View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3113_high_10 (Length: 255)

Name: NF3113_high_10
Description: NF3113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3113_high_10
NF3113_high_10
[»] chr3 (88 HSPs)
chr3 (3-130)||(38890314-38890441)
chr3 (3-131)||(11168375-11168503)
chr3 (3-131)||(10955883-10956010)
chr3 (3-148)||(10191152-10191295)
chr3 (3-131)||(5191925-5192052)
chr3 (3-131)||(10084245-10084372)
chr3 (3-131)||(10958179-10958306)
chr3 (5-148)||(38210647-38210789)
chr3 (3-131)||(1321753-1321881)
chr3 (3-131)||(51726863-51726990)
chr3 (6-148)||(747035-747177)
chr3 (6-148)||(50494277-50494417)
chr3 (7-149)||(6065632-6065774)
chr3 (11-149)||(25533707-25533843)
chr3 (6-131)||(456185-456309)
chr3 (6-131)||(458562-458686)
chr3 (3-131)||(5522482-5522610)
chr3 (6-136)||(53893905-53894036)
chr3 (7-149)||(6063282-6063424)
chr3 (6-149)||(10621365-10621509)
chr3 (3-132)||(25389179-25389309)
chr3 (11-125)||(7606465-7606580)
chr3 (29-131)||(11170670-11170772)
chr3 (3-131)||(22114159-22114288)
chr3 (21-149)||(18099009-18099140)
chr3 (11-152)||(3859792-3859934)
chr3 (21-132)||(32219372-32219486)
chr3 (21-130)||(43228578-43228687)
chr3 (6-149)||(28412869-28413010)
chr3 (21-132)||(18096756-18096870)
chr3 (149-238)||(40750717-40750805)
chr3 (27-131)||(41849351-41849454)
chr3 (32-148)||(24980007-24980126)
chr3 (3-111)||(26720821-26720928)
chr3 (28-132)||(5886496-5886600)
chr3 (28-132)||(5899969-5900073)
chr3 (21-131)||(42990591-42990701)
chr3 (33-130)||(43226381-43226477)
chr3 (21-128)||(4308143-4308251)
chr3 (30-131)||(27635515-27635618)
chr3 (21-132)||(36012114-36012227)
chr3 (21-132)||(53917522-53917635)
chr3 (31-149)||(18162960-18163081)
chr3 (27-132)||(1313698-1313805)
chr3 (30-149)||(28101847-28101965)
chr3 (11-99)||(35919018-35919107)
chr3 (30-126)||(3314979-3315078)
chr3 (30-149)||(43423307-43423428)
chr3 (21-132)||(53915354-53915467)
chr3 (30-132)||(6484652-6484757)
chr3 (30-132)||(25688016-25688121)
chr3 (28-128)||(27101043-27101144)
chr3 (30-148)||(28181298-28181417)
chr3 (21-132)||(9604463-9604575)
chr3 (30-132)||(45883237-45883341)
chr3 (27-132)||(12267835-12267942)
chr3 (30-149)||(43421259-43421380)
chr3 (30-114)||(51943667-51943752)
chr3 (30-132)||(32263897-32264001)
chr3 (30-132)||(880312-880416)
chr3 (3-131)||(4103752-4103879)
chr3 (27-148)||(15781170-15781293)
chr3 (60-149)||(31151667-31151755)
chr3 (27-131)||(1626543-1626649)
chr3 (30-148)||(3307054-3307176)
chr3 (28-149)||(54691416-54691538)
chr3 (30-149)||(23633745-23633863)
chr3 (27-148)||(28761287-28761407)
chr3 (79-131)||(36957651-36957703)
chr3 (27-148)||(47148745-47148861)
chr3 (30-131)||(51674626-51674729)
chr3 (29-132)||(47701536-47701638)
chr3 (27-146)||(5926611-5926731)
chr3 (21-131)||(42992673-42992783)
chr3 (32-131)||(53468313-53468414)
chr3 (27-114)||(48361546-48361634)
chr3 (54-111)||(53591503-53591559)
chr3 (27-132)||(880101-880208)
chr3 (30-146)||(4666808-4666926)
chr3 (30-131)||(561640-561739)
chr3 (74-148)||(17795594-17795669)
chr3 (74-148)||(19104034-19104109)
chr3 (77-131)||(25635718-25635772)
chr3 (21-55)||(42992557-42992591)
chr3 (75-132)||(36871166-36871222)
chr3 (88-132)||(35917893-35917937)
chr3 (77-131)||(25634224-25634278)
chr3 (54-131)||(6232119-6232192)
[»] chr1 (78 HSPs)
chr1 (6-149)||(47177659-47177802)
chr1 (6-148)||(47180010-47180152)
chr1 (3-128)||(10399690-10399815)
chr1 (3-132)||(51750333-51750461)
chr1 (3-131)||(13762130-13762257)
chr1 (3-131)||(15294694-15294821)
chr1 (3-131)||(20291750-20291878)
chr1 (3-131)||(13447133-13447260)
chr1 (6-149)||(16226465-16226608)
chr1 (3-149)||(46431547-46431693)
chr1 (6-148)||(23786137-23786278)
chr1 (6-148)||(16231860-16232002)
chr1 (11-131)||(20302743-20302863)
chr1 (3-130)||(31735383-31735508)
chr1 (3-149)||(51757824-51757974)
chr1 (21-131)||(2617829-2617939)
chr1 (8-148)||(9459277-9459416)
chr1 (8-148)||(9463104-9463243)
chr1 (3-131)||(13358867-13358995)
chr1 (6-148)||(24325960-24326101)
chr1 (3-148)||(39932368-39932514)
chr1 (3-131)||(28842788-28842915)
chr1 (11-131)||(2510202-2510321)
chr1 (3-119)||(28840973-28841088)
chr1 (21-132)||(27336800-27336914)
chr1 (3-131)||(51752657-51752789)
chr1 (30-148)||(2949079-2949199)
chr1 (21-132)||(23816195-23816307)
chr1 (21-132)||(47906576-47906688)
chr1 (21-149)||(28206911-28207042)
chr1 (21-149)||(50307388-50307519)
chr1 (21-132)||(27338991-27339105)
chr1 (21-132)||(39462826-39462940)
chr1 (27-131)||(50078653-50078759)
chr1 (27-146)||(25251123-25251244)
chr1 (27-132)||(14097831-14097939)
chr1 (21-149)||(6995539-6995669)
chr1 (28-132)||(15823861-15823968)
chr1 (27-132)||(12302367-12302475)
chr1 (30-145)||(9240937-9241054)
chr1 (30-148)||(3579431-3579550)
chr1 (30-149)||(31490226-31490346)
chr1 (27-132)||(4131238-4131345)
chr1 (27-148)||(50248417-50248540)
chr1 (30-132)||(11457338-11457442)
chr1 (30-152)||(18839902-18840026)
chr1 (27-126)||(28998116-28998220)
chr1 (27-126)||(29003832-29003936)
chr1 (29-149)||(38925327-38925451)
chr1 (28-149)||(47451943-47452066)
chr1 (30-126)||(13215398-13215496)
chr1 (60-149)||(16429299-16429388)
chr1 (32-148)||(15916706-15916821)
chr1 (30-149)||(41647234-41647356)
chr1 (60-149)||(17185978-17186067)
chr1 (30-124)||(17324388-17324484)
chr1 (30-148)||(25248398-25248518)
chr1 (30-132)||(31424878-31424982)
chr1 (21-131)||(25860270-25860378)
chr1 (32-148)||(17319203-17319321)
chr1 (30-114)||(18307423-18307508)
chr1 (60-149)||(8348904-8348991)
chr1 (27-148)||(40134255-40134378)
chr1 (31-148)||(30780361-30780482)
chr1 (30-132)||(31422722-31422827)
chr1 (27-149)||(14183454-14183574)
chr1 (27-113)||(6114989-6115074)
chr1 (27-131)||(18800439-18800543)
chr1 (69-114)||(25128227-25128272)
chr1 (96-149)||(13785106-13785159)
chr1 (60-131)||(30790266-30790337)
chr1 (82-132)||(17324495-17324546)
chr1 (30-108)||(16428966-16429043)
chr1 (75-132)||(16432747-16432805)
chr1 (27-106)||(50076563-50076643)
chr1 (96-132)||(2232872-2232908)
chr1 (96-132)||(9526743-9526778)
chr1 (75-134)||(13125324-13125383)
[»] chr5 (67 HSPs)
chr5 (3-131)||(34476910-34477038)
chr5 (3-131)||(34479275-34479403)
chr5 (21-157)||(3372968-3373104)
chr5 (3-131)||(10528955-10529083)
chr5 (6-149)||(10749997-10750138)
chr5 (6-149)||(10757473-10757614)
chr5 (3-129)||(25921333-25921458)
chr5 (6-128)||(25804321-25804442)
chr5 (11-148)||(2175203-2175341)
chr5 (11-131)||(38882390-38882509)
chr5 (3-131)||(4236922-4237049)
chr5 (3-131)||(21684310-21684437)
chr5 (3-148)||(31179213-31179358)
chr5 (22-149)||(31543047-31543173)
chr5 (3-148)||(18469303-18469448)
chr5 (3-149)||(18466978-18467124)
chr5 (32-149)||(15354413-15354530)
chr5 (32-149)||(15356689-15356806)
chr5 (32-149)||(23665368-23665485)
chr5 (32-149)||(23793102-23793219)
chr5 (32-132)||(23741713-23741813)
chr5 (11-149)||(39798332-39798469)
chr5 (3-146)||(27912830-27912973)
chr5 (6-144)||(31545381-31545517)
chr5 (3-131)||(4410316-4410442)
chr5 (27-132)||(38959988-38960092)
chr5 (21-149)||(36402169-36402300)
chr5 (11-149)||(27910735-27910873)
chr5 (27-149)||(41585579-41585703)
chr5 (11-131)||(10587117-10587236)
chr5 (30-149)||(31465832-31465954)
chr5 (30-149)||(40221843-40221964)
chr5 (21-131)||(2818194-2818307)
chr5 (21-132)||(16776466-16776578)
chr5 (30-132)||(2724207-2724311)
chr5 (6-132)||(15552543-15552668)
chr5 (30-148)||(34530559-34530679)
chr5 (30-131)||(17818352-17818455)
chr5 (27-132)||(21289070-21289177)
chr5 (30-132)||(26098147-26098251)
chr5 (27-149)||(36208884-36209008)
chr5 (27-132)||(12555774-12555881)
chr5 (32-126)||(21948348-21948446)
chr5 (21-132)||(39854791-39854905)
chr5 (21-130)||(18511074-18511185)
chr5 (33-122)||(23667644-23667733)
chr5 (21-126)||(6747611-6747721)
chr5 (27-150)||(24127167-24127293)
chr5 (27-126)||(20505709-20505813)
chr5 (30-131)||(658220-658323)
chr5 (30-131)||(37705644-37705747)
chr5 (21-126)||(6745375-6745485)
chr5 (21-110)||(18509201-18509291)
chr5 (27-123)||(20045297-20045395)
chr5 (30-111)||(26098045-26098127)
chr5 (31-126)||(1189474-1189571)
chr5 (30-126)||(6756806-6756905)
chr5 (30-132)||(18596959-18597063)
chr5 (21-111)||(17073192-17073283)
chr5 (33-114)||(10474203-10474285)
chr5 (30-126)||(2954728-2954827)
chr5 (30-126)||(20043303-20043402)
chr5 (30-124)||(16092069-16092164)
chr5 (28-131)||(696187-696292)
chr5 (27-131)||(6661053-6661156)
chr5 (30-111)||(25904417-25904499)
chr5 (75-132)||(20054193-20054251)
[»] chr7 (67 HSPs)
chr7 (3-149)||(38394290-38394435)
chr7 (3-149)||(20297666-20297811)
chr7 (3-148)||(20299764-20299908)
chr7 (3-153)||(40836578-40836728)
chr7 (3-149)||(11759431-11759576)
chr7 (3-132)||(7471837-7471965)
chr7 (3-148)||(25542832-25542976)
chr7 (1-149)||(28485867-28486014)
chr7 (3-131)||(48457957-48458084)
chr7 (3-130)||(35933-36059)
chr7 (3-130)||(44868-44994)
chr7 (6-148)||(1606687-1606827)
chr7 (3-132)||(28487857-28487985)
chr7 (3-126)||(18345845-18345967)
chr7 (4-130)||(3036029-3036154)
chr7 (3-130)||(1850285-1850411)
chr7 (6-131)||(2935576-2935700)
chr7 (3-149)||(7469863-7470007)
chr7 (3-131)||(7094317-7094445)
chr7 (3-131)||(38396938-38397070)
chr7 (3-131)||(43253374-43253502)
chr7 (3-131)||(7092070-7092198)
chr7 (32-149)||(40550161-40550278)
chr7 (3-130)||(3878881-3879009)
chr7 (6-132)||(7351508-7351633)
chr7 (3-129)||(40946632-40946759)
chr7 (32-132)||(22137411-22137511)
chr7 (32-132)||(40552438-40552538)
chr7 (15-132)||(9027050-9027166)
chr7 (6-132)||(7349134-7349258)
chr7 (21-149)||(13099316-13099446)
chr7 (21-132)||(20626355-20626465)
chr7 (21-132)||(20630246-20630356)
chr7 (21-132)||(20642665-20642775)
chr7 (32-115)||(22108401-22108484)
chr7 (3-132)||(1046774-1046909)
chr7 (3-132)||(1049146-1049280)
chr7 (30-126)||(9679383-9679482)
chr7 (28-132)||(11355581-11355688)
chr7 (27-131)||(31434910-31435016)
chr7 (30-149)||(21678386-21678507)
chr7 (30-114)||(21990474-21990560)
chr7 (21-128)||(27306096-27306205)
chr7 (28-149)||(26804833-26804956)
chr7 (32-132)||(4295797-4295899)
chr7 (27-132)||(37411983-37412090)
chr7 (30-130)||(42330864-42330966)
chr7 (27-126)||(44724898-44725000)
chr7 (30-132)||(443922-444026)
chr7 (27-148)||(21680349-21680472)
chr7 (30-126)||(22251452-22251550)
chr7 (29-149)||(42223479-42223601)
chr7 (27-132)||(25276449-25276550)
chr7 (32-126)||(9681146-9681243)
chr7 (27-148)||(26295765-26295885)
chr7 (80-131)||(1502832-1502883)
chr7 (30-114)||(21592024-21592108)
chr7 (60-131)||(24748946-24749017)
chr7 (8-103)||(31155811-31155908)
chr7 (30-149)||(7188861-7188980)
chr7 (30-149)||(24465857-24465976)
chr7 (27-123)||(39145856-39145954)
chr7 (30-149)||(27832487-27832606)
chr7 (99-149)||(31153690-31153740)
chr7 (71-131)||(24813364-24813425)
chr7 (75-111)||(20137030-20137066)
chr7 (75-134)||(6349163-6349222)
[»] chr6 (46 HSPs)
chr6 (3-148)||(4816071-4816216)
chr6 (3-128)||(14507037-14507161)
chr6 (6-131)||(33309189-33309313)
chr6 (6-131)||(33311458-33311582)
chr6 (3-131)||(2628743-2628871)
chr6 (3-130)||(19704422-19704552)
chr6 (6-148)||(12195354-12195496)
chr6 (3-151)||(14458604-14458752)
chr6 (3-131)||(28241179-28241306)
chr6 (3-148)||(20915197-20915342)
chr6 (6-149)||(26068234-26068376)
chr6 (6-148)||(26065961-26066102)
chr6 (6-148)||(29754549-29754690)
chr6 (6-132)||(5273072-5273197)
chr6 (3-131)||(30967530-30967657)
chr6 (6-149)||(26932402-26932545)
chr6 (3-132)||(1230105-1230234)
chr6 (21-149)||(11982871-11983000)
chr6 (15-132)||(26065320-26065439)
chr6 (15-132)||(26085289-26085408)
chr6 (21-132)||(9020269-9020382)
chr6 (32-151)||(15367380-15367501)
chr6 (1-131)||(30034463-30034590)
chr6 (28-151)||(15346691-15346816)
chr6 (75-149)||(8717194-8717268)
chr6 (27-149)||(24338294-24338418)
chr6 (30-132)||(30728685-30728789)
chr6 (27-148)||(3629711-3629835)
chr6 (75-132)||(18322493-18322550)
chr6 (30-126)||(3394716-3394815)
chr6 (30-149)||(3631783-3631904)
chr6 (28-132)||(15530022-15530129)
chr6 (21-111)||(3233605-3233697)
chr6 (30-149)||(25480227-25480347)
chr6 (77-132)||(13057587-13057643)
chr6 (32-149)||(17012387-17012503)
chr6 (30-123)||(1069588-1069683)
chr6 (75-146)||(22491005-22491077)
chr6 (27-132)||(3027719-3027822)
chr6 (75-132)||(15541006-15541064)
chr6 (77-148)||(32280391-32280463)
chr6 (29-131)||(22611023-22611122)
chr6 (75-132)||(14466717-14466775)
chr6 (71-132)||(28078063-28078124)
chr6 (92-131)||(10584355-10584395)
chr6 (96-132)||(22351721-22351756)
[»] chr4 (84 HSPs)
chr4 (3-149)||(22132228-22132376)
chr4 (3-131)||(2484731-2484858)
chr4 (3-149)||(18847500-18847645)
chr4 (1-149)||(47868747-47868895)
chr4 (3-149)||(22134456-22134603)
chr4 (3-132)||(51015593-51015721)
chr4 (3-131)||(5635334-5635461)
chr4 (3-150)||(11437710-11437857)
chr4 (3-148)||(22044231-22044376)
chr4 (3-132)||(11435302-11435431)
chr4 (1-131)||(9176331-9176461)
chr4 (3-149)||(11008407-11008553)
chr4 (3-149)||(22046525-22046671)
chr4 (3-149)||(16931630-16931774)
chr4 (3-132)||(37089228-37089357)
chr4 (3-131)||(8631276-8631404)
chr4 (3-131)||(31849456-31849584)
chr4 (3-130)||(14633666-14633792)
chr4 (3-148)||(38409552-38409696)
chr4 (11-131)||(24348557-24348676)
chr4 (11-149)||(11006093-11006231)
chr4 (6-132)||(22782593-22782719)
chr4 (3-131)||(9174003-9174131)
chr4 (3-129)||(26085836-26085962)
chr4 (11-131)||(5198759-5198879)
chr4 (6-131)||(7941674-7941798)
chr4 (11-126)||(9148591-9148705)
chr4 (6-149)||(22780211-22780354)
chr4 (6-149)||(44599679-44599819)
chr4 (3-149)||(16933987-16934128)
chr4 (29-130)||(47210655-47210755)
chr4 (6-148)||(18709003-18709145)
chr4 (3-148)||(6765192-6765335)
chr4 (21-149)||(22802576-22802706)
chr4 (3-149)||(53405481-53405627)
chr4 (21-128)||(40637435-40637545)
chr4 (27-148)||(2891657-2891780)
chr4 (28-149)||(14789272-14789395)
chr4 (28-132)||(14787290-14787396)
chr4 (21-131)||(17662108-17662219)
chr4 (27-132)||(38928040-38928147)
chr4 (30-148)||(33415334-33415455)
chr4 (21-128)||(24889157-24889265)
chr4 (30-149)||(36921337-36921458)
chr4 (30-132)||(36919445-36919549)
chr4 (27-149)||(49088921-49089045)
chr4 (21-132)||(22800721-22800834)
chr4 (30-148)||(47563127-47563248)
chr4 (21-132)||(52942346-52942460)
chr4 (30-149)||(16453676-16453797)
chr4 (32-132)||(3824465-3824569)
chr4 (30-148)||(37312924-37313044)
chr4 (29-149)||(24446501-24446623)
chr4 (60-149)||(3937125-3937212)
chr4 (27-132)||(6133202-6133309)
chr4 (27-132)||(27499413-27499520)
chr4 (32-132)||(40091276-40091378)
chr4 (31-132)||(4215672-4215774)
chr4 (30-149)||(5101284-5101405)
chr4 (58-148)||(16455624-16455714)
chr4 (32-126)||(13547524-13547621)
chr4 (27-126)||(12395712-12395813)
chr4 (27-126)||(12400674-12400775)
chr4 (21-92)||(24879351-24879423)
chr4 (60-149)||(41997887-41997976)
chr4 (28-126)||(48486687-48486787)
chr4 (60-132)||(18409209-18409281)
chr4 (30-126)||(47275092-47275190)
chr4 (30-131)||(36378659-36378761)
chr4 (60-127)||(18534703-18534770)
chr4 (60-131)||(19323090-19323161)
chr4 (75-126)||(38270016-38270068)
chr4 (21-92)||(24880813-24880887)
chr4 (30-132)||(56030828-56030929)
chr4 (30-131)||(5664605-5664706)
chr4 (30-131)||(36380716-36380818)
chr4 (75-131)||(8756119-8756176)
chr4 (60-131)||(15032410-15032480)
chr4 (60-131)||(12102479-12102550)
chr4 (30-132)||(38890090-38890191)
chr4 (75-149)||(52043411-52043483)
chr4 (60-113)||(18537360-18537412)
chr4 (96-132)||(4885149-4885185)
chr4 (77-132)||(19096298-19096354)
[»] chr2 (43 HSPs)
chr2 (3-131)||(23452094-23452222)
chr2 (6-149)||(35217809-35217950)
chr2 (3-132)||(13909902-13910030)
chr2 (3-132)||(27105067-27105196)
chr2 (6-148)||(35215433-35215573)
chr2 (11-130)||(45279860-45279978)
chr2 (6-149)||(45332019-45332162)
chr2 (10-148)||(36558721-36558859)
chr2 (6-149)||(36560980-36561122)
chr2 (3-148)||(24162063-24162208)
chr2 (11-120)||(42064776-42064884)
chr2 (32-131)||(19501859-19501958)
chr2 (34-131)||(19504194-19504291)
chr2 (26-132)||(17849403-17849511)
chr2 (27-132)||(19007927-19008034)
chr2 (21-126)||(21520556-21520664)
chr2 (21-132)||(43623439-43623553)
chr2 (27-126)||(42923373-42923475)
chr2 (27-128)||(3022459-3022562)
chr2 (30-131)||(28459054-28459157)
chr2 (54-131)||(42453798-42453874)
chr2 (21-114)||(7462825-7462919)
chr2 (30-149)||(28196925-28197046)
chr2 (30-146)||(38020370-38020488)
chr2 (30-148)||(14837558-14837679)
chr2 (30-149)||(22287180-22287301)
chr2 (27-126)||(22162891-22162992)
chr2 (27-149)||(6263992-6264116)
chr2 (32-114)||(5375225-5375308)
chr2 (30-123)||(6258687-6258782)
chr2 (27-132)||(11577974-11578077)
chr2 (27-127)||(15539396-15539497)
chr2 (30-126)||(34979456-34979554)
chr2 (39-149)||(11739420-11739532)
chr2 (54-116)||(17848754-17848816)
chr2 (30-131)||(22707613-22707716)
chr2 (60-148)||(22874431-22874519)
chr2 (30-102)||(22407346-22407419)
chr2 (73-149)||(45238841-45238918)
chr2 (60-132)||(20592395-20592467)
chr2 (11-56)||(42453041-42453086)
chr2 (27-149)||(38414027-38414150)
chr2 (75-150)||(37962789-37962865)
[»] chr8 (46 HSPs)
chr8 (3-132)||(22684509-22684638)
chr8 (3-148)||(44721193-44721337)
chr8 (3-131)||(4424368-4424496)
chr8 (3-149)||(18811057-18811203)
chr8 (3-131)||(32339659-32339787)
chr8 (3-132)||(3883452-3883580)
chr8 (3-132)||(18813231-18813360)
chr8 (3-149)||(28283061-28283206)
chr8 (3-132)||(43530465-43530593)
chr8 (3-131)||(15809568-15809695)
chr8 (11-149)||(3874351-3874488)
chr8 (3-131)||(27827335-27827463)
chr8 (3-131)||(27829646-27829774)
chr8 (6-148)||(43082327-43082467)
chr8 (3-131)||(609085-609214)
chr8 (6-149)||(43079956-43080097)
chr8 (13-148)||(24873039-24873175)
chr8 (21-132)||(28251427-28251539)
chr8 (21-132)||(15073073-15073186)
chr8 (33-148)||(33541255-33541372)
chr8 (27-132)||(14808128-14808235)
chr8 (21-149)||(15068343-15068473)
chr8 (30-131)||(30480365-30480468)
chr8 (29-149)||(35872300-35872422)
chr8 (27-131)||(36865906-36866012)
chr8 (30-132)||(13858350-13858452)
chr8 (21-132)||(41383025-41383138)
chr8 (27-149)||(37214108-37214232)
chr8 (40-149)||(14477630-14477741)
chr8 (27-131)||(31162579-31162683)
chr8 (29-132)||(5372042-5372148)
chr8 (30-149)||(14419034-14419155)
chr8 (31-150)||(25952891-25953012)
chr8 (21-104)||(41385107-41385192)
chr8 (27-151)||(27911446-27911570)
chr8 (27-151)||(27957865-27957989)
chr8 (75-149)||(15956369-15956444)
chr8 (60-126)||(27106769-27106835)
chr8 (75-148)||(21482724-21482798)
chr8 (60-132)||(15185580-15185652)
chr8 (75-131)||(2467995-2468052)
chr8 (75-129)||(1225571-1225626)
chr8 (60-131)||(3005502-3005572)
chr8 (85-148)||(183246-183310)
chr8 (75-149)||(21480916-21480991)
chr8 (96-133)||(30423489-30423525)
[»] scaffold0267 (1 HSPs)
scaffold0267 (8-130)||(332-455)
[»] scaffold0472 (1 HSPs)
scaffold0472 (6-149)||(6506-6647)
[»] scaffold0891 (1 HSPs)
scaffold0891 (15-149)||(4517-4650)
[»] scaffold1674 (1 HSPs)
scaffold1674 (6-146)||(1294-1433)
[»] scaffold0038 (1 HSPs)
scaffold0038 (3-131)||(41341-41468)
[»] scaffold0005 (3 HSPs)
scaffold0005 (3-130)||(183500-183626)
scaffold0005 (28-149)||(50335-50458)
scaffold0005 (28-132)||(52334-52440)
[»] scaffold0068 (1 HSPs)
scaffold0068 (3-131)||(29473-29600)
[»] scaffold0370 (1 HSPs)
scaffold0370 (3-132)||(1309-1438)
[»] scaffold0140 (2 HSPs)
scaffold0140 (32-149)||(24723-24840)
scaffold0140 (32-149)||(22448-22565)
[»] scaffold0025 (1 HSPs)
scaffold0025 (3-131)||(69149-69277)
[»] scaffold0250 (1 HSPs)
scaffold0250 (3-131)||(3182-3309)
[»] scaffold0131 (1 HSPs)
scaffold0131 (30-131)||(14247-14349)
[»] scaffold0127 (1 HSPs)
scaffold0127 (21-149)||(12714-12841)
[»] scaffold0031 (1 HSPs)
scaffold0031 (28-132)||(79508-79615)
[»] scaffold0045 (1 HSPs)
scaffold0045 (27-132)||(85549-85657)
[»] scaffold0011 (1 HSPs)
scaffold0011 (21-132)||(35909-36023)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-126)||(80175-80283)
[»] scaffold0154 (1 HSPs)
scaffold0154 (21-128)||(11335-11445)
[»] scaffold0468 (1 HSPs)
scaffold0468 (29-131)||(1509-1609)
[»] scaffold1899 (1 HSPs)
scaffold1899 (87-132)||(1-46)
[»] scaffold0339 (1 HSPs)
scaffold0339 (30-126)||(4317-4415)


Alignment Details
Target: chr3 (Bit Score: 124; Significance: 7e-64; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 38890314 - 38890441
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38890314 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 38890413  T
Q  103 acacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||||||||    
T  38890414 acacatcaagttgttattggtgtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 11168375 - 11168503
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11168375 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 11168474  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  11168475 acacatcaagttgttattggtgtgatttt 11168503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 10956010 - 10955883
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10956010 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 10955912  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  10955911 acacatcaagttgttattggtgtgatttt 10955883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 10191295 - 10191152
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  10191295 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtcccatacactttg-ttttggttgcttgattatcccttgctcc 10191197  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||    
T  10191196 acacatcaagttgttattggtgtga-ttttcatcagattcgcaaca 10191152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 5191925 - 5192052
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  5191925 ttctcttctttgtgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 5192023  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  5192024 acacatcaagttgttattggtgtgatttt 5192052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 10084372 - 10084245
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  10084372 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtcccatacactttg-ttttggttgcttgattatcccttgctcc 10084274  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  10084273 acacatcaagttgttattggtgtgatttt 10084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 10958306 - 10958179
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||    
T  10958306 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttctatacactttg-ttttggttgcttgattatctcttgctcc 10958208  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  10958207 acacatcaagttgttattggtgtgatttt 10958179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 38210647 - 38210789
Alignment:
Q  5 ctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||| ||||||||||||||    
T  38210647 ctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttgtttgtttgataatcccttgctccac 38210745  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  38210746 acatcaagttgttattggtgtgatttttcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 1321753 - 1321881
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  1321753 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcctgattatcccttgctcc 1321851  T
Q  103 acacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||||| |||||||||||||||||||    
T  1321852 acacatcaagtttgttattggtgtgatttt 1321881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 51726990 - 51726863
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||  ||||| ||    
T  51726990 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattat-tcttgcccc 51726892  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  51726891 acacatcaagttgttattggtgtgatttt 51726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 747035 - 747177
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||    || ||||| |||||||||||||||||||||||||||||||||||||    
T  747035 tcttctttgtgttcttctcgcagttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccaca 747134  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  747135 catcaagttgttattggtgtgatttttcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 50494277 - 50494417
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||    
T  50494277 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttggttgcttaattatctcttgctccaca 50494374  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  50494375 catcaagttgttattggtgtgatttttcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 6065774 - 6065632
Alignment:
Q  7 cttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacac 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| |||||||||||||||||| |||||||||||||||||||    
T  6065774 cttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttaattatcccttgctccacac 6065675  T
Q  107 atcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||| |||  |||| ||||||    
T  6065674 atcaagttgttattggtgtgatttttcatcgaattcgcaacaa 6065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 25533707 - 25533843
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||    
T  25533707 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttga-tatctcttgctccacacatca 25533804  T
Q  111 agttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||| |||  |||| ||||||    
T  25533805 agttgttattggtgtgatttttcatcgaattcgcaacaa 25533843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 456185 - 456309
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||||||||||||||||||||||||||    
T  456185 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttg-ttttggttgcttgattatcccttgctccaca 456283  T
Q  106 catcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||    
T  456284 catcaagttgttattggtgtgatttt 456309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 458562 - 458686
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||||||||||||||||||||||||||    
T  458562 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttg-ttttggttgcttgattatcccttgctccaca 458660  T
Q  106 catcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||    
T  458661 catcaagttgttattggtgtgatttt 458686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 5522610 - 5522482
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || | ||| |||||||||||||||||||| |||||||||||||    
T  5522610 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcttacactttgattttggttgcttgactatcccttgctcc 5522511  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  5522510 acacatcaagttgttattggtgtgatttt 5522482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 53894036 - 53893905
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgtttt-ctacttttggctt-gtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcca 103  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  53894036 tcttctttgtgttcttctcgccgttgtttttctacttttggctttgtatttaattattccatacactttg-ttttggttgcttgattatcccttgctcca 53893938  T
Q  104 cacatcaagttgttattggtgtgatttttgatc 136  Q
    |||||||||||||||||||||||||||| ||||    
T  53893937 cacatcaagttgttattggtgtgattttcgatc 53893905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 6063424 - 6063282
Alignment:
Q  7 cttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacac 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||| ||||||||||| |||||||    
T  6063424 cttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgttccacac 6063325  T
Q  107 atcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||| |||||||||||| |||  |||| ||||||    
T  6063324 atcaagttgttatcggtgtgatttttcatcgaattcgcaacaa 6063282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 10621509 - 10621365
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgcttt-gattttggttgcttgattatcccttgctccac 104  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| |||| | |||||||||||| |||||||||||||||||    
T  10621509 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttggtttttggttgcttaattatcccttgctccac 10621410  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||| |||  |||||||||||    
T  10621409 acatcaagttgttattggtgtgatttttcatcgaattcacaacaa 10621365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 25389179 - 25389309
Alignment:
Q  3 ttctcttcttt-gtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgct 100  Q
    ||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  25389179 ttctcttcttttgtattcttctcgccgttgttttctactttttggcttgtatttaattattccatacactttg-ttttggttgcttgattatcccttgct 25389277  T
Q  101 ccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||| ||||||||    
T  25389278 ccacacatcaagttgttattggtatgattttt 25389309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 7606580 - 7606465
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc 109  Q
    ||||||||| |||||| |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  7606580 tttgtgttcttctcgctgttgttttctactttttggcctgtatttaattgttccatacactttgattttggttgcttgactatctcttgctccacacatc 7606481  T
Q  110 aagttgttattggtgt 125  Q
    ||||||||||||||||    
T  7606480 aagttgttattggtgt 7606465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 11170670 - 11170772
Alignment:
Q  29 ttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||    
T  11170670 ttgttttctacttttggcttgtatttaattattccatacactttgattttggttgcttgattatcccttactccacacatcaagttgttattaatgtgat 11170769  T
Q  129 ttt 131  Q
    |||    
T  11170770 ttt 11170772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 22114288 - 22114159
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||    || ||||| |||||||||||||||||||||||||||||||||    
T  22114288 ttctcttttttgtgttcttctcgccgttttttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctc 22114189  T
Q  102 cacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||| |||||||||||||||    
T  22114188 cacacatcaagttgctattggtgtgatttt 22114159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 18099140 - 18099009
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  18099140 tctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtttgtt 18099041  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||| |||  |||| ||||||    
T  18099040 attggtgtgatttttcatcgaattcccaacaa 18099009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 3859792 - 3859934
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgta-tttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc 109  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||| | ||||||||  ||||||||||    
T  3859792 tttgtgttcttctcgccgttgttttctacttttggcttgtattttaattgtttcatacactttg-ttttggttgcttaactatcccttattccacacatc 3859890  T
Q  110 aagttgttattggtgtga-tttttgatcagattcacaacaagaa 152  Q
    |||||||||||||||||| |||| ||||  ||||||||||||||    
T  3859891 aagttgttattggtgtgacttttcgatcgaattcacaacaagaa 3859934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 32219372 - 32219486
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32219372 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagtttgtt 32219471  T
Q  118 attggtgtgattttt 132  Q
    ||| |||||||||||    
T  32219472 atttgtgtgattttt 32219486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 43228578 - 43228687
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattt-aattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttat 119  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  43228578 tctcgctgttgttttctaattttggcttgtattttaattgttccatacactttg-ttttggttgcttgattatctcttgctccacacatcaagttgttat 43228676  T
Q  120 tggtgtgattt 130  Q
    |||||||||||    
T  43228677 tggtgtgattt 43228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 28413010 - 28412869
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||    || ||||| |||   |||||||| ||||||||||||||||||||||    
T  28413010 tcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttataactttcatacacttg--ttttggttacttgattatcccttgctccaca 28412913  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||| ||||| |||  |||||||||||    
T  28412912 catcaagttgttattggtgtgttttttcatcgaattcacaacaa 28412869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 18096870 - 18096756
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18096870 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 18096771  T
Q  118 attggtgtgattttt 132  Q
    |||||||| ||||||    
T  18096770 attggtgtaattttt 18096756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 40750717 - 40750805
Alignment:
Q  149 agaacaatgactacaaatgatactccaacttaaatgcaaaaaagaacacacaatatatataaggaagcgtctataatttattctcttcta 238  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  40750717 agaacaatgaatacaaatgatactccaacttaaatgcaaaaaagaacacacaatatatataaggaagcatcta-aatttattctcttcta 40750805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 41849351 - 41849454
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41849351 cgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 41849449  T
Q  127 atttt 131  Q
    |||||    
T  41849450 atttt 41849454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 24980007 - 24980126
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |    
T  24980007 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgtt 24980106  T
Q  129 ttttgatcagattcacaaca 148  Q
    || | |||  ||||||||||    
T  24980107 ttctcatcgaattcacaaca 24980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 26720821 - 26720928
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||    |||||||| ||||| ||||||||||||||||||||||||||||    
T  26720821 ttctcttctttgtgttcttctcgtcgttcttttctacttttggcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttgctcc 26720919  T
Q  103 acacatcaa 111  Q
    |||||||||    
T  26720920 acacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 5886496 - 5886600
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||| ||| |||||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5886496 gttgttttctacttttggcttgtgattataactgttccatacactttg--tttggttgcttgtttatcccttgctccacacatcaagttgttattggtgt 5886593  T
Q  126 gattttt 132  Q
    |||||||    
T  5886594 gattttt 5886600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 5899969 - 5900073
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||| ||| |||||||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5899969 gttgttttctacttttggcttgtgattataactgttccatacactttg--tttggttgcttgtttatcccttgctccacacatcaagttgttattggtgt 5900066  T
Q  126 gattttt 132  Q
    |||||||    
T  5900067 gattttt 5900073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 42990591 - 42990701
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttat 119  Q
    |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  42990591 tctcgccgttgttttctacttttggcttgtatttataacttacatacactttg-ttttggttgcctgattatcccttgctccacacatcaagtttgttat 42990689  T
Q  120 tggtgtgatttt 131  Q
    ||||||||||||    
T  42990690 tggtgtgatttt 42990701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 43226381 - 43226477
Alignment:
Q  33 tttctacttttggcttgtattt-aattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 130  Q
    |||||||||||||||||||||| ||||||||||||| |||   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43226381 tttctacttttggcttgtattttaattgttccatacacttg--ttttggttgcttgattatctcttgctccacacatcaagttgttattggtgtgattt 43226477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 4308251 - 4308143
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||| | |||||| |||||||||||||||||||||||||    
T  4308251 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg-ttttggttgttggattattccttgctccacacatcaagttgtta 4308153  T
Q  119 ttggtgtgat 128  Q
    ||||||||||    
T  4308152 ttggtgtgat 4308143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 27635618 - 27635515
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  27635618 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 27635520  T
Q  127 atttt 131  Q
    |||||    
T  27635519 atttt 27635515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 36012114 - 36012227
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||||||||||||||| |||||| ||||  |||||||||||| ||||| ||||||||| ||||||||||||||||||| |||||||| |||||    
T  36012114 tctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttg-ttttggttgtttgattatcccttgctccatacatcaagtttgtt 36012212  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  36012213 attggtgtgattttt 36012227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 53917635 - 53917522
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  53917635 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgtt 53917537  T
Q  118 attggtgtgattttt 132  Q
    ||| |||||||||||    
T  53917536 attagtgtgattttt 53917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 18162960 - 18163081
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtga 127  Q
    |||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||||||| ||||||||||| || || ||||||||||||    
T  18162960 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtga 18163059  T
Q  128 tttttgatcagattcacaacaa 149  Q
    ||||| |||  ||||| |||||    
T  18163060 tttttcatcgaattcataacaa 18163081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 1313698 - 1313805
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  1313698 cgttgttttctacttttgacttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggt 1313796  T
Q  124 gtgattttt 132  Q
    |||| ||||    
T  1313797 gtgagtttt 1313805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 28101965 - 28101847
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    |||||||||||||||| |||| |||||||| |  || | |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||    
T  28101965 tgttttctacttttgggttgtgtttaattgct--atccactttgattttggttgcttgattatcccttgctccacacatcaagtttattattggtgtaat 28101868  T
Q  129 ttttgatcagattcacaacaa 149  Q
    |||| |||  |||||||||||    
T  28101867 ttttcatcgaattcacaacaa 28101847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 35919107 - 35919018
Alignment:
Q  11 tttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgc 99  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  35919107 tttgtgttcttctcgccgttgtttttctacttttggcttctatttaattgttccatacactttgattttggttgtctgattatcccttgc 35919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 3314979 - 3315078
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||| |||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  3314979 tgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtg 3315078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 43423428 - 43423307
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa-gttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||  |||||||||||||     
T  43423428 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaactttgttattggtgta 43423330  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||  |||| ||||||    
T  43423329 atttttcatcgaattcgcaacaa 43423307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 53915467 - 53915354
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||| ||| | |||||||||||||| |||||||||||||| |||||||| |||||    
T  53915467 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttgg-ttttggttgcttgactatcccttgctccatacatcaagtttgtt 53915369  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  53915368 attggtgtgattttt 53915354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 6484652 - 6484757
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||  |||||||||||| |||||||||||||||||| ||||| |||||||||||||||| || |||||||| |||||    
T  6484652 tgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacacatcaaatttgttattagtgtg 6484751  T
Q  127 attttt 132  Q
    ||||||    
T  6484752 attttt 6484757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 25688121 - 25688016
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||| ||||||||||||||    
T  25688121 tgttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttgctccacacataaagtttgttattggtgtg 25688022  T
Q  127 attttt 132  Q
    | ||||    
T  25688021 agtttt 25688016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 27101144 - 27101043
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgt 125  Q
    |||||||||||||||| |||||| ||| |||||||||||||| ||||| |||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  27101144 gttgttttctactttttgcttgtgattataattgttccatacactttg-ttttggttgcctgattattcattgctccacacatcaagttgttattggtgt 27101046  T
Q  126 gat 128  Q
    |||    
T  27101045 gat 27101043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 28181298 - 28181417
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||    
T  28181298 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgattgtcc-ttgctccacacatcaagtttgttattggtgtg 28181395  T
Q  127 atttttgatcagattcacaaca 148  Q
    ||||||| ||  ||||||||||    
T  28181396 atttttgttcgaattcacaaca 28181417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 9604575 - 9604463
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| ||||||||||| ||||||| ||| ||| |||||||| ||||| ||||| ||| |||| ||||||||| |||||||||||||||||||||||||    
T  9604575 tctcgctgttgttttctatttttggcctgtgattataattgtttcatacactttggttt-ggttacttgattattccttgctccacacatcaagttgtta 9604477  T
Q  119 ttggtgtgattttt 132  Q
    ||||||||||||||    
T  9604476 ttggtgtgattttt 9604463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 45883237 - 45883341
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||| |||||||| ||| |||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  45883237 tgttttctacttctggcttgtgattataattgttccatacactttg-ttttggttgcttaactatcccttgctccacacatcaagtttgttattggtgtg 45883335  T
Q  127 attttt 132  Q
    ||||||    
T  45883336 attttt 45883341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12267942 - 12267835
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| ||| || ||||||||||||| || |||||||||||    
T  12267942 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactattccctgctccacacatcaaatttgttattggt 12267844  T
Q  124 gtgattttt 132  Q
    || ||||||    
T  12267843 gtaattttt 12267835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 43421380 - 43421259
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa-gttgttattggtgtg 126  Q
    |||||| |||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| |||  |||||||||||||||||  ||||||||||||||    
T  43421380 tgttttatacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatatcttgctccacacatcaactttgttattggtgtg 43421282  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||  |||| ||||||    
T  43421281 atttttcatcgaattcgcaacaa 43421259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 51943667 - 51943752
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||||||||| ||||  ||||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||    
T  51943667 tgttttctacttttggcttgtgtttataattgttccaaacactttg-ttttggttgcttgactatcccttgctccacacatcaagtt 51943752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 32264001 - 32263897
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||  |||||||| ||||||||||||||| || |||||||| |||||    
T  32264001 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtctgattatcacttgctccacacatcaaatttgttattagtgtg 32263903  T
Q  127 attttt 132  Q
    ||||||    
T  32263902 attttt 32263897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 880416 - 880312
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||| |||| ||| ||| |||||||||| ||||| |||||||||||||||||  ||||||||||||||||||| ||||||| ||||||    
T  880416 tgttttctacttttggtttgtgattataactgttccatacactttg-ttttggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtg 880318  T
Q  127 attttt 132  Q
    ||||||    
T  880317 attttt 880312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 4103879 - 4103752
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||| |||||||| | ||||||||    |||||||| ||||  ||| ||||| |||| ||| |||||||||    
T  4103879 ttctcttctttgtgttcttctcgccgttgttttttacttttgacatgtatttataacttccatacacttt-ttttcggttgtttgactat-ccttgctcc 4103782  T
Q  103 acacatcaag-ttgttattggtgtgatttt 131  Q
    || ||||||| |||||||||||||||||||    
T  4103781 acgcatcaagtttgttattggtgtgatttt 4103752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 15781170 - 15781293
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  | |||||||||| |||| ||||||  |||||||||||||||| |||||||||||||| |||||||||||    
T  15781170 cgttgttttctacttttgacttgtgtttataactgttccatacacttt-attttgcctgcttgattatcccttactccacacatcaagtttgttattggt 15781268  T
Q  124 gtgatttttgatcagattcacaaca 148  Q
    ||| ||||  |||  ||||||||||    
T  15781269 gtgtttttccatcgaattcacaaca 15781293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 31151667 - 31151755
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||| ||||| ||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||| |||  |||||||||||    
T  31151667 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtatttattggtgtgatttttcatcgaattcacaacaa 31151755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 1626649 - 1626543
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||  ||||||| ||||| ||||  |||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  1626649 cgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttg-ttgcttgattattccttgctccacacatcaagtttgttattggt 1626551  T
Q  124 gtgatttt 131  Q
    ||| ||||    
T  1626550 gtggtttt 1626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 3307054 - 3307176
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgt 125  Q
    ||||||||||||||||||||| ||||  |||||| ||||| ||||| ||||| ||| |||||||||||||||| || ||||||||  |||||||||||||    
T  3307054 tgttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgt 3307153  T
Q  126 gatttttgatcagattcacaaca 148  Q
    | ||| | |||  ||||||||||    
T  3307154 gttttctcatcgaattcacaaca 3307176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 54691538 - 54691416
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgt 125  Q
    ||||||||||||||||||||||| ||||  |||||| |||||  |||| |||||||||| |||||||| |||||||||||||| || ||||||||| |||    
T  54691538 gttgttttctacttttggcttgtgtttataattgtttcatacattttg-ttttggttgcctgattatcacttgctccacacataaatttgttattgatgt 54691440  T
Q  126 gatttttgatcagattcacaacaa 149  Q
    | ||| | |||  |||||||||||    
T  54691439 gttttctcatcgaattcacaacaa 54691416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 23633745 - 23633863
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatt 129  Q
    |||||||||||| |||||||| ||||    |||||||| ||||| |||||||||||||||| || |||||| |||||||| |||  ||||||||||||||    
T  23633745 tgttttctacttgtggcttgtgtttataaattccatacactttg-ttttggttgcttgattttcacttgcttcacacatctagtatttattggtgtgatt 23633843  T
Q  130 tttgatcagattcacaacaa 149  Q
    ||| |||  |||||||||||    
T  23633844 tttcatcgaattcacaacaa 23633863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 28761407 - 28761287
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||| |||||  |||    |||||||| |||| |||||||||| ||||||||| |||||||||||||||||| || ||||||||||    
T  28761407 cgttgttttctacttttg-cttgtgattataatttccatacacttt-attttggttgtttgattatcacttgctccacacatcaagattattattggtgt 28761310  T
Q  126 gatttttgatcagattcacaaca 148  Q
    ||||||| |||  ||||||||||    
T  28761309 gatttttcatcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 36957651 - 36957703
Alignment:
Q  79 ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  36957651 ggttgcttgattatcccttgctccacacatcaagttgttattgatatgatttt 36957703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 47148861 - 47148745
Alignment:
Q  27 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||  |||||||||||||| ||||| ||||||||| |||||||||       |||||||||||| |||||||||||    
T  47148861 cgttgttttctacttttgacttgtgtttataattgttccatacactttg-ttttggttgtttgattatc-------ccacacatcaagtttgttattggt 47148770  T
Q  124 gtgatttttgatcagattcacaaca 148  Q
    |||| |||| |||| ||||||||||    
T  47148769 gtgagttttcatcaaattcacaaca 47148745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 51674729 - 51674626
Alignment:
Q  30 tgttttctacttttggcttgtatttaa--ttgttccatacgct-ttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||||||||| ||||   ||||||||||| |  |||  ||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  51674729 tgttttctacttttggcttgtgtttatatttgttccatacccacttg--tttggttgcttgattattccttgctccatacatcaagtttgttattggtgt 51674632  T
Q  126 gatttt 131  Q
    ||||||    
T  51674631 gatttt 51674626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 47701638 - 47701536
Alignment:
Q  29 ttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||||||| ||  |||||||||||||| ||||| |||| |||||||||||||  |||| |   ||||||||| |||||||||||||    
T  47701638 ttgttttctacttttggcttgtgttcataattgttccatacactttg-ttttcgttgcttgattattacttgat---cacatcaagtttgttattggtgt 47701543  T
Q  126 gattttt 132  Q
    |||||||    
T  47701542 gattttt 47701536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 5926731 - 5926611
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt-gttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||||| ||| ||||| |||||||| ||||||||| |||| || ||||||| ||||| |||||||||    
T  5926731 cgttgttttctacttttg-cttgtgtttataattgttccttacactttg-ttttggttacttgattattccttacttcacacatgaagtttgttattggt 5926634  T
Q  124 gtgatttttgatcagattcacaa 146  Q
    |||| |||| |||  ||||||||    
T  5926633 gtgagttttcatcgaattcacaa 5926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 42992673 - 42992783
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttat 119  Q
    ||||||| ||||||||| |||||| | | ||||||    |||||||| ||||| |||||||||  |||||||||||||||| |||||||||| |||||||    
T  42992673 tctcgccattgttttctgcttttgacatatatttataacttccatacactttg-ttttggttgtctgattatcccttgctctacacatcaagtttgttat 42992771  T
Q  120 tggtgtgatttt 131  Q
    | ||||||||||    
T  42992772 tagtgtgatttt 42992783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 53468414 - 53468313
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||| ||||| ||||  |||||||||||| ||||| |||||| ||||  ||||| | ||||||||||||||||| |||||||||||||| |    
T  53468414 ttttctacttttgacttgtgtttataattgttccatacactttg-ttttggctgctccattattcattgctccacacatcaagtttgttattggtgtggt 53468316  T
Q  129 ttt 131  Q
    |||    
T  53468315 ttt 53468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 48361634 - 48361546
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||| ||||| ||| |||||||||||||| ||||| |||||||||||||||||| | ||| |||| |||| |||||    
T  48361634 cgttgttttctacttttgacttgtgattataattgttccatacactttg-ttttggttgcttgattattcattgttccatacattaagtt 48361546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 53591503 - 53591559
Alignment:
Q  54 taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa 111  Q
    ||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||    
T  53591503 taattgttccatacattttg-ttttggttgcttgattatcccttgttccacacatcaa 53591559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 880208 - 880101
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||||||||||| |||| ||| ||| |||| ||||| ||||| ||||  |||||||||||| |||| |||||||||||||| || ||||||||    
T  880208 cgttgttttctacttttggtttgtgattataactgtttcatacactttg-ttttctttgcttgattattccttactccacacatcaagtttattattggt 880110  T
Q  124 gtgattttt 132  Q
    |||| ||||    
T  880109 gtgactttt 880101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 4666808 - 4666926
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    |||||| ||||||||| |||| ||||  |||||| ||||| |||| ||||||||||| |||| ||| ||| ||||||||||| || || |||||||||||    
T  4666808 tgttttatacttttggtttgtttttataattgtttcatacacttt-attttggttgcatgataatcacttactccacacatcaaatttattattggtgtg 4666906  T
Q  127 atttttgatcagattcacaa 146  Q
    ||||||  ||| ||||||||    
T  4666907 atttttcttcaaattcacaa 4666926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 561739 - 561640
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgat 128  Q
    ||||||||||||||| ||||| ||||    |||||||| |||||  |||||||||||||||||  ||| ||||||||||||||| | |||||||||||||    
T  561739 tgttttctacttttg-cttgtgtttataacttccatacactttg--tttggttgcttgattattacttactccacacatcaagtattttattggtgtgat 561643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 17795594 - 17795669
Alignment:
Q  74 attttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||| ||||  |||||||||||||| || || ||||||||||||||||| |||  ||||||||||    
T  17795594 attttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaaca 17795669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 19104034 - 19104109
Alignment:
Q  74 attttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||| ||||  |||||||||||||| || || ||||||||||||||||| |||  ||||||||||    
T  19104034 attttggttgcttgactatcagttgctccacacatcaaatttattattggtgtgatttttcatcgaattcacaaca 19104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 25635718 - 25635772
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||  |||||||||||||||||||  ||||| ||||||||||    
T  25635718 ttggttgcttgattattacttgctccacacatcaagtatttattagtgtgatttt 25635772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 42992557 - 42992591
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta 55  Q
    |||||||||||||||||||||||||||||||||||    
T  42992557 tctcgccgttgttttctacttttggcttgtattta 42992591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 36871222 - 36871166
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||| | ||||||||||||||||||  |||| ||||||||||||    
T  36871222 ttttggttgcttgattattc-ttgctccacacatcaagtatttatcggtgtgattttt 36871166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 35917937 - 35917893
Alignment:
Q  88 attatcccttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||    
T  35917937 attatcccttgttccatacatcaagttgttattggtgtaattttt 35917893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 25634224 - 25634278
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||  |||||||| ||||| ||||  ||||||||||||||||    
T  25634224 ttggttgcttgattattacttgctccccacattaagtatttattggtgtgatttt 25634278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 6232119 - 6232192
Alignment:
Q  54 taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgatttt 131  Q
    |||||||||||||| |||| ||||||||||||||||||    || ||||||||||| || |||||||| ||||||||||    
T  6232119 taattgttccatacacttt-attttggttgcttgatta----ttactccacacatcaaatttgttattagtgtgatttt 6232192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 47177659 - 47177802
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  47177659 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgattttggttgcttaattatcccttgctccaca 47177758  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  47177759 catcaagttgttattggtgtgatttttgatcgaattcacaacaa 47177802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 47180010 - 47180152
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  47180010 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttgattttgattgcttaattatcccttgctccaca 47180109  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  47180110 catcaagttgttattggtgtgatttttgatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 10399815 - 10399690
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  10399815 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctcc 10399716  T
Q  103 acacatcaagttgttattggtgtgat 128  Q
    ||||||||||||||||||||||||||    
T  10399715 acacatcaagttgttattggtgtgat 10399690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 51750333 - 51750461
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  51750333 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 51750431  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||    
T  51750432 acacatcaagttgttattggtgtgattttt 51750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 13762130 - 13762257
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  13762130 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatccctttctcc 13762228  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  13762229 acacatcaagttgttattggtgtgatttt 13762257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 15294821 - 15294694
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  15294821 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 15294723  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  15294722 acacatcaagttgttattggtgtgatttt 15294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 20291750 - 20291878
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||    
T  20291750 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctcc 20291849  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  20291850 acacatcaagttgttattggtgtgatttt 20291878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 13447260 - 13447133
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  13447260 ttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 13447162  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  13447161 acacatcaagttgttattggtgtgatttt 13447133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 16226465 - 16226608
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| |||||||||||||||||||||||||||||||||||||    
T  16226465 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccaca 16226564  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||| |||  |||||||||||    
T  16226565 catcaagttgttattggtgtgatttttcatcgaattcacaacaa 16226608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 46431693 - 46431547
Alignment:
Q  3 ttctcttcttt-gtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  46431693 ttctcttcttttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttg-ttttggttgcttgattatctcttgctc 46431595  T
Q  102 cacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    || |||||||||||||||||||||||||||| |||  |||| ||||||    
T  46431594 caaacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 46431547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 23786137 - 23786278
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  23786137 tcttcttt-tgttcttctcgccgttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgctccac 23786234  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  23786235 acatcaagttgttattggtgtgatttttcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 16231860 - 16232002
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| |||||||||||||||||||||||||| ||||||||||    
T  16231860 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatccgttgctccaca 16231959  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  16231960 catcaagttgttattggtgtgatttttcatcgaattcacaaca 16232002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 20302743 - 20302863
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||| ||||||    
T  20302743 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctccagacatca 20302842  T
Q  111 agttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||    
T  20302843 agttgttattggtgtgatttt 20302863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 31735508 - 31735383
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  31735508 ttctcttctttgtgttcttctcgccgttgttttcta-ttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 31735411  T
Q  103 acacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||| ||||    
T  31735410 acacatcaagttgttattggtgtaattt 31735383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 51757824 - 51757974
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-----ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatccctt 97  Q
    ||||||||||||||||| |||||||||||||||     |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  51757824 ttctcttctttgtgttcttctcgccgttgtttttttccctacttttggcttgtattcaattgttccatacactttg-ttttggttgcttgattatccctt 51757922  T
Q  98 gctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||| |||||| |||  |||||||||||    
T  51757923 gctccacacatcaagttgttattggtgtcatttttcatcgaattcacaacaa 51757974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 2617829 - 2617939
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttatt 120  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2617829 tctcgctgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaagttgttatt 2617928  T
Q  121 ggtgtgatttt 131  Q
    |||||| ||||    
T  2617929 ggtgtggtttt 2617939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 9459416 - 9459277
Alignment:
Q  8 ttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacaca 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||||||||||||||||||||||||    
T  9459416 ttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacaca 9459318  T
Q  108 tcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||| |||  ||||||||||    
T  9459317 tcaagttgttattggtgtgatttttcatcgaattcacaaca 9459277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 9463243 - 9463104
Alignment:
Q  8 ttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacaca 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||||||||||||||||||||||||    
T  9463243 ttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacaca 9463145  T
Q  108 tcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||| |||  ||||||||||    
T  9463144 tcaagttgttattggtgtgatttttcatcgaattcacaaca 9463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 13358867 - 13358995
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| |||||||||||||||||||| |||||||| ||||    
T  13358867 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttactcc 13358966  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  13358967 acacatcaagttgttattggtgtgatttt 13358995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 24325960 - 24326101
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||| |||||||||| ||| |||| |||||||||||||||||||||| |||| | |||||||||||||||||||||| |||||||    
T  24325960 tcttctttgtgttcttctcaccgttgttttttacctttgacttgtatttaattgttccatacacttt-actttggttgcttgattatcccttactccaca 24326058  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  24326059 catcaagttgttattggtgtgatttttcatcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 39932368 - 39932514
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    |||||||| ||||| |||||||||||||||||||||||||||    
T  39932368 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttgctc 39932466  T
Q  102 cacacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||| |||||||||||||||||||| |||  ||||||||||    
T  39932467 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 39932514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 28842788 - 28842915
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||| ||||    
T  28842788 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttactcc 28842886  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||| ||||||||||    
T  28842887 acacatcaagttgttattagtgtgatttt 28842915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 2510321 - 2510202
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||| ||||| |||| |||||||||||||| |||||| |||| ||||    
T  2510321 tttgtgttcttctcgccgttgttttctatttttgacttgtttttaattgttccatacactttg-ttttcgttgcttgattatctcttgcttcacatatca 2510223  T
Q  111 agttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||    
T  2510222 agttgttattggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 28840973 - 28841088
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||    
T  28840973 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctcc 28841071  T
Q  103 acacatcaagttgttat 119  Q
    || ||||||||||||||    
T  28841072 actcatcaagttgttat 28841088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 27336914 - 27336800
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  27336914 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 27336815  T
Q  118 attggtgtgattttt 132  Q
    |||| ||||||||||    
T  27336814 attgatgtgattttt 27336800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 51752657 - 51752789
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt------ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatccct 96  Q
    ||||||||||||||||| |||||||||||||||      |||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||    
T  51752657 ttctcttctttgtgttcttctcgccgttgtttttttttcctacttttggcttgtattcaattgtttcatacactttg-ttttggttgcttgattatccct 51752755  T
Q  97 tgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||| ||||| ||||||||||||||||    
T  51752756 tgctccacacat-aagttattattggtgtgatttt 51752789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 2949199 - 2949079
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2949199 tgttttctacttttggcttgtgtttataattgttccatacacttt-attttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtg 2949101  T
Q  127 atttttgatcagattcacaaca 148  Q
    |||||| |||  ||||||||||    
T  2949100 atttttcatcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 23816195 - 23816307
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| ||||||||||||||||| ||||| ||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  23816195 tctcgctgttgttttctacttttgacttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagttgtta 23816293  T
Q  119 ttggtgtgattttt 132  Q
    ||||||||||||||    
T  23816294 ttggtgtgattttt 23816307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 47906576 - 47906688
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  47906576 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttggttt-ggttgcttgattatctcttgctccacacatcaagttgtta 47906674  T
Q  119 ttggtgtgattttt 132  Q
    ||||||||||||||    
T  47906675 ttggtgtgattttt 47906688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 28207042 - 28206911
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  28207042 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgtt 28206943  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||| ||| | |||  |||||||||||    
T  28206942 attggtgtgttttctcatcgaattcacaacaa 28206911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 50307519 - 50307388
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| || ||    
T  50307519 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccagacatcaagtttatt 50307420  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||| |||  |||| ||||||    
T  50307419 attggtgtgatttttcatcgaattcccaacaa 50307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 27339105 - 27338991
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  27339105 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgttccacacatcaagtttgtt 27339006  T
Q  118 attggtgtgattttt 132  Q
    |||| ||||||||||    
T  27339005 attgatgtgattttt 27338991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 39462826 - 39462940
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||| ||||||||||| ||||  |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  39462826 tctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttgctccacacatcaagtttgtt 39462925  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  39462926 attggtgtgattttt 39462940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 50078759 - 50078653
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  50078759 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggt 50078661  T
Q  124 gtgatttt 131  Q
    ||||||||    
T  50078660 gtgatttt 50078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 25251244 - 25251123
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  25251244 cgttgttttctacttttggcttgtgattataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggt 25251146  T
Q  124 gtgatttttgatcagattcacaa 146  Q
    ||||||||| |||  ||||||||    
T  25251145 gtgatttttcatcgaattcacaa 25251123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 14097939 - 14097831
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  14097939 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttcacacatcaagtttgttattggt 14097840  T
Q  124 gtgattttt 132  Q
    ||| |||||    
T  14097839 gtgtttttt 14097831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 6995669 - 6995539
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaa--ttgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||   ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| |||||    
T  6995669 tctcgctgttgttttctacttttggcttgtgtttatagttgttccatacactttg-ttttgattgcttgactatcccttgctccacacatcaagtttgtt 6995571  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||| |||  |||| ||||||    
T  6995570 attggtgtgatttttcatcgaattcgcaacaa 6995539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 15823861 - 15823968
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||    
T  15823861 gttgttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtttgttattggtg 15823960  T
Q  125 tgattttt 132  Q
    ||||||||    
T  15823961 tgattttt 15823968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12302475 - 12302367
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||||||||| |||||||||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  12302475 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctccacacatcaagtttgttattggt 12302376  T
Q  124 gtgattttt 132  Q
    ||| |||||    
T  12302375 gtgtttttt 12302367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 9241054 - 9240937
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||| |||||||||  |||||| ||||| ||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||    
T  9241054 tgttttctacttttggtttgtatttataattgtttcatacactttg-ttttggttgcttgattatcacttgctccacacttcaagtttgttattggtgtg 9240956  T
Q  127 atttttgatcagattcaca 145  Q
    |||||| |||  |||||||    
T  9240955 attttttatcgaattcaca 9240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 3579550 - 3579431
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  3579550 tgttttctacttttggcttgtgtttataattgttccatacacttt-attttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 3579452  T
Q  127 atttttgatcagattcacaaca 148  Q
     ||||| |||  ||||||||||    
T  3579451 -tttttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 31490226 - 31490346
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    ||||||||||||||| ||||| ||||  |||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  31490226 tgttttctacttttgacttgtgtttataattgtttcatacacttt-attttggttgcttgattatctcttgctccacacatcaagtttgtattggtgtga 31490324  T
Q  128 tttttgatcagattcacaacaa 149  Q
    ||||| |||  |||| ||||||    
T  31490325 tttttcatcgaattcgcaacaa 31490346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 4131345 - 4131238
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||| ||||||||||| ||||  |||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  4131345 cgttgttttctatttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatctcttgctccgcacatcaagtttgttattggt 4131247  T
Q  124 gtgattttt 132  Q
    |||| ||||    
T  4131246 gtgagtttt 4131238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 50248540 - 50248417
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 123  Q
    |||||||||| |||||||||||||  |||  |||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  50248540 cgttgttttcaacttttggcttgtggttataattgttccatacactttg-ttttggttgcttgattatcccttactccacacatcaaatttgttattggt 50248442  T
Q  124 gtgatttttgatcagattcacaaca 148  Q
    ||||||| | |||  ||||||||||    
T  50248441 gtgatttatcatcgaattcacaaca 50248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 11457442 - 11457338
Alignment:
Q  30 tgttttctacttttggcttgtatttaa--ttgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| |||||  ||||||||||  ||||| |||||||||| |||||||| |||||| ||||||||||| ||||||||||||||    
T  11457442 tgttttctacttttggcttgtgtttaaaattgttccatatactttg-ttttggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtg 11457344  T
Q  127 attttt 132  Q
    ||||||    
T  11457343 attttt 11457338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 18839902 - 18840026
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||| ||||||||||| ||||  |||||||||||| ||||| ||| | || ||||||||| ||||||||||||||||||| ||||||||||||||    
T  18839902 tgttttctagttttggcttgtgtttataattgttccatacactttg-tttcgattacttgattattccttgctccacacatcaagtttgttattggtgtg 18840000  T
Q  127 atttttgatcagattcacaacaagaa 152  Q
    |||||| |||  |||| |||||||||    
T  18840001 atttttcatcgaattcgcaacaagaa 18840026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 28998220 - 28998116
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgatt--ttggttgcttgattatcccttgctccacacatcaag-ttgttattg 121  Q
    |||||||||||||||||||||||| ||||  |||||||||||| ||||||||  |||||||| |||||||| |||||||||||||||||| |||| ||||    
T  28998220 cgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattg 28998121  T
Q  122 gtgtg 126  Q
    |||||    
T  28998120 gtgtg 28998116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 29003936 - 29003832
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgatt--ttggttgcttgattatcccttgctccacacatcaag-ttgttattg 121  Q
    |||||||||||||||||||||||| ||||  |||||||||||| ||||||||  |||||||| |||||||| |||||||||||||||||| |||| ||||    
T  29003936 cgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattg 29003837  T
Q  122 gtgtg 126  Q
    |||||    
T  29003836 gtgtg 29003832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 38925451 - 38925327
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacgctttgatttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    |||||||||||||||||||||| ||||  | |||||||||| |||||||||| |||||| |||||||| ||| |||||||||||||| || |||||||||    
T  38925451 ttgttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactccacacatcaagtttattattggtg 38925352  T
Q  125 tgatttttgatcagattcacaacaa 149  Q
    || ||| | |||| |||||||||||    
T  38925351 tgttttctcatcaaattcacaacaa 38925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 47451943 - 47452066
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    |||| |||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| |||||||||||| ||||||| || ||||||||| ||    
T  47451943 gttgctttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctcgacacatcaaatttgttattgatg 47452041  T
Q  125 tgatttttgatcagattcacaacaa 149  Q
    |||||||| ||   |||||||||||    
T  47452042 tgatttttcattgaattcacaacaa 47452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 13215398 - 13215496
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||| || |||||||||||    
T  13215398 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgactatcccttgctccacacatcaagtttattattggtgtg 13215496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 16429299 - 16429388
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||  |||||||||||    
T  16429299 ttccatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 16429388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 15916706 - 15916821
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||| ||||    |||||||| ||||| |||||||||||||||| |  |||||||||||||||||||  |||||||||||| |||    
T  15916706 ttttctacttttggcttgtgtttataacttccatacactttg-ttttggttgcttgattgttacttgctccacacatcaagtatttattggtgtgacttt 15916804  T
Q  132 tgatcagattcacaaca 148  Q
    | |||  ||||||||||    
T  15916805 tcatcgaattcacaaca 15916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 41647234 - 41647356
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||  ||| || ||||| |||||||||||||||  |||||||| |||||||| ||||||||| ||||||||||||||    
T  41647234 tgttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgtg 41647333  T
Q  127 atttttgatcagattcacaacaa 149  Q
     ||| | |||  |||||||||||    
T  41647334 ttttctcatcgaattcacaacaa 41647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 17186067 - 17185978
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||| ||||| |||||||||||||| |||| ||||||||||| |||||| || ||||||||||||||||| |||| |||||||||||    
T  17186067 ttccatacactttg-ttttggttgcttgactatcacttgctccacatatcaagtttattattggtgtgatttttcatcaaattcacaacaa 17185978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 17324388 - 17324484
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||| ||||  ||| || ||||| ||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  17324388 tgttttctacttttggcttgtgtttataattttttcatacactttg-ttatggttgcttgattattccttgctccacacatcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 25248518 - 25248398
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||| | ||||  |||||| ||||| ||||| |||||||||||||| ||| |||| |||||||||||||| ||||||||| ||||    
T  25248518 tgttttctacttttgacttttgtttataattgtttcatacactttg-ttttggttgcttgactattccttactccacacatcaagtttgttattgttgtg 25248420  T
Q  127 atttttgatcagattcacaaca 148  Q
    |||||| |||  ||||||||||    
T  25248419 atttttcatcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 31424982 - 31424878
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||  ||||| ||||||  |||| || ||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  31424982 tgttttctacttttgacttgtgtttataattgtcccatacattttg-ttatggttgcttgagtattccttgctccacacatcaagtttgttattggtgtg 31424884  T
Q  127 attttt 132  Q
    ||||||    
T  31424883 attttt 31424878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 25860378 - 25860270
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||    |||| ||||||||||||||||||||||| ||| |    
T  25860378 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttgg----ttgactatcccttgctccacacatcaagtttgat 25860284  T
Q  118 attggtgtgatttt 131  Q
    ||||||||| ||||    
T  25860283 attggtgtggtttt 25860270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 148
Target Start/End: Original strand, 17319203 - 17319321
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 128  Q
    ||||||||||||||||||| ||||  | | |||||||| ||||| ||||||||| |||||||| |||| ||||||||||| || |||||||||||| |||    
T  17319203 ttttctacttttggcttgtgtttataactattccatacactttg-ttttggttgtttgattattccttactccacacatcaaatttgttattggtgcgat 17319301  T
Q  129 ttttgatcagattcacaaca 148  Q
    |||| |||  ||||||||||    
T  17319302 ttttcatcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 18307423 - 18307508
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| | ||||||  |||||||||||||||||||    
T  18307423 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcctaattatcatttgctccacacatcaagtt 18307508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 8348991 - 8348904
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||| |||||  |||||||||||||||||  |||| ||||||| ||||||| ||||||||||||||||| |||  |||||||||||    
T  8348991 ttccatacactttg--tttggttgcttgattattacttgttccacacgtcaagtttttattggtgtgatttttcatcgaattcacaacaa 8348904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 40134255 - 40134378
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattat--cccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||   |||    |||||||| ||||| |||||||||| |||||||  | |||||||||||||||||| ||||||||| |    
T  40134255 cgttgttttctacttttggcttgagattataacttccatacactttg-ttttggttgcctgattatatcacttgctccacacatcaagtttgttattgat 40134353  T
Q  124 gtgatttttgatcagattcacaaca 148  Q
    ||||||||| |||  ||||||||||    
T  40134354 gtgatttttcatcgaattcacaaca 40134378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 30780361 - 30780482
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctc--cacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||  |||| ||||  |||||| ||||| ||||| |||||||||||||||||| |||| |||  ||||||||||| |||||||||||||    
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttg-ttttggttgcttgattattccttactccacacacatcaagtttgttattggtgt 30780459  T
Q  126 gatttttgatcagattcacaaca 148  Q
    || |||| |||  ||||||||||    
T  30780460 gagttttcatcgaattcacaaca 30780482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 31422827 - 31422722
Alignment:
Q  30 tgttttctacttttggcttgtattt---aattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||| ||||| |||   |||| |||| ||| |||| ||||| |||| |||||||| ||||||||||||||||||| ||||||||| |||    
T  31422827 tgttttctacttttgacttgtgttttataattattccgtacacttt-attttagttgattgattattccttgctccacacatcaagtttgttattgatgt 31422729  T
Q  126 gattttt 132  Q
    |||||||    
T  31422728 gattttt 31422722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 14183574 - 14183454
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 125  Q
    ||||||||||| |||||| ||||| ||||    |||||||| ||||| ||||||||||||||||||  |||||| |||||||||||| | ||||||||||    
T  14183574 cgttgttttcttcttttg-cttgtgtttataacttccatacactttg-ttttggttgcttgattattacttgcttcacacatcaagtattttattggtgt 14183477  T
Q  126 gatttttgatcagattcacaacaa 149  Q
    ||||||| |||  |||||||||||    
T  14183476 gattttt-atcgaattcacaacaa 14183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 6115074 - 6114989
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||| ||||||||||| ||||||||||    ||||||||  ||| |||||||||||||||||||| ||| |||||||||||||||    
T  6115074 cgttgtcttctacttttgacttgtatttataacttccatacatttt-attttggttgcttgattatcactttctccacacatcaagt 6114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 18800543 - 18800439
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 125  Q
    |||||||||||||||||||||||| ||||    |||||||| ||||| ||||| ||||||||||||   |||||| ||||||||||| | || |||||||    
T  18800543 cgttgttttctacttttggcttgtgtttataacttccatacactttg-ttttgattgcttgattattatttgctctacacatcaagtattttgttggtgt 18800445  T
Q  126 gatttt 131  Q
    ||||||    
T  18800444 gatttt 18800439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 25128227 - 25128272
Alignment:
Q  69 ctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  25128227 ctttgattttggttgcttgattattccttgctctacacatcaagtt 25128272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 13785159 - 13785106
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||| ||||||||||||| ||||||||||||||||| | || |||||||||||    
T  13785159 ttgcttcacacatcaagtttttattggtgtgattttttaacaaattcacaacaa 13785106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 30790337 - 30790266
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    |||||||| ||||| ||||||||||||||||||  |||||| ||||||||| || | ||||||||||||||||    
T  30790337 ttccatacactttg-ttttggttgcttgattattacttgcttcacacatcaggtattttattggtgtgatttt 30790266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 17324546 - 17324495
Alignment:
Q  82 tgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 132  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||| ||||    
T  17324546 tgcttgactatcccttactccacacatcaagtttgttattggtgtgagtttt 17324495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 16428966 - 16429043
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacat 108  Q
    |||||||||||||||| |||| ||||    ||| |||| ||||| |||||||||| |||||||| ||||||||||||||    
T  16428966 tgttttctacttttggtttgtgtttataacttctatacactttg-ttttggttgcctgattatcacttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 16432747 - 16432805
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt 132  Q
    ||||| |||| |||||||  ||||||||||||||| || ||||||||||||||||||||    
T  16432747 ttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgattttt 16432805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 50076643 - 50076563
Alignment:
Q  27 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacac 106  Q
    |||||||||||||||||  ||||| ||  |||||||||||||| ||||| |||| ||||||| ||||| | |||||||||||    
T  50076643 cgttgttttctacttttaacttgtgtttataattgttccatacactttg-ttttagttgctttattattcattgctccacac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 2232872 - 2232908
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  2232872 ttgctccacacatcaagtttttattggtgtggttttt 2232908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 9526743 - 9526778
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||| |||||||||||||||||    
T  9526743 ttgctccacacatcaagtt-ttattggtgtgattttt 9526778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 13125383 - 13125324
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagttgtt-attggtgtgatttttga 134  Q
    ||||||||||||||||||   ||||||||||||||||||  || |||||||||||||||||    
T  13125383 ttttggttgcttgattattt-ttgctccacacatcaagtaatttattggtgtgatttttga 13125324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 34477038 - 34476910
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34477038 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 34476939  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  34476938 acacatcaagttgttattggtgtgatttt 34476910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 34479403 - 34479275
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34479403 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgcatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 34479304  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  34479303 acacatcaagttgttattggtgtgatttt 34479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 3373104 - 3372968
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttatt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3373104 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttatt 3373005  T
Q  121 ggtgtgatttttgatcagattcacaacaagaacaatg 157  Q
    |||||||||||| |||  ||||||||||  |||||||    
T  3373004 ggtgtgatttttcatcgaattcacaacattaacaatg 3372968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 10529083 - 10528955
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |    
T  10529083 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatcccttgcttc 10528984  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  10528983 acacatcaagttgttattggtgtgatttt 10528955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 10749997 - 10750138
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10749997 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 10750095  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||| ||||||||  |||||||||||    
T  10750096 catcaagttgttattggtgtga-ttttgatcgaattcacaacaa 10750138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 10757473 - 10757614
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10757473 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 10757571  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||| ||||||||  |||||||||||    
T  10757572 catcaagttgttattggtgtga-ttttgatcgaattcacaacaa 10757614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 25921458 - 25921333
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25921458 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacacttt-attttggttgcttgattatcccttgctcc 25921360  T
Q  103 acacatcaagttgttattggtgtgatt 129  Q
    |||||||||||||||||||||||||||    
T  25921359 acacatcaagttgttattggtgtgatt 25921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 25804321 - 25804442
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  25804321 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctccaca 25804419  T
Q  106 catcaagttgttattggtgtgat 128  Q
    |||||||||||||||||||||||    
T  25804420 catcaagttgttattggtgtgat 25804442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 2175203 - 2175341
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  2175203 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatca 2175301  T
Q  111 agttgttattggtgtga--tttttgatcagattcacaaca 148  Q
    |||||||||||||||||  |||||||||  ||||||||||    
T  2175302 agttgttattggtgtgacttttttgatcgaattcacaaca 2175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 38882390 - 38882509
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  38882390 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctccacacatca 38882488  T
Q  111 agttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||    
T  38882489 agttgttattggtgtgatttt 38882509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 4236922 - 4237049
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| |    
T  4236922 ttctcttatttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgcttc 4237020  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  4237021 acacatcaagttgttattggtgtgatttt 4237049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 21684437 - 21684310
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  21684437 ttctcttttttgtgttcttctctccgttgttttctacttttggcttttatttaattgttccatacactttg-ttttgattgcttgattatcccttgctcc 21684339  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  21684338 acacatcaagttgttattggtgtgatttt 21684310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 31179358 - 31179213
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtt-ttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| |||||||||||| ||||||||||||||    
T  31179358 ttctcttctttgtgttcttctcgccgttgttcttctacttttggcttgtgtttaattattccatacactttg-ttttggttgcttaattatcccttgctc 31179260  T
Q  102 cacacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    || |||||||||||||||||||||||||||| |||  ||||||||||    
T  31179259 catacatcaagttgttattggtgtgatttttcatcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 31543047 - 31543173
Alignment:
Q  22 ctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattg 121  Q
    ||||||||||||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  31543047 ctcgccgttgttttctacttttggcttgtatttataactttcatacgctttg-ttttggttgcttgattaacccttgctccacacatcaagttgttattg 31543145  T
Q  122 gtgtgatttttgatcagattcacaacaa 149  Q
    |||||||| |||||||||||||||||||    
T  31543146 gtgtgattattgatcagattcacaacaa 31543173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 18469303 - 18469448
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||| ||||| ||||||||||||||||||||||||||||    
T  18469303 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttgctcc 18469401  T
Q  103 acacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||| ||||||||||| |||||||| |||  ||||||||||    
T  18469402 acacatcaagtttgttattggtatgatttttcatcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 18466978 - 18467124
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  18466978 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttg-ttttgattgcttgattatcccttgctcc 18467076  T
Q  103 acacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||| |||||||| ||||||||||| |||  |||||||||||    
T  18467077 acacatcaagtttgttattagtgtgatttttcatcgaattcacaacaa 18467124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 15354530 - 15354413
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15354530 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 15354431  T
Q  132 tgatcagattcacaacaa 149  Q
    |  ||  |||||||||||    
T  15354430 tcgtcgaattcacaacaa 15354413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 15356806 - 15356689
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15356806 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 15356707  T
Q  132 tgatcagattcacaacaa 149  Q
    |  ||  |||||||||||    
T  15356706 tcgtcgaattcacaacaa 15356689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 23665368 - 23665485
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23665368 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 23665467  T
Q  132 tgatcagattcacaacaa 149  Q
    |  ||  |||||||||||    
T  23665468 tcgtcgaattcacaacaa 23665485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 23793219 - 23793102
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23793219 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 23793120  T
Q  132 tgatcagattcacaacaa 149  Q
    |  ||  |||||||||||    
T  23793119 tcgtcgaattcacaacaa 23793102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 23741813 - 23741713
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23741813 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 23741714  T
Q  132 t 132  Q
    |    
T  23741713 t 23741713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 39798332 - 39798469
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  39798332 tttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatca 39798430  T
Q  111 agttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    | |||||||||||||||||||| |||  |||| ||||||    
T  39798431 aattgttattggtgtgatttttcatcgaattcgcaacaa 39798469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 27912830 - 27912973
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    |||||||| ||||| ||||||||||||||||||||||| ||||    
T  27912830 ttctcttctttgtgttcttctcgccgttgttttctacttttagcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttactcc 27912928  T
Q  103 acacatcaag-ttgttattggtgtgatttttgatcagattcacaa 146  Q
    |||||||||| |||||||||||| ||||||| |||  ||||||||    
T  27912929 acacatcaagtttgttattggtgggatttttcatcgaattcacaa 27912973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 31545381 - 31545517
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||    || |||||||||| |||||  ||||||||||| ||||| |||||||    
T  31545381 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgcttt-attttaattgcttgattaacccttactccaca 31545478  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcac 144  Q
    |||||||||||||||||||||||| || |||||||||||    
T  31545479 catcaagttgttattggtgtgattattaatcagattcac 31545517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 4410316 - 4410442
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    |||||| ||||||| || | |||||| ||||||||||||||||||||||||||    |||||||| | ||  ||||||||||||||||||||||||||||    
T  4410316 ttctctactttgtgctcttttcgccgctgttttctacttttggcttgtatttataacttccatacacctt--ttttggttgcttgattatcccttgctcc 4410413  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  4410414 acacatcaagttgttattggtgtgatttt 4410442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 38960092 - 38959988
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38960092 cgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 38959994  T
Q  127 attttt 132  Q
    ||||||    
T  38959993 attttt 38959988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 36402300 - 36402169
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||||||||||||||| |||||| ||||  ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  36402300 tctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgtt 36402201  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||| |||  |||| ||||||    
T  36402200 attggtgtgatttttcatcgaattcgcaacaa 36402169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 27910735 - 27910873
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc- 109  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||||    |||||||| |||| |||||||||| |||||||||||||||||||||||||     
T  27910735 tttgtgttcttctcgccgttgttttatacttttagcttgtatttataacttccatacacttt-attttggttgattgattatcccttgctccacacatca 27910833  T
Q  110 aagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    || |||||||||||||||||||| |||  |||||||||||    
T  27910834 aatttgttattggtgtgatttttcatcgaattcacaacaa 27910873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 41585703 - 41585579
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  41585703 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatctcttgccccacacatcaagtttgttattggt 41585605  T
Q  124 gtgatttttgatcagattcacaacaa 149  Q
    ||||||||| |||  |||||||||||    
T  41585604 gtgatttttcatcgaattcacaacaa 41585579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 10587117 - 10587236
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||    |||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  10587117 tttgtgttcttctcgccgttgttttctacttttgacttgtatttataacttccatacactttg-ttttggttgcttgattat-ccttgctccacacatca 10587214  T
Q  111 ag-ttgttattggtgtgatttt 131  Q
    || |||||||||||||||||||    
T  10587215 agtttgttattggtgtgatttt 10587236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 31465954 - 31465832
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||||| ||||| ||||| |||||||||| || ||||||||||||||    
T  31465954 tgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgttattggtgtg 31465855  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||| |||| ||||||    
T  31465854 atttttcatcaaattcgcaacaa 31465832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 40221843 - 40221964
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  40221843 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcctttgctccacacatcaagtttgttattggtgtg 40221941  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||| ||| |||||||    
T  40221942 atttttcatcaaatttacaacaa 40221964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 2818307 - 2818194
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||||||||||| ||| |||||||||||||||||| |||||||| |||||    
T  2818307 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttgctccatacatcaagtttgtt 2818208  T
Q  118 attggtgtgatttt 131  Q
    ||||||||| ||||    
T  2818207 attggtgtgttttt 2818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 16776466 - 16776578
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtta 118  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  16776466 tctcgctgttgttttctacttttggcttgtattataattgtttcatacactttg-ttttgattgcctgattattccttgctccacacatcaagtttgtta 16776564  T
Q  119 ttggtgtgattttt 132  Q
    ||||||||||||||    
T  16776565 ttggtgtgattttt 16776578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 2724207 - 2724311
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  2724207 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctatacacatcaagtttgttattggtgtg 2724305  T
Q  127 attttt 132  Q
    ||||||    
T  2724306 attttt 2724311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 15552543 - 15552668
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| ||||||| || |||||||||||| |||||||||||    || ||||| ||||| |||| |||||||||||||||||| || |||     
T  15552543 tcttctttgtgttcttctcgccattattttctacttttagcttgtatttataactttcatacactttg-ttttagttgcttgattatcccttacttcacg 15552641  T
Q  106 catcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||    
T  15552642 catcaagttgttattggtgtgattttt 15552668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 34530679 - 34530559
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||| |||||||||| ||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgctttg-ttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtg 34530581  T
Q  127 atttttgatcagattcacaaca 148  Q
    |||||| |||  ||||||||||    
T  34530580 atttttcatcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 17818455 - 17818352
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  17818455 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 17818357  T
Q  127 atttt 131  Q
     ||||    
T  17818356 gtttt 17818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 21289070 - 21289177
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  ||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  21289070 cgttgttttctacttttggcttgtgtttattattcttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgatattggt 21289168  T
Q  124 gtgattttt 132  Q
    |||||||||    
T  21289169 gtgattttt 21289177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 26098251 - 26098147
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  26098251 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgatattggtgtg 26098153  T
Q  127 attttt 132  Q
    | ||||    
T  26098152 agtttt 26098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 36208884 - 36209008
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||| ||||||||| |||| ||||| ||||||||||||||||||| ||||||| |||||||||| || |||||| |    
T  36208884 cgttgttttctacttttggcttgtgattataattgttctatacactttg-ttttggttgcttgattatcacttgctctacacatcaagtttattattgat 36208982  T
Q  124 gtgatttttgatcagattcacaacaa 149  Q
    ||||||||| |||  |||||||||||    
T  36208983 gtgatttttcatcgaattcacaacaa 36209008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12555881 - 12555774
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 123  Q
    |||||||||||||||||||||||| ||| |||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||| || |||||||||||    
T  12555881 cgttgttttctacttttggcttgtgattataattgtttcatacacttt-attttggttgcttgattattccttgctccacacatcaaatttgttattggt 12555783  T
Q  124 gtgattttt 132  Q
    |||| ||||    
T  12555782 gtgagtttt 12555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 21948348 - 21948446
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgatttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21948348 ttttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtg 21948446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 39854791 - 39854905
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||||||| |||||||||||||| ||||  |||||||||||| ||||  |||||||||||| | |||||||||||||||| |||||| || ||    
T  39854791 tctcgctgttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgctccacatatcaagtttatt 39854890  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  39854891 attggtgtgattttt 39854905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 18511185 - 18511074
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||||||||||||||| |||||| ||||  |||||| ||||| ||||| |||| ||||||||| ||||||||||||||||||||||| |||||    
T  18511185 tctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttg-ttttagttgcttgactatcccttgctccacacatcaagtttgtt 18511087  T
Q  118 attggtgtgattt 130  Q
    |||| ||||||||    
T  18511086 attgatgtgattt 18511074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 23667644 - 23667733
Alignment:
Q  33 tttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattgg 122  Q
    ||||||||||||||| |||||||||  ||||||||||||||| ||||||||||| | ||||||| || |||||||||||||||| |||||    
T  23667644 tttctacttttggctcgtatttaatcattccatacgctttgagtttggttgcttaactatccctcgccccacacatcaagttgtgattgg 23667733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 6747611 - 6747721
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttga--ttttggttgcttgattatcccttgctccacacatcaag-ttg 115  Q
    |||||| ||||||||| ||||||||||||| ||||  |||||||||||| |||||   ||||||||||||||||||| ||||||| |||||||||| |||    
T  6747611 tctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctctacacatcaagtttg 6747710  T
Q  116 ttattggtgtg 126  Q
    |||||||||||    
T  6747711 ttattggtgtg 6747721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 24127167 - 24127293
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||| | ||||  |||||| ||||| ||||| |||| ||||  ||||||||||||||||||||||| ||| |||||||| ||    
T  24127167 cgttgttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgctccacacattaagtttgttatttgt 24127266  T
Q  124 gtgatttttgatcagattcacaacaag 150  Q
    ||||||||| |||  ||||||||||||    
T  24127267 gtgatttttcatcgaattcacaacaag 24127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 20505813 - 20505709
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgatttt--ggttgcttgattatcccttgctccacacatcaag-ttgttattg 121  Q
    |||||||||||| ||||||||||| ||||  |||||||||||| ||||||||||  |||||| |||||||  |||||||||||||||||| |||||||||    
T  20505813 cgttgttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtttgttattg 20505714  T
Q  122 gtgtg 126  Q
    |||||    
T  20505713 gtgtg 20505709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 658323 - 658220
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||| | ||||  |||||||| ||| ||||| |||||||||| ||||||| |||||||||||||||| || ||||||||||||||    
T  658323 tgttttctacttttggcttatgtttattattgttccgtacactttg-ttttggttgcctgattattccttgctccacacatcaaatttgttattggtgtg 658225  T
Q  127 atttt 131  Q
    |||||    
T  658224 atttt 658220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 37705747 - 37705644
Alignment:
Q  30 tgttttctacttttggcttgtattt--aattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| |||  |||| |||||||  ||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  37705747 tgttttctacttttggcttgtgtttttaattattccatatactttg-ttttggttgcttggttattccttgctccacacatcaagtttgttattggtgtg 37705649  T
Q  127 atttt 131  Q
     ||||    
T  37705648 gtttt 37705644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 6745375 - 6745485
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgatttt--ggttgcttgattatcccttgctccacacatcaag-ttg 115  Q
    |||||| ||||||||| ||||||||||||| ||||  |||||||||||| ||||| ||||  || ||||||| |||| |||||||||||||||||| |||    
T  6745375 tctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctcttgctccacacatcaagtttg 6745474  T
Q  116 ttattggtgtg 126  Q
    |||||||||||    
T  6745475 ttattggtgtg 6745485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 18509291 - 18509201
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    |||||| ||||||||||||||||||||||| ||||  |||||| ||||| ||||| ||||||||| |||| |||||||||||||||||||||    
T  18509291 tctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 20045297 - 20045395
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||| |||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||  ||||| ||||||||||| |||||||||||    
T  20045297 cgttgttttttacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcatttgcttcacacatcaagtttgttattggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 26098045 - 26098127
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||||| || ||||  |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  26098045 tgttttctacttttggctagtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 1189571 - 1189474
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||||||||| ||||  ||||||||||||  |||| ||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||    
T  1189571 gttttctacttttggcttgtgtttataattgttccatacattttg-ttttggtggcttgattattccttgctccacacatcaagtttgatattggtgtg 1189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 6756806 - 6756905
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgt 125  Q
    ||||||||||||||||||||| ||||  |||||| ||||| ||||| ||||| |||| |||||||| ||||||||||||||||||  |||||||||||||    
T  6756806 tgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttgattgcctgattatcacttgctccacacatcaagttttgttattggtgt 6756904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 18596959 - 18597063
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||  |||||||||||| |||| ||||||| ||  |||||||| ||||||||| |||||||||| ||||||||||||    
T  18596959 tgttttctacttttgacttgtgtttataattgttccatacacttt-attttggatgtctgattatcacttgctccatacatcaagtttgttattggtgtg 18597057  T
Q  127 attttt 132  Q
    ||||||    
T  18597058 attttt 18597063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 17073192 - 17073283
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||| ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||| |||||||||| ||| |||||||||||||||||    
T  17073192 tctcgctgttgttttctacttttgacttgtgtttataattgttccatacactttg-ttttagttgcttgatcatcacttgctccacacatcaa 17073283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 10474285 - 10474203
Alignment:
Q  33 tttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||| |||||| ||||  |||||||||||| ||||| |||||||| ||||||||| |||||||||||||||||||||    
T  10474285 tttctacttttcgcttgtgtttataattgttccatacactttg-ttttggttacttgattattccttgctccacacatcaagtt 10474203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 2954728 - 2954827
Alignment:
Q  30 tgttttctacttttggcttgtatt---taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 125  Q
    ||||||||||||||||||||| ||   |||||||||||||| ||||| |||||||||  |||||||| ||| ||||||||||| || |||||||||||||    
T  2954728 tgttttctacttttggcttgtgttacataattgttccatacactttg-ttttggttgtctgattatcacttactccacacatcaaatttgttattggtgt 2954826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 20043303 - 20043402
Alignment:
Q  30 tgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttga-ttatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||| |||||| ||||||| ||||| ||||||||||| |||||| ||||||||| |||    
T  20043303 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggctgcttgatttatcacttgctccacaaatcaagtttgttattgatgt 20043401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 16092164 - 16092069
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||  ||||  |||||||||||  |||||  ||||||||||||| ||||| |||||||||| |||||| ||||||||||||    
T  16092164 tgttttctacttttggcttgcgtttacaattgttccatatactttg--tttggttgcttgactatccattgctccacatatcaagtttgttattggtg 16092069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 696187 - 696292
Alignment:
Q  28 gttgttttctacttttggct-tgtatttaattgttccatacgctttgattttggttg-cttgattatcccttgctccacacatcaagt-tgttattggtg 124  Q
    |||||||||||||||||  | ||| | ||| |||||||||| |||| |||||||||  |||||||||| ||||||||||||||||||| ||||||||||     
T  696187 gttgttttctacttttgtttgtgtttataactgttccatacacttt-attttggttttcttgattatctcttgctccacacatcaagtctgttattggta 696285  T
Q  125 tgatttt 131  Q
    |||||||    
T  696286 tgatttt 696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 6661156 - 6661053
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 125  Q
    |||||||||||||||||| ||||| ||||    |||||||| |||| |||||||||||||||||||  ||||||||||||||||| | | | ||||||||    
T  6661156 cgttgttttctacttttg-cttgtgtttataacttccatacacttt-attttggttgcttgattattacttgctccacacatcaaatatttaattggtgt 6661059  T
Q  126 gatttt 131  Q
    ||||||    
T  6661058 gatttt 6661053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 25904417 - 25904499
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||||| |||| ||||  |||||||||||| ||||| ||||  |||||||| |||||||||| |||||||||||    
T  25904417 tgttttctacttttggtttgtgtttataattgttccatacactttg-ttttcattgcttgactatcccttgcaccacacatcaa 25904499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 20054193 - 20054251
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 132  Q
    ||||||||||||||||||  ||||||| ||||||||||| | ||||| |||||||||||    
T  20054193 ttttggttgcttgattattacttgctctacacatcaagtattttattagtgtgattttt 20054251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 38394290 - 38394435
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  38394290 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 38394388  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||    
T  38394389 acacatcaagttgttattggtgtgatttttcatcgaattcacaacaa 38394435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 20297666 - 20297811
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  20297666 ttctcctctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 20297764  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||    
T  20297765 acacatcaagttgttattggtgtgatttttcatcgaattcacaacaa 20297811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 20299764 - 20299908
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  20299764 ttctctcctttgtgttcttctcgcagttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 20299862  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||    
T  20299863 acacatcaagttgttattggtgtgatttttcatcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 40836728 - 40836578
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  40836728 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgtttgattatcccttgctcc 40836630  T
Q  103 acacatcaagttgttattggtgtgattttt-gatcagattcacaacaagaac 153  Q
    |||||||||||||||||||||||||||||| ||||  |||| ||||||||||    
T  40836629 acacatcaagttgttattggtgtgatttttcgatcgaattcgcaacaagaac 40836578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 11759431 - 11759576
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  11759431 ttctctcctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 11759529  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||| |||  |||| ||||||    
T  11759530 acacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 11759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 7471965 - 7471837
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  7471965 ttctcttatttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 7471867  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||    
T  7471866 acacatcaagttgttattggtgtgattttt 7471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 25542832 - 25542976
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||    
T  25542832 ttctcttctttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacattttg-ttttgattgcttgattatcccttgctcc 25542930  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||    
T  25542931 acacatcaagttgttattggtgtgatttttcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 28485867 - 28486014
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgct 100  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  28485867 tattctcttctttgtgttcttctatccgttgttttctacttttggcttgtatttaattgttccatacattttg-ttttggttgcttgattatcccttgct 28485965  T
Q  101 ccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||| |||||||||||||||||||||||||| |||  |||||||||||    
T  28485966 ccacatatcaagttgttattggtgtgatttttcatcgaattcacaacaa 28486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 48457957 - 48458084
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  48457957 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 48458055  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  48458056 acacatcaagttgttattggtgtgatttt 48458084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 35933 - 36059
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  35933 ttctcttctttgtgttcttctcgccattgttttctacttttggtttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 36031  T
Q  103 acacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||||||||    
T  36032 acacatcaagttgttattggtgtgattt 36059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 44868 - 44994
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  44868 ttctcttctttgtgttcttctcgccgttgttttctactttttgcttgtatttaattgttccatacactttg-ttttggttgcttgattatccattgctcc 44966  T
Q  103 acacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||||||||    
T  44967 acacatcaagttgttattggtgtgattt 44994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 1606687 - 1606827
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  1606687 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttggttgcttaattatcccttgctccaca 1606784  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  1606785 catcaagttgttattggtgtgatttttcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 28487857 - 28487985
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    |||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  28487857 ttcttttctttgtgttcttctagccgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 28487955  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||    
T  28487956 acacatcaagttgttattggtgtgattttt 28487985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 18345845 - 18345967
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  18345845 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgactatcccttgctcc 18345943  T
Q  103 acacatcaagttgttattggtgtg 126  Q
    ||||||||||||||| ||||||||    
T  18345944 acacatcaagttgttgttggtgtg 18345967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 3036029 - 3036154
Alignment:
Q  4 tctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcca 103  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  3036029 tctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcca 3036127  T
Q  104 cacatcaagttgttattggtgtgattt 130  Q
     ||||||| ||||||||||||||||||    
T  3036128 aacatcaaattgttattggtgtgattt 3036154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 1850285 - 1850411
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| | || | |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  1850285 ttctcttctttgtgttcttttcactgttgttttctacttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctcc 1850383  T
Q  103 acacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||||||||    
T  1850384 acacatcaagttgttattggtgtgattt 1850411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 2935576 - 2935700
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||    
T  2935576 tcttcttt-tgttcttctcgccgttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgcttcac 2935673  T
Q  105 acatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||    
T  2935674 acatcaagttgttattggtgtgatttt 2935700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 7470007 - 7469863
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||    
T  7470007 ttctcttatttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttagttgcttgattatccc-tgctcc 7469910  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||| |||||||||||||||||||| |||  |||| ||||||    
T  7469909 acacatcaaattgttattggtgtgatttttcatcgaattcgcaacaa 7469863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 7094445 - 7094317
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||||| ||| |||||||||    
T  7094445 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccacacacttt-attttggttgcttgactatgccttgctcc 7094347  T
Q  103 acacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||||| |||||||||||||||||||    
T  7094346 acacatcaagtttgttattggtgtgatttt 7094317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 38396938 - 38397070
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-----ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatccctt 97  Q
    ||||||||||||||||| |||||||||||||||     ||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||||||||||    
T  38396938 ttctcttctttgtgttcttctcgccgttgtttttttttctacttttggcttgtatttaattgttctatacactttg-ttttggttgctttattatccctt 38397036  T
Q  98 gctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||||||||||    
T  38397037 gctccacacatcaagttgttattggtgtgatttt 38397070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 43253502 - 43253374
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| |||||| |||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  43253502 ttctcttctttgtgttcttctcgctgttgtttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctc 43253404  T
Q  102 cacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||| |||||||||||||||||||    
T  43253403 cacacatcaaattgttattggtgtgatttt 43253374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 7092198 - 7092070
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||| || |||| ||||||||||||||| |||||||||||||    
T  7092198 ttctcttctttgtgttcttctcgccattgttttctacttttgacttatatttaattgttccacacacttt-attttggttgcttgactatcccttgctcc 7092100  T
Q  103 acacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||||| |||||||||||||||||||    
T  7092099 acacatcaagtttgttattggtgtgatttt 7092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 40550161 - 40550278
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40550161 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 40550260  T
Q  132 tgatcagattcacaacaa 149  Q
    |  ||  |||||||||||    
T  40550261 tcgtcgaattcacaacaa 40550278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 3878881 - 3879009
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||  |||  ||||||||||||||||||| |||||||    
T  3878881 ttctcttctttgtgttcttctcgccgttgtttttctacttttggtttgtatttaattgttccatacatttttgttttggttgcttgattatctcttgctc 3878980  T
Q  102 cacacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||| |||||| ||||||||    
T  3878981 cacacatcaagttattattgatgtgattt 3879009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 7351633 - 7351508
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||| |||||||    
T  7351633 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttaattatcccttactccaca 7351535  T
Q  106 catcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||    
T  7351534 catcaagttgttattggtgtgattttt 7351508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 40946632 - 40946759
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt--ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgct 100  Q
    |||| |||||||||||| |||||||||| ||||  ||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  40946632 ttcttttctttgtgttcttctcgccgtttttttttctatttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgct 40946730  T
Q  101 ccacacatcaagttgttattggtgtgatt 129  Q
    ||||||||||||||||||||| |||||||    
T  40946731 ccacacatcaagttgttattgatgtgatt 40946759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 22137411 - 22137511
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  22137411 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatctcttgctccacacatcaagttgttattggtgtgatttt 22137510  T
Q  132 t 132  Q
    |    
T  22137511 t 22137511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 40552438 - 40552538
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  40552438 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatctcttgctccacacatcaagttgttattggtgtgatttt 40552537  T
Q  132 t 132  Q
    |    
T  40552538 t 40552538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 9027166 - 9027050
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||| ||| |||||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  9027166 tgttcttctagccgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtt 9027068  T
Q  115 gttattggtgtgattttt 132  Q
    ||||||||||||||||||    
T  9027067 gttattggtgtgattttt 9027050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 7349258 - 7349134
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||||    || ||||| |||| ||||||||||||| |||||||||| |||||||    
T  7349258 tcttctttgcgttcttctcgccgttgtttt-tacttttggcttgtatttataactttcatacacttt-attttggttgcttaattatcccttactccaca 7349161  T
Q  106 catcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||    
T  7349160 catcaagttgttattggtgtgattttt 7349134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 13099446 - 13099316
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||| ||||  |||||||||||||||||||||| |||||    
T  13099446 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgacgatcccttgctccacacatcaagtttgtt 13099348  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||| |||  |||||||||||    
T  13099347 attggtgtgatttttcatcgaattcacaacaa 13099316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 20626355 - 20626465
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttatt 120  Q
    |||||| ||||||||||||||||||||| ||||||    |||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||    
T  20626355 tctcgctgttgttttctacttttggcttatatttataacttccatacacttt-attttggttgcttgattatctcttgctccacacatcaggttgttatt 20626453  T
Q  121 ggtgtgattttt 132  Q
    ||||||||||||    
T  20626454 ggtgtgattttt 20626465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 20630246 - 20630356
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttatt 120  Q
    |||||| ||||||||||||||||||||| ||||||    |||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||    
T  20630246 tctcgctgttgttttctacttttggcttatatttataacttccatacacttt-attttggttgcttgattatctcttgctccacacatcaggttgttatt 20630344  T
Q  121 ggtgtgattttt 132  Q
    ||||||||||||    
T  20630345 ggtgtgattttt 20630356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 20642665 - 20642775
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttatt 120  Q
    |||||| ||||||||||||||||||||| ||||||    |||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||||||    
T  20642665 tctcgctgttgttttctacttttggcttatatttataacttccatacacttt-attttggttgcttgattatctcttgctccacacatcaggttgttatt 20642763  T
Q  121 ggtgtgattttt 132  Q
    ||||||||||||    
T  20642764 ggtgtgattttt 20642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 22108401 - 22108484
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttg 115  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22108401 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttg 22108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 1046909 - 1046774
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttg--ttttctac--ttttggcttgtatttaattgttcca-tacgctttg-attttggttgcttgattatccct 96  Q
    ||||||||||||||||| |||||||||||  ||||||||  ||||||||||||||||    ||||| ||| |||||  ||||||||||||||||||| ||    
T  1046909 ttctcttctttgtgttcttctcgccgttgttttttctacctttttggcttgtatttataacttccattacactttgttttttggttgcttgattatctct 1046810  T
Q  97 tgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||||||||    
T  1046809 tgctccacacatcaagttgttattggtgtgattttt 1046774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 1049280 - 1049146
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttg--ttttctac--ttttggcttgtatttaattgttccatacgctttg-attttggttgcttgattatccctt 97  Q
    ||||||||||||||||| ||| |||||||  ||||||||  ||||||||||||||||    || ||||| |||||  ||||||||||||||||||| |||    
T  1049280 ttctcttctttgtgttcttcttgccgttgttttttctacctttttggcttgtatttataactttcatacactttgttttttggttgcttgattatctctt 1049181  T
Q  98 gctccacacatcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||||| ||||    
T  1049180 gctccacacatcaagttgttattggtgtgaatttt 1049146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 9679383 - 9679482
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||  |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  9679383 tgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 9679482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 11355581 - 11355688
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| ||||||| |||||||||||||||| || || |||||||||    
T  11355581 gttgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttattattggtg 11355680  T
Q  125 tgattttt 132  Q
    ||||||||    
T  11355681 tgattttt 11355688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 31435016 - 31434910
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||||| ||| |||| |||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  31435016 cgttgttttctacttttggcttgtgtttataattgttccttacacttt-attttgattgcttgattattccttgctccacacatcaagtttgttattggt 31434918  T
Q  124 gtgatttt 131  Q
    ||||||||    
T  31434917 gtgatttt 31434910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 21678386 - 21678507
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||| ||| ||||| |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||    
T  21678386 tgttttctacttttggcttgtgtttataattgttccttacactttg-ttttggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtg 21678484  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||  |||||||||||    
T  21678485 atttttcatcgaattcacaacaa 21678507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 21990474 - 21990560
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||| ||||||||||||||| ||||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  21990474 tgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtt 21990560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 27306205 - 27306096
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||||||||| |||||||||||| ||| |||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||| |||||    
T  27306205 tctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttg-ttttggttgcttgactatcccttgttccacacatcaagtttgtt 27306107  T
Q  118 attggtgtgat 128  Q
    |||||||||||    
T  27306106 attggtgtgat 27306096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 26804833 - 26804956
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    ||||||||||||||||| ||||| ||||  |||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| || ||||||||||||    
T  26804833 gttgttttctacttttgacttgtgtttataattgttccatacactttg-ttttggttgcttgactatcctttgctccacacatcaaatttgttattggtg 26804931  T
Q  125 tgatttttgatcagattcacaacaa 149  Q
    |||||| | |||| |||| ||||||    
T  26804932 tgatttctcatcaaattcgcaacaa 26804956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 4295899 - 4295797
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||| ||||  ||||||| |||| ||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  4295899 ttttctacttttggcttgtgtttattattgttctatacactttg-ttttggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgat 4295801  T
Q  129 tttt 132  Q
    ||||    
T  4295800 tttt 4295797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 37412090 - 37411983
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||| ||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  37412090 cgttgttttctagttttggcttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgttccacacatcaagtttgttattggt 37411992  T
Q  124 gtgattttt 132  Q
    |||| ||||    
T  37411991 gtgagtttt 37411983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 42330966 - 42330864
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| || ||||||| |||    
T  42330966 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtttattattggcgtg 42330868  T
Q  127 attt 130  Q
    ||||    
T  42330867 attt 42330864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 44724898 - 44725000
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--at-tgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattgg 122  Q
    |||||||||||||||||||||||| ||||  || |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  44724898 cgttgttttctacttttggcttgtgtttataatatgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattgg 44724996  T
Q  123 tgtg 126  Q
    ||||    
T  44724997 tgtg 44725000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 443922 - 444026
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||| ||||||||| |||| ||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  443922 tgttttctacttttggcttgtgattataattgttcaatacactttg-ttttggttgcttgactattccttgctccacacatcaagtttgttattggtgtg 444020  T
Q  127 attttt 132  Q
    | ||||    
T  444021 agtttt 444026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 21680349 - 21680472
Alignment:
Q  27 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||  |||||||||||||| ||||| |||| ||||| ||||||| ||||||| ||||||||||| |||||||||||    
T  21680349 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-tttttgttgcatgattattccttgcttcacacatcaagcttgttattggt 21680447  T
Q  124 gtgatttttgatcagattcacaaca 148  Q
    |||  |||| |||  ||||||||||    
T  21680448 gtgggttttcatcgaattcacaaca 21680472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 22251550 - 22251452
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||| ||||| ||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  22251550 tgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgtttgattatcccttgctcaacacatcaagtttgttattggtgtg 22251452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 42223479 - 42223601
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||| ||||| ||||  ||||||  |||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  42223479 ttgttttctacttttgccttgtgtttataattgttttatacacttt-attttggttgcttgattatcccttactccacacatcaagtttgttattggtgt 42223577  T
Q  126 gatttttgatcagattcacaacaa 149  Q
    | ||||| |||  |||| ||||||    
T  42223578 gtttttttatcgaattcgcaacaa 42223601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 25276449 - 25276550
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||  ||||| ||||||||||  || | ||||||| ||||||||||||||| |  ||| |||||||||||||||||||||||||||    
T  25276449 cgttgttttctactttttacttgtgtttaattgtt--atccactttgatattggttgcttgattaac--ttgatccacacatcaagttgttattggtgtg 25276544  T
Q  127 attttt 132  Q
    ||||||    
T  25276545 attttt 25276550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 9681146 - 9681243
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||||||||||  | |||||| |||| ||||||||||||| ||||||||||||||    
T  9681146 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtg 9681243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 26295765 - 26295885
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||||||||| ||||    || ||||| ||||| ||||| ||||||||||||| | ||||||| |||||||||  |||||||||||    
T  26295765 cgttgttttctacttttggcttgtgtttataattttcatacactttg-ttttgattgcttgattatcacgtgctccatacatcaagtatttattggtgtg 26295863  T
Q  127 atttttgatcagattcacaaca 148  Q
    |||||| ||||  |||||||||    
T  26295864 atttttcatcaatttcacaaca 26295885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 1502883 - 1502832
Alignment:
Q  80 gttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttt 1502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 21592108 - 21592024
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||  |||||||||  |||||||| ||||||||||||||||||||    
T  21592108 tgttttctacttttggcttgtgtttataattgttccatacacttt--ttttggttgtctgattatcacttgctccacacatcaagtt 21592024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 24748946 - 24749017
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  24748946 ttccatacactttg-ttttggttgtttgattatcccttgctccacacatcaagtttgttattggtgtggtttt 24749017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 31155908 - 31155811
Alignment:
Q  8 ttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttg--attttggttgcttgattatcccttgctcca 103  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    || ||||| |||||   |||||||| ||| ||||||||||||||||    
T  31155908 ttctttgtgttcttctcgccgtttttttctacttttggcttgtatttataactttcatacactttgtttttttggtttcttaattatcccttgctcca 31155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 7188861 - 7188980
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga- 127  Q
    ||||||||||||||| ||||| ||||    |||||||| ||||| ||||||||||||||||||  ||||||||||||||||||| | |||||| |||||     
T  7188861 tgttttctacttttg-cttgtgtttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttattgatgtgat 7188958  T
Q  128 tttttgatcagattcacaacaa 149  Q
    |||||||||  |||||||||||    
T  7188959 tttttgatcgaattcacaacaa 7188980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 24465857 - 24465976
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgat 128  Q
    |||||||||||||||| ||||  |||    |||||||| ||||| |||||||||||||| |||| |||| |||||||||| || || |||||||||||||    
T  24465857 tgttttctacttttggtttgtgattataacttccatacactttg-ttttggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgat 24465955  T
Q  129 ttttgatcagattcacaacaa 149  Q
    |||| |||  |||||||||||    
T  24465956 ttttcatcgaattcacaacaa 24465976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 39145954 - 39145856
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||||||||||| |||| ||||  ||||||  ||||  |||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  39145954 cgttgttttctacttttggtttgtgtttataattgtttaatacaatttg-ttttggttgcttgattatcacttactccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 27832606 - 27832487
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgat 128  Q
    |||||||||||||||| ||||  |||    |||||||| ||||| |||||||| |||||||||  | |||||||||||| ||||| ||||||||| ||||    
T  27832606 tgttttctacttttggtttgtgattataacttccatacactttg-ttttggttacttgattatttcctgctccacacattaagtttgttattggtatgat 27832508  T
Q  129 ttttgatcagattcacaacaa 149  Q
    |||| |||  |||||||||||    
T  27832507 ttttcatcgaattcacaacaa 27832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 31153740 - 31153690
Alignment:
Q  99 ctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||||||| |||  |||| ||||||    
T  31153740 ctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 31153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 24813425 - 24813364
Alignment:
Q  71 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    ||||| ||||||||||||||||  ||||||||||||||||||| | |||||| |||||||||    
T  24813425 ttgatattggttgcttgattattacttgctccacacatcaagtattttattgatgtgatttt 24813364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 20137066 - 20137030
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||||||||||| ||||||||||||||||||||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaa 20137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 6349163 - 6349222
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttga 134  Q
    ||||||||||||||||||  ||||||||| || ||||||  |||||||||||| ||||||    
T  6349163 ttttggttgcttgattattacttgctccatacgtcaagtatttattggtgtgagttttga 6349222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 7e-61; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 4816216 - 4816071
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  4816216 ttctcttctttgtgttcttctcgccgttgtttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctc 4816118  T
Q  102 cacacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4816117 cacacatcaagttgttattggtgtgatttttgatcagattcacaaca 4816071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 14507161 - 14507037
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14507161 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 14507063  T
Q  103 acacatcaagttgttattggtgtgat 128  Q
    ||||||||||||||||||||||||||    
T  14507062 acacatcaagttgttattggtgtgat 14507037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 33309189 - 33309313
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33309189 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 33309287  T
Q  106 catcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||    
T  33309288 catcaagttgttattggtgtgatttt 33309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 33311458 - 33311582
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33311458 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccaca 33311556  T
Q  106 catcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||    
T  33311557 catcaagttgttattggtgtgatttt 33311582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 2628871 - 2628743
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||| ||||||||||||||||||||||||||||||||||    
T  2628871 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacactttgattttggttgcttgattatcccttgctcc 2628772  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  2628771 acacatcaagttgttattggtgtgatttt 2628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 19704552 - 19704422
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt--ctacttttggcttgtatttaattgttccatacgctttgatttt-ggttgcttgattatcccttgc 99  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  19704552 ttctcttctttgtgttcttctcgccgttgttttttctacttttggcttgtatttaattgttccatacactttgatttttggttgcttgattatcccttgc 19704453  T
Q  100 tccacacatcaagttgttattggtgtgattt 130  Q
    |||||||||||||||||||||||||||||||    
T  19704452 tccacacatcaagttgttattggtgtgattt 19704422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 12195496 - 12195354
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||| ||||||||||||||||||    
T  12195496 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgctccaca 12195397  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  12195396 catcaagttgttattggtgtgatttttcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 14458752 - 14458604
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || ||||    
T  14458752 ttctcttctttgtgttcttctcgtcgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatccattactcc 14458653  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaaga 151  Q
    |||||||||| | ||||||||||||||||| |||  |||| ||||||||    
T  14458652 acacatcaagctattattggtgtgatttttcatcgaattcgcaacaaga 14458604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 28241306 - 28241179
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||    
T  28241306 ttctcttctttgtgttcttttcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttgattgcttgattatctcttgctcc 28241208  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  28241207 acacatcaagttgttattggtgtgatttt 28241179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 20915342 - 20915197
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||| |    
T  20915342 ttctcttctttgtgttcttctcgtcgttgtttttctacttttggcttgtatttaattatttcatacactttg-ttttggttgcttgattaccccttgccc 20915244  T
Q  102 cacacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20915243 cacacatcaagttattattggtgtgatttttgatcagattcacaaca 20915197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 26068376 - 26068234
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  26068376 tcttcttt-tgttcttctcgcagttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgctccac 26068279  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||| |||  |||||||||||    
T  26068278 acatcaagttgttattggtgtgatttttcatcgaattcacaacaa 26068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 26066102 - 26065961
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  26066102 tcttcttt-tgttcttctcgcagttgttttctactttttggcttgtatttaattgttccatacgctttg-ttttggttgcttaattatcccttgctccac 26066005  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  26066004 acatcaagttgttattggtgtgatttttcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 29754690 - 29754549
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29754690 tcttcttt-tgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttg-ttttggttgcttgattatcccttgctccac 29754593  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||| |||  ||||||||||    
T  29754592 acatcaagttgttattggtgtgatttttcatcgaattcacaaca 29754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 5273197 - 5273072
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||   || ||||| |||||||||||||||||||||||||||||||||||||    
T  5273197 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaaaaattacatacactttgattttggttgcttgattatcccttgctccaca 5273099  T
Q  106 catcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||    
T  5273098 catcaagttgttattggtgtgattttt 5273072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 30967530 - 30967657
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| | ||||| |||||||| |||||||||| ||||||||    
T  30967530 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattattccatgcactttg-ttttggttacttgattatctcttgctcc 30967628  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  30967629 acacatcaagttgttattggtgtgatttt 30967657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 26932545 - 26932402
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||    
T  26932545 tcttctttgtgttcttctcgccgttgtttttctacctttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccac 26932447  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  26932446 acatcaagttgttattggtgtgatttttcatcaaattcacaacaa 26932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 1230234 - 1230105
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggctt-gtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||| |||| |||||||||||||||||||| |||| ||    
T  1230234 ttctcttcattgtgttcttctcgccgttgttttatacttttggctttgtatttaattgtttcatacacttt-attttggttgcttgattatctcttgatc 1230136  T
Q  102 cacacatcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||||||    
T  1230135 cacacatcaagttgttattggtgtgattttt 1230105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 11983000 - 11982871
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  11983000 tctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagttgtta 11982902  T
Q  119 ttggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||| |||  |||||||||||    
T  11982901 ttggtgtgatttttcatcgaattcacaacaa 11982871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 26065320 - 26065439
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||| ||| || ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26065320 tgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag 26065419  T
Q  113 ttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||    
T  26065420 ttgttattggtgtgattttt 26065439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 26085289 - 26085408
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag 112  Q
    ||||| ||| || ||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26085289 tgttcttcttgctgttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag 26085388  T
Q  113 ttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||    
T  26085389 ttgttattggtgtgattttt 26085408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 9020269 - 9020382
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||  |||||||| |||||||||||||||||| |||||    
T  9020269 tctcgctgttgttttctacttttggcttgtatttataattgttccatacactttg-ttttggttgtctgattatctcttgctccacacatcaagtttgtt 9020367  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  9020368 attggtgtgattttt 9020382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 15367380 - 15367501
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  15367380 ttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacatgctccacacatcaagtttgttattggtgtgat 15367478  T
Q  129 ttttgatcagattcacaacaaga 151  Q
    |||| |||  |||||||||||||    
T  15367479 ttttcatcgaattcacaacaaga 15367501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30034590 - 30034463
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgct 100  Q
    |||| |||||||||||||| ||||||| ||||||||||||||| |||||||||||    || ||||| |||||  ||||||||||||||||| |||||||    
T  30034590 tattatcttctttgtgttcttctcgccattgttttctacttttagcttgtatttataactttcatacactttg--tttggttgcttgattat-ccttgct 30034494  T
Q  101 ccacacatcaagttgttattggtgtgatttt 131  Q
    ||| |||||||||||||||||||||||||||    
T  30034493 ccatacatcaagttgttattggtgtgatttt 30034463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 15346691 - 15346816
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||| ||||  |||||||||||  ||||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  15346691 gttgttttctacttttggcttgtgtttataattgttccatatactttg-ttttggttgcttgattatcacttgttccacacatcaagtttgttattggtg 15346789  T
Q  125 tgatttttgatcagattcacaacaaga 151  Q
    |||||||| |||  ||| |||||||||    
T  15346790 tgatttttcatcgaatttacaacaaga 15346816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 8717268 - 8717194
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaacaa 8717194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 24338418 - 24338294
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||||||||||| |||| ||||  |||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||| ||||||||| |    
T  24338418 cgttgttttctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgactatctcttgctccacacatcaagtttgttattgat 24338320  T
Q  124 gtgatttttgatcagattcacaacaa 149  Q
    ||||||||| |||  |||||||||||    
T  24338319 gtgatttttcatcgaattcacaacaa 24338294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 30728789 - 30728685
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||||||||  |||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  30728789 tgttttctacttttgacttgtatttataattgttccatacactttg-ttttggttgtttgactatcccttgctccacacatcaagtttgttattggtgtg 30728691  T
Q  127 attttt 132  Q
    ||||||    
T  30728690 attttt 30728685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 3629835 - 3629711
Alignment:
Q  27 cgttgttttctactttt-ggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattgg 122  Q
    ||||||||||||||||| ||||||| ||||  |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  3629835 cgttgttttctactttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtttgttattgg 3629737  T
Q  123 tgtgatttttgatcagattcacaaca 148  Q
    |||| ||| | |||  ||||||||||    
T  3629736 tgtgttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 18322493 - 18322550
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18322493 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttt 18322550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 3394716 - 3394815
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||    
T  3394716 tgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgtg 3394815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 3631904 - 3631783
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||| | |||||| |||||||||||| ||||| ||||||||||||||    
T  3631904 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcctaattatcacttgctccacacgtcaagtttgttattggtgtg 3631806  T
Q  127 atttttgatcagattcacaacaa 149  Q
     ||||| |||  |||||||||||    
T  3631805 ttttttcatcgaattcacaacaa 3631783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 15530129 - 15530022
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||  |||||| |||  ||||||| |||| |||||||||||||| ||||||||||||    
T  15530129 gttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattccttactccacacatcaagtttgttattggtg 15530030  T
Q  125 tgattttt 132  Q
    ||| ||||    
T  15530029 tgagtttt 15530022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 3233697 - 3233605
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa 111  Q
    |||||| |||||||||||||||||| |||| ||||  |||||| ||| | |||||||||||||||| |||||||| ||| |||||||||||||    
T  3233697 tctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcacttactccacacatcaa 3233605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 25480227 - 25480347
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    ||||||||||||||| ||||| ||| |||||||| ||||| |||| |||||||||||| || |||||||| ||| ||||||||| |  ||||||||||||    
T  25480227 tgttttctacttttgacttgtgattataattgtttcatacacttt-attttggttgctcgactatcccttactctacacatcaaatatttattggtgtga 25480325  T
Q  128 tttttgatcagattcacaacaa 149  Q
    ||||| |||  |||||||||||    
T  25480326 tttttcatcgaattcacaacaa 25480347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 13057587 - 13057643
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 132  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  13057587 ttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgattttt 13057643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 17012387 - 17012503
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattt 130  Q
    ||||||||||||||||||| ||| |  |||| |||| ||||| ||||||||||||||||||   |||||||||||||||||| | |||||| ||||||||    
T  17012387 ttttctacttttggcttgtgttttaacgttc-atacactttg-ttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgattt 17012484  T
Q  131 ttgatcagattcacaacaa 149  Q
    || |||  |||||||||||    
T  17012485 ttcatcgaattcacaacaa 17012503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 1069683 - 1069588
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 123  Q
    |||||||||||||| |||||| ||||  |||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||| || |||||||||||    
T  1069683 tgttttctactttttgcttgtgtttataattgttccatacactttg-ttttgattgcttgactatcccttgctccatacatcgaatttgttattggt 1069588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 22491005 - 22491077
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaa 146  Q
    |||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||| |||  ||||||||    
T  22491005 ttttggttgcttgattatccttagctccacacattaagtttgttattggtgtgatttttcatcgaattcacaa 22491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 3027822 - 3027719
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||| ||||||||||    |||||||| ||||   |||||||||| ||||||  ||||||||||||||||| |  |||| ||||||    
T  3027822 cgttgttttctacttttgacttgtatttataacttccatacacttta--tttggttgctcgattattacttgctccacacatcaaatatttatcggtgtg 3027725  T
Q  127 attttt 132  Q
    ||||||    
T  3027724 attttt 3027719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 15541064 - 15541006
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 132  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  15541064 ttttggtttcttgactatcccttgctccacacatcaagtttgttattggtttgattttt 15541006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 32280391 - 32280463
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||| ||| ||||| |||||||| |||||||| ||||||||||| |||  ||||||||||    
T  32280391 ttggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgattttttatcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 22611023 - 22611122
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 125  Q
    |||||||||||||||| ||||| ||||  ||||||||   | ||||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||    
T  22611023 ttgttttctacttttg-cttgtgtttataattgttcc---cactttgatattggttgcttgattat--tttgctccacacatcaagtattttattggtgt 22611116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 14466717 - 14466775
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt 132  Q
    |||||||||||||| |||| |||||| |||||||| || || |||||||||||||||||    
T  14466717 ttttggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgattttt 14466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 28078124 - 28078063
Alignment:
Q  71 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 132  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  28078124 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 28078063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 10584355 - 10584395
Alignment:
Q  92 tcccttgctccacacatcaag-ttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  10584355 tcccttgctccacacatcaagtttgttattggtgtggtttt 10584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 22351756 - 22351721
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22351756 ttgctccacacatcaagtt-ttattggtgtgattttt 22351721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 22132376 - 22132228
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttc--tacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgct 100  Q
    ||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  22132376 ttctcttctttgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatcccttgct 22132277  T
Q  101 ccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22132276 ccacacatcaagttgttattggtgtgattattgatcagattcacaacaa 22132228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 2484858 - 2484731
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  2484858 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacacttt-attttggttgcttgattatcccttgctcc 2484760  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  2484759 acacatcaagttgttattggtgtgatttt 2484731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 18847500 - 18847645
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||||    
T  18847500 ttctgttctttgtgttcttctcgccgttgttttctactttttggcttgtatttaattattccatacactttg--tttggttgcttgattatcccttgctc 18847597  T
Q  102 cacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18847598 cacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 18847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 47868747 - 47868895
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgct 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  47868747 tattctcttctttgtgttcttctcaccgttgttttctacttttggcttgtattttattgttccatacactttgattttggttgcctgattatcccttgct 47868846  T
Q  101 ccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||||| |||  |||| ||||||    
T  47868847 ccacacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 47868895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 22134603 - 22134456
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttc--tacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgct 100  Q
    ||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  22134603 ttctcttctttgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccatacactttg-ttttggttgtttgattatcccttgct 22134505  T
Q  101 ccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22134504 ccacacatcaagttgttattggtgtgattattgatcagattcacaacaa 22134456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 51015593 - 51015721
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  51015593 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 51015691  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||| |||||    
T  51015692 acacatcaagttgttattggtgtgtttttt 51015721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 5635461 - 5635334
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  5635461 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgattgattatcccttgctcc 5635363  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  5635362 acacatcaagttgttattggtgtgatttt 5635334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 11437710 - 11437857
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||    
T  11437710 ttctcttccttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggctgcttgattatctcttgctcc 11437809  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaag 150  Q
    | |||||||||||||||||||||||||||| |||  ||||||||||||    
T  11437810 atacatcaagttgttattggtgtgatttttcatcgaattcacaacaag 11437857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 22044376 - 22044231
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  22044376 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctcc 22044278  T
Q  103 acacatcaagttgttattggtgtgattttt-gatcagattcacaaca 148  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  22044277 acacatcaagttgttattggtgttatttttcgatcaaattcacaaca 22044231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 11435302 - 11435431
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  11435302 ttctcttccttgtgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatctcttgctcc 11435401  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||    
T  11435402 acacatcaagttgttattggtgtgattttt 11435431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9176461 - 9176331
Alignment:
Q  1 tattctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgc 99  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  9176461 tattctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattattccatacactttg-ttttggttgcttgattatcccttgc 9176363  T
Q  100 tccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||||||||    
T  9176362 tccacacatcaagttgttattggtgtgatttt 9176331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 11008553 - 11008407
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  11008553 ttctcttctttgtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctc 11008455  T
Q  102 cacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||| |||| ||||  |||||||||||    
T  11008454 cacacatcaagttgttattggtgtgtttttcgatcgaattcacaacaa 11008407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 22046671 - 22046525
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  22046671 ttctcttctttttgttcttctcgtcgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 22046573  T
Q  103 acacatcaagttgttattggtgtgattttt-gatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||    
T  22046572 acacatcaagttgttattggtgtgatttttcgatcgaattcacaacaa 22046525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 16931774 - 16931630
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  16931774 ttctcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctttg-ttttggttgcttaattatcccttgctcc 16931677  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||| ||||||||||||||||||||||| |||  |||||||||||    
T  16931676 acacattaagttgttattggtgtgatttttcatcgaattcacaacaa 16931630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 37089357 - 37089228
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  37089357 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatccattgctcc 37089259  T
Q  103 acacatcaag-ttgttattggtgtgattttt 132  Q
    |||||||||| ||||||||||||||||||||    
T  37089258 acacatcaagtttgttattggtgtgattttt 37089228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 8631404 - 8631276
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  8631404 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttg-ttttagttgcttgattatcccttgctc 8631306  T
Q  102 cacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||||||    
T  8631305 cacacatcaagttgttattggtgtgatttt 8631276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 31849584 - 31849456
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  31849584 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctc 31849486  T
Q  102 cacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||||||    
T  31849485 cacacatcaagttgttattggtgtgatttt 31849456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 14633666 - 14633792
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||| ||||||||    
T  14633666 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacattttg-tttcggttgcttgattatctcttgctcc 14633764  T
Q  103 acacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||||||||    
T  14633765 acacatcaagttgttattggtgtgattt 14633792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 38409552 - 38409696
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||    
T  38409552 ttctcttctttttgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacaatttg-ttttagttgcttgattatcccttgctcc 38409650  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||| |||| |||   ||||||||||    
T  38409651 acacatcaagttgttattggtgtgtttttcgattgaattcacaaca 38409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 24348557 - 24348676
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  24348557 tttgtgttcttctcgccgttgttttctatttttggcttgtatttagttgttccatacactttg-ttttggttgcttgattatcccttgctccacacatca 24348655  T
Q  111 agttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||    
T  24348656 agttgttattggtgtgatttt 24348676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 11006231 - 11006093
Alignment:
Q  11 tttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc 109  Q
    ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  11006231 tttgtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttgctccacacatc 11006133  T
Q  110 aagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||| |||| ||||  |||||||||||    
T  11006132 aagttgttattggtgtgtttttcgatcgaattcacaacaa 11006093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 22782719 - 22782593
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||||| |||||||||||| ||||||||||||||||||    
T  22782719 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataactttcatacgctttgtttttggttgcttaattatcccttgctccaca 22782620  T
Q  106 catcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||    
T  22782619 catcaagttgttattggtgtgattttt 22782593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 9174131 - 9174003
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||    
T  9174131 ttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattatttcatacactttg-ttttggttgcttgattatcccttgctc 9174033  T
Q  102 cacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||| ||||||||||    
T  9174032 cacacatcaagttgttattagtgtgatttt 9174003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 26085962 - 26085836
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||    || ||||| |||||||||||||||||||| |||||||||||||    
T  26085962 ttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttgctcc 26085863  T
Q  103 acacatcaagttgttattggtgtgatt 129  Q
    |||||||||||||||||||||||||||    
T  26085862 acacatcaagttgttattggtgtgatt 26085836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 5198759 - 5198879
Alignment:
Q  11 tttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc 109  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  5198759 tttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatccattgctccacacatc 5198857  T
Q  110 aagttgttattggtgtgatttt 131  Q
    ||||| ||||||||||||||||    
T  5198858 aagttattattggtgtgatttt 5198879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 7941674 - 7941798
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  7941674 tcttctttgtgttcttctcgccattgttttctacttttgccttgtatttcattgttccatacactttg-ttttggttgcttaattatcccttgctccaca 7941772  T
Q  106 catcaagttgttattggtgtgatttt 131  Q
    |||||||||||| |||||||||||||    
T  7941773 catcaagttgttgttggtgtgatttt 7941798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 9148591 - 9148705
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||||    
T  9148591 tttgtgttcttctcaccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgttccacacatca 9148689  T
Q  111 agttgttattggtgtg 126  Q
    ||||||||||||||||    
T  9148690 agttgttattggtgtg 9148705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 22780354 - 22780211
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||    ||  |||||||||| |||||||||||| ||||||||||||||||||    
T  22780354 tcttctttgtgttcttctcgccgttgttttctacttttggcttatatttataactttgatacgctttgtttttggttgcttaattatcccttgctccaca 22780255  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||| |||  |||| ||||||    
T  22780254 catcaagttgttattggtgtgatttttcatcgaattcgcaacaa 22780211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 44599819 - 44599679
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  44599819 tcttcttt-tgttcttctcgccgttgttttctacttttgccttgtatttaattattccatacgctttg-ttttggttgcttaattat-ccttgctccaca 44599723  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||| |||  |||| ||||||    
T  44599722 catcaagttgttattggtgtgatttttcatcgaattcgcaacaa 44599679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 16934128 - 16933987
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||   |||||||||||| ||  |||||||||||    
T  16934128 ttctcttcttt-tgttcttctcgccgttgttttctacttttggcttgtatttaattattccatacgctt--gttttggttgcttaat--tcccttgctcc 16934034  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||| ||||||||||||||||||||||| |||  |||||||||||    
T  16934033 acacattaagttgttattggtgtgatttttcatcgaattcacaacaa 16933987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 47210755 - 47210655
Alignment:
Q  29 ttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  47210755 ttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgctttattatctcttgctccacacatcaagttgttattggtgtgat 47210657  T
Q  129 tt 130  Q
    ||    
T  47210656 tt 47210655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 18709145 - 18709003
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||    || ||||| ||||| |||||||||||||||||| ||||||||||||    
T  18709145 tcttctttgtgttcttctcgccgttgttttctactattggcttgtatttataactttcatacactttg-ttttggttgcttgattatgccttgctccaca 18709047  T
Q  106 catcaagttgttattggtgt-gatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||| | ||||| |||| ||||||||||    
T  18709046 catcaagttgttattggtgtggttttttcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 6765192 - 6765335
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||| |  |||||||| ||||| ||||||||||||||||||||||| ||||    
T  6765192 ttctcttcttggtgttcttctcgccgttgttttctacttt-ggcttgtattta-taattccatacactttg-ttttggttgcttgattatcccttactcc 6765288  T
Q  103 acacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||| |||||||||||||||||||| |||  ||||||||||    
T  6765289 acacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 6765335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 22802706 - 22802576
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||| |||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  22802706 tctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgtt 22802608  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||| |||  |||||||||||    
T  22802607 attggtgtgatttttcatcgaattcacaacaa 22802576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 53405481 - 53405627
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||    ||||||||  |||| ||||||||||||||||||||||||||||    
T  53405481 ttctcttctttgtgttcttttcgccgatgttttctacttttggcttgtatttataacttccatacattttg-ttttggttgcttgattatcccttgctcc 53405579  T
Q  103 acacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||| || ||||||||||||||||| |||  |||| ||||||    
T  53405580 acacatcaagtttattattggtgtgatttttcatcgaattcgcaacaa 53405627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 40637435 - 40637545
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgatttt-ggttgcttgattatcccttgctccacacatcaagttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  40637435 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattccttgctccacacatcaagttgtt 40637534  T
Q  118 attggtgtgat 128  Q
    |||||||||||    
T  40637535 attggtgtgat 40637545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 2891657 - 2891780
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||| |||||||||||    
T  2891657 cgttgttttctacttttggcttgtgtttataattgttccatacacttt-attttggttgcttgattattctttgctccacacatcaagtttgttattggt 2891755  T
Q  124 gtgatttttgatcagattcacaaca 148  Q
    ||||||||| |||  ||||||||||    
T  2891756 gtgatttttcatcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 14789395 - 14789272
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14789395 gttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtg 14789297  T
Q  125 tgatttttgatcagattcacaacaa 149  Q
    |||||||| |||  |||| ||||||    
T  14789296 tgatttttcatcgaattcgcaacaa 14789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 14787396 - 14787290
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14787396 gttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtg 14787298  T
Q  125 tgattttt 132  Q
    ||||||||    
T  14787297 tgattttt 14787290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 17662219 - 17662108
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| ||||||||||||||||||| ||| ||| |||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||    
T  17662219 tctcgctgttgttttctacttttggcatgtgattataattgttccatacactttggttt-gattgcttgattatcccttgctccacacatcaagttgtta 17662121  T
Q  119 ttggtgtgatttt 131  Q
    |||||||||||||    
T  17662120 ttggtgtgatttt 17662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 38928147 - 38928040
Alignment:
Q  27 cgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38928147 cgttgttttctacttttggcttgtgattataactgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggt 38928049  T
Q  124 gtgattttt 132  Q
    |||||||||    
T  38928048 gtgattttt 38928040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 33415455 - 33415334
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  33415455 tgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtg 33415356  T
Q  127 atttttgatcagattcacaaca 148  Q
    |||| | ||| ||||| |||||    
T  33415355 atttctcatcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 24889157 - 24889265
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||||||| | |||||| |||||||||||||||||||||||||    
T  24889157 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg-ttttggttgttagattattccttgctccacacatcaagttgtta 24889255  T
Q  119 ttggtgtgat 128  Q
    ||||||||||    
T  24889256 ttggtgtgat 24889265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 36921458 - 36921337
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  36921458 tgttttctacttttggcttgtgtttataattgtttcatacacttt-attttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 36921360  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||  |||| ||||||    
T  36921359 atttttcatcgaattcgcaacaa 36921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 36919549 - 36919445
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||||  |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  36919549 tgttttctacttttgacttgtgtttataattgttccatacacttt-attttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 36919451  T
Q  127 attttt 132  Q
    ||||||    
T  36919450 attttt 36919445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 49088921 - 49089045
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| |||||||| ||| |||||||||| |||||||||||    
T  49088921 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttactcaacacatcaagtttgttattggt 49089019  T
Q  124 gtgatttttgatcagattcacaacaa 149  Q
    ||||||||| |||  |||| ||||||    
T  49089020 gtgatttttcatcgaattcgcaacaa 49089045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 22800834 - 22800721
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||| |||||||||||||||||| ||||  |||||||||||  ||||| |||||||||||||| ||||||||||||| ||||||||| |||||    
T  22800834 tctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttg-ttttggttgcttgactatcccttgctccccacatcaagtttgtt 22800736  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  22800735 attggtgtgattttt 22800721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 47563127 - 47563248
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||| | ||||  |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  47563127 tgttttctacttttggcttatgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtg 47563225  T
Q  127 atttt-tgatcagattcacaaca 148  Q
     |||| | |||| ||||||||||    
T  47563226 gttttctcatcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 52942460 - 52942346
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||||||||| |||| |||||||| ||| ||||||||||| || |||||    
T  52942460 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttactccacacatcaaatttgtt 52942361  T
Q  118 attggtgtgattttt 132  Q
    ||| |||||||||||    
T  52942360 atttgtgtgattttt 52942346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 16453676 - 16453797
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||| ||| |||| ||||| ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  16453676 tgttttctacttttggcttgtgattataactgtttcatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 16453774  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||  |||||||||||    
T  16453775 atttttcatcgaattcacaacaa 16453797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 3824569 - 3824465
Alignment:
Q  32 ttttctactttt-ggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    |||||||||||| ||||||| ||||  | ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  3824569 ttttctactttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga 3824470  T
Q  128 ttttt 132  Q
    |||||    
T  3824469 ttttt 3824465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 37313044 - 37312924
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||| | ||| |||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||    
T  37313044 tgttttctacttttggcttatgattataattgtttcatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttattattggtgtg 37312946  T
Q  127 atttttgatcagattcacaaca 148  Q
    |||||| |||| |||| |||||    
T  37312945 atttttcatcaaattcgcaaca 37312924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 24446623 - 24446501
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||||||| ||||  ||| |||||||| |||| |||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  24446623 ttgttttctacttttggcttgtgtttataatttttccatacacttt-attttggttgcttgattatcccttacttcacacatcaagtttgttattggtgt 24446525  T
Q  126 gatttttgatcagattcacaacaa 149  Q
    | ||| | |||  |||||||||||    
T  24446524 gttttctcatcgaattcacaacaa 24446501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 3937212 - 3937125
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||| ||||||    
T  3937212 ttccatacactttg--tttggttgcttgattatcccttgctcctcacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 3937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 6133202 - 6133309
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||| ||||| ||||| ||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  6133202 cgttgttttctacttttgacttgtgtttataattgtttcatacactttg-tttcggttgcttgattattccttgctccacacatcaagtttgttattggt 6133300  T
Q  124 gtgattttt 132  Q
    || ||||||    
T  6133301 gtaattttt 6133309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 27499413 - 27499520
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||||||||  ||||| ||||||||||||| |||| | ||||||||||||||||| |||||||||||    
T  27499413 cgttgttttctacttttgacttgtgtttataattgttccataaactttg-ttttggttgcttggttattcattgctccacacatcaagtttgttattggt 27499511  T
Q  124 gtgattttt 132  Q
    |||||||||    
T  27499512 gtgattttt 27499520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 40091378 - 40091276
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||| ||||  ||| |||||||| |||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||     
T  40091378 ttttctacttttggcttgtgtttataattattccatacacttt-attttggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaa 40091280  T
Q  129 tttt 132  Q
    ||||    
T  40091279 tttt 40091276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 4215672 - 4215774
Alignment:
Q  31 gttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||| ||||| |||||||||||| ||||||| ||||||||||||||||||| ||||||     
T  4215672 gttttctacttttggcttgtgattataattgtttcatacactttgtttttg-ttgcttgattattccttgcttcacacatcaagttgttatttgtgtgag 4215770  T
Q  129 tttt 132  Q
    ||||    
T  4215771 tttt 4215774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 5101284 - 5101405
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||| | |||||||||| ||||  |||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  5101284 tgttttctccctttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgatccacacatcaagtttgttattggtgtg 5101382  T
Q  127 atttttgatcagattcacaacaa 149  Q
     ||| | |||  |||||||||||    
T  5101383 ttttctcatcgaattcacaacaa 5101405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 16455624 - 16455714
Alignment:
Q  58 tgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| |||  ||||||||||    
T  16455624 tgttccatacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 16455714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 13547524 - 13547621
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||| ||||  |||||||||||| |||||||||||||||  | |||||| |||| ||||||||||||| ||||||||||||||    
T  13547524 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtg 13547621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 12395813 - 12395712
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||| ||||||||||||| ||| ||||  ||| ||| |||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  12395813 cgttgtcttctacttttggcatgtgtttataatttttcgatactctttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggt 12395715  T
Q  124 gtg 126  Q
    |||    
T  12395714 gtg 12395712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 12400775 - 12400674
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||| ||||||||||||| ||| ||||  ||| ||| |||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  12400775 cgttgtcttctacttttggcatgtgtttataatttttcgatactctttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggt 12400677  T
Q  124 gtg 126  Q
    |||    
T  12400676 gtg 12400674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 24879351 - 24879423
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattat 92  Q
    |||||| ||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||||||||||    
T  24879351 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattat 24879423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 41997887 - 41997976
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||||||||||||| || ||||||||||| ||||| |||| ||| |||||||    
T  41997887 ttccatacactttg-ttttggttgcttgattatcactttctccacacatcaagtttattattggtgtgttttttcatcaaattaacaacaa 41997976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 48486687 - 48486787
Alignment:
Q  28 gttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtg 124  Q
    ||||||||||||||||||||||| ||  |||||||||||| | ||||| |||| |||||||||||||| |||| ||||| |||| || ||||||||||||    
T  48486687 gttgttttctacttttggcttgtgtttataattgttccattcactttg-ttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtg 48486785  T
Q  125 tg 126  Q
    ||    
T  48486786 tg 48486787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 18409281 - 18409209
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 132  Q
    |||||||| ||||| |||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||    
T  18409281 ttccatacactttg-ttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgattttt 18409209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 47275092 - 47275190
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  ||| ||| |||| |||  |||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  47275092 tgttttctacttttggcttgtgtttataattattctatacacttc-attttgattgcttgattatcccttactccacacatcaagtttgttattgatgtg 47275190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 36378659 - 36378761
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||||| | |||| ||||  |||||| ||||| |||||  |||||||||||||||||  ||||||||||| ||||||| | |||||||||||    
T  36378659 tgttttctacttttcgtttgtgtttataattgtttcatacactttg--tttggttgcttgattattacttgctccacatatcaagtattttattggtgtg 36378756  T
Q  127 atttt 131  Q
    |||||    
T  36378757 atttt 36378761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 18534770 - 18534703
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga 127  Q
    |||||||| ||||| ||||||||||||||||||  ||||||||||||||||||| | ||||||||||||    
T  18534770 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttattggtgtga 18534703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 19323090 - 19323161
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    |||||||| |||| ||||| |||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  19323090 ttccatacacttt-attttagttgcttgattattacttgctccacacatcaagtattttattggtgtgatttt 19323161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 38270068 - 38270016
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  38270068 ttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtg 38270016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 24880813 - 24880887
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatt--taattgttccatacgctttg-attttggttgcttgattat 92  Q
    |||||| ||||||||||||||||||||||| ||  |||||||||| ||| |||||  ||||||||||||||||||    
T  24880813 tctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgattat 24880887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 56030828 - 56030929
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    |||||||||||||||  |||||||||    |||||||| ||||| |||||||||| ||| |||| ||||||||||| |||||| || |||||||||||||    
T  56030828 tgttttctacttttgt-ttgtatttataacttccatacactttg-ttttggttgcgtgactatctcttgctccacatatcaagtttattattggtgtgat 56030925  T
Q  129 tttt 132  Q
    ||||    
T  56030926 tttt 56030929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 5664605 - 5664706
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgat 128  Q
    |||||||||||||||| ||||  |||    |||||||| ||||| ||||||||||||||||||  | | ||||||||||||||| | |||||||||||||    
T  5664605 tgttttctacttttggtttgtcattataacttccatacactttg-ttttggttgcttgattattaccttctccacacatcaagtattttattggtgtgat 5664703  T
Q  129 ttt 131  Q
    |||    
T  5664704 ttt 5664706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 36380716 - 36380818
Alignment:
Q  30 tgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    ||||||||||||||||||||| ||  |||||||| ||||| |||||  |||| ||||||||| ||  ||| ||||||||||||| | | |||||||||||    
T  36380716 tgttttctacttttggcttgtgtttataattgtttcatacactttg--tttgattgcttgatcattacttactccacacatcaaatattttattggtgtg 36380813  T
Q  127 atttt 131  Q
    |||||    
T  36380814 atttt 36380818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 8756176 - 8756119
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    ||||||||||||||||||  ||||||||||||||||||| | |||||| |||||||||    
T  8756176 ttttggttgcttgattattacttgctccacacatcaagtattttattgatgtgatttt 8756119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 15032480 - 15032410
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    |||||||| |||||  |||||||||||||||||  |||||||| |||||||||| | ||||||||||||||||    
T  15032480 ttccatacactttg--tttggttgcttgattattacttgctccgcacatcaagtattttattggtgtgatttt 15032410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 12102479 - 12102550
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttg-ttattggtgtgatttt 131  Q
    |||||||| ||||| ||||||||||| | ||||  ||||||||||||||||||| | ||||||||||||||||    
T  12102479 ttccatacactttg-ttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtgatttt 12102550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 38890191 - 38890090
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgat 128  Q
    ||||||||| ||||| ||||| ||||    |||||||| |||||  |||||||||| |||||| |||||||||||| ||||| | | |||||||||||||    
T  38890191 tgttttctaattttgccttgtgtttataacttccatacactttg--tttggttgctagattattccttgctccacatatcaaatattttattggtgtgat 38890094  T
Q  129 tttt 132  Q
    ||||    
T  38890093 tttt 38890090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 52043483 - 52043411
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||| |  ||||||||||||||||| | ||||||||||||||||| | || |||||||||||    
T  52043483 ttttggttgcttgattattc--tgctccacacatcaagtattttattggtgtgattttt-aacaaattcacaacaa 52043411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 18537412 - 18537360
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt 113  Q
    |||||||| ||||| ||||| ||||||||||||  |||||||||||||||||||    
T  18537412 ttccatacactttg-ttttgattgcttgattattacttgctccacacatcaagt 18537360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 4885149 - 4885185
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  4885149 ttgctccacgcatcaagtttttattggtgtgattttt 4885185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 19096298 - 19096354
Alignment:
Q  77 ttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgattttt 132  Q
    |||||||||||| |||||||| ||||||||||| || || ||||| |||||||||||    
T  19096298 ttggttgcttgactatcccttactccacacatcaaatttattattagtgtgattttt 19096354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 23452222 - 23452094
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23452222 ttctcttctttgtgttcttctcgccgttgttttctacttttagcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctcc 23452123  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  23452122 acacatcaagttgttattggtgtgatttt 23452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 35217950 - 35217809
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||    
T  35217950 tcttcttt-tgttcttctcgccgttgttttctacttttgacttgtatttaattattccatacgctttg-ttttggttgcttaattatctcttgctccaca 35217853  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35217852 catcaagttgttattggtgtgatttttgatcagattcacaacaa 35217809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 13910030 - 13909902
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  13910030 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcccttactcc 13909932  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||| ||||    
T  13909931 acacatcaagttgttattggtgtgactttt 13909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 27105067 - 27105196
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  27105067 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgcatttaattgttccatacactttg-ttttggttgcttgattatcccttgctcc 27105165  T
Q  103 acacatcaag-ttgttattggtgtgattttt 132  Q
    |||||||||| ||||||||||||||||||||    
T  27105166 acacatcaagtttgttattggtgtgattttt 27105196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 35215573 - 35215433
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| || |||| |||||| |||||||||||| ||||||||||||||||||    
T  35215573 tcttcttt-tgttcttctcgccgttgttttctacttttgacttgtatttaattatttcatatgctttg-ttttggttgcttaattatcccttgctccaca 35215476  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35215475 catcaagttgttattggtgtgatttttgatcagattcacaaca 35215433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 45279978 - 45279860
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  45279978 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctccacacatca 45279880  T
Q  111 agttgttattggtgtgattt 130  Q
    ||||||||||||||||||||    
T  45279879 agttgttattggtgtgattt 45279860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 45332162 - 45332019
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||||| ||||||||||| |||||    
T  45332162 tcttctttgtgttcttctcgccgttgttttctactttttggcttgtatttaattgttacaaacgctttg-ttttggttgcttaattatcccttgttccac 45332064  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||| |||  |||||||||||    
T  45332063 acatcaagttgttattggtgtgatttttcatcgaattcacaacaa 45332019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 36558859 - 36558721
Alignment:
Q  10 ctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacat 108  Q
    |||||||||| |||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36558859 ctttgtgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttg-ttttggttgcttgattatcccttgctccacacat 36558761  T
Q  109 caagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||| ||||||||||||||||| |||  ||||||||||    
T  36558760 caagttattattggtgtgatttttcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 36561122 - 36560980
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctactttt-ggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||||| ||||| |||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  36561122 tcttcttt-tgttcttctcgcagttgttttctactttttggctcgtatttaattgttccatacgctttg-ttttggttgcttgattattccttgctccac 36561025  T
Q  105 acatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||| |||  |||||||||||    
T  36561024 acatcaagttgttattggtgtgatttttcatcgaattcacaacaa 36560980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 24162208 - 24162063
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||| ||| ||||    
T  24162208 ttctcttctttgtgtttttctcgccgttgttttctacttttggcttgtatttaattgtttcatacacttt-tttttggttgcttgattatctctttctcc 24162110  T
Q  103 acacatcaagttgttattggtgtgat-ttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||| |||| |||  ||||||||||    
T  24162109 acacatcaagttgttattggtgtgatattttcatcgtattcacaaca 24162063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 42064776 - 42064884
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||||||||    
T  42064776 tttgtgttcttcttgccgttgttttctactttttgcttgtatttaattgttccatacactttg-ttttagttgcttgatcatcccttgctccacacatca 42064874  T
Q  111 agttgttatt 120  Q
    ||||||||||    
T  42064875 agttgttatt 42064884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 19501958 - 19501859
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19501958 ttttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 19501859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 19504291 - 19504194
Alignment:
Q  34 ttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19504291 ttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 19504194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 17849403 - 17849511
Alignment:
Q  26 ccgttgttttctacttttggcttgtatttaa--ttgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattgg 122  Q
    ||||||||||||||||||||||||| |||||  ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  17849403 ccgttgttttctacttttggcttgtgtttaaaattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattgg 17849501  T
Q  123 tgtgattttt 132  Q
    ||||||||||    
T  17849502 tgtgattttt 17849511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 19007927 - 19008034
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  19007927 cgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggt 19008025  T
Q  124 gtgattttt 132  Q
    |||||||||    
T  19008026 gtgattttt 19008034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 21520664 - 21520556
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  21520664 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgctccacacatcaagtttgtt 21520565  T
Q  118 attggtgtg 126  Q
    |||||||||    
T  21520564 attggtgtg 21520556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 43623553 - 43623439
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt-gtt 117  Q
    |||||| ||||||||||||||||||||| | ||| |||||||||||||| |||| ||||||||||| ||||||||  ||||||||||||||||||| |||    
T  43623553 tctcgctgttgttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgctccacacatcaagttagtt 43623454  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  43623453 attggtgtgattttt 43623439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 42923475 - 42923373
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  42923475 cgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgctccacacatcaagtttgttattggt 42923376  T
Q  124 gtg 126  Q
    |||    
T  42923375 gtg 42923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 3022459 - 3022562
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||| |||||||||||| ||||  |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||    
T  3022459 cgttgttttctgcttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttgttatttgt 3022557  T
Q  124 gtgat 128  Q
    |||||    
T  3022558 gtgat 3022562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 28459157 - 28459054
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 126  Q
    |||||||||||||||| |||| ||||  |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  28459157 tgttttctacttttggtttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtgttttattggtgtg 28459059  T
Q  127 atttt 131  Q
    |||||    
T  28459058 atttt 28459054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 42453798 - 42453874
Alignment:
Q  54 taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42453798 taattgttccatacatttt-attttggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttt 42453874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 7462919 - 7462825
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  7462919 tctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtt 7462825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 28196925 - 28197046
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  |||||| ||||| ||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||||    
T  28196925 tgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgctggactatcccttgctccacacatcaaatttgttattggtgtg 28197023  T
Q  127 atttttgatcagattcacaacaa 149  Q
    |||||| |||  | |||||||||    
T  28197024 atttttcatcgaactcacaacaa 28197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 38020370 - 38020488
Alignment:
Q  30 tgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    |||||||||||||| |||||| ||| |||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||| || ||||||||||||||    
T  38020370 tgttttctacttttagcttgtgattataattgttccatacactttg-ttttggttgcttgattattccttgctccatacatcaaatttgttattggtgtg 38020468  T
Q  127 atttttgatcagattcacaa 146  Q
    |||||  |||| ||||||||    
T  38020469 attttacatcaaattcacaa 38020488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 14837558 - 14837679
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgt 125  Q
    |||||| |||||||||||||| ||||  ||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||  ||||||||| |||    
T  14837558 tgttttatacttttggcttgtgtttataattgttctatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtattgttattgatgt 14837656  T
Q  126 gatttttgatcagattcacaaca 148  Q
    ||||| | |||  ||||||||||    
T  14837657 gatttctcatcgaattcacaaca 14837679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 22287301 - 22287180
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||||| |||| ||||| ||||  |||||||||||| || || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22287301 tgttttctacgtttgacttgtttttataattgttccatacactatg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtg 22287203  T
Q  127 atttttgatcagattcacaacaa 149  Q
     ||| | |||  |||||||||||    
T  22287202 ttttctcatcgaattcacaacaa 22287180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 22162992 - 22162891
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggt 123  Q
    ||||||||||||||||||||||||  |||  | ||||||||||  |||| |||||||||||||||||||||||||| |||||||| || |||||||||||    
T  22162992 cgttgttttctacttttggcttgtgcttataactgttccatacaatttg-ttttggttgcttgattatcccttgcttcacacatcaaaattgttattggt 22162894  T
Q  124 gtg 126  Q
    |||    
T  22162893 gtg 22162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 6264116 - 6263992
Alignment:
Q  27 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||| ||||||| ||  |||||||||||||| ||||| |||||||||| ||||  || |||||||||||||||||| |||||||| ||    
T  6264116 cgttgttttctactttcggcttgtgttaataattgttccatacactttg-ttttggttgcctgatagtcacttgctccacacatcaagtttgttattagt 6264018  T
Q  124 gtgatttttgatcagattcacaacaa 149  Q
    ||| ||| | |||  |||||||||||    
T  6264017 gtgttttctcatcgaattcacaacaa 6263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 5375308 - 5375225
Alignment:
Q  32 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    |||| |||||||| ||||||||||  |||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  5375308 ttttttacttttgacttgtatttataattgttccatacactttg-ttttgattgcttgattatcccttactccacacatcaagtt 5375225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 6258782 - 6258687
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||| |||||| ||||  ||||||||| || ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  6258782 tgttttctacttttagcttgtgtttataattgttccagacactttg-ttttggttgcctgattatcacttgctccacacatcaagtttgttattggt 6258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 11578077 - 11577974
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 126  Q
    |||||||||||||||||||||||| |||||   |||||||  |||| |||||||||||||||||||  |||| ||||||||||||||| |||||  ||||    
T  11578077 cgttgttttctacttttggcttgtgtttaaac-ttccatatacttt-attttggttgcttgattattacttgttccacacatcaagtttttattaatgtg 11577980  T
Q  127 attttt 132  Q
    ||||||    
T  11577979 attttt 11577974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 15539497 - 15539396
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    ||||||||||||||||| |||||| ||||  ||||||| |||| ||||| ||||| ||||||||| |||| ||||||||||||||||| |||||||||||    
T  15539497 cgttgttttctactttttgcttgtgtttataattgttcaatacactttg-ttttgattgcttgataatcc-ttgctccacacatcaagtttgttattggt 15539400  T
Q  124 gtga 127  Q
    ||||    
T  15539399 gtga 15539396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 34979554 - 34979456
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||| | ||||  |||||||||||| |||| ||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||    
T  34979554 tgttttctacttttgacttatgtttataattgttccatacacttt-attttggttgctttattattccttactccacacatcaagtttgttattggtgtg 34979456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 11739532 - 11739420
Alignment:
Q  39 cttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtgatttttgat 135  Q
    |||||| ||||||||||  |||||| ||||| ||||| ||||  || ||||| |||||||||||| |||||||||||| |||||||||||||||||| ||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttattt-cttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcat 11739434  T
Q  136 cagattcacaacaa 149  Q
    |  |||||||||||    
T  11739433 cgaattcacaacaa 11739420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 17848754 - 17848816
Alignment:
Q  54 taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgt 116  Q
    |||||||| ||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  17848754 taattgtttcatacactgcgattttggttgcttgattatcacttgctccacacatcaagttgt 17848816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 22707716 - 22707613
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    |||||||||||| || ||||| ||||  |||||||||||| ||||| |||||||||||||||| | |||| ||||||||||| || ||||||||||||||    
T  22707716 tgttttctacttctgccttgtgtttataattgttccatacactttg-ttttggttgcttgattgttccttactccacacatcaaatttgttattggtgtg 22707618  T
Q  127 atttt 131  Q
     ||||    
T  22707617 gtttt 22707613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 22874431 - 22874519
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||| ||||| |||| ||||||||| |||| |||||||||||||||||| || ||||||||||||||||| |||  ||||||||||    
T  22874431 ttccatacactttg-ttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 22407419 - 22407346
Alignment:
Q  30 tgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||||||| ||  |||||||||||||| ||||| |||||||||||||| |||| ||||||||    
T  22407419 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatctcttgctcc 22407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 45238918 - 45238841
Alignment:
Q  73 gattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||| |||| |||| ||||||||||||| || ||||||||||||||||| |||  |||| ||||||    
T  45238918 gattttggttgcttgactatcgcttggtccacacatcaagtttattattggtgtgatttttcatcgaattcgcaacaa 45238841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 20592395 - 20592467
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 132  Q
    |||||||| ||||| ||||||||||||||||||  ||||||| |||||||| || | |||||||||||||||||    
T  20592395 ttccatacactttg-ttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgattttt 20592467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 42453041 - 42453086
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaa 56  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||    
T  42453041 tttgtgttcttctcgcctttgttttctatttttggcttgtatttaa 42453086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 38414150 - 38414027
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtg 124  Q
    |||||||||||||||||  ||||| ||||  ||| |||||||| ||||| |||| ||||| | |||||| | ||||||||||| ||| ||  | ||||||    
T  38414150 cgttgttttctacttttaccttgtgtttataattattccatacactttg-ttttcgttgcctaattatcacgtgctccacacaccaattttgttttggtg 38414052  T
Q  125 tgatttttgatcagattcacaacaa 149  Q
    |||||||| ||   |||||||||||    
T  38414051 tgatttttcatggaattcacaacaa 38414027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 37962865 - 37962789
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaacaag 150  Q
    ||||| || ||| |||||| ||| |||||||||||||| || |||||| |||||||||| |||  ||||||||||||    
T  37962865 ttttgattacttaattatcacttactccacacatcaagtttattattgatgtgatttttcatcgaattcacaacaag 37962789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 22684638 - 22684509
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  22684638 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccataaactttgattttggttgcctgattatcccttgctcc 22684539  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||    
T  22684538 acacatcaagttgttattggtgtgattttt 22684509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 44721193 - 44721337
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||    
T  44721193 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattattccatacactttg-ttttggttgcttgattatcccttactcc 44721291  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  44721292 acacatcaagttgttattggtgtgattattgatcagattcacaaca 44721337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 4424368 - 4424496
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  4424368 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatcccttgctcc 4424467  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    ||||| |||||||||||||||||||||||    
T  4424468 acacaccaagttgttattggtgtgatttt 4424496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 18811057 - 18811203
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  18811057 ttctcttctttgtgttcttctcgctgtcgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctcc 18811156  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||| |||  |||| ||||||    
T  18811157 acacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 18811203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 32339659 - 32339787
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  32339659 ttctcttctttgtgttcttctcgccgttattttctacttttgacttgtatttaattgttccatacactttgattttggttgcttgattatcccttgcccc 32339758  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  32339759 acacatcaagttgttattggtgtgatttt 32339787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 3883580 - 3883452
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  3883580 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatcctttgctcc 3883482  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||| ||||||||||    
T  3883481 acacatcaagttgttattgatgtgattttt 3883452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 18813231 - 18813360
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||     
T  18813231 ttctcttctttgtgttcttctcgccgtcgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctct 18813330  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||| ||||||||||||||||||||||||||    
T  18813331 acatatcaagttgttattggtgtgattttt 18813360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 28283206 - 28283061
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||||||||||||||||||||||||||    
T  28283206 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttatttttttcatacactttg-ttttggttgcttgattatcccttgctcc 28283108  T
Q  103 acacatcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||||||||||| |||  |||| ||||||    
T  28283107 acacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 28283061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 43530465 - 43530593
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  43530465 ttctcttctttgtgttcttcttgccattgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctcttgctcc 43530563  T
Q  103 acacatcaagttgttattggtgtgattttt 132  Q
    ||||||||||||||||||||||||||||||    
T  43530564 acacatcaagttgttattggtgtgattttt 43530593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 15809568 - 15809695
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  15809568 ttctcttctttgtgttcttctcgccgttgttttctatttttgccttgtatttaattgtttcatacactttg-ttttggttgcttgattatcccttgctcc 15809666  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  15809667 acacatcaagttgttattggtgtgatttt 15809695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 3874351 - 3874488
Alignment:
Q  11 tttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatca 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||    
T  3874351 tttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttggttatctcttgctccacacatca 3874449  T
Q  111 agttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    |||||||||||||||||||||| | |  |||||||||||    
T  3874450 agttgttattggtgtgatttttcaacgaattcacaacaa 3874488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 27827335 - 27827463
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  27827335 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttgtatttaattgttccatacactttg-ttttggttgcttgactatcccttgctcc 27827433  T
Q  103 acacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||||| |||||||||||||||||||    
T  27827434 acacatcaagtttgttattggtgtgatttt 27827463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 27829646 - 27829774
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  27829646 ttctcttctttgtgttcttctcgccgttgttttctacttttgacttatatttaattgttccatacactttg-ttttggttgcttgactatcccttgctcc 27829744  T
Q  103 acacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||||| |||||||||||||||||||    
T  27829745 acacatcaagtttgttattggtgtgatttt 27829774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 43082327 - 43082467
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||    || ||||| ||||| |||||||||||| ||||||||||||||||||    
T  43082327 tcttcttt-tgttcttctcgacgttgttttctacttttggcttgtatttataactttcatacactttg-ttttggttgcttaattatcccttgctccaca 43082424  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43082425 catcaagttgttattggtgtgatttttgatcagattcacaaca 43082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 609085 - 609214
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttg-attttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||||||||||| |||||||    
T  609085 ttctcttctttgtgttcttcttgccgttgttttctacttttggcttgtatttaattgtttcatacactttgttttttggttgcttgattatctcttgctc 609184  T
Q  102 cacacatcaagttgttattggtgtgatttt 131  Q
    ||| ||||||||||||||||||| ||||||    
T  609185 cacgcatcaagttgttattggtgcgatttt 609214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 43079956 - 43080097
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||||||    || ||||| ||||| |||||||||||| ||||||| ||||||||||    
T  43079956 tcttcttt-tgttcttctcgccgttgttttctacttttgacttgtatttataactttcatacactttg-ttttggttgcttaattatccattgctccaca 43080053  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43080054 catcaagttgttattggtgtgatttttgatcagattcacaacaa 43080097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 24873175 - 24873039
Alignment:
Q  13 tgtgttcatctcgccgttgttttctac-ttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaa 111  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    || ||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  24873175 tgtgttcttctcgccgttgttttctaccttttggcttgtatttataactttcatacactttgtttttggttgcttaattatcccttgctccacacatcaa 24873076  T
Q  112 gttgttattggtgtgatttttgatcagattcacaaca 148  Q
    ||||||||||||||||||||| |||  ||||||||||    
T  24873075 gttgttattggtgtgatttttcatcgaattcacaaca 24873039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 28251539 - 28251427
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtta 118  Q
    |||||| |||||||||||||| |||||||| ||| |||||||||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  28251539 tctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttg-ttttggttgcctgattattccttgctccacacatcaagttgtta 28251441  T
Q  119 ttggtgtgattttt 132  Q
    ||||||||||||||    
T  28251440 ttggtgtgattttt 28251427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 15073073 - 15073186
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  |||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| |||||    
T  15073073 tctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttgattgcttgactatcccttgctccacacatcaagtttgtt 15073171  T
Q  118 attggtgtgattttt 132  Q
    |||||||||||||||    
T  15073172 attggtgtgattttt 15073186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 33541372 - 33541255
Alignment:
Q  33 tttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 129  Q
    |||||||||||||||||| ||||  |||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  33541372 tttctacttttggcttgtgtttataattgttccatacacttt-attttgattgcttgattatcccttactccacacatcaagtttgttattggtgtgatt 33541274  T
Q  130 tttgatcagattcacaaca 148  Q
    |||||||  ||||||||||    
T  33541273 tttgatcgaattcacaaca 33541255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 14808128 - 14808235
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  14808128 cgttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatccgttgctccacacatcaagtttgttattggt 14808226  T
Q  124 gtgattttt 132  Q
    |||||||||    
T  14808227 gtgattttt 14808235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 15068343 - 15068473
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattt--aattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| |||  ||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||| |||||    
T  15068343 tctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttg-ttttggttgcttgactatcccttgttccacacatcaagtttgtt 15068441  T
Q  118 attggtgtgatttttgatcagattcacaacaa 149  Q
     |||||||||||||| |||  |||| ||||||    
T  15068442 gttggtgtgatttttcatcgaattcgcaacaa 15068473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 30480468 - 30480365
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 126  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||| |||| ||||||||||| || |||||||||||||     
T  30480468 tgttttctacttttggcttgtatttataattgttccatacactttg-ttttggttgcttgattattccttactccacacatcaaatttgttattggtgtc 30480370  T
Q  127 atttt 131  Q
    |||||    
T  30480369 atttt 30480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 35872422 - 35872300
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||||||| ||||  ||| |||||||| |||| |||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  35872422 ttgttttctacttttggcttgtgtttataatttttccatacacttt-attttggttgcttgattatcccttacttcacacatcaagtttgttattggtgt 35872324  T
Q  126 gatttttgatcagattcacaacaa 149  Q
    | ||| | |||  |||||||||||    
T  35872323 gttttctcatcgaattcacaacaa 35872300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 36865906 - 36866012
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||| | ||||  |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| |    
T  36865906 cgttgttttctacttttggcttttgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttgttattgat 36866004  T
Q  124 gtgatttt 131  Q
    ||| ||||    
T  36866005 gtggtttt 36866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 13858452 - 13858350
Alignment:
Q  30 tgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 128  Q
    ||||||||||||||||||||| ||||    |||||||| ||||| ||||||||||||||||||| |||||||||||||||||| || |||||||||||||    
T  13858452 tgttttctacttttggcttgtgtttataacttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgat 13858354  T
Q  129 tttt 132  Q
    ||||    
T  13858353 tttt 13858350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 41383025 - 41383138
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| |||||||||||||| |||||||| ||||  |||||||||||  ||||| ||||| ||||||||||||| |||||||||||||||||| |||||    
T  41383025 tctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttg-ttttgattgcttgattatctcttgctccacacatcaagtttgtt 41383123  T
Q  118 attggtgtgattttt 132  Q
    ||||||||| |||||    
T  41383124 attggtgtggttttt 41383138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 37214232 - 37214108
Alignment:
Q  27 cgttgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||||||||| ||  ||||||||| |||| ||||| ||||||||||||| ||||| ||| ||||| |||||||| |||||||||||    
T  37214232 cgttgttttctacttttggcttgtgtttataattgttctatacactttg-ttttggttgcttgcttatctcttactccatacatcaagtttgttattggt 37214134  T
Q  124 gtgatttttgatcagattcacaacaa 149  Q
    ||| ||| | |||| |||||||||||    
T  37214133 gtgttttctcatcaaattcacaacaa 37214108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 14477630 - 14477741
Alignment:
Q  40 ttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatc 136  Q
    ||||||||||| ||||  |||||| ||||| ||||| |||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||| |||    
T  14477630 ttttggcttgtgtttatgattgtttcatacactttg-ttttggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 14477728  T
Q  137 agattcacaacaa 149  Q
      |||||||||||    
T  14477729 gaattcacaacaa 14477741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 31162579 - 31162683
Alignment:
Q  27 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 125  Q
    |||||||||||||||||||||||||||||    |||||||| ||||| |||||||| ||| |||||  ||||||||||||||||||| | ||||||||||    
T  31162579 cgttgttttctacttttggcttgtatttataacttccatacactttg-ttttggttacttaattattacttgctccacacatcaagtattttattggtgt 31162677  T
Q  126 gatttt 131  Q
    ||||||    
T  31162678 gatttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 5372148 - 5372042
Alignment:
Q  29 ttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 125  Q
    |||||||||||||||||||||  ||||  | ||||||||||  ||| ||||| ||||||||| ||||| ||||||||||||||||| ||||||||| |||    
T  5372148 ttgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgt 5372049  T
Q  126 gattttt 132  Q
    |||||||    
T  5372048 gattttt 5372042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 14419155 - 14419034
Alignment:
Q  30 tgttttctacttttggcttgtatt--taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||| ||||| ||  |||||||||||||| ||||| |||||||| | |||||||| ||||||||| |||||||| ||||||||||||||    
T  14419155 tgttttctacttttgacttgtgtttataattgttccatacactttg-ttttggtttcctgattatcacttgctccatacatcaagtttgttattggtgtg 14419057  T
Q  127 atttttgatcagattcacaacaa 149  Q
     ||| | |||  |||||||||||    
T  14419056 ttttctcatcgaattcacaacaa 14419034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 25952891 - 25953012
Alignment:
Q  31 gttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 127  Q
    ||||||||||||||| |||| ||||  |||| | ||||| |||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||     
T  25952891 gttttctacttttggattgtgtttataattgcttcatacacttt-attttggttgcttgattatcactttctccacacatcaagtttgttattggtgtgt 25952989  T
Q  128 tttttgatcagattcacaacaag 150  Q
    ||| | |||  ||||||||||||    
T  25952990 tttctcatcgaattcacaacaag 25953012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 41385107 - 41385192
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccac 104  Q
    |||||| |||||||| |||||||||||||| ||||  |||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  41385107 tctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattatcccttgctccac 41385192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 27911446 - 27911570
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtt-attggt 123  Q
    |||||||||||||||||||||||| ||||  ||||||||| || ||||| |||| ||| ||  |||||| |||||||||||||||||||| || ||||||    
T  27911446 cgttgttttctacttttggcttgtgtttataattgttcca-acactttg-ttttagtttcta-attatcacttgctccacacatcaagttttttattggt 27911542  T
Q  124 gtgatttttgatcagattcacaacaaga 151  Q
    ||||||||| | || |||||||||||||    
T  27911543 gtgatttttcaacaaattcacaacaaga 27911570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 27957865 - 27957989
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgtt-attggt 123  Q
    |||||||||||||||||||||||| ||||  ||||||||| || ||||| |||| ||| ||  |||||| |||||||||||||||||||| || ||||||    
T  27957865 cgttgttttctacttttggcttgtgtttataattgttcca-acactttg-ttttagtttcta-attatcacttgctccacacatcaagttttttattggt 27957961  T
Q  124 gtgatttttgatcagattcacaacaaga 151  Q
    ||||||||| | || |||||||||||||    
T  27957962 gtgatttttcaacaaattcacaacaaga 27957989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 15956369 - 15956444
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||||| |||||||||| |||  |||||||||||    
T  15956369 ttttggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacaa 15956444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 27106835 - 27106769
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27106835 ttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtg 27106769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 21482724 - 21482798
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||||||||||| |||||| |||||||||||||||||| || ||||||||||||||||| |||  ||||||||||    
T  21482724 ttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 15185652 - 15185580
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 132  Q
    |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||    
T  15185652 ttccatacactttg-ttttggttgcttgactatcccttactccacacatcaagtttgttattgatgtgattttt 15185580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 2468052 - 2467995
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||    
T  2468052 ttttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttt 2467995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 1225571 - 1225626
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 129  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  1225571 ttttggttgcttgattattccttgttccacacatcaagtatgttattggcgtgatt 1225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 3005572 - 3005502
Alignment:
Q  60 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 131  Q
    |||||||| |||||  |||||||| ||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  3005572 ttccatacactttg--tttggttgtttgattattacttgctccacacatcaagtattttattggtgtgatttt 3005502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 183246 - 183310
Alignment:
Q  85 ttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaaca 148  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||| | |||  ||||||||||    
T  183246 ttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 21480916 - 21480991
Alignment:
Q  75 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||| |||||| || ||| |||||||||||||| || |||||||||| |||||| |||  |||||||||||    
T  21480916 ttttggttgtttgattgtcacttactccacacatcaagtttattattggtgttatttttcatcgaattcacaacaa 21480991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 30423489 - 30423525
Alignment:
Q  96 ttgctccacacatcaagttgttattggtgtgatttttg 133  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  30423489 ttgctccacacatcaagtt-ttattggtgtgatttttg 30423525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 332 - 455
Alignment:
Q  8 ttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacac 106  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  332 ttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacac 431  T
Q  107 atcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||||    
T  432 atcaagttgttattggtgtgattt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 6506 - 6647
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  6506 tcttcttt-tgttcttctcgccgttgttttctacttttggcttgtattta-ttattccatacgctttgattttggttgcttaattatcccttgctccaca 6603  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||||||||||||| |||  |||||||||||    
T  6604 catcaagttgttattggtgtgatttttcatcgaattcacaacaa 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 4650 - 4517
Alignment:
Q  15 tgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagtt 114  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||    
T  4650 tgttcttctcgccattgttttctacttttggcttgtatttaattgttccatacgctttgactttg-ttgcttgattatcccttactccacacatcaaatt 4552  T
Q  115 gttattggtgtgatttttgatcagattcacaacaa 149  Q
    ||||||||||||||||| |||||||||||||||||    
T  4551 gttattggtgtgattttggatcagattcacaacaa 4517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 146
Target Start/End: Complemental strand, 1433 - 1294
Alignment:
Q  6 tcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccaca 105  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  || |||||||    
T  1433 tcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttggttgcttgattatctttttctccaca 1335  T
Q  106 catcaagttgttattggtgtgatttttgatcagattcacaa 146  Q
    ||||||||||||||||||||||||||| |||  ||||||||    
T  1334 catcaagttgttattggtgtgatttttcatcgaattcacaa 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 41468 - 41341
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||    
T  41468 ttctcttctttgtgttcttttcgccgttgttttctacttttggcttgtatttaattgttccatacactttg-ttttgattgcttgattatctcttgctcc 41370  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  41369 acacatcaagttgttattggtgtgatttt 41341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 183626 - 183500
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||| ||||||||    
T  183626 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttaattgttccatacattttg-tttcggttgcttgattatctcttgctcc 183528  T
Q  103 acacatcaagttgttattggtgtgattt 130  Q
    ||||||||||||||||||||||||||||    
T  183527 acacatcaagttgttattggtgtgattt 183500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 50335 - 50458
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50335 gttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtg 50433  T
Q  125 tgatttttgatcagattcacaacaa 149  Q
    |||||||| |||  |||| ||||||    
T  50434 tgatttttcatcgaattcgcaacaa 50458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 52334 - 52440
Alignment:
Q  28 gttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||| ||||  |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52334 gttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtg 52432  T
Q  125 tgattttt 132  Q
    ||||||||    
T  52433 tgattttt 52440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 29473 - 29600
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  29473 ttctcttttttgtgttcttctctccgttgttttctacttttggcttttatttaattgttccatacactttg-ttttgattgcttgattatcccttgctcc 29571  T
Q  103 acacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||||||||||||||||    
T  29572 acacatcaagttgttattggtgtgatttt 29600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 1438 - 1309
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||    
T  1438 ttctcttctttgtgatcttctcgccgttgtttttctacttttggcttgtatttaattgttacatacactttg-ttttggttgcttgattatctcttgctc 1340  T
Q  102 cacacatcaagttgttattggtgtgattttt 132  Q
    |||||||||||||||||||||||||||||||    
T  1339 cacacatcaagttgttattggtgtgattttt 1309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 24723 - 24840
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24723 ttttctacttttggctcgtattttattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 24822  T
Q  132 tgatcagattcacaacaa 149  Q
    |  ||  |||||||||||    
T  24823 tcgtcgaattcacaacaa 24840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 22448 - 22565
Alignment:
Q  32 ttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 131  Q
    |||||||||||||||| |||||| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22448 ttttctacttttggctcgtattttattattccatgcgctttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttt 22547  T
Q  132 tgatcagattcacaacaa 149  Q
    |  ||  |||||||||||    
T  22548 tcgtcgaattcacaacaa 22565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 69277 - 69149
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctcc 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||  |||| |||||||||| |||||||||||||||||    
T  69277 ttctcttctttgtgttcttctcgccgttgttttctacttttggcttgtatttataacttccatacattttg-ttttggttgcctgattatcccttgctcc 69179  T
Q  103 acacatcaag-ttgttattggtgtgatttt 131  Q
    |||||||||| |||||||||||||||||||    
T  69178 acacatcaagtttgttattggtgtgatttt 69149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 3182 - 3309
Alignment:
Q  3 ttctcttctttgtgttcatctcgccgttgttttctacttttgg-cttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctc 101  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||    || ||||| |||||  ||||||||||||||||||||||||||    
T  3182 ttctcttctttgtgttcttctcgccgttgttttctactttttgacttgtatttataactttcatacactttg--tttggttgcttgattatcccttgctc 3279  T
Q  102 cacacatcaagttgttattggtgtgatttt 131  Q
    ||||||||||||||||||||||||||||||    
T  3280 cacacatcaagttgttattggtgtgatttt 3309  T

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Target: scaffold0131 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 30 - 131
Target Start/End: Complemental strand, 14349 - 14247
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 127  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14349 tgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtga 14251  T
Q  128 tttt 131  Q
    ||||    
T  14250 tttt 14247  T

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Target: scaffold0127 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 12841 - 12714
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttatt 120  Q
    ||||||||||||| |||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12841 tctcgccgttgttgtctacttttggcttgtatttataactttcatacactttg-ttttggttgcttgattatcccttgctccacacatcaagttgttatt 12743  T
Q  121 ggtgtgatttttgatcagattcacaacaa 149  Q
    ||||| |||||| |||  |||||||||||    
T  12742 ggtgtcatttttcatcgaattcacaacaa 12714  T

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Target: scaffold0031 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 79508 - 79615
Alignment:
Q  28 gttgttttctacttttggcttgt-att-taattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 124  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  79508 gttgttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtttgttattggtg 79607  T
Q  125 tgattttt 132  Q
    ||||||||    
T  79608 tgattttt 79615  T

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Target: scaffold0045 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 85549 - 85657
Alignment:
Q  27 cgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 123  Q
    |||||||||||||||||| ||||| ||||  |||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||||    
T  85549 cgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctccacacattaagattgttattggt 85648  T
Q  124 gtgattttt 132  Q
    |||||||||    
T  85649 gtgattttt 85657  T

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Target: scaffold0011 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 35909 - 36023
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||| | ||||||||||| ||||  |||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  35909 tctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctccacacatcaagtttgtt 36008  T
Q  118 attggtgtgattttt 132  Q
    |||||||| ||||||    
T  36009 attggtgtaattttt 36023  T

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Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 80175 - 80283
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||||  ||| |||||||| |||||||||| ||||| |||||||  |||||||||||||||||| |||||    
T  80175 tctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgctccacacatcaagtttgtt 80274  T
Q  118 attggtgtg 126  Q
    |||||||||    
T  80275 attggtgtg 80283  T

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Target: scaffold0154 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 11445 - 11335
Alignment:
Q  21 tctcgccgttgttttctacttttggcttgt-att-taattgttccatacgctttgattttg-gttgcttgattatcccttgctccacacatcaagttgtt 117  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||  ||||  ||||||| ||||| |||| |||||||||||||||||||    
T  11445 tctcgctgttgttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattccttactccacacatcaagttgtt 11346  T
Q  118 attggtgtgat 128  Q
    |||||||||||    
T  11345 attggtgtgat 11335  T

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Target: scaffold0468 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 1609 - 1509
Alignment:
Q  29 ttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgat 128  Q
    |||||||||||||||||||||| ||||    |||||||| |||||  |||||||||||||||||  ||||||||||||||||| |  |||||||||||||    
T  1609 ttgttttctacttttggcttgtgtttataacttccatacactttg--tttggttgcttgattattacttgctccacacatcaaatatttattggtgtgat 1512  T
Q  129 ttt 131  Q
    |||    
T  1511 ttt 1509  T

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Target: scaffold1899 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 1 - 46
Alignment:
Q  87 gattatcccttgctccacacatcaagttgttattggtgtgattttt 132  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  1 gattatctcttgctccacacatcaagttgttattggtgtgattttt 46  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 4317 - 4415
Alignment:
Q  30 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 126  Q
    ||||||||||||||||||||| ||||  ||| ||| |||| |||  |||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  4317 tgttttctacttttggcttgtgtttataattattctatacacttc-attttgattgcttgattatcccttactccacacatcaagtttgttattgatgtg 4415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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