View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3114_high_107 (Length: 223)
Name: NF3114_high_107
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3114_high_107 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 49812911 - 49813100
Alignment:
| Q |
19 |
aacatgtacatgcatgttagtaaaccactataatatcacatatttaatataacaaaacagttaataatttaaaaaagtatatatagttctatcaggtaca |
118 |
Q |
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| T |
49812911 |
aacatgtacatgcatgttagtaaaccactataatatcacatatttaatataacaaaacagttaataatttaaaaaagtatatatagttctatcaggtaca |
49813010 |
T |
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| Q |
119 |
cctgtgagatataaataccaaatatatgtactatatagccaaattgcaaatatcgtatgcatttaccccggcaaaaacttgtgatctgtg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
49813011 |
cctgtgagatataaataccaaatatatgtactatatagccaaattgcaaaaatcgtatgcatttaccccggcaaaaacttgtgatctgtg |
49813100 |
T |
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