View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3114_high_80 (Length: 250)
Name: NF3114_high_80
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3114_high_80 |
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Alignment Details
Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 46484656 - 46484747
Alignment:
| Q |
12 |
tagcaataatgaggtaaaagttcaataaatacggaaatatttaaagataaagattagattgatctcaaaataagtcaccaaatagtaatgcatacac |
108 |
Q |
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| T |
46484656 |
tagcaataatgtggtacaagttcaa-----acggaaatatttaaagataaagattagattgatctcaaaataagtcaccaaatagtaatgcatacac |
46484747 |
T |
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