View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3114_high_98 (Length: 236)
Name: NF3114_high_98
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3114_high_98 |
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Alignment Details
Target: chr2 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 42696576 - 42696736
Alignment:
| Q |
60 |
aactgtttttccctcatcaaacaaaccataaaagatctaagttcaatttcacttaaatgttggttaactatatttactgtacataagtctttattgaatt |
159 |
Q |
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| T |
42696576 |
aactgtttttccctcatcaaacaaaccataaaagatctaagttcaatttcacttaaatattggttaactatatttattgtacataagtctttattgaatt |
42696675 |
T |
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| Q |
160 |
atcccttactatatatagcgaattaatgcaagccctcaatacatagaatttgtttgaaaat |
220 |
Q |
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| T |
42696676 |
atcccttactatatatagcgaattaatacaagccctcaatacatagaatttgtttgaaaat |
42696736 |
T |
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