
Q  40 cttctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcac 138  Q
    ||||||||||||||| | | |  |||||||| || || ||||| ||||| ||||||| |||||||||| || ||||||||||||||||| |   ||||||    
T  27490154 cttctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgatatttagactcac 27490055  T
Q  139 ttagtgatagga 150  Q
    ||||||||||||    
T  27490054 ttagtgatagga 27490043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 12177614 - 12177572
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaact 196  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  12177614 accatctattttttgtatctatctctctccaacttgcaaaact 12177572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 12422042 - 12422000
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaact 196  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  12422042 accatctattttttgtatctatctctctccaacttgcaaaact 12422000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 26749632 - 26749543
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || ||||||||||||||||  | ||  |||||||||||||||||||||||||| ||||||    
T  26749632 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 26749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 6399915 - 6399991
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctct 179  Q
    ||||||| ||| ||||||||||||||||  |  ||||| || ||| |||  ||||||||||||||||||||||||||    
T  6399915 aaaaagtaaaaaataattaatgataatgggatccacttggtaataagacccaccatctattttttgtgtctatctct 6399991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 8412695 - 8412734
Alignment:
Q  192 aaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  8412695 aaactccatttattttgtcaaatgaagaggatcttaaccc 8412734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 34612567 - 34612634
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctc 182  Q
    ||||||||||||  ||  || ||||||||||||||||  ||||  |||||||||||||||||||||||    
T  34612567 ataattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctc 34612634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 5033108 - 5033150
Alignment:
Q  136 cacttagtgataggacttaccatctattttttgtgtctatctc 178  Q
    ||||||||| ||||||  |||||||||||||||||||||||||    
T  5033108 cacttagtggtaggacccaccatctattttttgtgtctatctc 5033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 42761703 - 42761825
Alignment:
Q  102 gaaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatt 201  Q
    |||||| | ||| |||||||||||| ||| ||| |||| |||| |||||   || ||||||||| ||||||||||||||| ||| ||||  |  ||||||    
T  42761703 gaaaaattaaaaaataattaatgatgatggaacccactgagtggtaggatccactatctattttatgtgtctatctctcttcaaattgcgtacttccatt 42761802  T
Q  202 tattttgtcaaatggagaggatc 224  Q
    |||||| | || || ||||||||    
T  42761803 tattttattaagtgaagaggatc 42761825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 17867711 - 17867654
Alignment:
Q  136 cacttagtgataggacttaccatctatttttt-gtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||||||  ||||  |||||||| |||||||||||||||||| ||||||    
T  17867711 cacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17867654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 13032048 - 13032238
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaagtgaaatataattaatgataatgtaactcactta 141  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||| ||||| | ||||||||||||||||  ||  || || |||    
T  13032048 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaataaaatataattaatgatggtgggacccattta 13032147  T
Q  142 gtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13032148 gtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 13032238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 37266660 - 37266851
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    |||||||||| |||| ||| |||||||||||| || ||||||||| ||||||||| ||||||||||  | ||||||||||||||||  ||  || |||||    
T  37266660 tctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgatggtgggacccactt 37266759  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||| || |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37266760 agtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 37266851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 35660755 - 35660565
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    |||| |||||||||| | | | |||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  35660755 tctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 35660656  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35660655 agtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 35660565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 11775721 - 11775909
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa--gtgaaatataattaatgataatgtaactcact 139  Q
    ||||||||||||||| | | |||||||||||| || ||||||||||||||||||| ||||||||||  || |||||||||||||||   ||  || ||||    
T  11775721 tctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacggtgggacccact 11775820  T
Q  140 tagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
    ||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  11775821 tagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 11775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 18625567 - 18625377
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| |||  |||||||  || || ||||||||| ||||||||| ||||||||||  | ||||||||||||||||  ||  || |||||    
T  18625567 tctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccactt 18625468  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  18625467 agtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 32129763 - 32129573
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||| ||| | | |||||||||||| || ||||||||| ||||||||| | |||||||| || ||||||||||||||||  ||  || |||||    
T  32129763 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccactt 32129664  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  ||||||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  32129663 agtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttcaccc 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 39902344 - 39902534
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||| ||||| || ||||||||||||||||  || ||  || ||    
T  39902344 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaatccattt 39902443  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  39902444 agtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccc 39902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 14349731 - 14349923
Alignment:
Q  40 cttctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcac 138  Q
    ||||||||||||||||| | | |||||||| ||| || | ||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||  || |||    
T  14349731 cttctccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatggtgggacccac 14349829  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||||| ||||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||    
T  14349830 ttagtggtaggacccaccatctattttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatcttcacccc 14349923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 232
Target Start/End: Complemental strand, 40753308 - 40753117
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||  | | |||||||| ||| || |||||||||| |||||||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  40753308 tctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 40753209  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||| ||||||  ||||| |||||||||||||||||| ||||||||||||||||||  |||||||||| ||||| |||||||||||||||||    
T  40753208 agtggtaggacccaccatatattttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttcacccc 40753117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 4895861 - 4895699
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| || ||||||||| ||||||||| | |||||||| || ||||||||||||||||  ||  || ||||||||| ||||||  |||||||    
T  4895861 catttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatct 4895762  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggat 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  4895761 attttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaataaagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 231
Target Start/End: Original strand, 34827126 - 34827311
Alignment:
Q  45 ccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaagtgaaatataattaatgataatgtaactcacttagtg 144  Q
    |||||||| ||| ||| |||||||| ||| || ||||||||| ||||| || ||    ||||||| |||||||||||| |||  ||  || |||||||||    
T  34827126 ccatttatatgt-tttccatttcttaaatttgaagagataaagacacaaaattttgaaaaaaagtaaaatataattaaagatggtgggacccacttagtg 34827224  T
Q  145 ataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
     |||||   |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||    
T  34827225 gtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttattttgctaaatggagatgatcttcaccc 34827311  T

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Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 215
Target Start/End: Complemental strand, 8441117 - 8440943
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | | |||| ||||| || ||||||||| ||||||| | |||| ||||| || ||||||||||||||||  ||  || |||||    
T  8441117 tctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatggtgggacacactt 8441018  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 215  Q
    |||| || | |  ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||    
T  8441017 agtggtatgtcgcaccatctatttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 207
Target Start/End: Complemental strand, 3057302 - 3057135
Alignment:
Q  40 cttctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcac 138  Q
    |||||||| |||||| ||| | ||||||||| || || ||||||||| |||| |||||| || ||||| || |||||||||||||||| |||| ||||||    
T  3057302 cttctccaattatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgtgactcac 3057203  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttt 207  Q
    ||| || |||||   |||||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||    
T  3057202 ttaatggtaggatccaccatctattttttgtgtttatctctatccaaattgc-aaattccatttatttt 3057135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 43309153 - 43309225
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcac 229  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  43309153 atctattttttatgtctatctctctccaacttgcaaaactccatttattttatcaaataaagaggatcttcac 43309225  T

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Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 18653382 - 18653472
Alignment:
Q  133 actcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 224  Q
    ||||||||| || ||| ||| || ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||| | |||||||||    
T  18653382 actcacttaatggtagaactcactatctattttttgtgtctatctctcttcaaattgc-aaactccatttattttgacaatttgagaggatc 18653472  T

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Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 1475780 - 1475699
Alignment:
Q  46 catttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgat 126  Q
    ||||||||||| ||| |||||||||||| || || |||||| ||||||||| ||||| ||||||| ||||||||||||||||    
T  1475780 catttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 1475699  T

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Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 4592730 - 4592858
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || |||||||| | |||||||| | |||||||| || ||||||||||||||||  ||  || |||||    
T  4592730 tctccatttatgtgtttctccatttcttcaatttggagagataata-cacataaaatattgaaaaaagtaaaatataattaatgatggtgggacccactt 4592828  T
Q  141 agtgataggacttaccatctattttttgtg 170  Q
    |||| || |||  |||||||||||||||||    
T  4592829 agtggtaagacccaccatctattttttgtg 4592858  T

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Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 3057419 - 3057534
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaat 214  Q
    |||||||||||| ||| ||||||||| ||| |||||   | ||||| |||||| ||||||||||||||| | ||| ||||||| |||||||||   ||||    
T  3057419 ataattaatgatgatggaactcactttgtggtaggatccatcatcttttttttttgtctatctctctccgaattg-aaaactctatttattttacaaaat 3057517  T
Q  215 ggagaggatcttcaccc 231  Q
    |||||||||||| ||||    
T  3057518 ggagaggatcttaaccc 3057534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 29341040 - 29341113
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||| ||||||||||||||||||| |||| | |||||||||||| |  ||||||||||||||||| ||||    
T  29341040 atctattttctgtgtctatctctctccaaattgc-atactccatttattataccaaatggagaggatctttaccc 29341113  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 36290593 - 36290682
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  |  ||||||||||||||||  ||||  |||||||||||||||||||||||||| ||||||    
T  36290593 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 36290682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 27428949 - 27428877
Alignment:
Q  119 ttaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgca 191  Q
    ||||||||  || |||||||||| || ||||| | |||||||||||||||||||||||||| ||||| |||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaaattgca 27428877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 225
Target Start/End: Original strand, 3440840 - 3440952
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatc---tattttttgtgtctatctctctccaacttgcaaaactccatttattttgtca 211  Q
    ||||||||||||||||  ||| | ||| ||||||||| |||||||   |||||||||||||||||||| ||| | |||  || |||||||||||||   |    
T  3440840 ataattaatgataatgagacttatttaatgataggacctaccatctagtattttttgtgtctatctctttcctaattg-taatctccatttattttaata 3440938  T
Q  212 aatggagaggatct 225  Q
    ||||||||||||||    
T  3440939 aatggagaggatct 3440952  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 17247397 - 17247476
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctc 182  Q
    ||||||| ||| ||||||||| || ||| ||| |||||| |||||| ||  |||| |||||||||| |||||||||||||    
T  17247397 aaaaagtaaaaaataattaattatgatggaacgcacttaatgatagaacccaccacctattttttgcgtctatctctctc 17247476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 32793418 - 32793487
Alignment:
Q  156 catctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatctt 226  Q
    |||||||||||||||| |||||||||| || |||  |||||||||||||||||  |||| || ||||||||    
T  32793418 catctattttttgtgtatatctctctctaaattg-taaactccatttattttgctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 1475683 - 1475638
Alignment:
Q  159 ctattttttgtgtctatctctctccaacttgcaaaactccatttat 204  Q
    ||||||||||| ||||| |||||| |||||||||||| ||||||||    
T  1475683 ctattttttgtatctatttctctcaaacttgcaaaacaccatttat 1475638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 9460655 - 9460599
Alignment:
Q  167 tgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 224  Q
    ||||||||||||||||||| |||| | |||| |||||||||  |||||||||||||||    
T  9460655 tgtgtctatctctctccaaattgc-atactctatttattttaccaaatggagaggatc 9460599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 43309067 - 43309112
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa 107  Q
    |||||||||||| || ||||||||| ||||||||| ||||||||||    
T  43309067 catttcttcaatttgaagagataaagacacataaaatcttgaaaaa 43309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 41660154 - 41660186
Alignment:
Q  160 tattttttgtgtctatctctctccaacttgcaa 192  Q
    |||||||||||||||||||||||||| ||||||    
T  41660154 tattttttgtgtctatctctctccaaattgcaa 41660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 9e-55; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 42 - 233
Target Start/End: Original strand, 56558208 - 56558400
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||| ||| | |  ||||||||||| || ||||||||| ||||||||| | |||||||| || ||||||||||||||||  ||  || |||||    
T  56558208 tctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccactt 56558307  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56558308 agtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccct 56558400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 34778350 - 34778539
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  34778350 tctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 34778449  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacc 230  Q
    |||| |||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  34778450 agtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 34778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 18207186 - 18206996
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | |  ||||||||||| || | ||||||| ||||||||| ||||||||||| | |||||||||||||||| |||  || |||||    
T  18207186 tctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatgatgggacccactt 18207087  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18207086 agtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttcaccc 18206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 19902064 - 19901874
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | |  ||||||||||| || ||||||||| ||||||||| | |||||||| || ||||||||||||||||  ||  || |||||    
T  19902064 tctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccactt 19901965  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  19901964 agtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcaccc 19901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 237
Target Start/End: Complemental strand, 3952309 - 3952120
Alignment:
Q  49 ttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgata 147  Q
    |||||||| | | |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || ||||||||| ||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggta 3952210  T
Q  148 ggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccccttatt 237  Q
    ||||  |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||    
T  3952209 ggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcacccattatt 3952120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 23610571 - 23610761
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||| ||| | | |||||||||||| || ||||||||| | ||||||| |||||||||| || ||||||| ||||||||  ||  || |||||    
T  23610571 tctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatggtgggacccactt 23610670  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| || |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23610671 agtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatcttcaccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 39862468 - 39862636
Alignment:
Q  64 tttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctat 162  Q
    |||||||||| || ||||||||| ||||||||| |||| ||||| || ||||||||||||||||  || |||||| |||||||||||||  |||||||||    
T  39862468 tttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaactcatttagtgataggacacaccatctat 39862567  T
Q  163 tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||||    
T  39862568 tttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttcaccc 39862636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 33247274 - 33247086
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaagtgaaatataattaatgataatgtaactcactta 141  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| ||   ||||| | ||||||||||||||||  || ||| || |||    
T  33247274 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcgaaaaaaa-taaaatataattaatgatggtggaacccattta 33247176  T
Q  142 gtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33247175 gtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 33247086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 42 - 234
Target Start/End: Complemental strand, 38079866 - 38079673
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    |||||||||||| || | | ||||| |||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  || ||  |||||    
T  38079866 tctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaatccactt 38079767  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccctt 234  Q
    |||  ||||||  ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38079766 agtagtaggacccaccatctatttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcacccctt 38079673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 42 - 233
Target Start/End: Complemental strand, 5763308 - 5763116
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||| ||| | | |||||||||||| || ||||||||| ||||||||| | |||||||| || ||||||||||||||||  ||  || |||||    
T  5763308 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccactt 5763209  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    |||| ||||||  |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||    
T  5763208 agtggtaggacccaccatctattttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttcacccct 5763116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 5416613 - 5416422
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa---gtgaaatataattaatgataatgtaactcac 138  Q
    |||| |||||||||| | | |||||||||||| || | ||||||| ||||||||| |||| |||||   || ||||||||||||||||  ||  || |||    
T  5416613 tctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgatggtgggacccac 5416514  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||| ||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5416513 ttagtggtaggacccacaatctattttt-gtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 30567868 - 30568008
Alignment:
Q  80 agataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctc 178  Q
    ||||||| ||||||||| | |||||||| || |||||||||||||||| ||| ||| ||||||||| ||||||  |||||||||||||||||||||||||    
T  30567868 agataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctc 30567967  T
Q  179 tctccaacttgcaaaactccatttattttgtcaaatggaga 219  Q
    ||| |||||||||||||||||||||||||| ||||||||||    
T  30567968 tcttcaacttgcaaaactccatttattttgccaaatggaga 30568008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 12312558 - 12312431
Alignment:
Q  105 aaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgt-gtctatctctctccaacttgcaaaactccattta 203  Q
    ||||| |||||||||||||||| |||  || ||||||||| |||||   |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  12312558 aaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttgcaaaactccattta 12312459  T
Q  204 ttttgtcaaatggagaggatcttcaccc 231  Q
    ||||| ||||||||||||||||||||||    
T  12312458 ttttgccaaatggagaggatcttcaccc 12312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 33262698 - 33262508
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||| | |||  ||||||||||| || ||||||||| ||||||||| | || ||||| || ||||||||||||||||  ||  ||  | ||    
T  33262698 tctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctattt 33262599  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| |||||   ||||||||||||||||||||||||||||| |||||||||||| | |||||||||| ||||| ||||||||||||||||    
T  33262598 agtggtaggatccaccatctattttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcaccc 33262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 24073546 - 24073735
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaagtgaaatataattaatgataatgtaactcactta 141  Q
    ||||||||||||||| | |  |||||||| || || |||||| ||  |||||||| ||||||||||   | ||||||||||||||   |  || ||||||    
T  24073546 tctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaaaaaaaaatatataattaatgatggcgggacccactta 24073645  T
Q  142 gtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||| ||||||  ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||||    
T  24073646 gtggtaggacccaccatctatttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatcttcaccc 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 12153100 - 12153273
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||              
T  12153100 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg---------- 12153189  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
           ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12153190 -------ggacccaccatctaatttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12153273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 52018811 - 52018882
Alignment:
Q  160 tattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52018811 tattttttgtatctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccc 52018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 47922493 - 47922327
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    ||||||| | || ||||| |||| ||||||| ||| | |||||||| || ||| |||||||  ||| |||  || ||||||||| ||||||  |||||||    
T  47922493 catttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatgatgggacccacttagtggtaggacccaccatct 47922394  T
Q  161 att-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatctt 226  Q
    ||| |||||||||||| ||||||||| ||||||||||| |||||||||  |||||||||||||||||    
T  47922393 attcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatctt 47922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 33524313 - 33524381
Alignment:
Q  163 tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  33524313 tttttgtatctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccc 33524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 52018712 - 52018795
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatg 124  Q
    ||||||||||||||| | | |||||||||||| || ||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  52018712 tctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatg 52018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 12241550 - 12241444
Alignment:
Q  46 catttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcacttagtg 144  Q
    ||||||||||| | | |||||||||||| || ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||  || |||||||||    
T  12241550 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtg 12241451  T
Q  145 ataggac 151  Q
     ||||||    
T  12241450 gtaggac 12241444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 1871280 - 1871388
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaat 214  Q
    |||||||||||| |||  || ||||||||  |||||   || |||||| |||| ||||||||||||||||| ||||| | ||||||||||||||||||||    
T  1871280 ataattaatgatgatgggacccacttagtagtaggatccactatctatattttttgtctatctctctccaaattgcata-ctccatttattttgtcaaat 1871378  T
Q  215 ggagaggatc 224  Q
     |||||||||    
T  1871379 tgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 47922221 - 47922035
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    |||| |||||||||| | | |||||||||||| |  ||||||||| |||| |||| | ||||||||  | ||||||| ||||||||  || ||| |||||    
T  47922221 tctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatggtggaacccactt 47922122  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| || |||  || ||||||||||||||| ||||| |    ||||||||||| ||||||||||||| |||||  | ||||| |||||||    
T  47922121 agtggtaagacccactatctattttttgtgtttatcttt----aacttgcaaaattccatttattttgccaaataaaaaggatattcaccc 47922035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 36688266 - 36688183
Alignment:
Q  109 tgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||| ||||||||||||  ||  || ||||||||||||||||| | ||  |||||||||||||||||||||||||| ||||||    
T  36688266 tgaaaaataattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattgcaa 36688183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 23474153 - 23474230
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||||||||||| |||||||||||||| |||| |||| | |||||||||||| ||  |||||||||||||||| |||||    
T  23474153 accatctattttatgtgtctatctctccccaaattgc-atactccatttattatgctaaatggagaggatctttacccc 23474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 26428971 - 26429061
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttat 204  Q
    |||||||||||| |||  || || | |||| ||||||| |||||||||| |||||||||||||| ||||||| |||||||||| |||||||    
T  26428971 ataattaatgatgatgagacccattcagtggtaggactcaccatctattcttttgtgtctatctttctccaaattgcaaaacttcatttat 26429061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 126
Target Start/End: Complemental strand, 17080785 - 17080701
Alignment:
Q  43 ctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattctt-gaaaaagtgaaatataattaatgat 126  Q
    |||||||||||||| | | |||||||||||| || ||||||||| ||| ||||| |||| |||||||| ||||||||| ||||||    
T  17080785 ctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgat 17080701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 34927488 - 34927596
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaa 213  Q
    |||||||||||| |||  ||  ||||| || ||||||  |||||||||| ||||||||||||||||||  || ||||||||| |||||||||||   |||    
T  34927488 ataattaatgatgatgagacatacttaatggtaggacccaccatctattcttttgtgtctatctctctttaaattgcaaaaccccatttattttagtaaa 34927587  T
Q  214 tggagagga 222  Q
    |||||||||    
T  34927588 tggagagga 34927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 56453904 - 56453816
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgca 191  Q
    ||||||| ||| ||||| ||||||  ||  || |||||| |||||||||  |||| ||||||||||||||||||||||||||| |||||    
T  56453904 aaaaagtaaaaaataatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgca 56453816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 5524438 - 5524527
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || |||||| |||||||||  ||||  |||||||| ||||||||||||||||| ||||||    
T  5524438 aaaaagtaaaaaataattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattgcaa 5524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 56269148 - 56269071
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||  ||  || ||||||||| ||||||  ||||  |||||||||||||||||||||||||| ||||||    
T  56269148 ataattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaattgcaa 56269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 48914590 - 48914475
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaat 214  Q
    |||||||||||||  | ||| |||||  |||||||||  || ||||||||| |||||| ||||||||| || |||| |  ||||||||||||||  ||||    
T  48914590 ataattaatgatagcggaacccactttatgataggacccacaatctattttatgtgtcgatctctctctaaattgc-attctccatttattttgctaaat 48914492  T
Q  215 ggagaggatcttcaccc 231  Q
    ||||| |||||| ||||    
T  48914491 ggagaagatctttaccc 48914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 13493276 - 13493385
Alignment:
Q  116 taattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctcc--aacttgcaaaactccatttattttgtcaaa 213  Q
    ||||||||||||| |  |||||||||||| | |||   || |||||||||  |||||||||||||||   || ||||| | |||||||||||||||||||    
T  13493276 taattaatgataaagggactcacttagtggtgggatccactatctattttacgtgtctatctctctctctaaattgcata-ctccatttattttgtcaaa 13493374  T
Q  214 tggagaggatc 224  Q
    | |||||||||    
T  13493375 tagagaggatc 13493385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 33841830 - 33841768
Alignment:
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 224  Q
    ||||||||||||||||||||||||| |||  | |||||||||| |||  |||||||||||||||    
T  33841830 attttttgtgtctatctctctccaaattg-tatactccatttactttaacaaatggagaggatc 33841768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 12312649 - 12312571
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataat 119  Q
    ||||||||||||||| | | |||||||||||| |  ||||||||| ||||||||| | ||| ||||||| |||||||||    
T  12312649 tctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataat 12312571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 36532673 - 36532738
Alignment:
Q  160 tattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatctt 226  Q
    |||||| |||||||||||||||| || |||  || ||||||||||||| ||| ||||||||||||||    
T  36532673 tattttatgtgtctatctctctctaaattgtgaa-ctccatttattttatcagatggagaggatctt 36532738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 224
Target Start/End: Original strand, 49811508 - 49811538
Alignment:
Q  194 actccatttattttgtcaaatggagaggatc 224  Q
    |||||||||||||||||||||||||||||||    
T  49811508 actccatttattttgtcaaatggagaggatc 49811538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 17493026 - 17493083
Alignment:
Q  136 cacttagtgataggacttaccatctatttt-ttgtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||||||  ||||  |||||| |||||||||||||||||||| ||||||    
T  17493026 cacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17493083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 37002335 - 37002246
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || |||||||| ||||||   ||||  |||||||||||||||||||| ||||| ||||||    
T  37002335 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggatccaccacttattttttgtgtctatctctttccaaattgcaa 37002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 42010108 - 42010197
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || || |||||||||||||   |||  |||||||||| ||||||||||||||| ||||||    
T  42010108 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtatctatctctctccaaattgcaa 42010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 5361474 - 5361506
Alignment:
Q  160 tattttttgtgtctatctctctccaacttgcaa 192  Q
    |||||||||||||||||||||||||| ||||||    
T  5361474 tattttttgtgtctatctctctccaaattgcaa 5361506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 16366447 - 16366638
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || |||||||||||||| |||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  16366447 tctccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgggacacactt 16366546  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||| |||||   ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16366547 agtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 16366638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 231
Target Start/End: Original strand, 7362495 - 7362686
Alignment:
Q  40 cttctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcac 138  Q
    ||||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  || ||| ||     
T  7362495 cttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccat 7362594  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||| || |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  7362595 ttagtggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatggaga-gatcttcaccc 7362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 21151081 - 21151271
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  21151081 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 21151180  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| |||||    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21151181 agtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 234
Target Start/End: Original strand, 18198185 - 18198378
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| ||||||||||||| |||||||| ||||||||||  | ||||||||||||||||  ||  ||||||||    
T  18198185 tctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggactcactt 18198284  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccctt 234  Q
    ||||  || ||  |||||||||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  18198285 agtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcacccctt 18198378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 45260573 - 45260384
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    |||| |||||||||| | | |||||||||||| || ||||||||| ||||||||| |||| ||||| || |||||||||||||||| |||  |  |||||    
T  45260573 tctctatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggatccactt 45260474  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacc 230  Q
    |||| |||||   || ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  45260473 agtggtaggatccacaatctattttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatcttcacc 45260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 44647894 - 44648084
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgat--aatgtaactcac 138  Q
    ||||||||||||||| | | |||||||||||| ||   ||||||| ||||||||| |||||||||| || ||||||||||||||||  |  |  || |||    
T  44647894 tctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatggagggagacccac 44647990  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||||| | |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44647991 ttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 44648084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 9559200 - 9559010
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||| ||| | |  |||||||| || || ||||||||| ||||||||| ||||||||||  | ||||||||||||||||  ||  || |||||    
T  9559200 tctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccactt 9559101  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  9559100 agtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 12139257 - 12139454
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactc-act 139  Q
    ||||||||||||||| | | |||||||||||| || |||||||||  |||||||| |||| ||||| || ||||||||||||||||  ||  || | |||    
T  12139257 tctccatttatgtgtttctccatttcttcaatttggagagataaa--cacataaaatcttaaaaaaagtaaaatataattaatgatggtgggaccccact 12139354  T
Q  140 tagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccccttattat 239  Q
    || || ||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| ||||||||||||||||||    
T  12139355 taatggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaatgaagagaatcttcaccccttattat 12139454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 232
Target Start/End: Original strand, 4888400 - 4888587
Alignment:
Q  46 catttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcacttagtg 144  Q
    ||||||||||| | |  |||||||| || || ||||||||| ||||||||| |||| |||||  | ||||||||||||||||  ||  ||  ||||||||    
T  4888400 catttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgggacctacttagtg 4888499  T
Q  145 ataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
     ||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4888500 gtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcacccc 4888587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 47226219 - 47226035
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | |  ||||||||||| || |||||||||| |||||||| ||||| ||||||| ||||||||||||||||  ||  || || ||    
T  47226219 tctccatttatgtgtttctctatttcttcaatttggagagataaaa-cacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccattt 47226121  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
    |||| | ||||  |||||  ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47226120 agtggtgggacccaccat--attttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 25084874 - 25084690
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | ||||| || ||| || ||||||||| ||||||||| | ||||||||  | ||||||||||||||||  ||  || |||||    
T  25084874 tctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatggtgggacccactt 25084775  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgt--caaatggagaggat 223  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||  |||| |||| |  ||||||||||||||    
T  25084774 agtggtaggacccaccatctattttttgtgtctatctctctccaacttacaaaactttatttttttttttccaaatggagaggat 25084690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 232
Target Start/End: Original strand, 33450471 - 33450627
Alignment:
Q  78 agagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctat 175  Q
    ||||||| ||||||| ||| | ||||||||  | ||| |||||||||||| |||  || ||||||||| | ||||  |||||||||| ||||||||||||    
T  33450471 agagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctat 33450570  T
Q  176 ctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||||||||| ||||||||||| |||||||||  ||||||||||||||||| |||||    
T  33450571 ctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaacccc 33450627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 39855914 - 39855770
Alignment:
Q  87 aacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaa 185  Q
    ||||| |||| |||||||||| || |||| ||||||||||| |||  || ||||||||| ||||||  ||||||| |||| |||||||||||||||||||    
T  39855914 aacacttaaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaa 39855815  T
Q  186 cttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
     || | |||||||||||| ||||||||||| |||| ||||| ||||    
T  39855814 attac-aaactccatttaatttgtcaaatgaagagaatcttaaccc 39855770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 235
Target Start/End: Complemental strand, 47500355 - 47500234
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaa 213  Q
    |||||||||||| |||  || ||||||||| | ||||  |||||||||| |||||||||||||||||||||| || |||||||| |||||||||   |||    
T  47500355 ataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaa 47500256  T
Q  214 tggagaggatcttcacccctta 235  Q
    ||||||||||||| ||||||||    
T  47500255 tggagaggatcttaacccctta 47500234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 989154 - 989239
Alignment:
Q  137 acttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggat 223  Q
    |||||||| ||||||  || || |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  989154 acttagtggtaggacccactatatattttttgtgtctatctctctccaaattgc-aaactccatttaatttgtcaaatggagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 47271180 - 47271107
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||||    
T  47271180 accatcaattttttgtgtctatctctctccaaattgc-aaactccatttattttgctaaatggagaggatcttca 47271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 34986018 - 34985909
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaa 213  Q
    |||||||||||| |||  ||||| |||||| |  |||  |||||||||| |||||||||||||||||||||| ||||||||||| |||||||||  ||||    
T  34986018 ataattaatgatgatgggactcatttagtggtttgacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaa 34985919  T
Q  214 tggagaggat 223  Q
    | ||||||||    
T  34985918 ttgagaggat 34985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 47799984 - 47799895
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || ||||||||||||||||  | ||  |||||||||||||||||||||||||| ||||||    
T  47799984 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 47799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 33608901 - 33608845
Alignment:
Q  162 ttttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggaga 219  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  33608901 ttttttgtgtttatctctctccaaattgc-aaactccatttattttaccaaatggaga 33608845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 19027735 - 19027685
Alignment:
Q  136 cacttagtgataggacttaccatctatttttt-gtgtctatctctctccaa 185  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  19027735 cacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 19027685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 20726901 - 20726951
Alignment:
Q  136 cacttagtgataggacttaccatctatttt-ttgtgtctatctctctccaa 185  Q
    ||||||||||||||||  ||||| |||||| ||||||||||||||||||||    
T  20726901 cacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 20726951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 28528577 - 28528631
Alignment:
Q  138 cttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||||| ||||  | |||||| ||||||||||||||||| ||||||    
T  28528577 cttagtgataggactcaccacttgttttttttgtctatctctctccaaattgcaa 28528631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 14696809 - 14696752
Alignment:
Q  136 cacttagtgataggacttaccatctatttttt-gtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||||||  ||||  |||||||| |||||||||||||||||| ||||||    
T  14696809 cacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 14696752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 19889118 - 19889029
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  || ||| ||||||||||||||||  || |  |||||||||| ||||||||| || || ||||||    
T  19889118 aaaaagtaaaaaataattaatgatggtggaacccacttagtgataggacccacaacttattttttgtatctatctctttctaaattgcaa 19889029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 32915955 - 32916035
Alignment:
Q  111 aaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgca 191  Q
    |||||||||| |||||  ||  ||||||||| || ||||||  || || |||||||||||||||||||||| ||| |||||    
T  32915955 aaatataattcatgatggtgggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaattgca 32916035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 35737161 - 35737193
Alignment:
Q  160 tattttttgtgtctatctctctccaacttgcaa 192  Q
    |||||||||||||||||||||||||| ||||||    
T  35737161 tattttttgtgtctatctctctccaaattgcaa 35737193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 42 - 233
Target Start/End: Original strand, 4804377 - 4804569
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||| ||| | | |||||||||||| || ||||||||| ||||||||| | |||||||| || ||||||||||||||||  ||  || |||||    
T  4804377 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacccactt 4804476  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  4804477 agtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccct 4804569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 62 - 232
Target Start/End: Original strand, 17944111 - 17944282
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| || ||||||||||||||||||| ||||| ||||||| ||||||||||||||||  ||  || || |||||| |||||| ||||||||    
T  17944111 catttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggacctaccatct 17944210  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  17944211 attttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcacccc 17944282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 7162033 - 7162203
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || ||||||||  ||||||  |||||||    
T  7162033 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtagtaggacccaccatct 7162132  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  7162133 atttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 12412586 - 12412756
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| || ||||||||||| ||||||| | |||||||| || ||||||||||||||||  || ||| ||||||||| ||||||  |||||||    
T  12412586 catttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccaccatct 12412685  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  12412686 atttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 62 - 232
Target Start/End: Complemental strand, 21159495 - 21159324
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| || ||| ||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || ||||||||| ||||||  |||||||    
T  21159495 catttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatct 21159396  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  21159395 attttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttcacccc 21159324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 1249292 - 1249105
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || | ||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  1249292 tctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 1249193  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacc 230  Q
    |||| ||||||  ||||||||||||||||  || |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  1249192 agtggtaggacccaccatctattttttgt--ctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatcttcacc 1249105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 85 - 231
Target Start/End: Complemental strand, 13089852 - 13089705
Alignment:
Q  85 aaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctcc 183  Q
    |||||||||||| | ||||||||  | ||||||||||||||||  ||   | ||||||||| ||||||  ||||||||| ||||||||||||||||||||    
T  13089852 aaaacacataaaattttgaaaaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctcc 13089753  T
Q  184 aacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  13089752 aacttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 13089705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 32737899 - 32737976
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  32737899 accatctattttttgtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccc 32737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 227690 - 227522
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    ||||||| |||| || ||||||| | ||||| ||| | ||||||||| | ||| ||||| |||||| |||  |  ||||||||| ||||||  |||||||    
T  227690 catttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatccacttagtggtaggacccaccatct 227591  T
Q  161 att-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
    ||| ||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||    
T  227590 attcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatcttca 227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 27826467 - 27826654
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | |  |||||||| || |  ||||||||| |||||||||   ||  ||||| | ||||||||||||||||  ||  || |||||    
T  27826467 tctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatggtgggacccactt 27826566  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
    |||| ||||||  ||||||||||||||||||||||||||||| | |||||||| || || |||||||  |||||||||||||||||||    
T  27826567 agtggtaggacccaccatctattttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatcttca 27826654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 1516239 - 1516163
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||| || |||||||||||| ||||||| |||||||||||||| |||||||| |||||||| ||||    
T  1516239 accatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1516163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 1518328 - 1518252
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||| || |||||||||||| ||||||| |||||||||||||| |||||||| |||||||| ||||    
T  1518328 accatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1518252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 29698092 - 29698220
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||| ||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||  || |||||    
T  29698092 tctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 29698191  T
Q  141 agtgataggacttaccatctattttttgt 169  Q
    | || |||||   ||||||||||||||||    
T  29698192 aatggtaggatccaccatctattttttgt 29698220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 7215937 - 7215816
Alignment:
Q  102 gaaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatt 201  Q
    |||||||| |||  |||||||||||| ||  || || |||||| ||||||  || ||||||||| ||||||||||||||||||| |||   |  ||||||    
T  7215937 gaaaaagtaaaacgtaattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgcacttccatt 7215838  T
Q  202 tattttgtcaaatggagaggat 223  Q
    |||||| |||||||||||||||    
T  7215837 tattttatcaaatggagaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 24484870 - 24484959
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || ||||||||||||||||  ||||  |||||||||||||||||||||||||| ||||||    
T  24484870 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 24484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 30460875 - 30460930
Alignment:
Q  163 tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggaga 219  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  30460875 tttttgtgtctatctttctccaaattgcaaa-ctccatttattttgtcaaatggaga 30460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 13888556 - 13888478
Alignment:
Q  154 accatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||| |||||||||  || || ||||||||||| ||||    
T  13888556 accatctattattttgtgtatatctctctccaaattgcaaaactctatttattttagcatattgagaggatcttaaccc 13888478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 1515574 - 1515498
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||| | || |||||||||||| ||||||| |||||||||||||| ||||| || |||||||| ||||    
T  1515574 accatctattttttttatccatctctctccaaattgcaaa-ctccatttattttgccaaattgataggatcttaaccc 1515498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 32737803 - 32737888
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgat 126  Q
    ||||||||||| ||| | | |||||||||||| || ||||||||| ||||||||| | ||| ||||||| ||||||||||||||||    
T  32737803 tctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 32737888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 2142377 - 2142288
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  || ||| ||| || |||| ||||  ||||  |||||||||||||||||||||||||| ||||||    
T  2142377 aaaaagtaaaaaataattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaattgcaa 2142288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 28696680 - 28696624
Alignment:
Q  162 ttttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggaga 219  Q
    |||||| ||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  28696680 ttttttttgtctatctctctccaaattgc-aaactcaatttattttgccaaatggaga 28696624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 2800641 - 2800574
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 224  Q
    ||||||||| ||||||||||||||||||| |||   |  |||||| ||||| ||||||||||||||||    
T  2800641 atctattttatgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatc 2800574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 17828598 - 17828525
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||| ||||||||||||||||||| |||| | |||||| ||||| |  |||||| |||||||||| ||||    
T  17828598 atctattttatgtgtctatctctctccaaattgc-atactccaattattataccaaatgtagaggatctttaccc 17828525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 30460769 - 30460831
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaat 123  Q
    ||||||||| || || ||||||||| ||||||||| |||||||||| || |||||||||||||    
T  30460769 catttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaat 30460831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 185
Target Start/End: Complemental strand, 32254103 - 32254033
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaa 185  Q
    ||||||||||||| ||  ||||||||| |||||||||  |||| || |||||| |||||||||| ||||||    
T  32254103 ataattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctccctccaa 32254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 7545661 - 7545718
Alignment:
Q  136 cacttagtgataggacttaccatctattttttg-tgtctatctctctccaacttgcaa 192  Q
    ||||||||||||||||  ||||  ||||||||| ||||||||||||||||| ||||||    
T  7545661 cacttagtgataggacccaccacttattttttggtgtctatctctctccaaattgcaa 7545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 3177061 - 3177093
Alignment:
Q  198 catttattttgtcaaatggagaggatcttcacc 230  Q
    |||||||||| ||||||||||||||||||||||    
T  3177061 catttattttatcaaatggagaggatcttcacc 3177093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 29229149 - 29229204
Alignment:
Q  167 tgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggat 223  Q
    ||||||||||||||||||| |||| | |||||||||||| |  ||||||||||||||    
T  29229149 tgtgtctatctctctccaaattgc-atactccatttattataccaaatggagaggat 29229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 35316754 - 35316944
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    |||||||||| |||| | | |||||||||||| || ||||||||| ||| ||||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  35316754 tctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 35316853  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35316854 agtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 35316944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 28564820 - 28565011
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg--aaaaagtgaaatataattaatgataatgtaactcact 139  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| ||||   ||||||| ||||||||||||||||  ||  || ||||    
T  28564820 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatggtgggacccact 28564919  T
Q  140 tagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||| ||||||  |||||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  28564920 tagtggtaggacccaccatctattttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatcttcaccc 28565011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 13238610 - 13238797
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    |||||||||||| || | |  ||||||||||| || ||||||||| ||||||||| ||||||||||  | ||||||||||||||||  ||  || |||||    
T  13238610 tctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccactt 13238709  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
     ||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  13238710 ggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 13238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 21733469 - 21733570
Alignment:
Q  232 cttattatcattgatcagcaaatgctcagtagcaaataattctagttattaccaaactacatgtaatccttgctaaactaccaaactacatatcattgat 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  21733469 cttattatcattgatcagcaaatgctcagtagcaaataattctagttattactaaactacatgtaatacttgctaaactaccaaactacatataattgat 21733568  T
Q  332 ga 333  Q
    ||    
T  21733569 ga 21733570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 62 - 232
Target Start/End: Complemental strand, 23259613 - 23259442
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| |  || |||||| ||| ||||| |||| ||||| || ||||||||||||||||  ||  |  ||||||||  ||||||  |||| ||    
T  23259613 catttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatggtgggatccacttagtagtaggacccaccagct 23259514  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  23259513 attttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcacccc 23259442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 11864913 - 11864988
Alignment:
Q  156 catctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  11864913 catctattttttgtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcaccc 11864988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 45625106 - 45625035
Alignment:
Q  160 tattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  45625106 tatttcttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 45625035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 2063396 - 2063472
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||| ||||    
T  2063396 accatctattttttgtgtctatctctctccaaattgc-aaactctatttattttgtcaaatgaagaggatcttaaccc 2063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 4446981 - 4446860
Alignment:
Q  102 gaaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatt 201  Q
    |||||||| ||| ||||||||||||| || ||| || |||||| |||||   || ||||||||| ||||||||||||||| ||| ||| | |  ||||||    
T  4446981 gaaaaagtaaaaaataattaatgatagtgaaacccaattagtggtaggatccactatctattttatgtgtctatctctcttcaaattgtacacttccatt 4446882  T
Q  202 tattttgtcaaatggagaggat 223  Q
    |||||| |||||||||||||||    
T  4446881 tattttatcaaatggagaggat 4446860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 39465704 - 39465789
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgat 126  Q
    ||||||||||||||| | | ||||| |||||| || ||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  39465704 tctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 39465789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 40640711 - 40640783
Alignment:
Q  154 accatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatct 225  Q
    |||||||||| |||||| | ||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  40640711 accatctattcttttgtatatatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 32009971 - 32009928
Alignment:
Q  191 aaaactccatttattttgtcaaatggagaggatcttcacccctt 234  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  32009971 aaaactccatttattttgtcaaatggagaggatcttcagccctt 32009928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 374984 - 375073
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || |||||||| |||||||  ||||  |||||||||||||||||||||||||| ||||||    
T  374984 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 375073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 8988858 - 8988935
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||  ||  || |||||||||||||||| || ||  |||||||||||||||||||||||||| ||||||    
T  8988858 ataattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaattgcaa 8988935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 41983485 - 41983401
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgat 126  Q
    ||||||||||||||| | | |||||||| ||| || ||||||||| |||||||||| ||||||||| || ||||||||||||||||    
T  41983485 tctccatttatgtgtttctccatttctttaatttggagagataaagacacataaat-cttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 19908814 - 19908899
Alignment:
Q  146 taggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    ||||||| || ||||||||| |||||||||||| |||||| ||||| | ||||||||||| | ||||||| |||||||||| ||||||    
T  19908814 taggactcactatctattttatgtgtctatctc-ctccaaattgcata-ctccatttattatatcaaatgaagaggatctttacccct 19908899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 30857708 - 30857642
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 224  Q
    |||||||||||||||||| |||||| ||| || || | ||||||||||||||| ||||||||||||||    
T  30857708 atctattttttgtgtctacctctcttcaaattacata-ctccatttattttgtgaaatggagaggatc 30857642  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 38824078 - 38824145
Alignment:
Q  164 ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| ||||||||||||||||| || ||||||||||||||||||  ||||| |||| |||||| ||||    
T  38824078 ttttttgtctatctctctccaaattacaaaactccatttattttagcaaatagagatgatcttaaccc 38824145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 22061498 - 22061433
Alignment:
Q  158 tctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 224  Q
    |||||||| ||||||||||||||| ||| ||||| | || ||||||||||||||||| |||||||||    
T  22061498 tctattttatgtgtctatctctcttcaaattgcata-cttcatttattttgtcaaattgagaggatc 22061433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 35315523 - 35315620
Alignment:
Q  133 actcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||| |||||||||  |||| ||||| ||||||| ||||||||||||| |||||    ||||||||||||   |||||||||||||||| ||||    
T  35315523 actcacttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcatct-tccatttatttttataaatggagaggatcttaaccc 35315620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 374548 - 374499
Alignment:
Q  78 agagataaaaacacataaattcttg-aaaaagtgaaatataattaatgat 126  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  374548 agagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 23459930 - 23459841
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || || |||||||||||||   |||  |||||||||||||||||||||||||| ||||||    
T  23459930 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 23459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 36929763 - 36929823
Alignment:
Q  159 ctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagag 220  Q
    ||||||| ||||||||||||||||||| |||| | |||||||||||||||  ||||||||||    
T  36929763 ctattttatgtgtctatctctctccaaattgc-atactccatttattttgctaaatggagag 36929823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 36758885 - 36758818
Alignment:
Q  163 tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||||||||||||||||| |||| ||  ||||||||||||   |||||||||||||||| ||||    
T  36758885 tttttgtgtctatctctctccaaattgc-aacttccatttatttttataaatggagaggatctttaccc 36758818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 36259207 - 36259249
Alignment:
Q  232 cttattatcattgatcagcaaatgctcagtagcaaataattct 274  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||    
T  36259207 cttatcatcactgatcagcaaatgctcagtagcaaacaattct 36259249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 13780522 - 13780579
Alignment:
Q  136 cacttagtgataggacttaccatctatttt-ttgtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||||||  ||||  |||||| |||||||||||||||||||| ||||||    
T  13780522 cacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 13780579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 31618851 - 31618732
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccattt 202  Q
    ||||||| ||| ||||||||||||  ||  ||||||||| ||||| |||| || ||||||||| | | ||||||| ||||||| |||  | |||||||||    
T  31618851 aaaaagtaaaaaataattaatgattgtgggactcacttaatgatatgactcactatctattttatatatctatctttctccaaattg-tatactccattt 31618753  T
Q  203 attttgtcaaatggagaggatc 224  Q
      ||| ||||||||||||||||    
T  31618752 -ctttatcaaatggagaggatc 31618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 21454578 - 21454476
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccattt 202  Q
    ||||||| ||| ||||||||||||  || ||| |||||| || || |||  || |||||||||| ||||||||||||||| || || | |||||||||||    
T  21454578 aaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatctattttt-gtgtctatctctctctaaattac-aaactccattt 21454481  T
Q  203 atttt 207  Q
    |||||    
T  21454480 atttt 21454476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 32444384 - 32444416
Alignment:
Q  199 atttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||||||||||||||| ||||    
T  32444384 atttattttgtcaaatggagaggatcttaaccc 32444416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 36758726 - 36758675
Alignment:
Q  174 atctctctccaacttgcaaaactccatttattttgtcaaatggagaggatctt 226  Q
    |||||||||||| ||||| | ||||||||| |||| |||||||||||||||||    
T  36758726 atctctctccaaattgcata-ctccatttactttgacaaatggagaggatctt 36758675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 5e-50; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 40 - 231
Target Start/End: Complemental strand, 43720095 - 43719903
Alignment:
Q  40 cttctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcac 138  Q
    ||||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| |||| |||||  | ||||||||||||||||  ||  || |||    
T  43720095 cttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatggtgggacccac 43719996  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||| ||||||  || || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43719995 ttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttcaccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 19830572 - 19830387
Alignment:
Q  48 tttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa--gtgaaatataattaatgataatgtaactcacttagtga 145  Q
    ||||||||| ||| |||||||||||| || ||||||||| ||||||||| |||| |||||  || ||||||||||||||||  ||  || |||||| ||     
T  19830572 tttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgatggtgggacccacttaatgg 19830473  T
Q  146 taggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||  |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19830472 taggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 19830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 27033600 - 27033770
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    |||||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  |  ||||||||| ||||||  |||||||    
T  27033600 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggacccaccatct 27033699  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27033700 atttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 2229916 - 2230102
Alignment:
Q  46 catttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtg 144  Q
    ||||||||||| | |  ||||||| ||| || ||||||||| ||||||||| | |||||||| || ||||||||||||||||  || ||  |||||||||    
T  2229916 catttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtggaaaccacttagtg 2230015  T
Q  145 ataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
     ||||||  | |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||    
T  2230016 gtaggacccatcatctattttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggatgttcaccc 2230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 34373780 - 34373950
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagtgataggacttaccatct 160  Q
    ||||| |||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  ||  | |||||| ||||||  |||||||    
T  34373780 cattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacctaattagtggtaggacccaccatct 34373879  T
Q  161 attttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  34373880 attttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcaccc 34373950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 40851702 - 40851891
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataatt-aatgataatgtaactcact 139  Q
    ||||||||||||| | | | |||||||||||| || ||||||||| ||||||||| |||||||||| || |||||| ||| ||||||  |   || ||||    
T  40851702 tctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatggtaggacccact 40851801  T
Q  140 tagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcac 229  Q
    ||||| | | ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40851802 tagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatcttcac 40851891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 24754681 - 24754776
Alignment:
Q  136 cacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  24754681 cacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 24754776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 24763678 - 24763773
Alignment:
Q  136 cacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  24763678 cacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 24763773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 228
Target Start/End: Original strand, 46167322 - 46167509
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| ||| |||||||||||| |  ||||||||| ||| ||| | |||||||||| || ||||||||||||| ||  |   |  |||||    
T  46167322 tctccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccactt 46167421  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 228  Q
    |||| ||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||    
T  46167422 agtggtaggacccaccatatattttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatggagaggatgttca 46167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 213
Target Start/End: Complemental strand, 34373731 - 34373559
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| | ||| ||| |||||||||| || ||||||||||||||||  ||  || |||||    
T  34373731 tctccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 34373632  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaa 213  Q
    |||| ||||||  ||||||||||||| |||||||||||| |  |||||||||||||| |||||||||| ||||    
T  34373631 agtggtaggacccaccatctatttttagtgtctatctctatggaacttgcaaaactctatttattttgccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 3671756 - 3671678
Alignment:
Q  232 cttattatcattgatcagcaaatgctcagtagcaaataattctagttattaccaaactacatgtaatccttgctaaactac 312  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||| ||| |||| |||||||||    
T  3671756 cttattatcattgatcagcaaatgctc--tagcaaataattctagttattactaaactacatataacccttactaaactac 3671678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 48084822 - 48084939
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaa 213  Q
    |||||||||||| |||  || ||||||||| | ||||  |||||||||| ||||||||||||||||| |||| ||||||||||| |||||||||  ||||    
T  48084822 ataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaa 48084921  T
Q  214 tggagaggatcttcaccc 231  Q
    ||||||||||||| ||||    
T  48084922 tggagaggatcttaaccc 48084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 207
Target Start/End: Original strand, 12402894 - 12403061
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa--gtgaaatataattaatgataatgtaactcact 139  Q
    ||||||||||||||| | | |||||  | ||| || ||||||||| ||||||||| |||| |||||  || ||||||||||||| ||  ||  |||||||    
T  12402894 tctccatttatgtgtttcttcattttcttaatttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggactcact 12402993  T
Q  140 tagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttt 207  Q
    ||||| ||| |   |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||    
T  12402994 tagtggtagaatccaccatctaatttttatatctatctctctccaacttgcaaaactctatttatttt 12403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 24647905 - 24647957
Alignment:
Q  179 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 24647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 550962 - 550790
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaa-ttcttgaaaaagtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||| | | | ||||||||| || || ||||||||| | ||||||| || || ||||||| |||||||| |||| ||  ||  || |||||    
T  550962 tctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtgggacccactt 550863  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaat 214  Q
    | ||||||||   |||||||||||||||| | ||||| ||||||| |||| ||||||||||||||||| |||||    
T  550862 aatgataggatccaccatctattttttgtatatatctttctccaaattgc-aaactccatttattttgccaaat 550790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 566898 - 566746
Alignment:
Q  63 atttcttcaatctgtagagataaaaacacataaattcttgaaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctat 162  Q
    |||||||| || || ||||||||||| ||||||| |||||||||||| |||||||| |||| |   ||  || |||||| ||||||||    |||| |||    
T  566898 atttcttccatttggagagataaaaatacataaaatcttgaaaaagtaaaatataaataataaaggtgggacccacttaatgataggatccgccatatat 566799  T
Q  163 ttttt-gtgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 215  Q
    ||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||    
T  566798 ttttttgtatctatctctctccaaattgc-aaactccatttattttgccaaatg 566746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 31523752 - 31523663
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || |||||||| |||||||  ||||  |||||||||||||||||||||||||| ||||||    
T  31523752 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 31523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 28229456 - 28229365
Alignment:
Q  133 actcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatct 225  Q
    ||||| ||| |||||||||| |||| ||||||||||||||||| ||| ||| | |||| | ||||||||||||||   |||||||||||||||    
T  28229456 actcatttaatgataggactcaccacctattttttgtgtctatatctttcctaattgc-acactccatttattttaataaatggagaggatct 28229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 29586373 - 29586454
Alignment:
Q  149 gacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||| ||||||||| |||||||||||||||||||  ||| | |||||||||||| ||  ||||| |||||||||| ||||    
T  29586373 gacttactatctattttatgtgtctatctctctccaaactgc-atactccatttattatgctaaatgaagaggatctttaccc 29586454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 42613071 - 42613160
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || ||||||||||||||||  ||||  |||||||| ||||||||||||| ||| ||||||    
T  42613071 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttttgtctatctctcttcaaattgcaa 42613160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 49679354 - 49679265
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  || || |||||||||||||   |||  |||||||||||||||||||||||||| ||||||    
T  49679354 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 49679265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 10474468 - 10474402
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatc 224  Q
    ||||||||| ||||||||| |||||| || ||||| | ||||||||||| |||||||| |||||||||    
T  10474468 atctattttatgtgtctatatctctcaaaattgcata-ctccatttattatgtcaaatagagaggatc 10474402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 33632867 - 33632940
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||| ||||||||||||||||||| |||| |  ||||||||||| |  |||||||||| |||||| ||||    
T  33632867 atctattttatgtgtctatctctctccaaattgc-atgctccatttattataccaaatggagaagatctttaccc 33632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 44637987 - 44638044
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 215  Q
    ||||||||| ||||| |||||||||| || ||||| | |||||||||||||||||||||    
T  44637987 atctattttatgtgtttatctctctcaaaattgcata-ctccatttattttgtcaaatg 44638044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 226
Target Start/End: Complemental strand, 51982656 - 51982547
Alignment:
Q  116 taattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 215  Q
    ||||||||||| ||  |||||||||| |||||| ||  || | ||||||| ||| ||||||||||||||| |||||    ||||||||||||   |||||    
T  51982656 taattaatgatgatagaactcacttaatgatagaacccactaactattttatgtatctatctctctccaaattgcatct-tccatttatttttataaatg 51982558  T
Q  216 gagaggatctt 226  Q
    |||||||||||    
T  51982557 gagaggatctt 51982547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 3009272 - 3009339
Alignment:
Q  163 tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||| ||||||||||||||||| |||| ||  ||||||||||||   |||||||||||||||| ||||    
T  3009272 tttttttgtctatctctctccaaattgc-aacttccatttatttttataaatggagaggatctttaccc 3009339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 33979937 - 33980001
Alignment:
Q  115 ataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctct 179  Q
    ||||||||||||| ||  ||| | ||| |||||||| | ||||| ||||||||||||||||||||    
T  33979937 ataattaatgatagtgagacttatttaatgataggattcaccatttattttttgtgtctatctct 33980001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 8e-49; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 50484315 - 50484505
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||| ||| || ||||||||| ||||||||| |||||||||| || |||||||||||||||   ||  || |||||    
T  50484315 tctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgacggtgggacccactt 50484414  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||| | | ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50484415 agtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 50484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 45 - 231
Target Start/End: Original strand, 12151699 - 12151886
Alignment:
Q  45 ccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcacttagt 143  Q
    |||||||||||| | | ||||| |||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||  ||  || ||||||||    
T  12151699 ccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagt 12151798  T
Q  144 gataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    | ||||||  || ||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  12151799 ggtaggacccacaatctattttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatcttcaccc 12151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 42 - 232
Target Start/End: Complemental strand, 50294209 - 50294018
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    |||||||||| |||| | |  |||||||| || || ||||||||| ||||||||| ||||||||||  | ||||||||||||||||  |   |  |||||    
T  50294209 tctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtaggatccactt 50294110  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  50294109 agtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttcacccc 50294018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 42 - 232
Target Start/End: Complemental strand, 48327300 - 48327109
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag--tgaaatataattaatgataatgtaactcact 139  Q
    ||||||||||||||| | |  |||||||| || || ||| |||||   ||||||| ||||||||||   | ||||||||||||||||  || | | ||||    
T  48327300 tctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgatggtggacc-cact 48327202  T
Q  140 tagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 232  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  48327201 tagtggtaggactcaccatctattttttttgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcacccc 48327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 12380907 - 12380831
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12380907 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccct 12380831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 12384974 - 12384898
Alignment:
Q  157 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccct 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12384974 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccct 12384898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 40328209 - 40328390
Alignment:
Q  46 catttatgtgtctttacatttcttcaatctgtagagataaaa-acacataaattcttgaaaaa--gtgaaatataattaatgataatgtaactcacttag 142  Q
    ||||||||||| | | |||||||| ||| || |||||||||| ||||||||| ||||||||||  || |||||||| |||||||  || ||| |||||||    
T  40328209 catttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgatggtggaacccacttag 40328308  T
Q  143 tgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttc 227  Q
    || | ||||  ||||||||||||| |||||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||||    
T  40328309 tggtgggacccaccatctattttt-gtgtctatctctc--caatttgcaaaactccatttattttgccaaatggagaggatcttc 40328390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 45978047 - 45978124
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  45978047 accatctattttttgtatctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttcaccc 45978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 23862081 - 23861908
Alignment:
Q  63 atttcttcaatctgtagagataaaaacacataaattcttgaaaaag--tgaaatataattaatgataatgtaactcacttagtgataggacttacca--- 157  Q
    ||||||||||| || | ||||||| ||||||||| ||||||||||   | ||||||||||||||||  ||  |  ||||||||| ||||| | ||||       
T  23862081 atttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatggtgggatccacttagtggtaggattcaccacca 23861982  T
Q  158 tctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |||||||| |||||||    
T  23861981 tctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaaatagagaggatattcaccc 23861908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 12381056 - 12380924
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||  ||||||||    
T  12381056 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggactcactt 12380957  T
Q  141 agtgataggacttaccatctattttttgtgtct 173  Q
    |||| ||| ||  ||||||||||||||||||||    
T  12380956 agtggtagaacccaccatctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 12385123 - 12384991
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||  ||||||||    
T  12385123 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggactcactt 12385024  T
Q  141 agtgataggacttaccatctattttttgtgtct 173  Q
    |||| ||| ||  ||||||||||||||||||||    
T  12385023 agtggtagaacccaccatctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 7840710 - 7840635
Alignment:
Q  156 catctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| || |||||| | |||||||||||||    
T  7840710 catctatttcttgtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatcttcaccc 7840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 18976338 - 18976260
Alignment:
Q  154 accatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||| ||||    
T  18976338 accatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 18976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 7841856 - 7841771
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgat 126  Q
    ||||||||||| ||| ||| |||||||||||| || ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||    
T  7841856 tctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 7841771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 30077728 - 30077639
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||| ||  |||||||||||||||| ||  ||||  |||||||||||||||||||||||||| ||||||    
T  30077728 aaaaagtaaaaaataattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattgcaa 30077639  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 6613490 - 6613551
Alignment:
Q  232 cttattatcattgatcagcaaatgctcagtagcaaataattctagttattaccaaactacat 293  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  6613490 cttattatcaccgatcagcaaatgctcaatagcaaataattctagttattgctaaactacat 6613551  T

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Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 39426200 - 39426317
Alignment:
Q  102 gaaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatt 201  Q
    |||||||| ||| ||||||||||||| ||  || || |||||| ||||||  || ||||||||| ||||||||||||||||||| |||   |  ||||||    
T  39426200 gaaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgtacttccatt 39426299  T
Q  202 tattttgtcaaatggaga 219  Q
    |||||| |||||||||||    
T  39426300 tattttatcaaatggaga 39426317  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 32361340 - 32361264
Alignment:
Q  154 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacc 230  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||| | ||||||   |||||||||||||| ||||||    
T  32361340 accatctatcttttgtgtccatctctctccaacttacaaaactctaattatttcaccaaatggagaggattttcacc 32361264  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 1228563 - 1228496
Alignment:
Q  164 ttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||| ||||||||||| |||||||||||||||||||||   ||||| |||||||||| ||||    
T  1228563 ttttgtgtctgtctctctccaaattgcaaaactccatttattttagtaaatgaagaggatcttaaccc 1228496  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 45977951 - 45978032
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaa 122  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||||||||| ||||| ||||| | ||||||||||||    
T  45977951 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaa 45978032  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 30860794 - 30860726
Alignment:
Q  162 ttttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacc 230  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||  |||||  || ||||||||||    
T  30860794 ttttttatgtctatatctctccaacttgcaaaactccattcattttgctaaatgatgaagatcttcacc 30860726  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 24977239 - 24977310
Alignment:
Q  111 aaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctc 182  Q
    |||||||| |||||||  || ||| ||||||||| |||||   |||||||||||||||||||||||||||||    
T  24977239 aaatataactaatgattgtggaacccacttagtggtaggatccaccatctattttttgtgtctatctctctc 24977310  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 26860134 - 26860056
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctct 181  Q
    ||||||| ||| ||||||||||||  ||  |  |||||||||||||||| ||| ||||||||| |||||||||||||||    
T  26860134 aaaaagtaaaaaataattaatgattgtgggatccacttagtgataggacctactatctattttatgtgtctatctctct 26860056  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 52280123 - 52280034
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||| ||| ||||||||||||  ||  |  ||||||||||||||||  ||||  |||||||| ||||||||||||||||| ||||||    
T  52280123 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaattgcaa 52280034  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 46045678 - 46045767
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaa 192  Q
    ||||||||||| ||||||||||||  ||  |  ||||||||||||||||| | ||  |||||||| |||  |||||||||||| ||||||    
T  46045678 aaaaagtgaaaaataattaatgatggtgggatacacttagtgataggactcatcacttattttttttgttcatctctctccaagttgcaa 46045767  T

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Target: scaffold0035 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 16543 - 16347
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    |||| |||||||||| | | |||||||||||| || ||||||||||  ||||||| ||||||||||  | |||||||||||||||| |||  || |||||    
T  16543 tctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatgatgggacccactt 16444  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccccttatt 237  Q
    |||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| ||||    
T  16443 agtggtaggacccaccatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacggagaggatcttcaccccatatt 16347  T

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Target: scaffold0250 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 7076 - 7270
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| || ||||||||| ||| ||||| ||||||||||  | ||||||||||||||||  || ||| |||||    
T  7076 tctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatggtggaacccactt 7175  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactcc----atttattttgtcaaatggagaggatcttcaccc 231  Q
    | |  ||||||  |||||||||||||||||||||||||||||||||||||||||||||    |||||||||| ||||||||||||||||||||||    
T  7176 aatagtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttattttgccaaatggagaggatcttcaccc 7270  T

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Target: scaffold0008 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 9344 - 9151
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaagtgaaatataattaatgataatgtaactcactta 141  Q
    ||||||||||||||| | |  |||||||| || || |||||||||  ||||| || |||| ||||| |  |||||||||||||||  || ||  ||||||    
T  9344 tctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatcttaaaaaaat--aatataattaatgatggtggaatccactta 9247  T
Q  142 gtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccccttatt 237  Q
    ||| | ||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||||    
T  9246 gtggttggacccaccatctattttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcacccattatt 9151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 231
Target Start/End: Complemental strand, 22590 - 22399
Alignment:
Q  40 cttctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaa-gtgaaatataattaatgataatgtaactcac 138  Q
    ||||||||||||||| | | | ||||||||  || |  ||||||||| ||||||||| |||||||||| || ||||||||||||| ||  || |||||||    
T  22590 cttctccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaactcac 22491  T
Q  139 ttagtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||| |||||   || ||||||||||||||||||||||| |  || |||| |||||||||||||||||  ||||| |||||||||| ||||    
T  22490 ttagtggtaggatccactatctattttttgtgtctatctctttgtaaattgc-aaactccatttattttgctaaatgcagaggatcttaaccc 22399  T

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Target: scaffold0009 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 6559 - 6396
Alignment:
Q  64 tttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctat 162  Q
    |||||||||| |  ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  |   || || |||||  ||||||  |||||||||    
T  6559 tttcttcaattttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatctat 6460  T
Q  163 tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatctt 226  Q
    ||||||||||| ||||| ||||||||||||||  |||||||||||   |||| |||||||||||    
T  6459 tttttgtgtctgtctctttccaacttgcaaaatcccatttattttacgaaatagagaggatctt 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 73986 - 73817
Alignment:
Q  42 tctccatttatgtgtctttacatttcttcaatctgtagagataaaaacacataaattcttgaaaaag-tgaaatataattaatgataatgtaactcactt 140  Q
    ||||||||||||||| | | |||||||||||| |  ||||||||||||||||||| ||||||||||  | |||||||||||||||| |||              
T  73986 tctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatg---------- 73897  T
Q  141 agtgataggacttaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttc 227  Q
           ||||  ||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  73896 -------ggacccaccatctatattttgcgtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

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Target: scaffold0456 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 13721 - 13799
Alignment:
Q  154 accatctattttttgt-gtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 231  Q
    |||||||||||||| | |||||||||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||    
T  13721 accatctatttttttttgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 13645 - 13710
Alignment:
Q  62 catttcttcaatctgtagagataaaaacacataaattcttg-aaaaagtgaaatataattaatgat 126  Q
    |||||||||||| || ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||    
T  13645 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 13710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 17390 - 17311
Alignment:
Q  103 aaaaagtgaaatataattaatgataatgtaactcacttagtgataggacttaccatctattttttgtgtctatctctctc 182  Q
    ||||||| ||| ||||||||||||  ||  || ||||||||||||||||  | ||  |||||||||||||||||||||||    
T  17390 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 4752 - 4695
Alignment:
Q  136 cacttagtgataggacttaccatctatttttt-gtgtctatctctctccaacttgcaa 192  Q
    ||||||||||||||||  ||||  |||||||| |||||||||||||||||| ||||||    
T  4752 cacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 4695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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