View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3114_low_12 (Length: 517)

Name: NF3114_low_12
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3114_low_12
NF3114_low_12
[»] chr4 (70 HSPs)
chr4 (28-244)||(49488059-49488270)
chr4 (257-370)||(49487637-49487752)
chr4 (370-498)||(38417547-38417672)
chr4 (397-502)||(34438424-34438529)
chr4 (392-501)||(34439654-34439763)
chr4 (391-502)||(44159097-44159208)
chr4 (392-498)||(50531753-50531859)
chr4 (397-486)||(17319060-17319149)
chr4 (390-484)||(26393138-26393232)
chr4 (370-498)||(33377361-33377486)
chr4 (371-502)||(11114973-11115101)
chr4 (390-502)||(28103479-28103591)
chr4 (398-502)||(35787815-35787919)
chr4 (390-502)||(52658922-52659034)
chr4 (391-502)||(41349518-41349629)
chr4 (370-491)||(56000281-56000399)
chr4 (370-502)||(11113736-11113865)
chr4 (390-472)||(30682731-30682813)
chr4 (370-466)||(41348233-41348326)
chr4 (370-498)||(44128331-44128456)
chr4 (370-502)||(53400179-53400308)
chr4 (397-502)||(50530521-50530626)
chr4 (388-502)||(11094535-11094649)
chr4 (397-491)||(21104314-21104408)
chr4 (370-502)||(31711086-31711215)
chr4 (371-502)||(47668590-47668718)
chr4 (392-452)||(43418046-43418106)
chr4 (391-486)||(43419384-43419479)
chr4 (395-502)||(52660207-52660314)
chr4 (370-498)||(3217606-3217731)
chr4 (397-502)||(3533601-3533706)
chr4 (371-502)||(38370277-38370405)
chr4 (397-486)||(44304988-44305077)
chr4 (390-486)||(27408774-27408870)
chr4 (370-488)||(37560306-37560421)
chr4 (390-454)||(47242963-47243027)
chr4 (390-502)||(48207710-48207822)
chr4 (370-456)||(5417298-5417381)
chr4 (397-488)||(15787509-15787600)
chr4 (424-486)||(5687220-5687282)
chr4 (412-486)||(5688646-5688720)
chr4 (370-498)||(6138991-6139116)
chr4 (370-502)||(15446663-15446792)
chr4 (370-502)||(15786946-15787075)
chr4 (370-502)||(33376212-33376341)
chr4 (370-502)||(46796019-46796148)
chr4 (390-455)||(96721-96786)
chr4 (391-456)||(11482808-11482873)
chr4 (397-502)||(38419010-38419115)
chr4 (425-502)||(56296239-56296316)
chr4 (390-498)||(1273430-1273537)
chr4 (412-488)||(27410690-27410764)
chr4 (390-466)||(30683056-30683132)
chr4 (390-502)||(39592282-39592394)
chr4 (412-483)||(29663676-29663746)
chr4 (397-488)||(55953859-55953950)
chr4 (371-460)||(56001303-56001389)
chr4 (370-502)||(6616204-6616333)
chr4 (398-487)||(10403298-10403387)
chr4 (397-454)||(17494145-17494202)
chr4 (391-456)||(47573683-47573748)
chr4 (446-502)||(6140353-6140409)
chr4 (426-502)||(48206207-48206283)
chr4 (424-488)||(55952870-55952934)
chr4 (390-453)||(42713474-42713537)
chr4 (396-498)||(26788539-26788641)
chr4 (370-430)||(44160475-44160532)
chr4 (433-502)||(26121924-26121993)
chr4 (434-491)||(31712510-31712567)
chr4 (399-456)||(50497015-50497072)
[»] chr8 (68 HSPs)
chr8 (397-502)||(13367043-13367148)
chr8 (391-502)||(8095358-8095469)
chr8 (385-491)||(24069450-24069556)
chr8 (388-502)||(34616138-34616257)
chr8 (397-454)||(41521335-41521392)
chr8 (394-502)||(7486092-7486200)
chr8 (390-502)||(37276236-37276348)
chr8 (370-502)||(2421286-2421414)
chr8 (391-502)||(22619907-22620018)
chr8 (370-502)||(45385787-45385916)
chr8 (390-486)||(19914915-19915011)
chr8 (370-488)||(31623900-31624015)
chr8 (390-486)||(36940042-36940138)
chr8 (390-498)||(41866905-41867013)
chr8 (371-456)||(35463028-35463110)
chr8 (392-491)||(37472416-37472515)
chr8 (371-488)||(38591014-38591128)
chr8 (374-502)||(19913490-19913615)
chr8 (397-502)||(31871410-31871518)
chr8 (370-502)||(36756058-36756187)
chr8 (397-491)||(41522692-41522786)
chr8 (371-466)||(22621163-22621255)
chr8 (390-502)||(37274898-37275010)
chr8 (397-491)||(20308623-20308717)
chr8 (397-491)||(21095256-21095350)
chr8 (370-502)||(24068324-24068453)
chr8 (412-486)||(29739652-29739726)
chr8 (390-456)||(35462678-35462744)
chr8 (397-502)||(117066-117171)
chr8 (371-502)||(29738286-29738414)
chr8 (392-488)||(8096552-8096648)
chr8 (412-488)||(36070211-36070287)
chr8 (397-488)||(31625391-31625482)
chr8 (370-483)||(38589815-38589924)
chr8 (392-483)||(45194496-45194587)
chr8 (370-502)||(37979-38108)
chr8 (397-499)||(36071374-36071476)
chr8 (391-456)||(23768524-23768589)
chr8 (393-486)||(27750630-27750723)
chr8 (390-487)||(35945445-35945542)
chr8 (397-502)||(39546670-39546775)
chr8 (412-488)||(37474043-37474119)
chr8 (391-502)||(34617188-34617299)
chr8 (371-502)||(35943902-35944031)
chr8 (392-486)||(45195813-45195907)
chr8 (390-499)||(16363808-16363917)
chr8 (391-456)||(22914229-22914294)
chr8 (390-491)||(39515210-39515311)
chr8 (397-486)||(43277930-43278019)
chr8 (390-467)||(43386730-43386807)
chr8 (390-486)||(1570215-1570311)
chr8 (442-502)||(8395058-8395118)
chr8 (392-456)||(16346112-16346176)
chr8 (391-455)||(31872844-31872908)
chr8 (370-488)||(43275744-43275859)
chr8 (397-456)||(9190481-9190540)
chr8 (412-467)||(44606172-44606227)
chr8 (391-465)||(4807378-4807452)
chr8 (72-122)||(14195677-14195727)
chr8 (72-118)||(45338511-45338557)
chr8 (397-454)||(7770938-7770995)
chr8 (399-456)||(12820137-12820194)
chr8 (390-475)||(14820204-14820289)
chr8 (397-502)||(39220697-39220802)
chr8 (371-462)||(41867949-41868037)
chr8 (392-456)||(4534047-4534111)
chr8 (391-435)||(12818766-12818810)
chr8 (442-502)||(36938744-36938804)
[»] chr5 (58 HSPs)
chr5 (391-502)||(15857611-15857722)
chr5 (391-502)||(32734144-32734254)
chr5 (370-502)||(42510108-42510237)
chr5 (371-502)||(12830931-12831059)
chr5 (397-502)||(12862911-12863016)
chr5 (371-486)||(18677971-18678083)
chr5 (392-486)||(1663200-1663294)
chr5 (397-487)||(22819557-22819647)
chr5 (390-466)||(8188229-8188305)
chr5 (390-486)||(19523994-19524089)
chr5 (397-498)||(32735476-32735577)
chr5 (397-502)||(40058036-40058141)
chr5 (392-500)||(326357-326465)
chr5 (392-484)||(42511677-42511769)
chr5 (390-485)||(40059338-40059433)
chr5 (412-502)||(5384339-5384429)
chr5 (370-502)||(19525281-19525410)
chr5 (429-502)||(38473548-38473621)
chr5 (392-496)||(26403320-26403424)
chr5 (397-485)||(27894033-27894121)
chr5 (392-491)||(12933764-12933863)
chr5 (392-491)||(12947925-12948024)
chr5 (157-220)||(13944561-13944624)
chr5 (392-502)||(12936095-12936205)
chr5 (397-486)||(19827149-19827238)
chr5 (393-502)||(38471303-38471412)
chr5 (390-502)||(1273100-1273212)
chr5 (390-498)||(10085842-10085950)
chr5 (362-500)||(15510258-15510393)
chr5 (390-502)||(18693709-18693821)
chr5 (390-502)||(21387648-21387760)
chr5 (390-502)||(22812380-22812492)
chr5 (429-500)||(15614955-15615026)
chr5 (391-454)||(39135689-39135752)
chr5 (429-488)||(42979498-42979557)
chr5 (388-454)||(224631-224697)
chr5 (370-434)||(12829564-12829625)
chr5 (412-502)||(12950253-12950343)
chr5 (391-456)||(11907200-11907265)
chr5 (429-502)||(15613555-15613628)
chr5 (429-502)||(42980702-42980775)
chr5 (392-502)||(223238-223349)
chr5 (370-434)||(12861543-12861604)
chr5 (437-502)||(2167508-2167572)
chr5 (419-488)||(26404217-26404286)
chr5 (397-502)||(26912331-26912436)
chr5 (390-502)||(5975767-5975879)
chr5 (392-456)||(8284283-8284347)
chr5 (392-488)||(24761728-24761824)
chr5 (413-500)||(4566985-4567072)
chr5 (390-437)||(29906127-29906174)
chr5 (390-488)||(8762407-8762505)
chr5 (397-426)||(7427993-7428022)
chr5 (391-456)||(24070417-24070482)
chr5 (390-466)||(18695676-18695752)
chr5 (365-502)||(21389136-21389268)
chr5 (308-340)||(28398236-28398268)
chr5 (398-454)||(30253605-30253661)
[»] chr2 (45 HSPs)
chr2 (370-502)||(14509203-14509332)
chr2 (385-498)||(3533623-3533736)
chr2 (370-491)||(7036960-7037078)
chr2 (391-482)||(14510522-14510613)
chr2 (401-504)||(21012071-21012174)
chr2 (371-502)||(23177668-23177797)
chr2 (371-502)||(23588925-23589054)
chr2 (393-454)||(7982326-7982387)
chr2 (371-502)||(37867751-37867879)
chr2 (390-502)||(23178875-23178987)
chr2 (390-502)||(23590132-23590244)
chr2 (390-502)||(35801038-35801150)
chr2 (370-502)||(25570863-25570992)
chr2 (397-502)||(7490188-7490293)
chr2 (397-490)||(7983700-7983793)
chr2 (390-498)||(2581814-2581922)
chr2 (394-502)||(11386639-11386747)
chr2 (391-455)||(15850124-15850188)
chr2 (390-502)||(32614396-32614508)
chr2 (390-486)||(37869049-37869145)
chr2 (397-495)||(3532212-3532310)
chr2 (370-502)||(6706920-6707049)
chr2 (370-502)||(42246585-42246714)
chr2 (397-498)||(4829483-4829584)
chr2 (413-486)||(12852920-12852993)
chr2 (371-468)||(12854131-12854225)
chr2 (397-502)||(12958434-12958539)
chr2 (391-468)||(15850686-15850763)
chr2 (390-486)||(10368394-10368490)
chr2 (391-435)||(25569781-25569825)
chr2 (390-502)||(28109862-28109974)
chr2 (438-502)||(40174757-40174821)
chr2 (397-488)||(12959712-12959803)
chr2 (370-498)||(42027187-42027312)
chr2 (429-486)||(1624985-1625042)
chr2 (429-486)||(6209074-6209130)
chr2 (390-499)||(29424608-29424717)
chr2 (370-460)||(7038367-7038454)
chr2 (390-473)||(3528287-3528370)
chr2 (397-456)||(33553404-33553463)
chr2 (392-455)||(41795992-41796055)
chr2 (399-456)||(20630710-20630767)
chr2 (397-454)||(39272251-39272308)
chr2 (429-486)||(42028967-42029024)
chr2 (371-437)||(42249846-42249909)
[»] scaffold0098 (2 HSPs)
scaffold0098 (391-498)||(42343-42450)
scaffold0098 (389-502)||(40926-41031)
[»] chr1 (61 HSPs)
chr1 (397-502)||(36509829-36509934)
chr1 (392-501)||(36511325-36511434)
chr1 (392-502)||(14169632-14169742)
chr1 (389-502)||(14764239-14764352)
chr1 (400-502)||(19466198-19466300)
chr1 (397-502)||(40109379-40109484)
chr1 (398-486)||(19464619-19464707)
chr1 (391-502)||(51726837-51726948)
chr1 (370-502)||(14071196-14071325)
chr1 (370-498)||(14765091-14765216)
chr1 (370-498)||(25785962-25786087)
chr1 (397-502)||(22167797-22167902)
chr1 (390-502)||(13930668-13930780)
chr1 (391-502)||(40812604-40812715)
chr1 (390-488)||(42248312-42248410)
chr1 (370-500)||(14390252-14390379)
chr1 (390-502)||(26056140-26056252)
chr1 (390-497)||(3979311-3979418)
chr1 (391-502)||(24517607-24517718)
chr1 (370-466)||(40110681-40110774)
chr1 (397-486)||(13641275-13641364)
chr1 (413-486)||(26054931-26055004)
chr1 (401-502)||(26801965-26802066)
chr1 (371-502)||(49141489-49141617)
chr1 (370-488)||(3978038-3978153)
chr1 (390-502)||(9633786-9633898)
chr1 (390-486)||(47410995-47411091)
chr1 (391-502)||(40811207-40811318)
chr1 (391-486)||(51725355-51725450)
chr1 (412-502)||(9592271-9592361)
chr1 (390-488)||(13929306-13929404)
chr1 (370-498)||(25787161-25787286)
chr1 (397-502)||(2973001-2973106)
chr1 (391-476)||(38283758-38283843)
chr1 (390-486)||(52181314-52181410)
chr1 (391-498)||(8092610-8092717)
chr1 (416-483)||(14171280-14171347)
chr1 (391-454)||(24516346-24516409)
chr1 (390-504)||(21277005-21277119)
chr1 (370-486)||(47560133-47560246)
chr1 (429-486)||(16217490-16217547)
chr1 (429-502)||(20953338-20953411)
chr1 (391-451)||(26803260-26803320)
chr1 (390-454)||(45042620-45042684)
chr1 (390-502)||(50679814-50679926)
chr1 (370-454)||(43808562-43808643)
chr1 (370-498)||(47136684-47136809)
chr1 (371-483)||(47411460-47411569)
chr1 (421-486)||(16218487-16218552)
chr1 (391-456)||(30743099-30743164)
chr1 (391-456)||(43807447-43807512)
chr1 (370-500)||(2237973-2238100)
chr1 (372-454)||(38280846-38280925)
chr1 (390-454)||(48467272-48467336)
chr1 (390-502)||(49139812-49139924)
chr1 (392-434)||(22169280-22169322)
chr1 (370-473)||(2236807-2236907)
chr1 (390-451)||(34653446-34653507)
chr1 (391-435)||(21246535-21246579)
chr1 (424-496)||(48332760-48332832)
chr1 (390-454)||(52437919-52437983)
[»] chr6 (26 HSPs)
chr6 (390-502)||(31740265-31740377)
chr6 (392-502)||(14328767-14328877)
chr6 (392-502)||(14421777-14421887)
chr6 (370-502)||(31738357-31738486)
chr6 (370-488)||(5311273-5311388)
chr6 (390-502)||(33802010-33802122)
chr6 (390-498)||(8412313-8412421)
chr6 (397-496)||(14326171-14326270)
chr6 (397-496)||(14419181-14419280)
chr6 (397-486)||(22299912-22300001)
chr6 (412-488)||(293647-293723)
chr6 (390-502)||(27440168-27440280)
chr6 (391-488)||(33129293-33129387)
chr6 (388-486)||(9927615-9927712)
chr6 (391-465)||(13800043-13800117)
chr6 (397-502)||(33807707-33807812)
chr6 (397-488)||(8411104-8411195)
chr6 (397-456)||(1693020-1693079)
chr6 (371-456)||(1757533-1757615)
chr6 (397-438)||(5693644-5693685)
chr6 (397-442)||(16269821-16269866)
chr6 (391-452)||(27108217-27108278)
chr6 (391-452)||(27150014-27150075)
chr6 (371-481)||(34084148-34084253)
chr6 (390-502)||(18139480-18139592)
chr6 (390-486)||(27438801-27438897)
[»] chr3 (69 HSPs)
chr3 (397-491)||(21127943-21128037)
chr3 (397-502)||(43345337-43345442)
chr3 (391-502)||(23559831-23559942)
chr3 (397-502)||(35174375-35174480)
chr3 (397-486)||(43346456-43346545)
chr3 (390-486)||(51825630-51825726)
chr3 (370-487)||(11220666-11220780)
chr3 (397-476)||(23561144-23561223)
chr3 (370-502)||(47855331-47855460)
chr3 (397-502)||(32980445-32980550)
chr3 (371-497)||(54653964-54654087)
chr3 (391-502)||(12062377-12062488)
chr3 (370-503)||(42633878-42634008)
chr3 (392-498)||(35173160-35173266)
chr3 (390-505)||(49121992-49122107)
chr3 (370-502)||(8371214-8371343)
chr3 (413-502)||(29536748-29536837)
chr3 (397-502)||(48866159-48866264)
chr3 (386-454)||(38639025-38639093)
chr3 (390-502)||(51400226-51400338)
chr3 (387-475)||(51401371-51401459)
chr3 (391-502)||(48867423-48867534)
chr3 (371-502)||(7820385-7820513)
chr3 (433-502)||(29537135-29537204)
chr3 (371-498)||(42632701-42632825)
chr3 (393-502)||(49334330-49334439)
chr3 (370-488)||(41386124-41386239)
chr3 (392-488)||(47808113-47808209)
chr3 (370-488)||(54752610-54752725)
chr3 (397-456)||(4067944-4068003)
chr3 (392-502)||(25583127-25583237)
chr3 (390-488)||(36626742-36626840)
chr3 (397-502)||(26798899-26799004)
chr3 (391-456)||(39531855-39531920)
chr3 (413-498)||(47806852-47806936)
chr3 (390-486)||(53808329-53808425)
chr3 (412-483)||(10986685-10986756)
chr3 (397-496)||(10987652-10987751)
chr3 (397-484)||(13077962-13078049)
chr3 (371-455)||(7921683-7921764)
chr3 (398-488)||(19253009-19253099)
chr3 (397-451)||(32999815-32999869)
chr3 (398-456)||(33000839-33000897)
chr3 (370-498)||(41387430-41387555)
chr3 (390-463)||(8372648-8372721)
chr3 (397-502)||(39133035-39133140)
chr3 (390-483)||(43101905-43101998)
chr3 (397-498)||(43103293-43103394)
chr3 (397-502)||(49333001-49333106)
chr3 (391-456)||(50150733-50150798)
chr3 (390-486)||(11219441-11219537)
chr3 (392-488)||(12060671-12060767)
chr3 (371-473)||(19579316-19579415)
chr3 (389-453)||(46688417-46688481)
chr3 (391-454)||(1031828-1031891)
chr3 (390-501)||(19622016-19622127)
chr3 (389-452)||(45730647-45730710)
chr3 (371-455)||(17350142-17350223)
chr3 (390-460)||(30432647-30432717)
chr3 (390-500)||(52293518-52293628)
chr3 (429-486)||(2124079-2124136)
chr3 (390-451)||(11483031-11483092)
chr3 (391-456)||(39530807-39530872)
chr3 (370-473)||(53047891-53047991)
chr3 (397-454)||(53901587-53901644)
chr3 (390-502)||(17345322-17345433)
chr3 (370-460)||(23886694-23886781)
chr3 (446-502)||(25585826-25585882)
chr3 (390-466)||(48252944-48253020)
[»] chr7 (62 HSPs)
chr7 (391-502)||(35315215-35315326)
chr7 (370-494)||(4167445-4167566)
chr7 (397-502)||(24873590-24873695)
chr7 (370-501)||(46457064-46457192)
chr7 (390-498)||(19279609-19279717)
chr7 (390-502)||(43930330-43930442)
chr7 (392-498)||(10257385-10257489)
chr7 (390-485)||(45719626-45719721)
chr7 (412-502)||(46458706-46458796)
chr7 (371-486)||(22744741-22744853)
chr7 (390-502)||(4858337-4858449)
chr7 (390-498)||(22746317-22746425)
chr7 (370-488)||(46674941-46675056)
chr7 (412-502)||(14206706-14206796)
chr7 (412-502)||(14215396-14215486)
chr7 (392-502)||(27899207-27899317)
chr7 (397-454)||(4168890-4168947)
chr7 (371-502)||(14107827-14107955)
chr7 (371-502)||(14417784-14417912)
chr7 (371-486)||(25153653-25153765)
chr7 (393-454)||(29345119-29345180)
chr7 (390-454)||(29408257-29408321)
chr7 (392-488)||(40926526-40926622)
chr7 (390-502)||(43936133-43936245)
chr7 (371-488)||(19278348-19278462)
chr7 (419-502)||(48754036-48754119)
chr7 (370-466)||(132028-132121)
chr7 (398-488)||(7146799-7146888)
chr7 (397-454)||(35483591-35483649)
chr7 (412-502)||(40930451-40930541)
chr7 (390-482)||(18802402-18802494)
chr7 (390-502)||(38406029-38406141)
chr7 (397-492)||(10256141-10256236)
chr7 (395-438)||(29409295-29409338)
chr7 (392-498)||(7148055-7148161)
chr7 (433-482)||(7347233-7347282)
chr7 (391-456)||(29344176-29344241)
chr7 (391-468)||(35484337-35484414)
chr7 (397-502)||(41516337-41516442)
chr7 (429-502)||(47163203-47163276)
chr7 (390-486)||(25154945-25155041)
chr7 (390-482)||(43007662-43007754)
chr7 (370-502)||(13446651-13446780)
chr7 (392-482)||(22061808-22061898)
chr7 (446-488)||(35128198-35128240)
chr7 (397-502)||(4857219-4857324)
chr7 (397-462)||(27897710-27897775)
chr7 (391-456)||(47537079-47537144)
chr7 (402-502)||(13286987-13287087)
chr7 (390-466)||(17288249-17288325)
chr7 (390-462)||(19848867-19848939)
chr7 (370-500)||(33458304-33458430)
chr7 (398-502)||(33459536-33459640)
chr7 (390-482)||(43935196-43935288)
chr7 (412-488)||(46673523-46673598)
chr7 (370-462)||(18801209-18801298)
chr7 (446-496)||(36702949-36702999)
chr7 (370-486)||(43006379-43006492)
chr7 (370-465)||(25532140-25532231)
chr7 (391-456)||(40881103-40881168)
chr7 (370-473)||(41126233-41126333)
chr7 (426-462)||(1970860-1970896)
[»] scaffold1974 (1 HSPs)
scaffold1974 (370-502)||(621-750)
[»] scaffold1878 (1 HSPs)
scaffold1878 (370-502)||(524-653)
[»] scaffold0290 (2 HSPs)
scaffold0290 (370-502)||(9471-9600)
scaffold0290 (390-502)||(8390-8502)
[»] scaffold0122 (2 HSPs)
scaffold0122 (391-488)||(17167-17264)
scaffold0122 (370-502)||(15944-16068)
[»] scaffold0178 (1 HSPs)
scaffold0178 (370-502)||(2258-2387)
[»] scaffold0013 (1 HSPs)
scaffold0013 (370-486)||(96154-96267)
[»] scaffold0025 (1 HSPs)
scaffold0025 (390-502)||(56693-56805)
[»] scaffold0003 (2 HSPs)
scaffold0003 (390-502)||(47081-47193)
scaffold0003 (390-486)||(48465-48561)
[»] scaffold0007 (1 HSPs)
scaffold0007 (412-486)||(145878-145952)
[»] scaffold2127 (1 HSPs)
scaffold2127 (370-498)||(512-637)
[»] scaffold0084 (1 HSPs)
scaffold0084 (390-455)||(11717-11782)
[»] scaffold0046 (2 HSPs)
scaffold0046 (390-467)||(23417-23494)
scaffold0046 (370-455)||(24855-24937)
[»] scaffold0045 (1 HSPs)
scaffold0045 (397-486)||(77190-77279)
[»] scaffold0166 (1 HSPs)
scaffold0166 (392-488)||(4225-4321)
[»] scaffold0096 (1 HSPs)
scaffold0096 (390-433)||(5067-5110)
[»] scaffold0051 (1 HSPs)
scaffold0051 (412-486)||(22161-22234)
[»] scaffold0041 (1 HSPs)
scaffold0041 (391-456)||(85115-85180)
[»] scaffold0009 (1 HSPs)
scaffold0009 (391-456)||(205591-205656)
[»] scaffold0177 (1 HSPs)
scaffold0177 (370-500)||(1749-1876)


Alignment Details
Target: chr4 (Bit Score: 156; Significance: 1e-82; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 28 - 244
Target Start/End: Complemental strand, 49488270 - 49488059
Alignment:
Q  28 ttgaatgatgtcaattaaatactttaattttccttaaataaaaatcatttcatgtgagggtgtgtgtaacaaagttgatttgtgattgtgtccatnnnnn 127  Q
    |||||||||||||||||||||||||     |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||         
T  49488270 ttgaatgatgtcaattaaatacttt-----tccttaaataaaaatcatttcatgcgagggtgtgtctaacaaagttgatttgtgattgtgtccataaaag 49488176  T
Q  128 nntttctcctgcaaaactcaattttgctcttatttgtttttatgccacatcatcacttttgggataaattgtgtccaaaatttactttttgtgacctaga 227  Q
      |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49488175 attttctcctacaaaactcaattttgctcttatttgtttttatgtcgcatcatcacttttgggataaattgtgtccaaaatttactttttgtgacctaga 49488076  T
Q  228 tttgtgaatgataaata 244  Q
    |||||||||||||||||    
T  49488075 tttgtgaatgataaata 49488059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 49487752 - 49487637
Alignment:
Q  257 cacgggagcaatatttgtgagtgatagatattccttaataacgaatataacaa---tatgggaccaatatttgtgagtgataaatattctaattaagtga 353  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||    
T  49487752 cacgggagcaatattcgtgagtgatagatattccttaataacgaatataacaacaatatgg-accaatatttgtgagtgataaatattctaattaagtga 49487654  T
Q  354 tgtatacaattttaaga 370  Q
    |||||||||||||||||    
T  49487653 tgtatacaattttaaga 49487637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 370 - 498
Target Start/End: Original strand, 38417547 - 38417672
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||| ||   |||||||||||||||||||||| |||||||| |||||||||||| |||||| | |||||||||| ||||||||| |||    
T  38417547 aggcttaatacatcctcct---gtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgt 38417643  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    ||||||| |||| |||||| || ||||||    
T  38417644 cgtttactatttcggtcctctccgttagt 38417672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 34438424 - 34438529
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||| | |||||||||| |||||||||||| ||||||| |||||||| || |||||||    
T  34438424 ttaacttattttattttctcagtttagtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgtta 34438523  T
Q  497 gttttt 502  Q
    ||||||    
T  34438524 gttttt 34438529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 392 - 501
Target Start/End: Complemental strand, 34439763 - 34439654
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| ||||| || ||||||||||||||| ||||| |||||||||| |||||||||||| ||||||| ||||||||| | ||    
T  34439763 gtcccttaacttattttattttctcagtgtggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctc 34439664  T
Q  492 tgttagtttt 501  Q
     |||||||||    
T  34439663 cgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 391 - 502
Target Start/End: Original strand, 44159097 - 44159208
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||| | | || ||||||| ||||||  ||||||||| | |    
T  44159097 ggtcctttaacttattttattttttcagtttgatctcttaactattaagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatct 44159196  T
Q  491 ctgttagttttt 502  Q
    | ||||||||||    
T  44159197 ccgttagttttt 44159208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 50531859 - 50531753
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||| |||||| | |||||||||| |||| |||| |||||||||| ||||| ||| ||||    
T  50531859 gtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttc 50531760  T
Q  492 tgttagt 498  Q
    |||||||    
T  50531759 tgttagt 50531753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 17319060 - 17319149
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||| | |||||||||||| ||||||| |||||||||    
T  17319060 ttaacttattttaatttctcagtttgatctcttaactataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtc 17319149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 390 - 484
Target Start/End: Complemental strand, 26393232 - 26393138
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttgg 484  Q
    |||||| |||||||||||| | |||| | |||||||| ||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||    
T  26393232 tggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcgtttaccattttgg 26393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 33377486 - 33377361
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| ||||||||||||     
T  33377486 aggcttaatacatcatt---tggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgc 33377390  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    ||||||| ||||||||||| || ||||||    
T  33377389 cgtttactattttggtcctctccgttagt 33377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 371 - 502
Target Start/End: Complemental strand, 11115101 - 11114973
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||| | | |||||||||| |||| |||||||||    
T  11115101 ggcttaatacatcatt---tggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtc 11115005  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||| ||| || ||||||||||    
T  11115004 gtttaccattttggacctctccgttagttttt 11114973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 28103591 - 28103479
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| | |||||||||| ||||  |||||| ||||||||||||||||||||    
T  28103591 tggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttggtcctt 28103492  T
Q  490 tctgttagttttt 502  Q
    || ||| ||||||    
T  28103491 tccgtttgttttt 28103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 398 - 502
Target Start/End: Original strand, 35787815 - 35787919
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttag 497  Q
    |||||||||||   |||||| |||| |||  |||||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||| || |||||    
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttag 35787914  T
Q  498 ttttt 502  Q
    |||||    
T  35787915 ttttt 35787919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 52658922 - 52659034
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| |||||||||||| | |||||| |||| |||| |||||||||| ||||| |||||||| |||||||||||||| ||||||||| ||| ||| ||    
T  52658922 tggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtcatt 52659021  T
Q  490 tctgttagttttt 502  Q
    || ||| ||||||    
T  52659022 tccgtttgttttt 52659034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 41349629 - 41349518
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| | |||||| | |||||| ||| ||||||||||   | ||||| | | |||||||||    
T  41349629 ggtcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttgatcccataaatcttcctccatttactaatgtggtccttt 41349530  T
Q  491 ctgttagttttt 502  Q
    ||||||||||||    
T  41349529 ctgttagttttt 41349518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 491
Target Start/End: Original strand, 56000281 - 56000399
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   || ||| ||||||||||||   |||||| ||||||||| |||||||||||||| | ||||| ||||||||| |||||||     
T  56000281 aggcttaatacatgctt---tgatcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgc 56000377  T
Q  470 cgtttaccattttggtcctttc 491  Q
    ||||||||||||||||| ||||    
T  56000378 cgtttaccattttggtcttttc 56000399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 11113736 - 11113865
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||  ||||||||||||   |||||| |||  ||||||||||||||||||| | |||||||||  |||| |||||||     
T  11113736 aggcttaatacatcatt---tggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgc 11113832  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||||||| |||| ||||||||||    
T  11113833 cgtttaccattttggtcatttccgttagttttt 11113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 390 - 472
Target Start/End: Original strand, 30682731 - 30682813
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgt 472  Q
    |||||| ||||||||||||   |||||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  30682731 tggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttctgtcgt 30682813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 466
Target Start/End: Original strand, 41348233 - 41348326
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||||||||||||    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | |||||| ||| |||| |||||    
T  41348233 aggcttaatacatccc---ctggtcctttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttgatcccataagtcttc 41348326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 44128456 - 44128331
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||||||||||||||||   |||||| |||| |||| |||||||||||||| | ||||| ||||| |||||||| ||     
T  44128456 aggcttaatacatcgtt---tggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgc 44128360  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    ||||||| ||||||||||| || ||||||    
T  44128359 cgtttactattttggtcctctccgttagt 44128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 53400179 - 53400308
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   ||| || ||||||||||||    ||||| |||| |||| |||||||||||||| | |||||||||||||||||||| |||    
T  53400179 aggcttaatacatgctt---tggccccttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgt 53400275  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||| ||||| || ||||| ||||    
T  53400276 cgtttaccattttagtcctctccgttagatttt 53400308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 50530521 - 50530626
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| |||||||| ||| |||||||| |||||| | ||  |||||| |||| |||||| |||||||| ||||||||| |||||||||    
T  50530521 ttaacttattttattttctcagtttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtta 50530620  T
Q  497 gttttt 502  Q
     |||||    
T  50530621 attttt 50530626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 502
Target Start/End: Original strand, 11094535 - 11094649
Alignment:
Q  388 tctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcc 487  Q
    ||||||||||||| |||||||   |||| | |||| || | |||||||||||||| ||||||||||||||||||| ||||| |||||||  |||||||||    
T  11094535 tctggtcctttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcc 11094634  T
Q  488 tttctgttagttttt 502  Q
    | |  ||||||||||    
T  11094635 tcttcgttagttttt 11094649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 491
Target Start/End: Complemental strand, 21104408 - 21104314
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||| | |||||| |||| |||| |||||||||||||| | |||||||||  |||  ||||||||||||||||||||||||||||||    
T  21104408 ttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggtcctttc 21104314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 31711086 - 31711215
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||    ||||| |||| ||| ||||||||||||||| | |||||||||  |||| |||| |||    
T  31711086 aggcttaatacatcatt---tggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgt 31711182  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||| ||||||| ||| ||||||    
T  31711183 cgtttaccattttgatcctttccgtttgttttt 31711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 502
Target Start/End: Complemental strand, 47668718 - 47668590
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   ||||||||||||||||||| | |||||| |||| |||| |||||||||||||| | || |||||||  || ||| |||| |    
T  47668718 ggcttaatacatcatt---tggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgcc 47668622  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    |||||   |||||||||| |||||||||||||    
T  47668621 gtttattgttttggtcctctctgttagttttt 47668590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 43418046 - 43418106
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttgg 452  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||    
T  43418046 gtcctttaaattattttattttctcagtttggtcccttaactataaagtgtttcaatttgg 43418106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 486
Target Start/End: Complemental strand, 43419479 - 43419384
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||| ||||||||||||||||| |||||||  ||||||||||||||||||| | ||||||||||  ||| ||||||| ||||  | |||||||||    
T  43419479 ggtcccttaacttattttattttctcagtttcgtcccttaactataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtc 43419384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 52660314 - 52660207
Alignment:
Q  395 ctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgt 494  Q
    |||||| ||||||| | |||| | |||| || | |||||||||||| | |||||| ||||| |||||||||||| |||||||||||||| || |||||||    
T  52660314 ctttaatttattttttatttttattttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcatttctgt 52660215  T
Q  495 tagttttt 502  Q
    | ||||||    
T  52660214 ttgttttt 52660207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 3217731 - 3217606
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   || ||| ||||||||||||    ||||| |||| ||| |||||| ||||||||||||||||| ||  |||||||||||||    
T  3217731 aggcttaatacattctt---tgatcccttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgt 3217635  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
     |||||| ||||||||||| || ||||||    
T  3217634 tgtttactattttggtcctatccgttagt 3217606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 3533706 - 3533601
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| || |||| | |||||||||||||| | |||||||||| |||| ||||||   ||||||||||||||||||||| || |    
T  3533706 ttaacttatttttaattttcatttcgatcacctaactataaagtgtctcaatttggtccgataactcttctactgtttaccattttggtcctttccgtca 3533607  T
Q  497 gttttt 502  Q
    ||||||    
T  3533606 gttttt 3533601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 38370277 - 38370405
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| |||| ||   |||| ||||||||| | |||||||||  |||| |||||||||    
T  38370277 ggcttaatacatcgtt---tggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtc 38370373  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||||| | || ||||||||||    
T  38370374 gtttaccattttggtcatctccgttagttttt 38370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 44305077 - 44304988
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||| | |||||| |||| |||| |||||| ||||||| | ||||||||||||||||||||| |  |||||| |||||||||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtc 44304988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 27408774 - 27408870
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||   |||||| |||| ||   |||||||||||||| | |||||||||| |||||||||||  |||||||||||||||||    
T  27408774 tggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtc 27408870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 488
Target Start/End: Complemental strand, 37560421 - 37560306
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||||||  |     
T  37560421 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacga 37560325  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||| || ||||||||    
T  37560324 cgtttactatcttggtcct 37560306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 454
Target Start/End: Original strand, 47242963 - 47243027
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||| ||||||||||||| ||| ||||||| ||||||||||||| || |||||||||||||||    
T  47242963 tggtcccttaacttattttaatttctcagtttaatcccttaactattaaatgttttaatttggtc 47243027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 48207822 - 48207710
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    ||||||||||||||||||| | |||||| |||| || | ||| |||||||||| | ||||||||| ||||| ||||||  ||||||| ||| ||||||      
T  48207822 tggtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtcccc 48207723  T
Q  490 tctgttagttttt 502  Q
    ||||||| |||||    
T  48207722 tctgttatttttt 48207710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 456
Target Start/End: Original strand, 5417298 - 5417381
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||||  ||| |||||| ||||||||||||| |||||||||||| |||||||||||| || ||||| |||||| ||||    
T  5417298 aggcttaatacatc--tct-tggtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaatttgatcct 5417381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 488
Target Start/End: Complemental strand, 15787600 - 15787509
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| ||||||| | |||||| |||| |||| |||||||||||||| | |||||||||| |||| | || || |||||||||||||||||||    
T  15787600 ttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcct 15787509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 424 - 486
Target Start/End: Original strand, 5687220 - 5687282
Alignment:
Q  424 tcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||||||||| | |||||||||| ||||||||| || ||||||| |||||||||    
T  5687220 tcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtc 5687282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 5688720 - 5688646
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| |||| |||| |||||||||||||| | |||||||| | ||||||||| |||||||||| |||||||||    
T  5688720 ttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtc 5688646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 498
Target Start/End: Original strand, 6138991 - 6139116
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||| |   | ||| ||||||||||||||||| |||||||| |||||||| ||| || ||| | |||||||||  |||| |||| |||    
T  6138991 aggcttaatacatcctcc---gatcccttaacttattttattttctcagtttggtcccttaattattaaatgtctcaatttggtctcataactcttatgt 6139087  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
     |||||  ||||||||| | |||||||||    
T  6139088 tgtttattattttggtcatctctgttagt 6139116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 15446792 - 15446663
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| ||   ||| |||||||||||| |||||||||| |||||| ||||      
T  15446792 aggcttaatacatgctt---tggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctac 15446696  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||||||||||| || ||||||||||    
T  15446695 cgtttactattttggtcctctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 15786946 - 15787075
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| |||||||||||| | |||||| |||| |||| |||||||||| ||| | |||||||||| |||| | |||||     
T  15786946 aggcttaatacatcatt---tggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctgc 15787042  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||| || |||| || |||| |||||    
T  15787043 cgtttatcattatgatcctctccgttaattttt 15787075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 33376212 - 33376341
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||  ||||||||||||   |||||| |||  | || ||| |||||||||| | |||||||||| |||||||||||||    
T  33376212 aggcttaatacatcatt---tggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgt 33376308  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||||| ||||| || |||| |||||    
T  33376309 cgtttactattttagtcctctccgttaattttt 33376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 46796148 - 46796019
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||| | |||| |||| |||||||||||||| | |||||||||| |||| |||||       
T  46796148 aggcttaatacatcgtt---tggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctc 46796052  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||| ||||||| || ||||||||||    
T  46796051 cgtttactattgtggtcctctccgttagttttt 46796019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 455
Target Start/End: Complemental strand, 96786 - 96721
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    |||||| |||||||||||||| |||||| |||| |||| |||||||||||||| |||| |||||||    
T  96786 tggtcccttaacttattttatgttttcactttggtcccctaactataaagtgtcttaaattggtcc 96721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 11482808 - 11482873
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| |||||||| |||||||||||| || ||||| |||||||||||    
T  11482808 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11482873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 38419115 - 38419010
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| ||||||| || |||||| ||| |||||| | |||||||||  |||| ||||||| |||||||  |||| ||| | || ||||    
T  38419115 ttaacttattttattttctcagtttaattccttaattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgtta 38419016  T
Q  497 gttttt 502  Q
    ||||||    
T  38419015 gttttt 38419010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 502
Target Start/End: Original strand, 56296239 - 56296316
Alignment:
Q  425 cccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||| |||| ||| |||||||||||| |||| |||| |||||||||||||||||||  |||| ||| ||||||    
T  56296239 cccttaactttaaactgtcttaatttggtcccataattcttttgtcgtttaccattttggtaatttccgtttgttttt 56296316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 1273537 - 1273430
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||| | |||| |||| |||||||||||||| | |||||||||| |||| |||| |||||||| | |||||||||||     
T  1273537 tggtcccttaacttatttttggttttaa-tttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtcctc 1273439  T
Q  490 tctgttagt 498  Q
    || ||||||    
T  1273438 tccgttagt 1273430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 27410764 - 27410690
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||| ||| |||||| ||||||||||||| | |||||||||| |||||||||||  |||||||||||||||||||    
T  27410764 ttttcaatttaatccct-aactataaagtgtctcaatttggtcc-ataaatcttcttccgtttaccattttggtcct 27410690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 30683132 - 30683056
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||| |||| |||||||   |||||| |||| ||||||||||||||||||| | |||||||||| ||||||||||    
T  30683132 tggtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttc 30683056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 39592394 - 39592282
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| |||||||||||||| |||||| |||  |||| |||||||||||||| | || |||||||  ||  |||||||||||||||  ||||||| ||     
T  39592394 tggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctc 39592295  T
Q  490 tctgttagttttt 502  Q
    || |||| |||||    
T  39592294 tccgttaattttt 39592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 29663676 - 29663746
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttg 483  Q
    |||||| |||||||||| ||||||||| ||| | |||||||||| |||| ||||||| ||||||||||||||    
T  29663676 ttttcattttgatccct-aactataaattgtctcaatttggtcccataactcttctgccgtttaccattttg 29663746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 488
Target Start/End: Complemental strand, 55953950 - 55953859
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||||||||   |||||| |||| |||| |||||||||| ||| | ||||||||||  |||||||| || ||||||| |||||||||||    
T  55953950 ttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcct 55953859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 56001389 - 56001303
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataa 460  Q
    |||||||||||| |||   |||||| |||||||||||| | |||||| ||||  ||| |||||||||||||| | |||||||||||||||    
T  56001389 ggcttaatacatgctt---tggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataa 56001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 6616333 - 6616204
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | || |||||||  || || ||||||    
T  6616333 aggcttaatacatcatt---tggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgt 6616237  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||   |||||||||| ||  |||||||||    
T  6616236 cgtttattgttttggtcctctcctttagttttt 6616204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 487
Target Start/End: Original strand, 10403298 - 10403387
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcc 487  Q
    |||||||||||   |||| | |||| |||| |||||||||||||| |||||||||||   ||||||||  ||||||||| ||||||||||    
T  10403298 taacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgtttactattttggtcc 10403387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 17494145 - 17494202
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||| |||||||| ||| ||| |||| |||||||||||| ||||||||||||||||||    
T  17494145 ttaatttattttaatttctcattttggtcccttaactattaagtgttttaatttggtc 17494202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 47573748 - 47573683
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| ||||| || |||||||||||| ||  ||||||||||||||||    
T  47573748 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgttttaatttggtcct 47573683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 502
Target Start/End: Complemental strand, 6140409 - 6140353
Alignment:
Q  446 aatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||| | |||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  6140409 aatttggttccataactcttctgtcgtttactattttggtcatttccgttagttttt 6140353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 502
Target Start/End: Original strand, 48206207 - 48206283
Alignment:
Q  426 ccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||||||||||| |||||| |||||||| | ||||  ||||||| ||||||||| |||  ||||||||||    
T  48206207 ccttaattataaagtgtttcaatttgatcctataacttttctaccgtttactattttggtcatttacgttagttttt 48206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 488
Target Start/End: Original strand, 55952870 - 55952934
Alignment:
Q  424 tcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| |||||||||||||||| |||||||||  |||| |||| |||||||||  |||||||||||    
T  55952870 tcccctaactataaagtgtttcaatttggtctcataactcttatgtcgtttattattttggtcct 55952934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 453
Target Start/End: Original strand, 42713474 - 42713537
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggt 453  Q
    ||||||||||||||| ||  |||||||  ||||||||||||||||| ||| |||| ||||||||    
T  42713474 tggtcctttaacttaattctttttttcgatttgatcccttaactattaagcgtttcaatttggt 42713537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 26788539 - 26788641
Alignment:
Q  396 tttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtt 495  Q
    |||||||||||||   |||||| |||| |||  ||| |||||| | | | ||||| |||| |||||||||||| ||||||| ||||||||||| || |||    
T  26788539 tttaacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtt 26788638  T
Q  496 agt 498  Q
    |||    
T  26788639 agt 26788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 44160532 - 44160475
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatccctta 430  Q
    |||||||||||||||| |   ||||| ||||||||||||||||| |||||||| |||||||    
T  44160532 aggcttaatacatcctcc---ggtcccttaacttattttattttctcagtttggtccctta 44160475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 502
Target Start/End: Original strand, 26121924 - 26121993
Alignment:
Q  433 tataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||| |||||| ||| |||||||| ||||||||||  |||||| ||||| |  |||||||||    
T  26121924 tataaagtgtttcaatttgatcccataaatctcctgtcgtttagtattttgatccttgcaattagttttt 26121993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 491
Target Start/End: Complemental strand, 31712567 - 31712510
Alignment:
Q  434 ataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    ||||||||||| |||||| ||| |||| ||||||  ||||||||||||||||| ||||    
T  31712567 ataaagtgtttcaatttgatcccataagtcttcttccgtttaccattttggtcatttc 31712510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 456
Target Start/End: Original strand, 50497015 - 50497072
Alignment:
Q  399 aacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||| ||| |||||||  | |||||||||| || |||||||||||||||||    
T  50497015 aacttattttaatttctcagtttagttccttaactattaaatgttttaatttggtcct 50497072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 13367148 - 13367043
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| || ||||    
T  13367148 ttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgtta 13367049  T
Q  497 gttttt 502  Q
    ||||||    
T  13367048 gttttt 13367043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 391 - 502
Target Start/End: Original strand, 8095358 - 8095469
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||| |||||| | |||||||||| || | |||| |||||||||| |||||||||||||    
T  8095358 ggtcccttaacttattttattttctcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtccttt 8095457  T
Q  491 ctgttagttttt 502  Q
    | ||||||||||    
T  8095458 ccgttagttttt 8095469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 491
Target Start/End: Complemental strand, 24069556 - 24069450
Alignment:
Q  385 ttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttgg 484  Q
    |||| |||||| ||||||||||||   |||||| |||||||||||||||||||||||| | |||||||||| |||| ||||||| |||||||||||||||    
T  24069556 ttctttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttgg 24069457  T
Q  485 tcctttc 491  Q
    |||||||    
T  24069456 tcctttc 24069450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 388 - 502
Target Start/End: Original strand, 34616138 - 34616257
Alignment:
Q  388 tctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttct-----gtcgtttaccatttt 482  Q
    |||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||| | |||||||||| ||||||||| |     |||||||||||||||    
T  34616138 tctgatcccttaacttattttattttctcagtttgatctcttaactataaagtgtctcaatttggtcccataaatcttttcttttgtcgtttaccatttt 34616237  T
Q  483 ggtcctttctgttagttttt 502  Q
    |||| |||| ||||||||||    
T  34616238 ggtcatttccgttagttttt 34616257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 41521335 - 41521392
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41521335 ttaacttattttattttttcagtttgatcccttaactataaagtgtgttaatttggtc 41521392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 394 - 502
Target Start/End: Original strand, 7486092 - 7486200
Alignment:
Q  394 cctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctg 493  Q
    ||||||| |||||||   |||||| ||||||||||||||||||||||| || |||||||||| ||||||||| ||  |||||| ||||||||||| || |    
T  7486092 cctttaatttatttttggttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccg 7486191  T
Q  494 ttagttttt 502  Q
    |||||||||    
T  7486192 ttagttttt 7486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 37276348 - 37276236
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| |||| |||||||   |||||| |||||||||||||||||||||||| | |||||||||| ||||||||| || ||||||  || ||||||||     
T  37276348 tggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttattatattggtcctc 37276249  T
Q  490 tctgttagttttt 502  Q
    |||||||||||||    
T  37276248 tctgttagttttt 37276236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 2421414 - 2421286
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||    ||| ||| ||||||||||||| ||| |||||||  |||||||| ||| |||||||| |||||||||| | ||||||||||     
T  2421414 aggcttaatacatcc----ctgatcccttaacttattttaatttatcagtttagtcccttaaatattaagtgtttcaatttggtcccagaaatcttctgc 2421319  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||  ||||||||||| | |||||||||||    
T  2421318 cgtttattattttggtcctctttgttagttttt 2421286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 502
Target Start/End: Original strand, 22619907 - 22620018
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| | |||||| | |||||||||| ||||||||||    |||||| | | ||||| |||    
T  22619907 ggtcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatcttcctctgtttactaatgtggtctttt 22620006  T
Q  491 ctgttagttttt 502  Q
    ||||||||||||    
T  22620007 ctgttagttttt 22620018  T

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Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 45385916 - 45385787
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| ||| |||||||||||| |||||| ||||||||||||| |||    
T  45385916 aggcttaatacatgctt---tggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgt 45385820  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||| ||||| || ||||| ||||    
T  45385819 cgtttaccattttagtcctctccgttagatttt 45385787  T

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Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 19915011 - 19914915
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||||||||||   |||||| |||| ||||||||||||||||||| | ||||||  || |||||||||||  |||||||||||||||||    
T  19915011 tggtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtc 19914915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 370 - 488
Target Start/End: Original strand, 31623900 - 31624015
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||||| |||||||||| ||||||||| |||    
T  31623900 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgt 31623996  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||  ||||| |||||    
T  31623997 cgtttattattttagtcct 31624015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 36940138 - 36940042
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||   |||||| ||||||||| |||||||||||||||| ||||||||   |||||||||||| ||||||| |||||||||    
T  36940138 tggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttactattttggtc 36940042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 498
Target Start/End: Original strand, 41866905 - 41867013
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||||||||||||||||||||||||| |||||||||| |||||| ||  | | ||||| ||||||||| |     
T  41866905 tggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatttactattttggtcatc 41867004  T
Q  490 tctgttagt 498  Q
    |||||||||    
T  41867005 tctgttagt 41867013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 35463110 - 35463028
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    |||||||||||||| |   |||||||||||||||||||||||| |||||||||||||||||||||||| ||| | || ||||||||    
T  35463110 ggcttaatacatccgt---tggtcctttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtcct 35463028  T

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Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 392 - 491
Target Start/End: Original strand, 37472416 - 37472515
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||||||||||||||||   |||| | |||| |||  |||||||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||||    
T  37472416 gtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtttaccattttggtcctttc 37472515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 488
Target Start/End: Complemental strand, 38591128 - 38591014
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| ||||||||| || |    
T  38591128 ggcttaatacatcatt---tggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgcc 38591032  T
Q  471 gtttaccattttggtcct 488  Q
    |||||| |||||||||||    
T  38591031 gtttactattttggtcct 38591014  T

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Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 502
Target Start/End: Original strand, 19913490 - 19913615
Alignment:
Q  374 ttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtt 473  Q
    |||||||||||||   |||||| ||||||||||||    ||||| |||| |||  |||||||||||||||| |||||||||| |||| |||||||  |||    
T  19913490 ttaatacatcctt---tggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtt 19913586  T
Q  474 taccattttggtcctttctgttagttttt 502  Q
    || |||||||||||| || ||||||||||    
T  19913587 tatcattttggtcctctccgttagttttt 19913615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 31871410 - 31871518
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataa---agtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctg 493  Q
    ||||||||||||| ||| ||| |||  |||||||| ||| |   ||| |||||||||||||| || ||||||||||||||||  ||||||||||||||||    
T  31871410 ttaacttattttaatttctcaatttagtcccttaaatattactaagtattttaatttggtcccatgaatcttctgtcgtttattattttggtcctttctg 31871509  T
Q  494 ttagttttt 502  Q
    |||||||||    
T  31871510 ttagttttt 31871518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 36756058 - 36756187
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||| | |||| |||| |||||||||||||||| ||| |||||  ||||||||| |||    
T  36756058 aggcttaatacatcatt---tggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgt 36756154  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||||||||| | || ||||||||||    
T  36756155 cgtttactattttggtcatctccgttagttttt 36756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 491
Target Start/End: Complemental strand, 41522786 - 41522692
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    ||||||||||||||||| ||||||| |||  |||||||| |||||| | ||||||||||||||| ||||||| |||||||  |||| ||||||||    
T  41522786 ttaacttattttattttctcagtttaatcatttaactattaagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttc 41522692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 466
Target Start/End: Complemental strand, 22621255 - 22621163
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||||||||||| ||   ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||   |||||||||| |||| |||||    
T  22621255 ggcttaatacatccctc---ggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtggcaatttggtcccataagtcttc 22621163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 37274898 - 37275010
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||| ||||||||||||||    ||||| |||| |||  |||||||||||||| | |||||| ||| |||||||||||| ||||||| |||||||||||     
T  37274898 tggttctttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctc 37274997  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  37274998 tccgttagttttt 37275010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 491
Target Start/End: Original strand, 20308623 - 20308717
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    ||||||||||||||||| |||||||  |  ||||||||| |||||| | |||||||||  |||| ||||||||||||||| ||||||||| ||||    
T  20308623 ttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttc 20308717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 491
Target Start/End: Original strand, 21095256 - 21095350
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    ||||||||||||||||| |||||||  |  ||||||||| |||||| | |||||||||  |||| ||||||||||||||| ||||||||| ||||    
T  21095256 ttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttc 21095350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 24068324 - 24068453
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||| |||||       
T  24068324 aggcttaatacatgctt---tggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctc 24068420  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| | ||||||||| || ||||||||||    
T  24068421 cgtttactaatttggtcctctccgttagttttt 24068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 29739726 - 29739652
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||| |||||||||||||| | |||||||||| |||||| ||||  |||||||||||||||||    
T  29739726 ttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgtttaccattttggtc 29739652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 35462678 - 35462744
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| ||| | || ||||||||    
T  35462678 tggtcctttaacttattttattttctcagtttgatcccttaactgtaaaatgtctcaaattggtcct 35462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 117066 - 117171
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| |||| |||| ||| |||||| ||||| |||||| ||| |||||||||||||||||||   |||||||||| || ||||    
T  117066 ttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgtta 117165  T
Q  497 gttttt 502  Q
    ||||||    
T  117166 gttttt 117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 29738286 - 29738414
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| |||||||||||| | |||||| |||| ||  ||||||||||||||| | ||||| |||  |||| ||||||| |    
T  29738286 ggcttaatacatcgtt---tggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgcc 29738382  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| |||||||||| || ||| ||||||    
T  29738383 gtttacctttttggtcctctccgtttgttttt 29738414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 8096648 - 8096552
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| |||||||||||||||||||||||||  || ||||||||| ||| || |||||||||||  |||| |||| |  ||||||| |||||||||||    
T  8096648 gtcccttaacttattttattttttcagtttagtctcttaactattaagcgtcttaatttggtctcataactcttttaccgtttactattttggtcct 8096552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 36070211 - 36070287
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||| |||| |||| |||||||||||||| | |||||| ||| |||||||||||| ||||||| |||||||||||    
T  36070211 ttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcct 36070287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 488
Target Start/End: Complemental strand, 31625482 - 31625391
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||||||||   |||||| |||| |||| ||| |||||||||| | |||||||||| ||||||||| || ||||||| |||||||||||    
T  31625482 ttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcct 31625391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 483
Target Start/End: Original strand, 38589815 - 38589924
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| |||||||||||| | |||||| |||| |||  |||||||||||||  | |||||||||| ||||||||| |||    
T  38589815 aggcttaatacatcatt---tggtcccttaacttatttt-tgttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgt 38589910  T
Q  470 cgtttaccattttg 483  Q
    ||||||| ||||||    
T  38589911 cgtttactattttg 38589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 483
Target Start/End: Original strand, 45194496 - 45194587
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttg 483  Q
    |||| |||| |||||||| ||||| |||||| ||| |||||||| |||||||||||||| ||  |||||||||| || ||||||| ||||||    
T  45194496 gtcccttaatttattttaattttttagtttggtcctttaactattaagtgttttaatttagtgttataaatcttttgccgtttactattttg 45194587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 37979 - 38108
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| |||||||||||| | |||| | |||  |||| |||||||||||||||| |||||||||  |||| |||||       
T  37979 aggcttaatacatcgtt---tggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctc 38075  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||| ||||||| || ||||||||||    
T  38076 cgtttactattgtggtcctctccgttagttttt 38108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 499
Target Start/End: Complemental strand, 36071476 - 36071374
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||| || | |||||| |||| ||||||||||||| ||| ||| || ||||||| |||| ||||||  |||||| |||||||||| | |||||||    
T  36071476 ttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataactcttctaccgtttatcattttggtcatctctgtta 36071377  T
Q  497 gtt 499  Q
    |||    
T  36071376 gtt 36071374  T

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Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 23768589 - 23768524
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| |||||||||||| |||||| ||||| || |||||||| ||||||||    
T  23768589 ggtcccttaacttattttagtttttcagtttggtcccttcactattaaatgttttaaattggtcct 23768524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 486
Target Start/End: Complemental strand, 27750723 - 27750630
Alignment:
Q  393 tcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||||||   |||||| |||||||| |||| |||||||| | | |||||||||| ||||||||| | | |||||| |||||||||    
T  27750723 tcctttaacttatttttggttttcaatttgatccgttaattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtc 27750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 487
Target Start/End: Complemental strand, 35945542 - 35945445
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcc 487  Q
    |||||| |||||||||||| | |||||| |||  ||||||||||||||| ||| | | |||||||| ||| ||||||||  |||||| ||||||||||    
T  35945542 tggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactattttggtcc 35945445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 39546775 - 39546670
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | |||||| |||| | || ||||| |||||||| | |||||||||| |||||| || || |||||||| |||||||| | || ||||    
T  39546775 ttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgtta 39546676  T
Q  497 gttttt 502  Q
    ||||||    
T  39546675 gttttt 39546670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 37474119 - 37474043
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||| |||| ||||||||||||||||||| | |||||||||||  |||||||||  |||||| ||| ||||||||    
T  37474119 ttttcaatttggtcccttaactataaagtgtctcaatttggtcctggaaatcttcttccgtttatcatcttggtcct 37474043  T

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Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 34617299 - 34617188
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||| |||| ||||  ||||||||||| |||||||| |||||| | ||||| |||| |||  ||||||  |||||| |||||||||| |||    
T  34617299 ggtcccttaacttttttttttttcccagtttgatccattaactattaagtgtgtcaatttagtcccatagctcttcttccgtttatcattttggtcattt 34617200  T
Q  491 ctgttagttttt 502  Q
    | || |||||||    
T  34617199 ccgtcagttttt 34617188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 35943902 - 35944031
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactat-aaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||||||| ||| ||| ||| | |||||||||| ||||||||| ||     
T  35943902 ggcttaatacatcgtt---tggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgc 35943998  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
     |||||| ||||||||| | || ||||||||||    
T  35943999 agtttactattttggtcatctccgttagttttt 35944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 486
Target Start/End: Complemental strand, 45195907 - 45195813
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||| ||||||||||||| ||| |||||||| |||||||| |||||||||| | ||||| ||||  || |||||||| ||||  | |||||||||    
T  45195907 gtcccttaacttattttaatttctcagtttggtcccttaaatataaagtgtctcaatttagtccattatatcttctgccgttatctattttggtc 45195813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 16363917 - 16363808
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||  |||||||||||| | | |||||| ||| ||||||| ||||  |||||| |||||||||||     
T  16363917 tggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttactattttggtcctc 16363818  T
Q  490 tctgttagtt 499  Q
    || |||||||    
T  16363817 tccgttagtt 16363808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 22914294 - 22914229
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||| ||  |||| |||||| ||||    
T  22914294 ggtcccttaacttattttaatttttcagtttgatccattaactattaaacgtttcaatttgatcct 22914229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 491
Target Start/End: Original strand, 39515210 - 39515311
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| ||||||||| | |||||||||||| | |||||||||  |||| |||| || | |||||| |||||||| ||    
T  39515210 tggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatttacctttttggtcatt 39515309  T
Q  490 tc 491  Q
    ||    
T  39515310 tc 39515311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 43278019 - 43277930
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||| | |||| | |||| |||| |||||||||| ||| | ||||||||||  |||||||| || ||||||| |||||||||    
T  43278019 ttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtc 43277930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 467
Target Start/End: Complemental strand, 43386807 - 43386730
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttct 467  Q
    |||||| ||||||||||||   ||||||||||| |||| |||||||||| ||| | |||||||||| |||| ||||||    
T  43386807 tggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 43386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 1570311 - 1570215
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||||||||||   |||||| |||| || | |||||||||||||| | |||||||||   ||||| || || ||||||| |||||||||    
T  1570311 tggtcctttaacttatttttcattttcaatttggtctcataactataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtc 1570215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 502
Target Start/End: Original strand, 8395058 - 8395118
Alignment:
Q  442 ttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    ||||| |||||||| |||| ||||||  ||||||||||||||||||| || ||||||||||    
T  8395058 ttttattttggtcccataattcttcttccgtttaccattttggtcctctccgttagttttt 8395118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 456
Target Start/End: Original strand, 16346112 - 16346176
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    |||| ||||||||||||| ||| |||||||| |||||||||||| ||  |||| |||||||||||    
T  16346112 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 16346176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 455
Target Start/End: Complemental strand, 31872908 - 31872844
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||| ||| ||| | || |||||||    
T  31872908 ggtcctttaacttattttaatttctcagtttgatccctcaactaaaaaatgtctcaaattggtcc 31872844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 488
Target Start/End: Original strand, 43275744 - 43275859
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||  |||||||||||| | |||||| |||| | || |||||||||||||| | ||||| |||| |||| |||| ||     
T  43275744 aggcttaatacatcatt---tggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgc 43275840  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||  |||||||||||    
T  43275841 cgtttattattttggtcct 43275859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 456
Target Start/End: Complemental strand, 9190540 - 9190481
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||| ||| |||||||  |||||||||||| || ||||| |||||||||||    
T  9190540 ttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtcct 9190481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 467
Target Start/End: Original strand, 44606172 - 44606227
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttct 467  Q
    |||||| |||| |||| |||||||| ||||||| |||||||||| |||||||||||    
T  44606172 ttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttct 44606227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 4807378 - 4807452
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatctt 465  Q
    ||||||||||||||||||   |||| | |||| |||| ||||||||| || ||| |||||||||| |||||||||    
T  4807378 ggtcctttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatctt 4807452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 14195677 - 14195727
Alignment:
Q  72 tcatttcatgtgagggtgtgtgtaacaaagttgatttgtgattgtgtccat 122  Q
    ||||||||||| ||| ||||| ||| ||| |||||||||||||||||||||    
T  14195677 tcatttcatgtaaggatgtgtctaataaaattgatttgtgattgtgtccat 14195727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 45338557 - 45338511
Alignment:
Q  72 tcatttcatgtgagggtgtgtgtaacaaagttgatttgtgattgtgt 118  Q
    ||||||||||||||||||||  ||||||| ||||| |||||||||||    
T  45338557 tcatttcatgtgagggtgtgcctaacaaaattgatatgtgattgtgt 45338511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 7770995 - 7770938
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||||||||| | |||||| |||||||   |||||||||||||||| |||||||||    
T  7770995 ttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtc 7770938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 456
Target Start/End: Complemental strand, 12820194 - 12820137
Alignment:
Q  399 aacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||| ||| |||||| | |||||||||||| ||  ||||||||||||||||    
T  12820194 aacttattttaatttctcagttcggtcccttaactattaaacgttttaatttggtcct 12820137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 475
Target Start/End: Original strand, 14820204 - 14820289
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgttta 475  Q
    |||||| ||||||||||||    ||| | |||| |||| |||||||||||||| | ||||| |||| ||||||||| |||||||||    
T  14820204 tggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgttta 14820289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 39220697 - 39220802
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||| ||| ||| |||| ||  |||||||| |||||||| |||||| | |  ||| ||||||| ||||||| ||||| ||  | |||||||    
T  39220697 ttaacttattttaatttctcattttggtctattaactattaagtgtttcaatttgattccttaagtcttctgccgtttactattttcgttatctctgtta 39220796  T
Q  497 gttttt 502  Q
    ||||||    
T  39220797 gttttt 39220802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 462
Target Start/End: Complemental strand, 41868037 - 41867949
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaat 462  Q
    ||||||||||||| ||   |||||| |||| |||||||   |||||| |||| |||| |||||||||||||| | |||||||||| ||||||    
T  41868037 ggcttaatacatcatt---tggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaat 41867949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 456
Target Start/End: Original strand, 4534047 - 4534111
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    |||| ||||||||||||| ||| |||||||| ||| |||| ||| || ||||| |||||||||||    
T  4534047 gtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtcct 4534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 435
Target Start/End: Original strand, 12818766 - 12818810
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactat 435  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||    
T  12818766 ggtcccttaacttattttaatttctcagtttggtcccttaactat 12818810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 502
Target Start/End: Original strand, 36938744 - 36938804
Alignment:
Q  442 ttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    ||||| |||||||  |||||||||||| ||||||| ||||||||| | ||||||| |||||    
T  36938744 ttttactttggtctcataaatcttctgccgtttactattttggtcttctctgttaattttt 36938804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 15857722 - 15857611
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||||||| | |    
T  15857722 ggtcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatct 15857623  T
Q  491 ctgttagttttt 502  Q
    | ||||||||||    
T  15857622 ccgttagttttt 15857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 502
Target Start/End: Original strand, 32734144 - 32734254
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||| |||| ||||||||||||||| ||||||||| |||    
T  32734144 ggtcctttaacttattttattttttcagtttggtcccttaactat-tagtgtcttaatttggtcccataactcttctgtcgtttactattttggtcattt 32734242  T
Q  491 ctgttagttttt 502  Q
    | ||||||||||    
T  32734243 ccgttagttttt 32734254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 42510108 - 42510237
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||    ||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||     
T  42510108 aggcttaatacatccc---ctgatcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgc 42510204  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| |||||||| || || ||||||||||    
T  42510205 cgtttactattttggttctctccgttagttttt 42510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 371 - 502
Target Start/End: Complemental strand, 12831059 - 12830931
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    |||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||||| |||||||      
T  12831059 ggcttaatacatc--tctc-ggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgct 12830963  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    |||||| ||||||||||| || |||| |||||    
T  12830962 gtttactattttggtcctctccgttaattttt 12830931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 12863016 - 12862911
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||||| |||||||  |||||| ||||||||||| || ||||    
T  12863016 ttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgtta 12862917  T
Q  497 gttttt 502  Q
     |||||    
T  12862916 attttt 12862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 371 - 486
Target Start/End: Original strand, 18677971 - 18678083
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| ||||||||| |||||||||||||| | |||||||||| ||||||||||||||    
T  18677971 ggcttaatacatcatt---tggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtc 18678067  T
Q  471 gtttaccattttggtc 486  Q
    ||||||| ||||||||    
T  18678068 gtttaccgttttggtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 392 - 486
Target Start/End: Original strand, 1663200 - 1663294
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||| ||||||||||||    ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  1663200 gtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtttactattttggtc 1663294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 397 - 487
Target Start/End: Complemental strand, 22819647 - 22819557
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcc 487  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||| | |||||||||| |||| ||||||| ||||||| ||||||||||    
T  22819647 ttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgtttactattttggtcc 22819557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 8188305 - 8188229
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||| | ||||||||||||||| |||||    
T  8188305 tggtcccttaacttattttattttttcagtttgatcctttaactattaagtgtgtcaatttggtcctataagtcttc 8188229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 19523994 - 19524089
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||   |||||| |||| ||||||||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||    
T  19523994 tggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggt-ctataaattttctgtcgtttaccattttggtc 19524089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 498
Target Start/End: Complemental strand, 32735577 - 32735476
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||| ||||||||||| ||| ||||||||||||| ||| || |||||||||||||||| |||| ||||||| ||||||  ||||||||| | |||||||    
T  32735577 ttaacatattttattttctcaatttgatcccttaattattaaatgttttaatttggtcccataactcttctgccgtttattattttggtcatctctgtta 32735478  T
Q  497 gt 498  Q
    ||    
T  32735477 gt 32735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 40058036 - 40058141
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| ||||||||||||||||| |||||||| || ||||||  |||| ||||||| ||||||||||||||||| | || ||||    
T  40058036 ttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtta 40058135  T
Q  497 gttttt 502  Q
    ||||||    
T  40058136 gttttt 40058141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 500
Target Start/End: Original strand, 326357 - 326465
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||||||||||||||||   |||||| |||||||||| ||||||||||||| | ||||||||   ||||||||||||| ||||| |||||||||||  ||    
T  326357 gtcctttaacttatttttggttttcaatttgatccctcaactataaagtgtctcaatttggttgcataaatcttctgttgtttatcattttggtccggtc 326456  T
Q  492 tgttagttt 500  Q
    |||| ||||    
T  326457 tgtttgttt 326465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 484
Target Start/End: Complemental strand, 42511769 - 42511677
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttgg 484  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||| | |||||| | | |||||||||||| ||||| | |||||||    
T  42511769 gtcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttgg 42511677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 390 - 485
Target Start/End: Complemental strand, 40059433 - 40059338
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggt 485  Q
    |||||| ||||||||||||   |||||| ||||||||| ||||||| ||||||||||| ||||||| |||| ||||||| |||||| |||||||||    
T  40059433 tggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgtttatcattttggt 40059338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 502
Target Start/End: Complemental strand, 5384429 - 5384339
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| ||||||||| |||||||||||||| | |||||||||| ||||||||||   ||||||| ||||||||||| || ||||||||||    
T  5384429 ttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccgtttactattttggtcctctccgttagttttt 5384339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 19525410 - 19525281
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| |  ||||||||  |||| |||||||     
T  19525410 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgc 19525314  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||||||||| || ||| ||||||    
T  19525313 cgtttaccattttggtcctctccgtttgttttt 19525281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 429 - 502
Target Start/End: Complemental strand, 38473621 - 38473548
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||| |||| |||| |||||    
T  38473621 taactgtaaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaattttt 38473548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 496
Target Start/End: Original strand, 26403320 - 26403424
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||||||||||||||||   |||||| |||| ||||||||||||||||||| | |||||| ||  |||||| || |||||||||| ||||||||| | ||    
T  26403320 gtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtcttctc 26403419  T
Q  492 tgtta 496  Q
    |||||    
T  26403420 tgtta 26403424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 485
Target Start/End: Complemental strand, 27894121 - 27894033
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggt 485  Q
    |||||||||||| | |||||| |||| |||| |||||||||||||||| |||||||||  |||||| ||| ||||||||| ||||||||    
T  27894121 ttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgtttactattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 491
Target Start/End: Original strand, 12933764 - 12933863
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||   |||||| ||||||||| |||||||||||||| | |||||| ||  |||| ||||||| |||||||||||| |||||||||    
T  12933764 gtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttaccatttcggtcctttc 12933863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 491
Target Start/End: Original strand, 12947925 - 12948024
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||   |||||| ||||||||| |||||||||||||| | |||||| ||  |||| |||| ||||||||||||||| |||||||||    
T  12947925 gtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgtttaccatttcggtcctttc 12948024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 13944624 - 13944561
Alignment:
Q  157 ttatttgtttttatgccacatcatcacttttgggataaattgtgtccaaaatttactttttgtg 220  Q
    ||||||| |||| |||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  13944624 ttatttgcttttttgccgcatcatcagttttggggtaaattgtgtccaaaatttactttttgtg 13944561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 502
Target Start/End: Complemental strand, 12936205 - 12936095
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||| |||| ||  |||||||||||||||| ||||    
T  12936205 gtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttggtcatttc 12936106  T
Q  492 tgttagttttt 502  Q
     ||| ||||||    
T  12936105 cgtttgttttt 12936095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 19827238 - 19827149
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||   |||||| |||| |||| ||| |||||||||| | |||||||||| |||||||||||  |||||||||||||||||    
T  19827238 ttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtc 19827149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 502
Target Start/End: Original strand, 38471303 - 38471412
Alignment:
Q  393 tcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttct 492  Q
    ||||||||||||||||    ||||| |||| |||||||||| |||| ||||| |||||||| | |||||||||||  ||||||| |||||||| || |||    
T  38471303 tcctttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctct 38471402  T
Q  493 gttagttttt 502  Q
    |||| |||||    
T  38471403 gttaattttt 38471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 1273100 - 1273212
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| |||| |||||||   |||||| |||| ||| ||||||||||| ||| | |||||||||| ||||||||||||  |||||| ||||||||||      
T  1273100 tggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagtttacaattttggtcccc 1273199  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  1273200 tccgttagttttt 1273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 10085950 - 10085842
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| |||| || ||||||| |||||||||| |||||||||| ||||||||||||   ||||| |||||||||||     
T  10085950 tggtcccttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataaatcttctgctatttactattttggtcctc 10085851  T
Q  490 tctgttagt 498  Q
    || ||||||    
T  10085850 tccgttagt 10085842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 500
Target Start/End: Complemental strand, 15510393 - 15510258
Alignment:
Q  362 attttaagaggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaa 461  Q
    ||||||| ||||||||||||| |||   |||||| ||||||||||||    ||||| ||||||||| |||||||||||||| | ||||||||||  ||      
T  15510393 attttaaaaggcttaatacatgctt---tggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatg 15510297  T
Q  462 tcttctgtcgtttaccattttggtcctttctgttagttt 500  Q
    ||||||| ||||  |  |||||||||| |||||||||||    
T  15510296 tcttctgccgttacctcttttggtcctctctgttagttt 15510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 18693709 - 18693821
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||| | |||| ||||||||||||||| ||| | ||| |||||| |||||||||||||||||  |  ||||||||||     
T  18693709 tggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctc 18693808  T
Q  490 tctgttagttttt 502  Q
    |||||||||||||    
T  18693809 tctgttagttttt 18693821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 21387648 - 21387760
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| |||| |||| |||||||||| ||| | |||||||||| |||||||||||| ||||  |  ||||||||||     
T  21387648 tggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctg 21387747  T
Q  490 tctgttagttttt 502  Q
    |||||||||||||    
T  21387748 tctgttagttttt 21387760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 22812492 - 22812380
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| |||||||||||| | |||||| |||  ||||||||||||||| ||| | | |||| ||| ||||||||||||  |||||| ||||||||||      
T  22812492 tggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttggtcccc 22812393  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  22812392 tccgttagttttt 22812380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 500
Target Start/End: Complemental strand, 15615026 - 15614955
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttt 500  Q
    |||||||||||||| | |||||||| | |||||| ||||| ||||||| ||||||||||| |||||||||||    
T  15615026 taactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtcctctctgttagttt 15614955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 39135752 - 39135689
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||| || ||||| |||||||||    
T  39135752 ggtcctttaacttattttaatttctcagtttgctcccttaactattaaatgtttcaatttggtc 39135689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 488
Target Start/End: Original strand, 42979498 - 42979557
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||||||||||||| |||||||||| |||| ||||||| ||||||| |||||||||||    
T  42979498 taactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcct 42979557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 388 - 454
Target Start/End: Complemental strand, 224697 - 224631
Alignment:
Q  388 tctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||||| |||||||||||||| |||||| |||| |||| |||||||||||||| | |||||||||    
T  224697 tctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtc 224631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 12829564 - 12829625
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaacta 434  Q
    ||||||||||||||||   || |||| |||||||||||||||||||||||||| |||||||||||    
T  12829564 aggcttaatacatcct---ctcgtcccttaacttattttattttttcagtttggtcccttaacta 12829625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 502
Target Start/End: Complemental strand, 12950343 - 12950253
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||| |||| |||||||||||||| | |||||||||| |||| |||| ||  |||||||||||||||| |||| ||| ||||||    
T  12950343 ttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtttaccattttggtcatttccgtttgttttt 12950253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 11907265 - 11907200
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| |||||||| |||||||||||| || ||||| |||||||||||    
T  11907265 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11907200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 502
Target Start/End: Original strand, 15613555 - 15613628
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||| | |||||||||| |||||||||||  ||||||| ||||||||||| || |||| |||||    
T  15613555 taactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaattttt 15613628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 502
Target Start/End: Complemental strand, 42980775 - 42980702
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||| | |||||||||  ||| |||||||| | |||||||||||||||||||| |||| |||||    
T  42980775 taactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcctttccgttaattttt 42980702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 502
Target Start/End: Original strand, 223238 - 223349
Alignment:
Q  392 gtcctttaacttatttt-attttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    |||| |||||||||||| | |||| || |||| |||| |||||||||||||| |||||||||||| |||| |||||   ||||||| | | |||||||||    
T  223238 gtcccttaacttatttttagttttccactttggtcccctaactataaagtgtattaatttggtcccataagtcttcctccgtttactaatgtggtccttt 223337  T
Q  491 ctgttagttttt 502  Q
    |  |||||||||    
T  223338 ccattagttttt 223349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 12861543 - 12861604
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaacta 434  Q
    ||||||||||||||||   || |||| ||||||||||||||||| |||||||| |||||||||||    
T  12861543 aggcttaatacatcct---ctcgtcccttaacttattttattttctcagtttggtcccttaacta 12861604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 437 - 502
Target Start/End: Complemental strand, 2167572 - 2167508
Alignment:
Q  437 aagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||| |||||||||| |||||||||||| ||||||  |||||||| || |||||||||||||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggt-ctctctgttagttttt 2167508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 419 - 488
Target Start/End: Complemental strand, 26404286 - 26404217
Alignment:
Q  419 tttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| ||| ||||||||||||||| | |||||| ||| ||||||||| |||| ||||| |||||||||||    
T  26404286 tttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatttactattttggtcct 26404217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 26912436 - 26912331
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | |||||| |||| |  | ||| |||||||||  ||||||| ||||||||| |||||| |||||||| ||| ||||||  |||||||    
T  26912436 ttaacttattttttgttttcattttggtttcctaattataaagtgacttaatttagtcctataattcttctatcgtttacaattgtggtcccctctgtta 26912337  T
Q  497 gttttt 502  Q
     |||||    
T  26912336 tttttt 26912331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 5975767 - 5975879
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    ||||||||||||||||||| | |||| | |||| |||| ||| |||||||||| | |||||||||  |||| |||||    |||||| ||| |||| ||     
T  5975767 tggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctgtttactattgtggttctc 5975866  T
Q  490 tctgttagttttt 502  Q
    |||||||||||||    
T  5975867 tctgttagttttt 5975879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 456
Target Start/End: Complemental strand, 8284347 - 8284283
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    |||| ||||||||||||| ||| |||||||  || ||||||||| || |||||||||||||||||    
T  8284347 gtcccttaacttattttaatttctcagtttagtctcttaactattaaatgttttaatttggtcct 8284283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 24761824 - 24761728
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| ||||||||||||||||| | |||||  |||||||| ||| |||||| | |||||| ||  |||| || |||| |||||||||||||| ||||    
T  24761824 gtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcct 24761728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 500
Target Start/End: Original strand, 4566985 - 4567072
Alignment:
Q  413 tttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttt 500  Q
    ||||| ||||||||| |||||||||||||| | ||||||||||  ||  ||||||||||||  |  |||||||| | |||||||||||    
T  4566985 tttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcatctctgttagttt 4567072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 29906127 - 29906174
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataa 437  Q
    |||||| |||||||||||| || ||||| |||||||||||||||||||    
T  29906127 tggtcccttaacttatttttttgtttcattttgatcccttaactataa 29906174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 8762505 - 8762407
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||| ||||||||||||   |||||| |||| |||| | |||||||| ||| | |||||||||  |||||| || |||||||||| ||||| |||||    
T  8762505 tggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgtttactattttagtcct 8762407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 426
Target Start/End: Complemental strand, 7428022 - 7427993
Alignment:
Q  397 ttaacttattttattttttcagtttgatcc 426  Q
    ||||||||||||||||||||||||||||||    
T  7428022 ttaacttattttattttttcagtttgatcc 7427993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 24070417 - 24070482
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| |||| |||||||| ||| ||||| ||||||||||||||| ||  |||| |||||||||||    
T  24070417 ggtcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtcct 24070482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 18695752 - 18695676
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||| |||| |||||||   |||||| |||  ||||||||||||||||||| | |||||||||| |||| |||||    
T  18695752 tggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttc 18695676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 502
Target Start/End: Complemental strand, 21389268 - 21389136
Alignment:
Q  365 ttaagaggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatct 464  Q
    |||| ||||||||||||| |||   |||||| ||||||||||||   |||||| |||  ||||||||||||  ||||| | |||||||||| |||| |||    
T  21389268 ttaaaaggcttaatacatgctt---tggtcccttaacttatttttggttttcatttttttcccttaactat--agtgtctcaatttggtcccataagtct 21389174  T
Q  465 tctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    ||   ||||||| | | ||||||| || ||||||||||    
T  21389173 tcctccgtttactaatatggtcctctccgttagttttt 21389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 340
Target Start/End: Original strand, 28398236 - 28398268
Alignment:
Q  308 aatatgggaccaatatttgtgagtgataaatat 340  Q
    ||||| |||||||||||||||||||||||||||    
T  28398236 aatataggaccaatatttgtgagtgataaatat 28398268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 30253605 - 30253661
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||| ||||||||||||||| || ||||| |||||| |||||| | |||||||||    
T  30253605 taacttgttttattttttcagtgtggtccctcaactattaagtgtgtcaatttggtc 30253661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 6e-32; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 14509203 - 14509332
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||| |   | ||| ||||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  14509203 aggcttaatacatcctcc---gatcccttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgt 14509299  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||||||||||| || |||| |||||    
T  14509300 cgtttactattttggtcctctccgttaattttt 14509332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 385 - 498
Target Start/End: Complemental strand, 3533736 - 3533623
Alignment:
Q  385 ttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttgg 484  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||||| | |||||||||  ||||||||| |||||||||| |||| |     
T  3533736 ttctccggtcctttaacttattttatttttttagtttggtcccttaactattaagtgtgtcaatttggtctcataaatcttttgtcgtttactatttcga 3533637  T
Q  485 tcctttctgttagt 498  Q
    || |||| ||||||    
T  3533636 tcatttccgttagt 3533623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 370 - 491
Target Start/End: Original strand, 7036960 - 7037078
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||||||||||||||||    ||||| |||  ||||||||||||||||||||| |||||||||| |||| |||||||     
T  7036960 aggcttaatacatcatt---tggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgc 7037056  T
Q  470 cgtttaccattttggtcctttc 491  Q
    ||||||||||||||||| ||||    
T  7037057 cgtttaccattttggtcatttc 7037078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 14510613 - 14510522
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccatttt 482  Q
    ||||||||||||||||||||||| | |||||  |||||||||||| |||||| | ||||||||||||||| ||||||| ||||||| |||||    
T  14510613 ggtcctttaacttattttattttcttagtttagtcccttaactattaagtgtctcaatttggtcctataactcttctgccgtttactatttt 14510522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 401 - 504
Target Start/End: Complemental strand, 21012174 - 21012071
Alignment:
Q  401 cttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttt 500  Q
    |||||||| | |||||| ||||||||| |||||||||||||||| ||||||||||   |||||||| ||||||||| ||||||||| | || ||||||||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttagttt 21012075  T
Q  501 ttga 504  Q
    ||||    
T  21012074 ttga 21012071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 23177668 - 23177797
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatccct-taactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| ||   |||||| |||| |||||||   |||||| |||| ||||  |||||||||||||| | |||||||||| ||||||||||||     
T  23177668 ggcttaatacatcatt---tggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgc 23177764  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||||||||| || ||||||||||    
T  23177765 cgtttaccattttggtcctctccgttagttttt 23177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 23588925 - 23589054
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatccct-taactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| ||   |||||| |||| |||||||   |||||| |||| ||||  |||||||||||||| | |||||||||| ||||||||||||     
T  23588925 ggcttaatacatcatt---tggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgc 23589021  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||||||||| || ||||||||||    
T  23589022 cgtttaccattttggtcctctccgttagttttt 23589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 454
Target Start/End: Original strand, 7982326 - 7982387
Alignment:
Q  393 tcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  7982326 tcctttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtc 7982387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 37867751 - 37867879
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| ||||||||| |||||||||||||| | |||||||||| | |||| |||| ||    
T  37867751 ggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttctttc 37867847  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    ||||| |||||||||| | |||||| ||||||    
T  37867848 gtttatcattttggtcatgtctgtttgttttt 37867879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 23178987 - 23178875
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||| |||||||||| |||||||| ||||||| |||||||||| ||||||||  ||||||||| |     
T  23178987 tggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatc 23178888  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  23178887 tccgttagttttt 23178875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 23590244 - 23590132
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||| |||||||||| |||||||| ||||||| |||||||||| ||||||||  ||||||||| |     
T  23590244 tggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttggtcatc 23590145  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  23590144 tccgttagttttt 23590132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 35801150 - 35801038
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||| |||| | |||||| ||| |||||||||||||||||||||| ||||||||||  ||| ||||||| | ||||||| |||||||||     
T  35801150 tggtcccttaacttgttttctattttcattttcatcccttaactataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctc 35801051  T
Q  490 tctgttagttttt 502  Q
    || |||| |||||    
T  35801050 tccgttaattttt 35801038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 25570992 - 25570863
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||||||||   ||||| ||||||||||||||||| ||||| |  |||||||||||| |||||||| |||||| | | |||| |||||       
T  25570992 aggcttaatacatccttc---ggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtttcaatttgattccataagtcttcctc 25570896  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    | ||||| ||||| |||||||| ||||||||||    
T  25570895 catttactattttagtcctttccgttagttttt 25570863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 7490293 - 7490188
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| |||||||| ||| |||| |||||| ||| | |||||||||| ||||||||| | | |||||| ||||||||| | || ||||    
T  7490293 ttaacttattttattttctcagtttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgtta 7490194  T
Q  497 gttttt 502  Q
    ||||||    
T  7490193 gttttt 7490188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 490
Target Start/End: Complemental strand, 7983793 - 7983700
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||||||||||||||| ||||||| || |||||||||| |||||| | ||||||||||||||| ||||||  |||||||  |||| |||||||    
T  7983793 ttaacttattttattttctcagtttaattccttaactattaagtgtgtcaatttggtcctataagtcttctaccgtttactgttttagtccttt 7983700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 498
Target Start/End: Original strand, 2581814 - 2581922
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    ||||||| |||||||||||   |||||| ||||||||| |||||||||||||| | |||||||||| |||||||||  | ||||||| || ||||||||     
T  2581814 tggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgtttactatcttggtcctc 2581913  T
Q  490 tctgttagt 498  Q
    || ||||||    
T  2581914 tccgttagt 2581922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 502
Target Start/End: Original strand, 11386639 - 11386747
Alignment:
Q  394 cctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctg 493  Q
    |||||||||||||||   |||| | |||| ||||||||||||||||||||| |||||| ||| ||||| |||||  ||||||||||||||||  | ||||    
T  11386639 cctttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggttttatctg 11386738  T
Q  494 ttagttttt 502  Q
    || ||||||    
T  11386739 tttgttttt 11386747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 15850124 - 15850188
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    ||||| |||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||    
T  15850124 ggtcccttaacttattttattttttcagtttggtctcttaactataaagtgtctcaatttggtcc 15850188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 32614396 - 32614508
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||| ||||||||||||||||| |||| |||| ||||||| | |||||| ||||| || | |||| |||| |||||||||||||||| |||||     
T  32614396 tggtcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtttaccattttagtcctc 32614495  T
Q  490 tctgttagttttt 502  Q
    || ||| ||||||    
T  32614496 tccgtttgttttt 32614508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 37869145 - 37869049
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||   |||||| |||| ||||||||||||||||||| | ||||| |||  |||| |||||||||||||||| ||||||||    
T  37869145 tggtcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtc 37869049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 495
Target Start/End: Original strand, 3532212 - 3532310
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtt 495  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||| | |||||||||  |||| |||| |||| ||||| ||||| ||| | ||||||    
T  3532212 ttaatttattttattttttcagtttgatcccttaattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatctctgtt 3532310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 6706920 - 6707049
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | |||||||| | |||||||||||      
T  6706920 aggcttaatacatgctt---tggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttc 6707016  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||||||||||  || ||||||||||    
T  6707017 cgtttactattttggtcccctccgttagttttt 6707049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 42246585 - 42246714
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||| ||||   |||||| ||||||||| ||| |||||||||||| |||||| ||| |||| |||| |      
T  42246585 aggcttaatacatgctt---tggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttac 42246681  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| |||||||||||||  ||||||||||    
T  42246682 cgtttactattttggtccttttcgttagttttt 42246714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 498
Target Start/End: Original strand, 4829483 - 4829584
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| |||  ||||||||||||||| ||| | |||||| ||  ||||||||| |||||||||| ||||||||||| |||||||    
T  4829483 ttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtcctctctgtta 4829582  T
Q  497 gt 498  Q
    ||    
T  4829583 gt 4829584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 486
Target Start/End: Original strand, 12852920 - 12852993
Alignment:
Q  413 tttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||| |||| |||| |||||||||||||| | |||||||||| ||||||||||| |||||||| |||||||||    
T  12852920 tttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtc 12852993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 468
Target Start/End: Complemental strand, 12854225 - 12854131
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctg 468  Q
    |||||||||||| |||   |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| | |||||||||| ||||||||||||    
T  12854225 ggcttaatacatgctt---tggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttctg 12854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 12958434 - 12958539
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||| | ||||||||| |||||||||||||| | |||||||||| |||||| ||||  | |||| |||||||||| |||| |||     
T  12958434 ttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccatttatcattttggtcatttccgttt 12958533  T
Q  497 gttttt 502  Q
    ||||||    
T  12958534 gttttt 12958539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 15850763 - 15850686
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctg 468  Q
    ||||| ||||||||||||||||| | |||||| ||| ||||||||||| ||||| |||||||||  |||| |||||||    
T  15850763 ggtcccttaacttattttattttcttagtttgctcctttaactataaaatgtttcaatttggtctcataactcttctg 15850686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 10368490 - 10368394
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| |||| |||||||   |||||| ||||||||| |||||||||||||| | |||||| ||| |||||| ||||  |||||| ||||||||||    
T  10368490 tggtcccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgtttatcattttggtc 10368394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 435
Target Start/End: Original strand, 25569781 - 25569825
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactat 435  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  25569781 ggtcctttaacttattttatttttttagtttggtcccttaactat 25569825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 28109974 - 28109862
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| || | |||| ||||||| | | |||||||||| |||| | |||||| ||||||||||||||||||     
T  28109974 tggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgtagtttaccattttggtcctc 28109875  T
Q  490 tctgttagttttt 502  Q
    || |||| |||||    
T  28109874 tccgttatttttt 28109862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 502
Target Start/End: Complemental strand, 40174821 - 40174757
Alignment:
Q  438 agtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| |||||||||| ||||||||||||| |||||| ||||||||| | || ||||||||||    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttt 40174757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 488
Target Start/End: Complemental strand, 12959803 - 12959712
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||||||||   |||| | |||| ||||||||| ||||||||| | ||||| |||| |||||||||||| |||||||| ||||| ||||    
T  12959803 ttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcct 12959712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 498
Target Start/End: Original strand, 42027187 - 42027312
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||  |||||| ||| ||| | |||||||||| |||||| |||||     
T  42027187 aggcttaatacatcgtt---tggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgc 42027283  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
     |||||| | |||||||||||| ||||||    
T  42027284 tgtttactactttggtcctttccgttagt 42027312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 1625042 - 1624985
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||||| | |||||||||||||||||||| || | ||||| |||||||||    
T  1625042 taactataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtc 1624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 6209130 - 6209074
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||    
T  6209130 taactataaagtgtcttaatttggtcccataattctt-tgtcgtttactattttggtc 6209074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 499
Target Start/End: Complemental strand, 29424717 - 29424608
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||| |  ||| |||| |||||||||||||||| ||||||||||  | ||| ||||| ||||||   ||||||||||     
T  29424717 tggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtcctc 29424618  T
Q  490 tctgttagtt 499  Q
    ||||||||||    
T  29424617 tctgttagtt 29424608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 460
Target Start/End: Complemental strand, 7038454 - 7038367
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataa 460  Q
    |||||||||||||| ||   |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| | |||||||||| ||||    
T  7038454 aggcttaatacatcatt---tggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 473
Target Start/End: Complemental strand, 3528370 - 3528287
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtt 473  Q
    ||||||||||| |||||||   |||| | |||| || || |||||||||||||||||| ||||||  ||||||||| |||||||    
T  3528370 tggtcctttaatttatttttgatttttaatttggtcgctcaactataaagtgttttaagttggtctcataaatcttttgtcgtt 3528287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 456
Target Start/End: Complemental strand, 33553463 - 33553404
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||| |||||||||||| || ||||||||| ||  |||| |||||||||||    
T  33553463 ttaacttattttaatttttcagtttggtctcttaactattaaacgtttcaatttggtcct 33553404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 41796055 - 41795992
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    |||| ||||||||||||   |||||| ||||||||| |||||||||||||| | ||||||||||    
T  41796055 gtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcc 41795992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 456
Target Start/End: Complemental strand, 20630767 - 20630710
Alignment:
Q  399 aacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||| ||| ||||||| ||||||||||||| ||  |||| |||||||||||    
T  20630767 aacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtcct 20630710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 39272308 - 39272251
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||| | |||||||||||| ||| |||||||| ||  ||||||||||||||    
T  39272308 ttaacttatttaaatttttcagtttggtcctttaactattaaacgttttaatttggtc 39272251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 42029024 - 42028967
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||||| |  ||||||||| |||| |||||||||| |||| |||||||||    
T  42029024 taactataaagtgtctcgatttggtcccataattcttctgtcgcttactattttggtc 42028967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 42249909 - 42249846
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataa 437  Q
    |||||||||||| |||   ||||||||||||||||||| | |||||| ||||||||| ||| |||||    
T  42249909 ggcttaatacatgctt---tggtcctttaacttattttttgttttcattttgatcccctaattataa 42249846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 391 - 498
Target Start/End: Complemental strand, 42450 - 42343
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| | |||| | |||||| ||| |||||||||||||||||||| ||||||||||| |    
T  42450 ggtcccttaacttattttattttctcagtttgatcccttaactattacgtgtatcaatttgatcccataaatcttctgtcgtttactattttggtcctct 42351  T
Q  491 ctgttagt 498  Q
    ||||||||    
T  42350 ctgttagt 42343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 40926 - 41031
Alignment:
Q  389 ctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||||| |||        |||||||  |||| |||||||||||||||  |||| || ||    
T  40926 ctggtcccttaaccttttttattttttcagtttgatcccttaactattaag--------tttggtctcataagtcttctgtcgtttactgttttagttct 41017  T
Q  489 ttctgttagttttt 502  Q
     |||||||||||||    
T  41018 ctctgttagttttt 41031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 6e-29; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 36509829 - 36509934
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| | |||||||||||| ||||||| |||||||| || || ||||    
T  36509829 ttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgtta 36509928  T
Q  497 gttttt 502  Q
    ||||||    
T  36509929 gttttt 36509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 392 - 501
Target Start/End: Complemental strand, 36511434 - 36511325
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| |||| |||||||||||| |||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||||||| | ||    
T  36511434 gtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctc 36511335  T
Q  492 tgttagtttt 501  Q
     |||||||||    
T  36511334 cgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 392 - 502
Target Start/End: Original strand, 14169632 - 14169742
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| |||||||| ||| ||||||||||| ||| | |||||||||| ||||||||| |||||||||| ||||||||| | ||    
T  14169632 gtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatc 14169731  T
Q  492 tgttagttttt 502  Q
    |||||||||||    
T  14169732 tgttagttttt 14169742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 389 - 502
Target Start/End: Original strand, 14764239 - 14764352
Alignment:
Q  389 ctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| ||| |||||| |||||||||||  |||| |||||||||||||||  |||| ||| |    
T  14764239 ctggtcccttaacttattttatttttttagtttgatcccttaattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcat 14764338  T
Q  489 ttctgttagttttt 502  Q
     |||||||||||||    
T  14764339 ctctgttagttttt 14764352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 400 - 502
Target Start/End: Complemental strand, 19466300 - 19466198
Alignment:
Q  400 acttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagtt 499  Q
    |||||||||||||| |||||||| ||| ||||||||||||||| | |||||||||| |||||||||||||||||||| ||| |||| || || |||||||    
T  19466300 acttattttattttctcagtttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagtt 19466201  T
Q  500 ttt 502  Q
    |||    
T  19466200 ttt 19466198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 40109379 - 40109484
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||| | |||||||||| ||||||||||   ||||||| | | |||||||||||||||    
T  40109379 ttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatcttcatccgtttactaatgtggtcctttctgtta 40109478  T
Q  497 gttttt 502  Q
    ||||||    
T  40109479 gttttt 40109484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 19464619 - 19464707
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| |||||||| | | |||||||||| ||||||| |||||||||    
T  19464619 taacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtc 19464707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 51726948 - 51726837
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| |||||||| ||  ||||||||||||||| | |||||||| | |||||||||||||||||||| ||||| |||||      
T  51726948 ggtcccttaacttattttattttctcagtttggtcatttaactataaagtgtctcaatttggttccataaatcttctgtcgtttactattttagtcctca 51726849  T
Q  491 ctgttagttttt 502  Q
    | ||||||||||    
T  51726848 ccgttagttttt 51726837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 14071325 - 14071196
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| |||| |||||||   |||||| |||| |||  |||||||||||||| | |||||||||| |||| ||||||||    
T  14071325 aggcttaatacatcatt---tggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgt 14071229  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||||||||||| ||| ||||||    
T  14071228 cgtttaccattttggtcctttccgtttgttttt 14071196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 14765216 - 14765091
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||   |||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||| | |||||||||| |||||| || ||     
T  14765216 aggcttaatacat---tctccggtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaattttttgc 14765120  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
     |||||| |||| |||||| || ||||||    
T  14765119 agtttactatttcggtcctctccgttagt 14765091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 498
Target Start/End: Original strand, 25785962 - 25786087
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| ||||||||| |||    
T  25785962 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgt 25786058  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    ||||||  ||||||||||| |||||||||    
T  25786059 cgtttattattttggtcctctctgttagt 25786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 22167797 - 22167902
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||| ||| |||||||  |||||||| ||| |||||||| |||||||||| |||||||||||| ||||||  |||||||| || |||||||    
T  22167797 ttaacttattttaatttctcagtttagtcccttaaatattaagtgtttcaatttggtcccataaatcttctgccgtttattattttggttctctctgtta 22167896  T
Q  497 gttttt 502  Q
    ||||||    
T  22167897 gttttt 22167902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 13930780 - 13930668
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||  |||||||||||||| | |||||||||| |||| |||| |||||||||||||||||||||||    
T  13930780 tggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctt 13930681  T
Q  490 tctgttagttttt 502  Q
    || ||| ||||||    
T  13930680 tccgtttgttttt 13930668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 40812715 - 40812604
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| |||||||||||||||||   |||||| |||||||||||| |||||| | ||||||||  ||||| ||||||| | ||||| ||||||||| |||    
T  40812715 ggtcccttaacttattttattttcctagtttggtcccttaactattaagtgtctcaatttggttatataactcttctgccatttactattttggtctttt 40812616  T
Q  491 ctgttagttttt 502  Q
    ||||||||||||    
T  40812615 ctgttagttttt 40812604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 42248410 - 42248312
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||||| ||||||||||    ||||| |||| |||| |||||||||||||| | |||||||||||||||||||| |||||||||||||||| |||||    
T  42248410 tggtccttcaacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcct 42248312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 370 - 500
Target Start/End: Original strand, 14390252 - 14390379
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| |||||||||||| |  ||||| |||| |||  |||||||||| ||| | |||||||| | ||||||||||| |    
T  14390252 aggcttaatacatgctt---tggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttcttt 14390348  T
Q  470 cgtttaccattttggtcctttctgttagttt 500  Q
    ||||||||||||||||||| || ||||||||    
T  14390349 cgtttaccattttggtcctctccgttagttt 14390379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 26056252 - 26056140
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | |||||||||| ||||||||| |||||||||| |||||||||||     
T  26056252 tggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctc 26056153  T
Q  490 tctgttagttttt 502  Q
    || ||||| ||||    
T  26056152 tccgttagatttt 26056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 390 - 497
Target Start/End: Complemental strand, 3979418 - 3979311
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| | |||||||||| |||| ||||||| ||||||| |||||||||||     
T  3979418 tggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctc 3979319  T
Q  490 tctgttag 497  Q
    || |||||    
T  3979318 tccgttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 24517718 - 24517607
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| ||||||| ||||||||| | | |||||| | |||||||||| ||||||||||    |||||| | | |||||||||    
T  24517718 ggtcccttaacttattttattttctcagtttaatcccttaatttttaagtgtgtcaatttggtcccataaatcttcctctgtttactaatgtggtccttt 24517619  T
Q  491 ctgttagttttt 502  Q
    ||||||||||||    
T  24517618 ctgttagttttt 24517607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 466
Target Start/End: Complemental strand, 40110774 - 40110681
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    ||||||||||||||| ||   | ||| ||||||||||||||||| ||||||||||||||||||||| |||||| | |||||||||| |||| |||||    
T  40110774 aggcttaatacatccctc---gatcccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtcccataagtcttc 40110681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 13641275 - 13641364
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||||||||| ||||||| |||||||||    
T  13641275 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtc 13641364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 486
Target Start/End: Original strand, 26054931 - 26055004
Alignment:
Q  413 tttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||| |||| |||| |||||||||||||||| |||||||| | |||||||||||||||||||| |||||||||    
T  26054931 tttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtc 26055004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 502
Target Start/End: Original strand, 26801965 - 26802066
Alignment:
Q  401 cttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttt 500  Q
    ||||||||||||||||||||||||||||||||||| |||||| | ||||| |||  |||| |||||   ||||||| | | ||||||||||||||| |||    
T  26801965 cttattttattttttcagtttgatcccttaactattaagtgtgtaaatttagtctcataagtcttcctccgtttactaatatggtcctttctgttacttt 26802064  T
Q  501 tt 502  Q
    ||    
T  26802065 tt 26802066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 502
Target Start/End: Complemental strand, 49141617 - 49141489
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   ||||||||||| |||||||   |||||| || |||||||||||||| |||||||| || ||||||| |||| | ||||| |    
T  49141617 ggcttaatacatcgtt---tggtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgcc 49141521  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||| ||| | || ||||||||||    
T  49141520 gtttaccattttagtcatctccgttagttttt 49141489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 488
Target Start/End: Original strand, 3978038 - 3978153
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||    ||||| |||| ||| ||||||||||||||| | |||||| ||| |||| ||||||||    
T  3978038 aggcttaatacatcatt---tggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgt 3978134  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||| |||||||||||    
T  3978135 cgtttactattttggtcct 3978153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 9633786 - 9633898
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||||||||||||||||   |||||| |||| ||||||||||||||||||| | ||||||||  |||||||||||   |||||||  ||||| ||||     
T  9633786 tggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttacagttttgatcctc 9633885  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  9633886 tccgttagttttt 9633898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 47410995 - 47411091
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| |||| |||||||   |||||| ||||||||| |||||||||||||| | |||||||||  ||||||||| |||||||||| |||||||||    
T  47410995 tggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtc 47411091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 502
Target Start/End: Original strand, 40811207 - 40811318
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||| || ||| | |||||| ||| |||| |||| || ||||||  ||||||||| | |    
T  40811207 ggtcccttaacttattctattttctcagtttgatcccttaactattaaatgtctcaatttgatcccataactcttttgccgtttattattttggtcatct 40811306  T
Q  491 ctgttagttttt 502  Q
    | ||||||||||    
T  40811307 ccgttagttttt 40811318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 486
Target Start/End: Original strand, 51725355 - 51725450
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||| ||||||||||||| ||| |||||||  ||| ||||||||||||||| | |||||| |||||||||  ||||| |||||| ||||||||||    
T  51725355 ggtcccttaacttattttaatttctcagtttagtcctttaactataaagtgtctcaatttgatcctataaaatttctgccgtttatcattttggtc 51725450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 9592271 - 9592361
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||| |||| |||||||||||||||| |||||| ||| ||||||||| |||||||||| |||||| || |||| |||| |||||    
T  9592271 ttttcactttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttt 9592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 13929306 - 13929404
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||| ||||||||||||   |||||| |||| ||||||||||||||||||| | ||||||||||  ||||||||||  |||||| ||| ||||||||    
T  13929306 tggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttggtcct 13929404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 25787286 - 25787161
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||  ||||||||| ||     
T  25787286 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgc 25787190  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    | ||||| ||||||||||| || ||||||    
T  25787189 catttactattttggtcctctccgttagt 25787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 2973106 - 2973001
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | |||||| |||  |||||||| |||||||||| | ||||||||||||||| ||||    ||||||| | | |||||||||||||||    
T  2973106 ttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttactagtgtggtcctttctgtta 2973007  T
Q  497 gttttt 502  Q
    ||||||    
T  2973006 gttttt 2973001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 476
Target Start/End: Complemental strand, 38283843 - 38283758
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttac 476  Q
    ||||| |||||||||||||||||||||||||  |||  || |||| |||||| | |||||||||||||| ||||||| ||||||||    
T  38283843 ggtcccttaacttattttattttttcagtttagtcctctatctattaagtgtgtcaatttggtcctatatatcttctttcgtttac 38283758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 52181410 - 52181314
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||||||||| | |||||| |||| |||  |||||||||||||| | ||||| |||  ||||||||| ||| |||||| |||||||||    
T  52181410 tggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtc 52181314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 498
Target Start/End: Original strand, 8092610 - 8092717
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| ||||| |  |||||||||||| |||||| | |||||||| | ||||||||||   |||||||   |||||||||||    
T  8092610 ggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtatcaatttggttccataaatcttcctccgtttactgatttggtccttt 8092709  T
Q  491 ctgttagt 498  Q
    | ||||||    
T  8092710 ccgttagt 8092717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 14171347 - 14171280
Alignment:
Q  416 cagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttg 483  Q
    |||||||||||||||| |||||| ||||| |||||||||| ||||||| |||||| ||||| ||||||    
T  14171347 cagtttgatcccttaattataaaatgtttcaatttggtcccataaatcatctgtcatttactattttg 14171280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 24516346 - 24516409
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||| |||||| | |||||||||    
T  24516346 ggtcccttaacttattttattttctgagtttgatcccttaactattaagtgtgtcaatttggtc 24516409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 504
Target Start/End: Original strand, 21277005 - 21277119
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |  | |||||||||||| | | |||||||||| |||||||||||| ||||||| |||||| ||||     
T  21277005 tggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtttactattttgatcctc 21277104  T
Q  490 tctgttagtttttga 504  Q
    ||  |||||||||||    
T  21277105 tccattagtttttga 21277119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 47560133 - 47560246
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||| ||||||||   |||||| |||| |||| |||||||||||||||| |||||| |||| ||||| |||||     
T  47560133 aggcttaatacatcatt---tggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgc 47560229  T
Q  470 cgtttaccattttggtc 486  Q
    |||||||  ||||||||    
T  47560230 cgtttactgttttggtc 47560246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 486
Target Start/End: Original strand, 16217490 - 16217547
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||||| | |||||||||||||||||||| |||| ||||| |||||||||    
T  16217490 taactataaagtgtctcaatttggtcctataaatcttatgtcatttactattttggtc 16217547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 502
Target Start/End: Original strand, 20953338 - 20953411
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||| | ||||||||||||||||||||  ||| ||||||||||| ||||| || ||||| ||||    
T  20953338 taactataaagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcctctccgttagatttt 20953411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 26803320 - 26803260
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttg 451  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||| |||||| | ||||||    
T  26803320 ggtcccttaacttattttattttctcagtttgatctcttaactattaagtgtgtcaatttg 26803260  T

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Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 454
Target Start/End: Original strand, 45042620 - 45042684
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| | || ||||| || ||||||    
T  45042620 tggtcctttaatttattttattttctcagtttgatcccttaactgttaaatgtttcaaattggtc 45042684  T

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Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 50679926 - 50679814
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||| | |||| ||||||||||||||||||| | |||||||||| |||| |||||   ||||||| | | |||||||     
T  50679926 tggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctc 50679827  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  50679826 tccgttagttttt 50679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 43808643 - 43808562
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||||||||||   ||||| ||||||||||||| ||| ||||| || |||||||||||| ||  |||| |||||||||    
T  43808643 aggcttaatacatccttc---ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 43808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 47136809 - 47136684
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   || ||| ||||||||||||   |||||| || | |||| |||||||||||||| | ||||||||   ||||||||| ||     
T  47136809 aggcttaatacatcatt---tgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgc 47136713  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    ||||||| ||||||||||| || ||||||    
T  47136712 cgtttactattttggtcctctccgttagt 47136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 483
Target Start/End: Complemental strand, 47411569 - 47411460
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||  |||| | || |||||||||||||| | |||||||||| ||||||||| || |    
T  47411569 ggcttaatacatcatt---tggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatcttatgcc 47411473  T
Q  471 gtttaccattttg 483  Q
    |||||| ||||||    
T  47411472 gtttactattttg 47411460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 421 - 486
Target Start/End: Complemental strand, 16218552 - 16218487
Alignment:
Q  421 tgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||| |||||||||||| | | |||||||||| ||||||||| |||||||||  |||||||||    
T  16218552 tgatcccctaactataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtc 16218487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 30743099 - 30743164
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||||||||| ||| ||| | || |||||||||||| || ||||| |||||||||||    
T  30743099 ggtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtcct 30743164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 43807447 - 43807512
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||||||||| ||| |||||||  ||| |||||||| || ||||| |||||||||||    
T  43807447 ggtcctttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcct 43807512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 500
Target Start/End: Complemental strand, 2238100 - 2237973
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | ||||||||||  ||  ||||||||    
T  2238100 aggcttaatacatgctt---tggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgt 2238004  T
Q  470 cgtttaccattttggtcctttctgttagttt 500  Q
    ||||  |  |||||||||| || ||||||||    
T  2238003 cgttacctcttttggtcctctccgttagttt 2237973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 454
Target Start/End: Original strand, 38280846 - 38280925
Alignment:
Q  372 gcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||||||||||| |   |||||||||| |||||||||||| |||||||| ||| |||||||| || ||| | |||||||||    
T  38280846 gcttaatacatcctcc---ggtcctttaagttattttattttctcagtttggtccattaactattaattgtgtcaatttggtc 38280925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 454
Target Start/End: Original strand, 48467272 - 48467336
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||| |||||||||||| | |||||| |||| | || |||||||||||||||| |||||||||    
T  48467272 tggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtc 48467336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 49139812 - 49139924
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||  |||| |||| |||||||||||||| | |||||||||  |||||||||| |  |||||| ||||||||  |     
T  49139812 tggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcagtttactattttggtaatc 49139911  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  49139912 tccgttagttttt 49139924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 434
Target Start/End: Complemental strand, 22169322 - 22169280
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaacta 434  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||    
T  22169322 gtcccttaacttattttaatttctcagtttgatcccttaacta 22169280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 473
Target Start/End: Original strand, 2236807 - 2236907
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | ||||||||||  ||  ||||||||    
T  2236807 aggcttaatacatgctt---tggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgt 2236903  T
Q  470 cgtt 473  Q
    ||||    
T  2236904 cgtt 2236907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 451
Target Start/End: Original strand, 34653446 - 34653507
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttg 451  Q
    |||||| ||||||||||||   |||||| |||| ||||||||||||||||||| | ||||||    
T  34653446 tggtcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaatttg 34653507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 21246579 - 21246535
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactat 435  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||||||    
T  21246579 ggtcccttaacttattttaatttctcagtttggtcccttaactat 21246535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 496
Target Start/End: Original strand, 48332760 - 48332832
Alignment:
Q  424 tcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| || ||||| |||||||||||||||||  |||  |||||||    ||||||||||||||||    
T  48332760 tcccttaactattaaatgtttcaatttggtcctataaatactcttccgtttacttagttggtcctttctgtta 48332832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 454
Target Start/End: Original strand, 52437919 - 52437983
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||| ||||||||||||| | |||||| |||| || ||||||||| || |||||||| ||||||    
T  52437919 tggtcttttaacttattttctgttttcaatttggtctcttaactattaaatgttttaaattggtc 52437983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 31740377 - 31740265
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    ||||||||||||||||||| | |||||| |||| ||||||||||||||||||| | |||||||||| ||||||||| || |||||||||||||||||||     
T  31740377 tggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtccta 31740278  T
Q  490 tctgttagttttt 502  Q
    || ||| ||||||    
T  31740277 tccgtttgttttt 31740265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 392 - 502
Target Start/End: Complemental strand, 14328877 - 14328767
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||  |||| |||| |||||||||| ||||||||||| ||    
T  14328877 gtcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctc 14328778  T
Q  492 tgttagttttt 502  Q
     |||| |||||    
T  14328777 cgttacttttt 14328767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 392 - 502
Target Start/End: Complemental strand, 14421887 - 14421777
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||  |||| |||| |||||||||| ||||||||||| ||    
T  14421887 gtcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctc 14421788  T
Q  492 tgttagttttt 502  Q
     |||| |||||    
T  14421787 cgttacttttt 14421777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 31738357 - 31738486
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||||| |||||||||| |||| |||||||     
T  31738357 aggcttaatacatcctt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgc 31738453  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
     |||||||||||||||||| || ||||||||||    
T  31738454 ggtttaccattttggtcctctccgttagttttt 31738486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 370 - 488
Target Start/End: Original strand, 5311273 - 5311388
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||  |||| |||||||||||||| | |||||||||||||||||||| |||    
T  5311273 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgt 5311369  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||| |||||||||||    
T  5311370 cgtttactattttggtcct 5311388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 33802122 - 33802010
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| |||||||| ||| ||||||||||||| ||||||| | ||||||||     
T  33802122 tggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagtttaccgtattggtcctc 33802023  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  33802022 tccgttagttttt 33802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 8412421 - 8412313
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| |||||||||||| | |||||| |||  |||| |||||||||||||| | |||||||||| ||||||||| || ||||||| |||||||||||     
T  8412421 tggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctc 8412322  T
Q  490 tctgttagt 498  Q
    || ||||||    
T  8412321 tccgttagt 8412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 496
Target Start/End: Original strand, 14326171 - 14326270
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| ||||||||||||||||| |||  || || | |||||||||| |||| |||||| |||||||| ||| |||||||||| ||||    
T  14326171 ttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattcttctatcgtttactattgtggtcctttccgtta 14326270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 496
Target Start/End: Original strand, 14419181 - 14419280
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| ||||||||||||||||| |||  || || | |||||||||| |||| |||||| |||||||| ||| |||||||||| ||||    
T  14419181 ttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattcttctatcgtttactattgtggtcctttccgtta 14419280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 22300001 - 22299912
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||||||||| ||||||| |||||||||    
T  22300001 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtc 22299912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 488
Target Start/End: Complemental strand, 293723 - 293647
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||| ||||||| | ||| |||||||||||| |||||||||  |||| |||||||||||||||||||||||||||    
T  293723 ttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcct 293647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 27440280 - 27440168
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| ||||||||||||||| |||| ||| | |||||||||| |||||||||||  ||||||| |||||||||||     
T  27440280 tggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctc 27440181  T
Q  490 tctgttagttttt 502  Q
    || |||| |||||    
T  27440180 tccgttaattttt 27440168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 488
Target Start/End: Original strand, 33129293 - 33129387
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||||||| |||||||| |||||||||||  || |||||||||||||||| | ||||||||| |||||   || ||||||||| ||||||||||||    
T  33129293 ggtcctttaatttattttaatttttcagtttagtctcttaactataaagtgtctcaatttggtcttataa---ttttgtcgtttatcattttggtcct 33129387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 486
Target Start/End: Original strand, 9927615 - 9927712
Alignment:
Q  388 tctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||| |||||||||||| | |||| |||||| |||| |||||||||||||| | |||||||||| ||||| ||||  |||||||| |||||||||    
T  9927615 tctggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa-cttcaatcgtttactattttggtc 9927712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 13800043 - 13800117
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatctt 465  Q
    ||||| ||||||||||||||||| |||||||| |||||||||||| || ||| | |||||||||| |||||||||    
T  13800043 ggtcccttaacttattttattttctcagtttggtcccttaactattaattgtgtcaatttggtcccataaatctt 13800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 33807707 - 33807812
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| |||| ||||||||||||||||||| | |||||| | | |||||| ||||| |||||||| |||||||||| || ||||    
T  33807707 ttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtcctctccgtta 33807806  T
Q  497 gttttt 502  Q
     |||||    
T  33807807 attttt 33807812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 488
Target Start/End: Original strand, 8411104 - 8411195
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||||||||   |||||| |||  |||| |||||||||||||| | ||||||||| |||||||||| || ||||||| |||||||||||    
T  8411104 ttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcct 8411195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 456
Target Start/End: Complemental strand, 1693079 - 1693020
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||| |||||||||||| |||||||||||| ||   |||||||||||||||    
T  1693079 ttaacttattttaatttttcagtttggtcccttaactattaaacattttaatttggtcct 1693020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 1757615 - 1757533
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||||| |   ||||| ||||||||||||| ||| |||||||| |||||||||||| ||  |||| |||||||||||    
T  1757615 ggcttaatacatcctcc---ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 1757533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 438
Target Start/End: Complemental strand, 5693685 - 5693644
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaa 438  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  5693685 ttaacttattttattttctcaatttgatcccttaactataaa 5693644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 16269866 - 16269821
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgt 442  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  16269866 ttaacttattttattttctcagtttgatctcttaactattaagtgt 16269821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 452
Target Start/End: Complemental strand, 27108278 - 27108217
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttgg 452  Q
    ||||| ||||||||||||| ||| |||||||| |||||||||||| ||  ||||||||||||    
T  27108278 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27108217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 452
Target Start/End: Complemental strand, 27150075 - 27150014
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttgg 452  Q
    ||||| ||||||||||||| ||| |||||||| |||||||||||| ||  ||||||||||||    
T  27150075 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttgg 27150014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 34084253 - 34084148
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| |||||||||||    |||||| |||| |||  ||| |||||||||| | |||||||||  ||||||||||||||    
T  34084253 ggcttaatacatcatt---tggtcccttaacttatttctggttttcactttggtcc--taaatataaagtgtctcaatttggtctcataaatcttctgtc 34084159  T
Q  471 gtttaccattt 481  Q
    |||||||||||    
T  34084158 gtttaccattt 34084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 18139592 - 18139480
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| ||||||||  |||||||||||||| | || |||||||  || |||||||| ||||||   ||||||||||     
T  18139592 tggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttggtcctc 18139493  T
Q  490 tctgttagttttt 502  Q
    ||  |||||||||    
T  18139492 tccattagttttt 18139480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 27438801 - 27438897
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||    ||||| |||| ||| ||||||||||||||| | |||||| ||| |||||| ||||| |||||||  ||||||||    
T  27438801 tggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtc 27438897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 491
Target Start/End: Original strand, 21127943 - 21128037
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| |||| ||||||| ||||||||||||||||| ||||    
T  21127943 ttaacttattttattttttcagtttgatctcttaactattaagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcatttc 21128037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 43345337 - 43345442
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| |||||| | ||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||  | || ||||    
T  43345337 ttaacttattttattttctcagttaggtcccttaactataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgtta 43345436  T
Q  497 gttttt 502  Q
    ||||||    
T  43345437 gttttt 43345442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 391 - 502
Target Start/End: Original strand, 23559831 - 23559942
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| |||||||| |||||||| ||| |||||| | |||||| ||| |||| ||||||||||||||| ||||||||||| |    
T  23559831 ggtcccttaacttattttattttctcagtttggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctct 23559930  T
Q  491 ctgttagttttt 502  Q
    | ||||||||||    
T  23559931 ccgttagttttt 23559942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 35174480 - 35174375
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||| ||  |||||| |||| |||||| |||||||| ||||||||| |||||||||    
T  35174480 ttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtta 35174381  T
Q  497 gttttt 502  Q
     |||||    
T  35174380 attttt 35174375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 43346545 - 43346456
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| | |||||||||  |||| |||||||||||||| ||||||||||    
T  43346545 ttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtctcataactcttctgtcgtttatcattttggtc 43346456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 51825726 - 51825630
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||    ||||| |||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  51825726 tggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtc 51825630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 370 - 487
Target Start/End: Complemental strand, 11220780 - 11220666
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | ||||||||||||||||||||||||    
T  11220780 aggcttaatacatgctt---tggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgt 11220684  T
Q  470 cgtttaccattttggtcc 487  Q
    ||||||| ||||||||||    
T  11220683 cgtttactattttggtcc 11220666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 397 - 476
Target Start/End: Complemental strand, 23561223 - 23561144
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttac 476  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||| |||||||    
T  23561223 ttaacttattttattttctcagtttgatcccttaattattaagtgtcttaatttggtcctataattcttctgacgtttac 23561144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 47855460 - 47855331
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| ||| ||||||||||||||| | |||||||||||||||||||||||     
T  47855460 aggcttaatacatgctt---tggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgc 47855364  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||||||||||| || |||| |||||    
T  47855363 cgtttactattttggtcctctccgttatttttt 47855331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 32980550 - 32980445
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | |||||| |||| |||| |||||| ||||||| | ||||||||||||||||||||||| ||||||| ||||||||| | || ||||    
T  32980550 ttaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T
Q  497 gttttt 502  Q
    ||||||    
T  32980450 gttttt 32980445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 371 - 497
Target Start/End: Complemental strand, 54654087 - 54653964
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| | |||||||||| |||| |||||||||    
T  54654087 ggcttaatacatcatt---tggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtc 54653991  T
Q  471 gtttaccattttggtcctttctgttag 497  Q
    |||||| ||||||||||| || |||||    
T  54653990 gtttactattttggtcctctccgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 12062488 - 12062377
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||| || | |||| ||  |||||| ||||||||| |||    
T  12062488 ggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgtttactattttggtcattt 12062389  T
Q  491 ctgttagttttt 502  Q
    |  |||||||||    
T  12062388 ccattagttttt 12062377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 503
Target Start/End: Complemental strand, 42634008 - 42633878
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||| ||||| | |||||||||| ||||||||| |||    
T  42634008 aggcttaatacatcatt---tggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgt 42633912  T
Q  470 cgtttaccattttggtcctttctgttagtttttg 503  Q
    ||||||  ||||||||||| ||||||||| ||||    
T  42633911 cgtttattattttggtcctctctgttagtatttg 42633878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 392 - 498
Target Start/End: Original strand, 35173160 - 35173266
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| ||| ||| ||||||||||||| |||| ||| |||||||||  |||| |||| |||||||||| ||||||||| ||||    
T  35173160 gtcccttaacttattttattttctcaatttcatcccttaactattaagtatttcaatttggtctcataactcttttgtcgtttactattttggtcatttc 35173259  T
Q  492 tgttagt 498  Q
    | |||||    
T  35173260 tattagt 35173266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 390 - 505
Target Start/End: Complemental strand, 49122107 - 49121992
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||||||||||||||||   |||||| |||| || |||||||||||||||| | |||||||||  |||| | ||||| ||||||||||||||||| ||    
T  49122107 tggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgtttaccattttggtcttt 49122008  T
Q  490 tctgttagtttttgat 505  Q
    || ||| | |||||||    
T  49122007 tccgtttggttttgat 49121992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 8371214 - 8371343
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   || ||| |||||||||||| | |||||| |||| |||| |||||||||| ||| | |||||||| | ||||||||||||     
T  8371214 aggcttaatacatcatt---tgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgc 8371310  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
     |||||| ||||||||||| || ||||||||||    
T  8371311 agtttactattttggtcctctccgttagttttt 8371343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 502
Target Start/End: Original strand, 29536748 - 29536837
Alignment:
Q  413 tttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    ||||| ||||||||  |||||||||||||| | |||||||||| ||||||||||| |||||||| ||||||||||| || ||||| ||||    
T  29536748 tttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcctctccgttagctttt 29536837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 48866159 - 48866264
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||||||| |||||||  ||||| |||||| |||||| | ||||||||||||||| ||||||  ||||||| | | ||||||| || ||||    
T  48866159 ttaacttattttattttctcagtttagtccctgaactattaagtgtgtcaatttggtcctataagtcttcttccgtttactaatatggtcctctccgtta 48866258  T
Q  497 gttttt 502  Q
    ||||||    
T  48866259 gttttt 48866264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 454
Target Start/End: Original strand, 38639025 - 38639093
Alignment:
Q  386 tctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||  ||||||||    
T  38639025 tctctggttccttaacttattttagtttttcagtttggtcccttaactataaagtgtttcgatttggtc 38639093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 51400226 - 51400338
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||||| || |||||||||||||| | ||||| |||| |||||| ||| | ||| ||||||||||||||||    
T  51400226 tggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtcctt 51400325  T
Q  490 tctgttagttttt 502  Q
    || ||| ||||||    
T  51400326 tccgtttgttttt 51400338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 475
Target Start/End: Complemental strand, 51401459 - 51401371
Alignment:
Q  387 ctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgttta 475  Q
    ||||||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||||||||| ||||||    
T  51401459 ctctggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 48867534 - 48867423
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| ||| |||| |||||||||||| |||||| | |||||||||| || | ||||    ||||||| | | |||||||||    
T  48867534 ggtcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtcccattagtctttctacgtttactaatgtggtccttt 48867435  T
Q  491 ctgttagttttt 502  Q
    ||||||||||||    
T  48867434 ctgttagttttt 48867423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 7820385 - 7820513
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    |||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||  |||||||||||||||| ||||||| || |||||| || ||||    
T  7820385 ggcttaatacatgctt---tggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtc 7820481  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    ||||||  |||||||||| || ||||||||||    
T  7820482 gtttactgttttggtcctctccgttagttttt 7820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 502
Target Start/End: Complemental strand, 29537204 - 29537135
Alignment:
Q  433 tataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| ||||||||||| |||| |||||||||||| ||||||| ||||||||||| || ||||||||||    
T  29537204 tataaaatgttttaatttcgtcccataaatcttctgccgtttacaattttggtcctctccgttagttttt 29537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 498
Target Start/End: Original strand, 42632701 - 42632825
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| |||||||| |||   |||||| |||| |||| |||||||||||||| | |||||| ||| ||||||||| ||||    
T  42632701 ggcttaatacatcatt---tggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtc 42632797  T
Q  471 gtttaccattttggtcctttctgttagt 498  Q
    |||||| ||||| ||||| || ||||||    
T  42632798 gtttactattttagtcctctccgttagt 42632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 502
Target Start/End: Complemental strand, 49334439 - 49334330
Alignment:
Q  393 tcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttct 492  Q
    |||||| ||||||||| | |||||| |||| ||| ||||||||||| ||| | ||| |||||| |||||||||||  ||||||| |||||| || | |||    
T  49334439 tcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactattttgatcatctct 49334340  T
Q  493 gttagttttt 502  Q
    ||||||||||    
T  49334339 gttagttttt 49334330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 488
Target Start/End: Original strand, 41386124 - 41386239
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||| | |||||||||  |     
T  41386124 aggcttaatacatcgtt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacga 41386220  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||| |||||||||||    
T  41386221 cgtttactattttggtcct 41386239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 47808209 - 47808113
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| ||||||||||||    ||||| |||| | ||||||||||||||||| | |||||||||  |||||||||||||||||| | |||||||||||    
T  47808209 gtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcct 47808113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 488
Target Start/End: Original strand, 54752610 - 54752725
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||  |||| |||||||||||||| | ||||||||||| || ||||| ||     
T  54752610 aggcttaatacatcatt---tggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgc 54752706  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||| |||||||||||    
T  54752707 cgtttactattttggtcct 54752725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 456
Target Start/End: Original strand, 4067944 - 4068003
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||||||||||| ||| ||||||| ||||||||||||| || |||||||||||||||||    
T  4067944 ttaacttattttaatttatcagtttaatcccttaactattaaatgttttaatttggtcct 4068003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 502
Target Start/End: Original strand, 25583127 - 25583237
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||   |||||| |||| |||| ||||||| ||  || | |||||||||| |||| ||||||| ||||||| ||||||||||| ||    
T  25583127 gtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactattttggtcctctc 25583226  T
Q  492 tgttagttttt 502  Q
    ||||| |||||    
T  25583227 tgttaattttt 25583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 488
Target Start/End: Original strand, 36626742 - 36626840
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||||||||||||||| | ||| || |||| |  | ||||||| |||||||| ||||||||||  |||||||| ||||||||||  ||||||||||    
T  36626742 tggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggtcct 36626840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 26799004 - 26798899
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||| | |||| |||| |||||||||| ||| | |||||||||| |||| |||||   ||||||||||||||||||| || ||||    
T  26799004 ttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgtttaccattttggtcctctccgtta 26798905  T
Q  497 gttttt 502  Q
    ||||||    
T  26798904 gttttt 26798899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 39531920 - 39531855
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| ||||||| ||||||||||||| || ||||| |||||||||||    
T  39531920 ggtcccttaacttattttaatttctcagtttaatcccttaactatgaaatgtttcaatttggtcct 39531855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 47806852 - 47806936
Alignment:
Q  413 tttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagt 498  Q
    ||||| |||| |||||||| |||||||||| | |||||| ||||||||||||||||  ||||| |||||||||||| || ||||||    
T  47806852 tttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgctgttta-cattttggtcctctccgttagt 47806936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 53808329 - 53808425
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||   |||| | |||| || | |||||||||||||| | ||| |||||| ||||||||| |||||||||| |||||||||    
T  53808329 tggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttggtc 53808425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 483
Target Start/End: Original strand, 10986685 - 10986756
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttg 483  Q
    |||||| |||| ||| ||||||||||||||||| ||||||||||||||||| ||  | ||||||| ||||||    
T  10986685 ttttcactttggtccattaactataaagtgtttcaatttggtcctataaattttacgccgtttactattttg 10986756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 496
Target Start/End: Complemental strand, 10987751 - 10987652
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||| || || |||||   ||||||||||| |||||||    
T  10987751 ttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgttttttattttggtcctctctgtta 10987652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 484
Target Start/End: Complemental strand, 13078049 - 13077962
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttgg 484  Q
    ||||||||||||   |||||| |||| |||  ||| |||||| ||| |||||||||||| ||||||||| |||||||||| |||||||    
T  13078049 ttaacttatttttgattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatcttatgtcgtttactattttgg 13077962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 455
Target Start/End: Complemental strand, 7921764 - 7921683
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    ||||||||||||||| |   ||||| |||||||||||| |||| ||||||||||| ||||||||| |||||| | || |||||||    
T  7921764 ggcttaatacatcctcc---ggtcccttaacttattttgttttctcagtttgatcacttaactattaagtgtctcaaattggtcc 7921683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 488
Target Start/End: Complemental strand, 19253099 - 19253009
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||||||||   |||||| |||| |||| ||| |||||| ||| | |||||| ||| |||||| ||||| |||||||||||||||||||    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcct 19253009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 32999815 - 32999869
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttg 451  Q
    ||||||||||||| ||| |||||||| |||||||||||| || ||||||||||||    
T  32999815 ttaacttattttaatttctcagtttggtcccttaactattaaatgttttaatttg 32999869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 33000897 - 33000839
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    |||||||||||| ||| ||||||||||||||||||||| ||  |||| |||||||||||    
T  33000897 taacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtcct 33000839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 41387555 - 41387430
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||| ||| | |||||||||| ||||| |||        
T  41387555 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacac 41387459  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    ||||||| ||||||||||| || ||||||    
T  41387458 cgtttactattttggtcctctccgttagt 41387430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 463
Target Start/End: Complemental strand, 8372721 - 8372648
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatc 463  Q
    |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||||    
T  8372721 tggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatc 8372648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 39133035 - 39133140
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| |||| |||| |||||||||||||| | ||||||||||  ||  |||||| |||||  |  |||||||||| |||||||    
T  39133035 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgtta 39133134  T
Q  497 gttttt 502  Q
    ||||||    
T  39133135 gttttt 39133140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 483
Target Start/End: Original strand, 43101905 - 43101998
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttg 483  Q
    |||||| ||||||||||||   |||||| |||| |||  ||| |||||||||| | |||||||||| |||| |||||||||| |||| ||||||    
T  43101905 tggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactattttg 43101998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 498
Target Start/End: Complemental strand, 43103394 - 43103293
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | |||| | ||||||||| |||||| ||| | | | ||||||||   |||||| ||||| ||||||| |||||||||||||| ||||    
T  43103394 ttaacttattttttatttttattttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccgtttactattttggtcctttccgtta 43103295  T
Q  497 gt 498  Q
    ||    
T  43103294 gt 43103293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 49333001 - 49333106
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | ||||||||||| || | | |||||||||||| |||| ||||||  |||| ||| |||| |||||||||| ||| | | || ||||    
T  49333001 ttaacttattttttattttcagtttggtctcatgactataaagtgtcttaacttggtctcataactctactgttgtttaccattctggccatctcggtta 49333100  T
Q  497 gttttt 502  Q
    ||||||    
T  49333101 gttttt 49333106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 50150733 - 50150798
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| |||||||| || ||||||||| || ||||| |||||||||||    
T  50150733 ggtcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtcct 50150798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 486
Target Start/End: Original strand, 11219441 - 11219537
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | |||||||||  || | ||||||| ||||||| |||||||||    
T  11219441 tggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtc 11219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 488
Target Start/End: Original strand, 12060671 - 12060767
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| ||||||||||||||||| |||||||  || ||||||||| |||||| | ||||||| |  |||| | || || ||||||| |||||||||||    
T  12060671 gtcccttaacttattttattttctcagtttagtctcttaactattaagtgtctcaatttggcctcataactattttgccgtttactattttggtcct 12060767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 473
Target Start/End: Complemental strand, 19579415 - 19579316
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    |||||||||||| |||   |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| | ||||||||||  ||  |||||||||    
T  19579415 ggcttaatacatgctt---tggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtc 19579319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 453
Target Start/End: Original strand, 46688417 - 46688481
Alignment:
Q  389 ctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggt 453  Q
    ||||||||||||||||||||| ||| ||| ||||||||  ||| ||| || ||||||||||||||    
T  46688417 ctggtcctttaacttattttaatttctcaatttgatcctgtaattattaaatgttttaatttggt 46688481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 1031828 - 1031891
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||| ||||||||||||| ||| ||||| || |||||||||||| || ||||| |||||||||    
T  1031828 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaatttggtc 1031891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 501
Target Start/End: Original strand, 19622016 - 19622127
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    ||||||||||| |||||||   |||||| |||| |||| |||||||||||||| | ||||| |||  ||||||||||||   |||||   |||||||||     
T  19622016 tggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttggtcctc 19622115  T
Q  490 tctgttagtttt 501  Q
    || |||||||||    
T  19622116 tccgttagtttt 19622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 45730647 - 45730710
Alignment:
Q  389 ctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttgg 452  Q
    ||||||| ||||||||||||| ||| |||||||| |||||||||||| ||  |||| |||||||    
T  45730647 ctggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttgg 45730710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 455
Target Start/End: Complemental strand, 17350223 - 17350142
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | ||||||||||    
T  17350223 ggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcc 17350142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 460
Target Start/End: Complemental strand, 30432717 - 30432647
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataa 460  Q
    |||||||||||||||||||    ||||| ||||||||||||||| ||||  |||| |||||||||| ||||    
T  30432717 tggtcctttaacttatttttaaatttcattttgatcccttaactttaaaccgtttcaatttggtcccataa 30432647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 500
Target Start/End: Complemental strand, 52293628 - 52293518
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | ||||||||||| ||  |||||| |||||  |  ||||||||||     
T  52293628 tggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacctcttttggtcctc 52293529  T
Q  490 tctgttagttt 500  Q
    || ||||||||    
T  52293528 tccgttagttt 52293518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 486
Target Start/End: Original strand, 2124079 - 2124136
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||| | | |||||||||||| ||||||||| || ||||||| |||||||||    
T  2124079 taactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtc 2124136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 451
Target Start/End: Complemental strand, 11483092 - 11483031
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttg 451  Q
    |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| ||||||||    
T  11483092 tggtcccttaacttattttcagatttcattttggtcccttaactataaagtgtcttaatttg 11483031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 39530807 - 39530872
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| ||||| ||||||||||||||| ||  |||| |||||| ||||    
T  39530807 ggtcccttaacttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttgatcct 39530872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 473
Target Start/End: Original strand, 53047891 - 53047991
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | ||||||||||  ||  ||||||||    
T  53047891 aggcttaatacatgctt---tggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgt 53047987  T
Q  470 cgtt 473  Q
    ||||    
T  53047988 cgtt 53047991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 53901587 - 53901644
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||| |||||||| ||| |||||||  |||||||||||| || |||||||||||||||    
T  53901587 ttaatttattttaatttctcagtttagtcccttaactattaaatgttttaatttggtc 53901644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 17345322 - 17345433
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   ||||||| ||| |||| |||||| ||||| | | |||||||| |  |||||||||| ||  ||||| ||||||||||     
T  17345322 tggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatcttct-tctgttacctttttggtcctc 17345420  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  17345421 tccgttagttttt 17345433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 460
Target Start/End: Original strand, 23886694 - 23886781
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataa 460  Q
    ||||||||||||| |||   |||||| |||||||||||| |  ||||| ||| ||||||||||| |||| ||| | |||||||||| ||||    
T  23886694 aggcttaatacatgctt---tggtcccttaacttattttttaatttcatttttatcccttaactttaaaatgtctcaatttggtcccataa 23886781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 502
Target Start/End: Complemental strand, 25585882 - 25585826
Alignment:
Q  446 aatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||  |||||||||||||||||||| ||||| ||| | || ||||||||||    
T  25585882 aatttggtctcataaatcttctgtcgtttactattttagtcatctccgttagttttt 25585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 48252944 - 48253020
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||| |||||||||| | | |||| | |||| |||| |||||||||||||| | |||||||||| |||| |||||    
T  48252944 tggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttc 48253020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 35315326 - 35315215
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtccttt 490  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||| |||| | | |||||||||| |||| |||||||||||||||  |||| ||||| |    
T  35315326 ggtcccttaacttattttattttctcagtttgatcccttaattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgttttagtcctct 35315227  T
Q  491 ctgttagttttt 502  Q
    ||||||||||||    
T  35315226 ctgttagttttt 35315215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 494
Target Start/End: Original strand, 4167445 - 4167566
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||| |   | ||| ||||||||||||||||| ||||||| ||||||||||||| |||||| | |||||| |||||||| ||||||||    
T  4167445 aggcttaatacatcctcc---gatcccttaacttattttattttctcagtttaatcccttaactattaagtgtgtcaatttgatcctataagtcttctgt 4167541  T
Q  470 cgtttaccattttggtcctttctgt 494  Q
    |||||||  |||| ||| |||||||    
T  4167542 cgtttactgttttagtcatttctgt 4167566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 24873695 - 24873590
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | |||||| |||||| || |||||||||||||| | |||||||||| |||| ||||||| ||||||||||||||||| |||| |||     
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgttt 24873596  T
Q  497 gttttt 502  Q
    ||||||    
T  24873595 gttttt 24873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 370 - 501
Target Start/End: Original strand, 46457064 - 46457192
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||| | ||||||||||||   |||||| |||||||||||||||||||||||| | |||||||||| |||||||||||      
T  46457064 aggcttaatacatcgtt---tggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatcttcttc 46457160  T
Q  470 cgtttaccattttggtcctttctgttagtttt 501  Q
    | ||||||||||||||| | |||||| |||||    
T  46457161 catttaccattttggtcatgtctgtttgtttt 46457192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 19279717 - 19279609
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||| || |||||||||| ||||||||||||    
T  19279717 tggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtcctt 19279618  T
Q  490 tctgttagt 498  Q
    || ||||||    
T  19279617 tccgttagt 19279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 43930330 - 43930442
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||| ||||||| ||  || | ||||||||||||||||||||||||||||||| |||||||||||     
T  43930330 tggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtcctc 43930429  T
Q  490 tctgttagttttt 502  Q
    ||||||| |||||    
T  43930430 tctgttaattttt 43930442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 10257489 - 10257385
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||| |||||| | |||||||||| |||| |||  |||||||||| ||||| ||| ||||    
T  10257489 gtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactct--tgtcgtttactattttagtcatttc 10257392  T
Q  492 tgttagt 498  Q
    |||||||    
T  10257391 tgttagt 10257385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 390 - 485
Target Start/End: Original strand, 45719626 - 45719721
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggt 485  Q
    ||||||||||| |||||||   |||||||||||||||| |||||||||||||| | |||||||||  |||| |||||||| |||||||||||||||    
T  45719626 tggtcctttaatttatttttgattttcagtttgatcccctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggt 45719721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 412 - 502
Target Start/End: Complemental strand, 46458796 - 46458706
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||| ||||||||||||||||||| | |||||||||| |||||||||||  ||||||||||||||||||| || ||| ||||||    
T  46458796 ttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtttgttttt 46458706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 371 - 486
Target Start/End: Original strand, 22744741 - 22744853
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| |||  |||| |||||||||||||||| |||||||||||||||||||| || |    
T  22744741 ggcttaatacatcatt---tggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgcc 22744837  T
Q  471 gtttaccattttggtc 486  Q
    |||||| |||||||||    
T  22744838 gtttactattttggtc 22744853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 4858449 - 4858337
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| ||||||||| |||||||||| ||| | |||||||||| ||||||||||||| |||||| |||||  ||||     
T  4858449 tggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttactattttaatcctc 4858350  T
Q  490 tctgttagttttt 502  Q
    ||| |||||||||    
T  4858349 tctattagttttt 4858337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 498
Target Start/End: Complemental strand, 22746425 - 22746317
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    ||||||||||||||||||| | |||||| |||  |||| |||||||||||||| | |||||||||| ||||||||| || ||||||| |||||| ||||     
T  22746425 tggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttgatcctc 22746326  T
Q  490 tctgttagt 498  Q
    || ||||||    
T  22746325 tccgttagt 22746317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 370 - 488
Target Start/End: Complemental strand, 46675056 - 46674941
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   || ||| ||||||||||||   |||||| |||||||||||||||||||||||| |  ||||||||| ||||||||| ||     
T  46675056 aggcttaatacatcatt---tgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgc 46674960  T
Q  470 cgtttaccattttggtcct 488  Q
    ||||||| |||||||||||    
T  46674959 cgtttactattttggtcct 46674941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 14206706 - 14206796
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||| || | |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||| || | || ||||||||||    
T  14206706 ttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttt 14206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 14215396 - 14215486
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||| || | |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||| || | || ||||||||||    
T  14215396 ttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttt 14215486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 502
Target Start/End: Complemental strand, 27899317 - 27899207
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| ||||||||||||||||| | |||||| ||| ||||||||||| | | | |||||| ||| ||||||||| |||||||||| ||||||||| | ||    
T  27899317 gtcccttaacttattttattttcttagtttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtcttatc 27899218  T
Q  492 tgttagttttt 502  Q
     ||||||||||    
T  27899217 cgttagttttt 27899207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 4168947 - 4168890
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  4168947 ttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtc 4168890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 14107827 - 14107955
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   ||||| |||||||||||||   |||||| |||| ||||||||||||||||||| | ||  ||||||  || ||||||||||    
T  14107827 ggcttaatacatcatt---tggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtc 14107923  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    ||| ||| |||||||||| || ||||||||||    
T  14107924 gttcaccgttttggtcctctccgttagttttt 14107955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 502
Target Start/End: Original strand, 14417784 - 14417912
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   ||||| |||||||||||||   |||||| |||| ||||||||||||||||||| | ||  ||||||  || ||||||||||    
T  14417784 ggcttaatacatcatt---tggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtc 14417880  T
Q  471 gtttaccattttggtcctttctgttagttttt 502  Q
    ||| ||| |||||||||| || ||||||||||    
T  14417881 gttcaccgttttggtcctctccgttagttttt 14417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 486
Target Start/End: Original strand, 25153653 - 25153765
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||||||| |||||||||||  |    
T  25153653 ggcttaatacatcatt---tggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttcc 25153749  T
Q  471 gtttaccattttggtc 486  Q
    ||||||| ||||||||    
T  25153750 gtttaccgttttggtc 25153765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 454
Target Start/End: Complemental strand, 29345180 - 29345119
Alignment:
Q  393 tcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    |||||||| |||||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  29345180 tcctttaatttattttaatttttcagtttgatcccttaactattaaatgttttaatttggtc 29345119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 454
Target Start/End: Original strand, 29408257 - 29408321
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| || ||||||    
T  29408257 tggtcctttaatttattttattttctcagtttgatcccttaactataaaatgtttcaaattggtc 29408321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 40926622 - 40926526
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| ||||||||||||   |||||| |||| |||| |||||||||||||| | ||||||||||||||||| ||||  |||||||| ||||||||||    
T  40926622 gtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccgtttaccgttttggtcct 40926526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 43936245 - 43936133
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| |||| |||  |||||||||||| | |||||||||||  |||| ||||||||||||||| |||||||||||     
T  43936245 tggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcctc 43936146  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  43936145 tccgttagttttt 43936133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 488
Target Start/End: Original strand, 19278348 - 19278462
Alignment:
Q  371 ggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtc 470  Q
    ||||||||||||| ||   |||||| ||||||||||||    ||||| |||| |||||||| |||||||||| | |||||||||| |||| ||||||| |    
T  19278348 ggcttaatacatcatt---tggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgcc 19278444  T
Q  471 gtttaccattttggtcct 488  Q
    |||||| |||||||||||    
T  19278445 gtttactattttggtcct 19278462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 419 - 502
Target Start/End: Original strand, 48754036 - 48754119
Alignment:
Q  419 tttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||| |||| ||| |||||||||||| ||||| |||||||||||||| |||||||||||||||| ||||| || ||||| ||||    
T  48754036 tttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgttagatttt 48754119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 466
Target Start/End: Complemental strand, 132121 - 132028
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||||||||||||||    ||||| ||||||||||||||||| |||||||| |||||||||||| |||||| |  ||||||||| |||| |||||    
T  132121 aggcttaatacatcctta---ggtcccttaacttattttattttctcagtttggtcccttaactattaagtgtgtcgatttggtcccataagtcttc 132028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 488
Target Start/End: Original strand, 7146799 - 7146888
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    ||||||||||| | |||||| |||| |||| |||||||||||||||| ||||||||||| |||||||| |||| |||||  ||||||||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtcct-taaatcttatgtcatttactgttttggtcct 7146888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 35483591 - 35483649
Alignment:
Q  397 ttaacttattttatttt-ttcagtttgatcccttaactataaagtgttttaatttggtc 454  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  35483591 ttaacttattttatttttttcagtttggtcccttaactataaagtgtttcaatttggtc 35483649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 40930451 - 40930541
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||| |||| |||| |||||||||||||||| |||||||||| ||||||||| ||  ||||||| |||| ||||| ||| |||||||||    
T  40930451 ttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtttaccgttttagtcctctctattagttttt 40930541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 18802494 - 18802402
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccatttt 482  Q
    |||||| |||||||||||| | |||||| ||||||||| |||||||||||||| | ||||| |||| |||||| |||| ||||| || |||||    
T  18802494 tggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttctatcgttcactatttt 18802402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 38406029 - 38406141
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    ||||||||||| |||||||   |||||| |||| |||| |||||||||||||| | ||  |||| | |||||||||||| |||||||  |||||||||||    
T  38406029 tggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtcctt 38406128  T
Q  490 tctgttagttttt 502  Q
    || |||| |||||    
T  38406129 tccgttaattttt 38406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 492
Target Start/End: Original strand, 10256141 - 10256236
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttct 492  Q
    ||||||||||||||||| |||||||| |||||||||||| |||||| | ||  |||||  |||| |||||| |||||||  ||||||||| |||||    
T  10256141 ttaacttattttattttctcagtttggtcccttaactattaagtgtctcaaaatggtctcataactcttctatcgtttagtattttggtcatttct 10256236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 438
Target Start/End: Complemental strand, 29409338 - 29409295
Alignment:
Q  395 ctttaacttattttattttttcagtttgatcccttaactataaa 438  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  29409338 ctttaacttattttattttctcagtttgatcccttaactataaa 29409295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 7148161 - 7148055
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttc 491  Q
    |||| |||||||||||| | |||||| |||| ||   |||||||||||||||| ||||||||||  |||||||| ||||||||||  ||||||| || ||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggttctctc 7148062  T
Q  492 tgttagt 498  Q
     ||||||    
T  7148061 cgttagt 7148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 482
Target Start/End: Complemental strand, 7347282 - 7347233
Alignment:
Q  433 tataaagtgttttaatttggtcctataaatcttctgtcgtttaccatttt 482  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  7347282 tataaagtgtctcaatttggtcctataaatcttatgtcgtttaccatttt 7347233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 29344176 - 29344241
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| ||||||||| ||||||||||| ||  ||||||||||||||||    
T  29344176 ggtcccttaacttattttaatttctcagtttgaccccttaactattaaacgttttaatttggtcct 29344241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 468
Target Start/End: Complemental strand, 35484414 - 35484337
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctg 468  Q
    ||||| ||||||||||||||||  |||||||| ||| ||||||||||||| ||| ||||| |||| |||| |||||||    
T  35484414 ggtcccttaacttattttatttcctcagtttggtcctttaactataaagtatttcaatttagtcccataactcttctg 35484337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 41516442 - 41516337
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||||| | |||| | |||| |||| |||||||||||||| |||||||||||| |||| | ||||  ||||||  | | ||||| |||||||||    
T  41516442 ttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataagtattcttccgtttagtaatgtggtcatttctgtta 41516343  T
Q  497 gttttt 502  Q
    ||||||    
T  41516342 gttttt 41516337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 429 - 502
Target Start/End: Original strand, 47163203 - 47163276
Alignment:
Q  429 taactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagttttt 502  Q
    |||||||||||||  |||||||||||| ||||||||| |  ||||||| ||||||||||| || ||||||||||    
T  47163203 taactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgttagttttt 47163276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 25155041 - 25154945
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||   |||||| |||||||||||||||||||||||| | |||||  ||  |||||||||||   ||||| ||||||||||    
T  25155041 tggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttggtc 25154945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 43007754 - 43007662
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccatttt 482  Q
    |||||||| ||||||||||   |||||| |||| |||  |||||||||||||| | |||||||||| |||| |||| |||||||||| |||||    
T  43007754 tggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttactatttt 43007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 13446780 - 13446651
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||  ||||||||||||   |||||| |||| | | | ||||||| ||||| | |||||||||| ||||||||||||     
T  13446780 aggcttaatacatcatt---tggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgc 13446684  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||  || |||||||| || ||||||||||    
T  13446683 cgtttattatattggtcctctccgttagttttt 13446651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 482
Target Start/End: Complemental strand, 22061898 - 22061808
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccatttt 482  Q
    |||| |||||||||||| | |||||| |||| |||| ||||||||||  || | |||||||||| ||||||||| || ||||||| |||||    
T  22061898 gtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactatttt 22061808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 488
Target Start/End: Complemental strand, 35128240 - 35128198
Alignment:
Q  446 aatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  35128240 aatttggtcctataaatcttatgtcgtttactattttggtcct 35128198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 4857219 - 4857324
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    ||||||||||||   |||||| |||| |||| |||||||||| ||| |  ||||||||| | |||||||||| |||||||  |||| ||||| || ||||    
T  4857219 ttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctccgtta 4857318  T
Q  497 gttttt 502  Q
    ||||||    
T  4857319 gttttt 4857324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 27897710 - 27897775
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaat 462  Q
    ||||||||||||||||| | | |||||| |||||| |||||| ||||| |||||||||| ||||||    
T  27897710 ttaacttattttattttcttaatttgattccttaattataaaatgtttcaatttggtcccataaat 27897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 47537144 - 47537079
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| |||||||||||||  || |||||||| |||||||||||| || ||||| |||||||||||    
T  47537144 ggtcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtcct 47537079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 502
Target Start/End: Complemental strand, 13287087 - 13286987
Alignment:
Q  402 ttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttagtttt 501  Q
    |||||||| ||| ||  ||||||||||||||||| |||||||| ||||||||||  ||  |||| ||  |||||| ||||||||||| |  |||||||||    
T  13287087 ttattttaatttctctatttgatcccttaactattaagtgtttcaatttggtcccttatgtcttatgctgtttactattttggtcctcttcgttagtttt 13286988  T
Q  502 t 502  Q
    |    
T  13286987 t 13286987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 466
Target Start/End: Complemental strand, 17288325 - 17288249
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttc 466  Q
    |||||| |||||||||||| | |||| | |||| |||| |||||||||||||| | |||||||||| |||| |||||    
T  17288325 tggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttc 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 19848939 - 19848867
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaat 462  Q
    |||||| ||||||||||||    ||||| |||| ||||||||||||||||||| | |||||||||| ||||||    
T  19848939 tggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 500
Target Start/End: Original strand, 33458304 - 33458430
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||||||||||||||||   |||||| |||| ||| ||||||||||||||| | || || |||| |||| ||||||      
T  33458304 aggcttaatacatcatt---tggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttc 33458399  T
Q  470 cgtttaccattttggtcctttctgttagttt 500  Q
    ||||||| | | ||||||| || ||||||||    
T  33458400 cgtttactaatgtggtcctctccgttagttt 33458430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 502
Target Start/End: Complemental strand, 33459640 - 33459536
Alignment:
Q  398 taacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctttctgttag 497  Q
    |||||||||||   |||||| |||| |||  |||||||||||||| | |||||||||| |||| |||||   ||||||| | | ||||| ||||||||||    
T  33459640 taacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtggtcttttctgttag 33459541  T
Q  498 ttttt 502  Q
    |||||    
T  33459540 ttttt 33459536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 43935196 - 43935288
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccatttt 482  Q
    |||||| ||||||||||||    ||||| |||| |||  |||||||||||||| | |||||||||  |||||||||||| ||||||| |||||    
T  43935196 tggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 46673523 - 46673598
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||| |||| |||| |||| ||||||||||| |||||||||| ||||||||| || ||||||| || ||||||||    
T  46673523 ttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtcct 46673598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 462
Target Start/End: Original strand, 18801209 - 18801298
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaat 462  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | |||||||||| ||||||    
T  18801209 aggcttaatacatgctt---tggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 18801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 496
Target Start/End: Complemental strand, 36702999 - 36702949
Alignment:
Q  446 aatttggtcctataaatcttctgtcgtttaccattttggtcctttctgtta 496  Q
    |||||||||| |||||| ||||| ||||||| |||||||||||||| ||||    
T  36702999 aatttggtcccataaatattctgccgtttactattttggtcctttccgtta 36702949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 43006379 - 43006492
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| ||||||| |||||| | ||||||||||  ||| |||| ||     
T  43006379 aggcttaatacatcatt---tggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgc 43006475  T
Q  470 cgtttaccattttggtc 486  Q
    ||||| | |||||||||    
T  43006476 cgtttgctattttggtc 43006492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 465
Target Start/End: Original strand, 25532140 - 25532231
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatctt 465  Q
    |||||||||||||| ||   || |||||||||||||||| || ||||| |||| |||| ||||||||||||||||  |||| |||  |||||||||    
T  25532140 aggcttaatacatcatt---tgatcctttaacttatttt-ttgtttcaatttggtcccctaactataaagtgtttcgatttagtctcataaatctt 25532231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 40881103 - 40881168
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| ||||| || |||||||||||| ||  |||| |||||||||||    
T  40881103 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 40881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 473
Target Start/End: Original strand, 41126233 - 41126333
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| |||||||||||||| | ||||||||||  ||  ||||||||    
T  41126233 aggcttaatacatgctt---tggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgt 41126329  T
Q  470 cgtt 473  Q
    ||||    
T  41126330 cgtt 41126333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 462
Target Start/End: Original strand, 1970860 - 1970896
Alignment:
Q  426 ccttaactataaagtgttttaatttggtcctataaat 462  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  1970860 ccttaactataaagtgtttcaatttggtcccataaat 1970896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 750 - 621
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| |||||||||||| | || ||| |||| |||| |||||||||||||| | ||||| |||| ||||||||||||     
T  750 aggcttaatacatcatt---tggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgc 654  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||||||| | || ||||||||||    
T  653 cgtttaccattttggtcatctccgttagttttt 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 524 - 653
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| |||||||||||| | || ||| |||| |||| |||||||||||||| | ||||| |||| ||||||||||||     
T  524 aggcttaatacatcatt---tggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgc 620  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||||||| | || ||||||||||    
T  621 cgtttaccattttggtcatctccgttagttttt 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 9600 - 9471
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| |||||||||||| | || ||| |||| |||| |||||||||||||| | ||||| |||| ||||||||||||     
T  9600 aggcttaatacatcatt---tggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgc 9504  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||||||||||||| | || ||||||||||    
T  9503 cgtttaccattttggtcatctccgttagttttt 9471  T

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Target: scaffold0290; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 8390 - 8502
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||   |||||| |||| |||| |||||||||| ||| | || ||||||| |||||||||| ||| ||||| |||| |||| |     
T  8390 tggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatttactatttcggtcatc 8489  T
Q  490 tctgttagttttt 502  Q
    || ||||||||||    
T  8490 tccgttagttttt 8502  T

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Target: scaffold0122 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 391 - 488
Target Start/End: Complemental strand, 17264 - 17167
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||  ||| |||| ||||||||| ||||| ||||| |||||    
T  17264 ggtcctttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttaatccaataactcttctgtcatttactattttagtcct 17167  T

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Target: scaffold0122; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 502
Target Start/End: Original strand, 15944 - 16068
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||||| |   ||||| ||||||||||||||||||||| |||| ||||||| ||||||||| ||| ||     ||| ||||| ||| ||     
T  15944 aggcttaatacatcctcc---ggtcccttaacttattttattttttcactttggtcccttagctataaagtatttcaa-----tcccataaaccttatgc 16035  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
    ||||||| ||||| ||||| || ||||||||||    
T  16036 cgtttactattttagtcctctccgttagttttt 16068  T

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Target: scaffold0178 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 502
Target Start/End: Complemental strand, 2387 - 2258
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||   |||||| |||| |||| ||| |||||||||||| |||||||||| |||| ||||||      
T  2387 aggcttaatacatgctt---tggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctac 2291  T
Q  470 cgtttaccattttggtcctttctgttagttttt 502  Q
     |||||| |||||||||||||| ||||||||||    
T  2290 tgtttactattttggtcctttccgttagttttt 2258  T

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Target: scaffold0013 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 96154 - 96267
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   |||||| ||||||||||||   |||||| |||| |||| |||||||||||||| | |||||| ||| |||||||||||      
T  96154 aggcttaatacatcatt---tggtccattaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttc 96250  T
Q  470 cgtttaccattttggtc 486  Q
    |||||||||||||||||    
T  96251 cgtttaccattttggtc 96267  T

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Target: scaffold0025 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Complemental strand, 56805 - 56693
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| |||||||||||| |  ||||| |||| |||| ||| |||||||||| | ||||||||||||||||||||||| |||||||  ||| | ||||     
T  56805 tggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttactgtttagatcctc 56706  T
Q  490 tctgttagttttt 502  Q
    ||| |||||||||    
T  56705 tctattagttttt 56693  T

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Target: scaffold0003 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 47081 - 47193
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcctt 489  Q
    |||||| ||||||||||||    ||||| ||||||||||||||| |||| ||| | |||||||||| |||||||||||  ||||||| |||||||||||     
T  47081 tggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctc 47180  T
Q  490 tctgttagttttt 502  Q
    || |||| |||||    
T  47181 tccgttaattttt 47193  T

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Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 486
Target Start/End: Complemental strand, 48561 - 48465
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||||||||    ||||| |||| ||| ||||||||||||||| | |||||| ||| |||||| ||||| |||||||  ||||||||    
T  48561 tggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtc 48465  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 486
Target Start/End: Complemental strand, 145952 - 145878
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||| ||||| |||||||||| ||| |||||||||||| ||||||||| || ||||||| |||||||||    
T  145952 ttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgtttactattttggtc 145878  T

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Target: scaffold2127 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 498
Target Start/End: Complemental strand, 637 - 512
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    |||||||||||||| ||   || ||| ||||||||||||   |||||| || | |||| |||||||||||||| | ||||||||   ||||||||| ||     
T  637 aggcttaatacatcatt---tgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgc 541  T
Q  470 cgtttaccattttggtcctttctgttagt 498  Q
    ||||||| ||||||||||| || ||||||    
T  540 cgtttactattttggtcctctccgttagt 512  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 455
Target Start/End: Original strand, 11717 - 11782
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    |||||| |||||||||||| | ||||||||||  |||| ||| |||||||||||| ||||||||||    
T  11717 tggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcc 11782  T

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Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 467
Target Start/End: Original strand, 23417 - 23494
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttct 467  Q
    |||||| ||||||||||||   ||||||||||| |||| |||||||||| ||| | |||||||||| |||| ||||||    
T  23417 tggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 23494  T

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Target: scaffold0046; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 455
Target Start/End: Complemental strand, 24937 - 24855
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcc 455  Q
    |||||||||||||| ||   |||||| |||| |||||||   ||||||||||| |||| ||| |||||||||||| ||||||||||    
T  24937 aggcttaatacatcgtt---tggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtcc 24855  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 486
Target Start/End: Complemental strand, 77279 - 77190
Alignment:
Q  397 ttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||||||||| | |||||| |||| || | ||||||||||| |||| |||||||||| |||||| ||||  |||||||  ||||||||    
T  77279 ttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtc 77190  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 4321 - 4225
Alignment:
Q  392 gtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtcct 488  Q
    |||| ||||||||||||||||| | |||||  |||||||| ||| |||||| | |||||| ||  |||| || |||| |||||||||||||| ||||    
T  4321 gtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcct 4225  T

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Target: scaffold0096 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 5110 - 5067
Alignment:
Q  390 tggtcctttaacttattttattttttcagtttgatcccttaact 433  Q
    |||||| |||||||||||| || |||||||||||||||||||||    
T  5110 tggtcccttaacttatttttttgtttcagtttgatcccttaact 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 22161 - 22234
Alignment:
Q  412 ttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgtcgtttaccattttggtc 486  Q
    |||||| ||||||| || ||||||||| ||| | |||||| ||  |||||||||||||||||||| |||||||||    
T  22161 ttttcactttgatctct-aactataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttggtc 22234  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 85180 - 85115
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| ||||| || |||||||||||| ||  |||| |||||||||||    
T  85180 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 85115  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 205656 - 205591
Alignment:
Q  391 ggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcct 456  Q
    ||||| ||||||||||||| ||| |||||||| |||||||| ||| ||  |||| |||||||||||    
T  205656 ggtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtcct 205591  T

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Target: scaffold0177 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 500
Target Start/End: Original strand, 1749 - 1876
Alignment:
Q  370 aggcttaatacatccttctctggtcctttaacttattttattttttcagtttgatcccttaactataaagtgttttaatttggtcctataaatcttctgt 469  Q
    ||||||||||||| |||   |||||| ||||||||||||    ||||| |||| |||| ||| |||||||||| | ||||||||||  ||  ||||||||    
T  1749 aggcttaatacatgctt---tggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgt 1845  T
Q  470 cgtttaccattttggtcctttctgttagttt 500  Q
    ||||  |  |||||||||| || ||||||||    
T  1846 cgttacctcttttggtcctctccgttagttt 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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