View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3109_low_7 (Length: 314)
Name: NF3109_low_7
Description: NF3109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3109_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 6299807 - 6300102
Alignment:
| Q |
1 |
tgaccacgaaggcgcgttcgacgcagatgtatgagcaacaccattctcattaaccactgaactatcatcatcaatgtcataacgtgcaccatacaaattg |
100 |
Q |
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| T |
6299807 |
tgaccacgaaggcgcgttcgacgcagatgtatgagcaacaccgttctcattaaccactgaactatcatcatcaatgtcataacgtgcaccatacaaattg |
6299906 |
T |
|
| Q |
101 |
tcatgtggataataatgttgaagagaaacaatatctggtgctaacacaccagttgtaaaaggagaactcatcattaagtttttcaccaccaaaccatttc |
200 |
Q |
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| T |
6299907 |
tcatgtggataataatgttgaagagaaacaatatccggtgctaacacaccagttgtaaaaggagaactcatcattaagtttttcaccaccaaaccatttc |
6300006 |
T |
|
| Q |
201 |
gcagtggaattgtaggcgaaaaattggagtagtaagttgttccttgtggcacaattggaccactttttgatttgggatttctctgatgttgaacat |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6300007 |
gcagtggaattgtaggcgaaaaattggagtagtaagttgttccttgtggcacaattggaccactttttgatttgggatttctctgatgttgaacat |
6300102 |
T |
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