View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3113_low_15 (Length: 219)
Name: NF3113_low_15
Description: NF3113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3113_low_15 |
 | |
|
| [»] scaffold0371 (1 HSPs) |
| | |
|
| [»] scaffold1283 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
| [»] scaffold0034 (1 HSPs) |
| | |
|
| [»] scaffold0503 (1 HSPs) |
| | |
|
| [»] scaffold0064 (1 HSPs) |
| | |
|
| [»] scaffold0047 (1 HSPs) |
| | |
|
| [»] scaffold0031 (1 HSPs) |
| | |
|
| [»] scaffold0056 (1 HSPs) |
| | |
|
| [»] scaffold0071 (1 HSPs) |
| | |
|
| [»] scaffold0230 (2 HSPs) |
| | |
|
| [»] scaffold1351 (1 HSPs) |
| | |
|
| [»] scaffold0111 (2 HSPs) |
| | |
|
| [»] scaffold0098 (1 HSPs) |
| | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0235 (2 HSPs) |
| | |
|
| [»] scaffold0192 (1 HSPs) |
| | |
|
| [»] scaffold0075 (1 HSPs) |
| | |
|
| [»] scaffold0151 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0371 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0371
Description:
Target: scaffold0371; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 2767 - 2633
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2767 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
2668 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
2667 |
agttgttatttacccatgtgtcgttaatgaagtgc |
2633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40806880 - 40806746
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40806880 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
40806781 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
40806780 |
agttgttatttacccatgtgtcgttaatgaagtgc |
40806746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 5206771 - 5206905
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5206771 |
tgcatgattaagaggtcgtagttgcattttgtctagatggatcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
5206870 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
5206871 |
agttgttatttacccatgtgtcgttaatgaagtgc |
5206905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13031893 - 13032027
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13031893 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcattgttgtta |
13031992 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
13031993 |
agttgttatttacccatgtgtcgttaatgaagtgc |
13032027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30175682 - 30175815
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30175682 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagttgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
30175781 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
30175782 |
agttgttatttacccatgtgtcgttaatgaagtg |
30175815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17538014 - 17537879
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatcta-gatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17538014 |
tgcatgattaagaggtcatatttgcattttgtctaagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
17537915 |
T |
|
| Q |
100 |
aagttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17537914 |
aagttgttatttacacatgtgtcgttaatgaagtgc |
17537879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15932622 - 15932756
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
15932622 |
tgcatgattaagaggtcgtagttgcattttgtctagatggatcaatatgtgtaagatgtctaagttgcattgtcgagttgaagtcatgttgttgttgtta |
15932721 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
15932722 |
agttgttatttatccatgtgtcgttaatgaagtgc |
15932756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 17520138 - 17520272
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17520138 |
tgcatgattaagaggttgtagttgcactttgtctagttggtttaagatgtgtaagatgtctaaattgcattgtcgagttgaagtcgtgtcgttgttgtta |
17520237 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17520238 |
agttgttatttacccatatgtcgttaatgaagtgc |
17520272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 31225073 - 31225205
Alignment:
| Q |
3 |
catgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaag |
102 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31225073 |
catgattaagaggtcatagttgcattttgtctagatagttcaagatgtgtaagaagtttaagttgcattgttaagttgaagtcgtgtcgttgttgttaag |
31225172 |
T |
|
| Q |
103 |
ttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||| |
|
|
| T |
31225173 |
ttgttatttattcatgtgtcgttaacgaagtgc |
31225205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 11258309 - 11258175
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | ||||||| |||||| ||||| |||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
11258309 |
tgcatgattaagaggttgtagttgcatttttttgagatggtctaagatgaataagaagtctaagttgcattgttaagttgaagttgtgtcgttgttgtta |
11258210 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
11258209 |
agttgctatttacccatgtgtcgttaacgaagtgc |
11258175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15448114 - 15448248
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||| || ||||||| |||||| ||||| || ||||||||||||| ||||||||| ||||||||||||| | |
|
|
| T |
15448114 |
tgcatgattaagagatcgtagttgcattttgtcgagatggtctaagatgaataagaagtttaagttgcattgttaagttgaagttgtgtcgttgttgtca |
15448213 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||| |
|
|
| T |
15448214 |
cgttgttatttatccatgtgtcgttaacgaagtgc |
15448248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 31415076 - 31414968
Alignment:
| Q |
4 |
atgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaagt |
103 |
Q |
| |
|
||||||||||||| ||||||||||||| | ||||||| |||||| ||||| |||||||||||||||| ||||||||| ||||||| |||||||||| |
|
|
| T |
31415076 |
atgattaagaggttgtagttgcattttgacgagatggtctaagatgaataagaagtctaagttgcattgttaagttgaagttgtgtcgtcgttgttaagt |
31414977 |
T |
|
| Q |
104 |
tgttattta |
112 |
Q |
| |
|
||||||||| |
|
|
| T |
31414976 |
tgttattta |
31414968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22147888 - 22148000
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
||||||| |||||||| ||||||||||||| || ||||||| |||||| ||| | |||||||||||||||| ||||||||| |||||||||| || |
|
|
| T |
22147888 |
tgcatgactaagaggttgtagttgcatttttgtcaagatggtctaagatgaataaaaggtctaagttgcattgttaagttgaagttgtgtcgttgtgatt |
22147987 |
T |
|
| Q |
100 |
aagttgttattta |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22147988 |
aagttgttattta |
22148000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37642599 - 37642711
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || ||| ||| |||||| |||||||||||||||||||||| |||||| || |||||||| | || |
|
|
| T |
37642599 |
tgcatgattaagaggttgtagttgcatttttgtcaagagggtctaagatgaataagatgtctaagttgcattgttaagttgaggttgtgtcgttatgatt |
37642698 |
T |
|
| Q |
100 |
aagttgttattta |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
37642699 |
aagttgttattta |
37642711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40811695 - 40811656
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatgg |
40 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
40811695 |
tgcatgattaagaggtcgtagttgcattttgtctagatgg |
40811656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23413772 - 23413862
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtc |
90 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| ||||| |
|
|
| T |
23413772 |
tgcatgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagttgtgtc |
23413862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45796765 - 45796681
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagt |
84 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
45796765 |
tgcatgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagt |
45796681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 14497108 - 14497027
Alignment:
| Q |
4 |
atgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagt |
84 |
Q |
| |
|
||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
14497108 |
atgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagt |
14497027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 17669133 - 17669089
Alignment:
| Q |
42 |
tcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcg |
86 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||| |||| |
|
|
| T |
17669133 |
tcaagatgattaagatgtttaagttgcattgtcgagttgatgtcg |
17669089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 46387207 - 46387340
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46387207 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
46387306 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
46387307 |
agttgttatttacccatgtgtcgttaatgaagtg |
46387340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 61587 - 61719
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
61587 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtttaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
61686 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagt |
133 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||| |
|
|
| T |
61687 |
agttgttatttatccatgtgtcgttaataaagt |
61719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8852333 - 8852467
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
8852333 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgatttgaaattgtgtcgttgttgtta |
8852432 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |
|
|
| T |
8852433 |
agttgttatttacccatgtgtcgttaattaagtgc |
8852467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18075652 - 18075785
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18075652 |
tgcatgattaaaaggttgtagttgcattttgttgagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagttgtgtcgttgttgtta |
18075751 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
18075752 |
agttgttatttacccatgtgtcgttaatgaagtg |
18075785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 38479907 - 38479796
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||| |||||| ||||| ||||||||||||||| ||||||||| | ||||||||||||| |
|
|
| T |
38479907 |
tgcatgattaagaggtcgtagttgcattttgacgagatggtctaagatgaataagaagtctaagttgcattgataagttgaagttgcgtcgttgttgtta |
38479808 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
38479807 |
agttgttattta |
38479796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 17064443 - 17064496
Alignment:
| Q |
39 |
ggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgt |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17064443 |
ggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgt |
17064496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19487020 - 19487132
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
||||||| |||||||| ||||||||||||| || ||||||| |||||| ||||| |||||||||||||||| ||||||||| |||||||||| || |
|
|
| T |
19487020 |
tgcatgactaagaggttgtagttgcatttttgtcaagatggtctaagatgaataagaggtctaagttgcattgttaagttgaagttgtgtcgttgtgatt |
19487119 |
T |
|
| Q |
100 |
aagttgttattta |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
19487120 |
aagttgttattta |
19487132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1543545 - 1543635
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtc |
90 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| ||||| |
|
|
| T |
1543545 |
tgcatgattaagaggttgtagttgcatttttgtcaagagggtctaagatgaataagaggtctaagttgcattgttaagttgaagttgtgtc |
1543635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11424824 - 11424691
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11424824 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
11424725 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
11424724 |
agttgttatttacccatgtgtcgttaatgaagtg |
11424691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 53631719 - 53631852
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
53631719 |
tgcatgattaagatgtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
53631818 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
53631819 |
agttgttatttacccatgtgtcgttaatgaagtg |
53631852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21816002 - 21816133
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21816002 |
tgcatgattaagaggtcgtagtcgcattttgtctagatggttcaagatgtataagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
21816101 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaag |
132 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |
|
|
| T |
21816102 |
agttgttatttacccacgtgtcgttaatgaag |
21816133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6190259 - 6190161
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6190259 |
tgcatgattaagaggtcgtagtcgcattttgtctagatggttcaagaggtataagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
6190161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19609165 - 19609035
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||| |||||| ||||| |||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
19609165 |
tgcatgattaagaggtcgtagttgcattttgttgagatggtctaagatgaataagaagtctaagttgcattgttaagttgaagttgtgtcgttgttgtta |
19609066 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaa |
131 |
Q |
| |
|
|||||||||||| || || || ||||||||| |
|
|
| T |
19609065 |
agttgttatttaaccttgagttgttaatgaa |
19609035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33185878 - 33185767
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||| ||||| |||||||||||||||||| || ||||||| |||||| ||||| |||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
33185878 |
tgcattattaaaaggtcgtagttgcattttgtcgagatggtctaagatgaataagaagtctaagttgcattgttaagttgaagttgtgtcgttgttgtta |
33185779 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
33185778 |
agtttttattta |
33185767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 19561641 - 19561697
Alignment:
| Q |
37 |
atggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgtt |
93 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19561641 |
atggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgtt |
19561697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 22353590 - 22353478
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || ||||||| |||||| ||||| ||||||| |||||||| ||||||||| |||||||||| || |
|
|
| T |
22353590 |
tgcatgattaagaggttgtagttgcatttttgtcaagatggtctaagatgaataagaggtctaagatgcattgttaagttgaagttgtgtcgttgtgatt |
22353491 |
T |
|
| Q |
100 |
aagttgttattta |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22353490 |
aagttgttattta |
22353478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15869229 - 15869320
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgt |
92 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
15869229 |
tgcatgattaagaggttgtagttgcattttttcaagagggtctaagatgaataagaggtctaagttgcattgttaagttgaagttgtgtcgt |
15869320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 32850979 - 32850895
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagt |
84 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
32850979 |
tgcatgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagt |
32850895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24713105 - 24712971
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24713105 |
tgcatgattaagaggtcgtagttgcattttgtctagatggatcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
24713006 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
24713005 |
agttgttatttacccatgtgtcgttaatgaagtgc |
24712971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39937178 - 39937312
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
39937178 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttacattgtcgagttgaagtcgtgtcgttgttgtta |
39937277 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
39937278 |
agttgttatttacccatgtgtcgttaatgaagtgc |
39937312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 33587159 - 33587292
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33587159 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
33587258 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |
|
|
| T |
33587259 |
agttgttatttacccatgcgtcgttaatgaagtg |
33587292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 18760314 - 18760182
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18760314 |
tgcatgattaaggggtcgtagttgcattttgtcgagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
18760215 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagt |
133 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
18760214 |
agttgttatttacccatgtgtccttaatgaagt |
18760182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23944295 - 23944429
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgca-ttgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
23944295 |
tgcatgattaagaggttgtagttgcattttgtctagatggttcaagatgtgtaagatgtttaagttgcatttgtcgagttgaagtcgtgccgttgttgtt |
23944394 |
T |
|
| Q |
100 |
aagttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |
|
|
| T |
23944395 |
aatttgttatttacccatgtgtcgttaatgaagtg |
23944429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19801790 - 19801888
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19801790 |
tgcatgattaagaggtcgtagtcgcattttgtctagatggttcaagaggtataagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
19801888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24435937 - 24435803
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24435937 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
24435838 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24435837 |
agttgttatttgcccatgtgtcgttaatgaagtgc |
24435803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22252788 - 22252921
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22252788 |
tgcatgattaagaggtcgtagttgcatttg-tctggatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
22252886 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
22252887 |
agttgttatttacccatgtgtcgttaatgaagtgc |
22252921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23969811 - 23969945
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
23969811 |
tgcatgattaagaggtcgtagttgcatttttgtctagatggttcaagatgcgtaagatgtctaagttgcattgtcaagttgaagtcgtgtcgttgttgtt |
23969910 |
T |
|
| Q |
100 |
aagttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23969911 |
aagttgttattcacccatgtgtcgttaatgaagtg |
23969945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 6576121 - 6575989
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
6576121 |
tgcatgattaagaggtcgtagttgcattttgtctagatgattcaagatgtgtaagatgtctaagttgcattgttgagttgaagtcgtgtcgttgtcatta |
6576022 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagt |
133 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
6576021 |
agttgatatttacccatgtgtcgttaatgaagt |
6575989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19202372 - 19202507
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
19202372 |
tgcatgattaagaggtcgtagttgcatttttgtctatatggttcaagatgtgtaagatgtctaagttgcattgccgagttgaagtcgtgtcgttgttgtt |
19202471 |
T |
|
| Q |
100 |
aagttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| |
|
|
| T |
19202472 |
aagttgttattcatccatgtgtcgttaatgaagtgc |
19202507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24865928 - 24866039
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||||||| |||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
24865928 |
tgcatgattaagatgtcgtagttgcattttaacgagatggtctaagatgaataagaagtctaagttgcattgataagttgaagttgtgtcgttgttgtta |
24866027 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
24866028 |
agtttttattta |
24866039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7672615 - 7672726
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||| | ||||||| |||||| ||||| ||||||||||||||| ||||||||| || |||||||||||| |
|
|
| T |
7672615 |
tgcatgattaagatgtcgtagttgcattttgacgagatggtctaagatgaataagaagtctaagttgcattgataagttgaagttgtatcgttgttgtta |
7672714 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
7672715 |
agttgttattta |
7672726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 20913181 - 20913237
Alignment:
| Q |
3 |
catgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgt |
59 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||| |||||| |||||||| |
|
|
| T |
20913181 |
catgattaagaggtcgtagttgcattttgtcgagatggtctaagatgaataagatgt |
20913237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 32215340 - 32215372
Alignment:
| Q |
52 |
taagatgtctaagttgcattgtcgagttgaagt |
84 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
32215340 |
taagatgtctaagttgcatagtcgagttgaagt |
32215372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1283 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold1283
Description:
Target: scaffold1283; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 1713 - 1846
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1713 |
tgcatgattaagaagtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
1812 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
1813 |
agttgttatttacccatgtgtcgttaatgaagtg |
1846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 125; Significance: 1e-64; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 31733632 - 31733500
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31733632 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtagtgtcgttgttgtta |
31733533 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagt |
133 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
31733532 |
agttgttatttacccatgtgtcgttaatgaagt |
31733500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17319238 - 17319371
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17319238 |
tgcatgattaagaggtcgtagttgcattttgtctagatggatcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
17319337 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |
|
|
| T |
17319338 |
aattgttatttacccatgtgtcgttaatgaagtg |
17319371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18708340 - 18708206
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18708340 |
tgcatgattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtatgatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
18708241 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||| |
|
|
| T |
18708240 |
agttgttatttatccatgtgtcattaatgaagtgc |
18708206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 27573446 - 27573575
Alignment:
| Q |
6 |
gattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaagttg |
105 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27573446 |
gattaagaggtcgtagttgcattttgtctagatggttcaagatgtgtaagatgtctaagtttcattgtcgagttgaagtcgtgtcgttgttgttaagttg |
27573545 |
T |
|
| Q |
106 |
ttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||| |||||||||||||||||||||||||| |
|
|
| T |
27573546 |
ttaattacccatgtgtcgttaatgaagtgc |
27573575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18822218 - 18822348
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||| ||||| |||||| |||||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
18822218 |
tgcatgattaagaggtagtagtcgcatttcgtctagatggttcaagaggtatgagatgtctaacttgcattgtcgagttgaagtcgtgtcgttgttgtta |
18822317 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaa |
131 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| |
|
|
| T |
18822318 |
agttgttaattacccacgtgtcgttaatgaa |
18822348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 18319515 - 18319406
Alignment:
| Q |
3 |
catgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaag |
102 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||| |||||| ||||| ||||||| || ||||| ||||||||| || |||||||||||||| |
|
|
| T |
18319515 |
catgattaagaggtcgtagttgcattttgtcgagatggtctaagatgaataagaagtctaagatgtattgttaagttgaagttgtatcgttgttgttaag |
18319416 |
T |
|
| Q |
103 |
ttgttattta |
112 |
Q |
| |
|
|| ||||||| |
|
|
| T |
18319415 |
ttattattta |
18319406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 124; Significance: 6e-64; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 21309137 - 21309268
Alignment:
| Q |
4 |
atgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaagt |
103 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21309137 |
atgattaagaggtcatagttgcattttgtctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaagt |
21309236 |
T |
|
| Q |
104 |
tgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
21309237 |
tgttatttacccatgtgtcgttaatgaagtgc |
21309268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19920599 - 19920465
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19920599 |
tgcatgattaagaggtcgtagtagcattttgtctagatggttcaagatgtgtaagttgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
19920500 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
19920499 |
agttgttatttacccatgtgtcgttaatgaagtgc |
19920465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 13536522 - 13536655
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||| || ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13536522 |
tgcatgattaagatgtggtagttgcattttgtctagatggttcaagatgtgtatgatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
13536621 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
13536622 |
agttgttatttacccatgtgtcgttaatgaagtg |
13536655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 18418314 - 18418203
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | ||| ||| |||||| ||||| |||||||||||||||| ||||||||| |||||||||||| || |
|
|
| T |
18418314 |
tgcatgattaagaggtcgtaattgcattttgacaagagggtctaagatgaataagaagtctaagttgcattgttaagttgaagttgtgtcgttgttgata |
18418215 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
18418214 |
agttgttattta |
18418203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 40725611 - 40725499
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || ||||||| |||||| ||||| |||||||||||||||| ||||||||| |||||||||| || |
|
|
| T |
40725611 |
tgcatgattaagaggttgtagttgcatttttgtcaagatggtctaagatgaataagaggtctaagttgcattgttaagttgaagttgtgtcgttgtgatt |
40725512 |
T |
|
| Q |
100 |
aagttgttattta |
112 |
Q |
| |
|
||||||||||||| |
|
|
| T |
40725511 |
aagttgttattta |
40725499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 123; Significance: 2e-63; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 48300747 - 48300613
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48300747 |
tgcatgattaagaggtcgtggttgcattttgtctagacggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
48300648 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
48300647 |
agttgttatttacccatgtgtcgttaatgaagtgc |
48300613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 35088359 - 35088225
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35088359 |
tgcatgattaagaggtcgtagttgcattttgtctagattaatgaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
35088260 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
35088259 |
agttgttatttactcatgtgtcgttaaagaagtgc |
35088225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 51274700 - 51274811
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||| |||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
51274700 |
tgcatgattaagaggtcgtagttgcattttgacgagatggtctaagatgaataagaagtctaagttgcattgataagttgaagttgtgtcgttgttgtta |
51274799 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
51274800 |
agttgttattta |
51274811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 76591 - 76460
Alignment:
| Q |
3 |
catgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaag |
102 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
76591 |
catgattaagaggtcgtagttgcattttgtctagatggttcaagatgtataagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaag |
76492 |
T |
|
| Q |
103 |
ttgttatttacccatgtgtcgttaatgaagtg |
134 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |
|
|
| T |
76491 |
ttgttatttacccatgtgtcgttaataaagtg |
76460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 52207 - 52338
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
52207 |
tgcatgattaagaggtcgtagtcgcattttgtctagatggttcaagatgtataagatgtctaagttgcattgtcgagttgaagtcgtgtcgtcgttgtta |
52306 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaag |
132 |
Q |
| |
|
||||||||||||| || ||||||||||||||| |
|
|
| T |
52307 |
agttgttatttactcacgtgtcgttaatgaag |
52338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0503 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0503
Description:
Target: scaffold0503; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 11760 - 11629
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11760 |
tgcatgattaagaggtcgtagtcgcattttgtctagatggttcaagaggtacaagatgtctaagttgcattgtcgagtagaagtcgtgtcgttgttgtta |
11661 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaag |
132 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |
|
|
| T |
11660 |
agttgttatttacccacgtgtcgttaatgaag |
11629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 57684 - 57563
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatcta-gatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
99 |
Q |
| |
|
||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
57684 |
tgcatgattaagaggtcatatttgcattttgtctaagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtt |
57585 |
T |
|
| Q |
100 |
aagttgttatttacccatgtgt |
121 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
57584 |
aagttgttatttacccatgtgt |
57563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 77970 - 77851
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
77970 |
tgcatgattaagaagtcgtggttgcattttgtctagatggttcaagatgtgtaagatgtctgagttgtactgtcgagttgaagtcgtgtcgttgttgtta |
77871 |
T |
|
| Q |
101 |
agttgttatttacccatgtg |
120 |
Q |
| |
|
|||| ||||| ||||||||| |
|
|
| T |
77870 |
agtttttattcacccatgtg |
77851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 20795 - 20925
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||| |||||||||||| |||||| |||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20795 |
tgcatgatttagaggtcgtagtcgcatttcgtctagatggttcaagaggtatgagatgtctatgttgcattgtcgagttgaagtcgtgtcgttgtggtta |
20894 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaa |
131 |
Q |
| |
|
|||||||| ||||||| ||||| |||||||| |
|
|
| T |
20895 |
agttgttaattacccacgtgtcattaatgaa |
20925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 79652 - 79760
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
79652 |
tgcatgattaagaggtcgtagtcgcattttgtctagatggttcaagaggtataagatgtctaagttgcattgtcgagttgaagtcgtgtcattaatgtta |
79751 |
T |
|
| Q |
101 |
agttgttat |
109 |
Q |
| |
|
|||||||| |
|
|
| T |
79752 |
tgttgttat |
79760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0071 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0071
Description:
Target: scaffold0071; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14075 - 13941
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||| ||||||||||||||| || ||||||| |||||| ||||| || ||||||| ||||| ||||||||| ||||||||||||| | |
|
|
| T |
14075 |
tgcatgattaagagatcgtagttgcattttgtcgagatggtctaagatgaataagaagtttaagttgtattgttaagttgaagttgtgtcgttgttgtca |
13976 |
T |
|
| Q |
101 |
agttgttatttacccatgtgtcgttaatgaagtgc |
135 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||| |
|
|
| T |
13975 |
cgttgttatttatccatgtgtcgttaacgaagtgc |
13941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23882 - 23993
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||| | |||| ||||| ||||||| || ||||| |||||||||| || ||||| |||||| |
|
|
| T |
23882 |
tgcatgattaagaggtcgtagttgcattttgtcgagatggtctatgatgaataagaagtctaagatgtattgttgagttgaagttgtatcgttattgtta |
23981 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23982 |
agttgttattta |
23993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 20954 - 21063
Alignment:
| Q |
3 |
catgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgttaag |
102 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||| |||||| ||||| ||||||| || ||||| ||||||||| || |||||||||||||| |
|
|
| T |
20954 |
catgattaagaggtcgtagttgcattttgtcgagatggtctaagatgaataagaagtctaagatgtattgttaagttgaagttgtatcgttgttgttaag |
21053 |
T |
|
| Q |
103 |
ttgttattta |
112 |
Q |
| |
|
|| ||||||| |
|
|
| T |
21054 |
ttattattta |
21063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1351 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold1351
Description:
Target: scaffold1351; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1283 - 1172
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgttgttgtta |
100 |
Q |
| |
|
||||||||||||| |||||||||||||| | | |||||| |||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
1283 |
tgcatgattaagatgtcgtagttgcattgtgacgtgatggtctaagatgaataagaagtctaagttgcattgataagttgaagttgtgtcgttgttgtta |
1184 |
T |
|
| Q |
101 |
agttgttattta |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
1183 |
agttgttattta |
1172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0111
Description:
Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7198 - 7144
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaag |
55 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||| |
|
|
| T |
7198 |
tgcatgattaagaggccgtagttgcattttgtctagatggtttaagatgtctaag |
7144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0111; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14317 - 14263
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcattttatctagatggttcaagatgtgtaag |
55 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||| |
|
|
| T |
14317 |
tgcatgattaagaggccgtagttgcattttgtctagatggtttaagatgtctaag |
14263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0098
Description:
Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34747 - 34655
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgt |
92 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
34747 |
tgcatgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagttgtgtcgt |
34655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 74449 - 74357
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgt |
92 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
74449 |
tgcatgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagttgtgtcgt |
74357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 95186 - 95137
Alignment:
| Q |
42 |
tcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcg |
91 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
95186 |
tcaagatgattaagatgtcgaagttgcattgtcaagttgaagtcgtgtcg |
95137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0235 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0235
Description:
Target: scaffold0235; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 13160 - 13076
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagt |
84 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
13160 |
tgcatgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagt |
13076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0235; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 24862 - 24778
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagt |
84 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| |||||||||||||||| ||||||||| |
|
|
| T |
24862 |
tgcatgattaagaggttgtagttgcatttttgtcaagaaggtctaagatgaataagaggtctaagttgcattgttaagttgaagt |
24778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0192 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0192
Description:
Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9686 - 9594
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgca-ttttatctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgt |
92 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || ||| ||| |||||| ||||| ||||||| |||||||| ||||||||| ||||||| |
|
|
| T |
9686 |
tgcatgattaagaggttgtagttgcatttttttcaagagggtctaagatgaataagaggtctaagctgcattgttaagttgaagttgtgtcgt |
9594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8815 - 8907
Alignment:
| Q |
1 |
tgcatgattaagaggtcgtagttgcatttta-tctagatggttcaagatgtgtaagatgtctaagttgcattgtcgagttgaagtcgtgtcgt |
92 |
Q |
| |
|
||||||||||||| |||||||||||||||| || ||| ||| |||| | ||||| |||||||||||||||| ||||||||| ||||||| |
|
|
| T |
8815 |
tgcatgattaagatgtcgtagttgcatttttgtcaagagggtctaagaagaataagaggtctaagttgcattgttaagttgaagttgtgtcgt |
8907 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0151 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:
Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 24032 - 23986
Alignment:
| Q |
87 |
tgtcgttgttgttaagttgttatttacccatgtgtcgttaatgaagt |
133 |
Q |
| |
|
||||||||||||||||||||||| || ||||| || ||||||||||| |
|
|
| T |
24032 |
tgtcgttgttgttaagttgttatctatccatgagttgttaatgaagt |
23986 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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