View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3113_high_14 (Length: 212)
Name: NF3113_high_14
Description: NF3113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3113_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 19994130 - 19993974
Alignment:
| Q |
17 |
caatgaaggtggatttaattgttaaagaattaattcataccccgacaaaaatgtctgtttaccttttgttgttggtttgataacctcttaaacgttagca |
116 |
Q |
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| T |
19994130 |
caatgaaggttgatttaattgttacaaaattaattcataccccgacaaaaatgtgtgtttaccttttgttgttggtttgataacctcttaaacgtaagca |
19994031 |
T |
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| Q |
117 |
ttttgcgagtcttaaaatctgcttacaaaatccaattcatctcaactttttcttaat |
173 |
Q |
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| T |
19994030 |
ttttacgagttttaaaatctgcttacaaaatccaattcatctcaactttttcttaat |
19993974 |
T |
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