View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3114_low_44 (Length: 336)
Name: NF3114_low_44
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3114_low_44 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 332
Target Start/End: Original strand, 38253218 - 38253529
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38253218 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
38253317 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38253318 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca--gt |
38253415 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38253416 |
gtgtgtgtatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
38253515 |
T |
|
| Q |
319 |
gctctctgctcctc |
332 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
38253516 |
gctctcttctcctc |
38253529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 19 - 332
Target Start/End: Complemental strand, 43156324 - 43156013
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
43156324 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaattaaactctccaagatccttcatgttttgccttt |
43156225 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43156224 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca--gt |
43156127 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43156126 |
gtgtgtgtatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
43156027 |
T |
|
| Q |
319 |
gctctctgctcctc |
332 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
43156026 |
gctctcttctcctc |
43156013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 332
Target Start/End: Complemental strand, 11473648 - 11473337
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11473648 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
11473549 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11473548 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca--gt |
11473451 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11473450 |
gtgtgtgtatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
11473351 |
T |
|
| Q |
319 |
gctctctgctcctc |
332 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
11473350 |
gctctcttctcctc |
11473337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 28246388 - 28246583
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28246388 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactcttcaagatccttcatgttttgccttt |
28246487 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28246488 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca |
28246583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 330
Target Start/End: Original strand, 10465652 - 10465961
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| | || |
|
|
| T |
10465652 |
acaaagtatgccaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcgtatta |
10465751 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
|| |||||||||||||| |||||||||| |||||||||||| |||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| | |
|
|
| T |
10465752 |
gtaatgacatattcacatagagagtcagtttcatgtctaataggtatagacaaagccaagaataacttaaactcgttttgaaacaactcaaatata--gt |
10465849 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
318 |
Q |
| |
|
|| | ||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||| ||| ||||||| |
|
|
| T |
10465850 |
gtgtgtgtatatctttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttctttt |
10465949 |
T |
|
| Q |
319 |
gctctctgctcc |
330 |
Q |
| |
|
|||||| |||| |
|
|
| T |
10465950 |
tctctcttctcc |
10465961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 330
Target Start/End: Original strand, 43735304 - 43735613
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| | || |
|
|
| T |
43735304 |
acaaagtatgccaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcgtatta |
43735403 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
|| |||||||||||||| |||||||||| |||||||||||| |||| ||| |||| ||||||||||||||||| | ||||||||| ||||||| | |
|
|
| T |
43735404 |
gtaatgacatattcacatagagagtcagtttcatgtctaataggtatagacaaagccaagaataacttaaactcgttttgaaacaactcaaatata--gt |
43735501 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
318 |
Q |
| |
|
|| | ||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||| ||| ||||||| |
|
|
| T |
43735502 |
gtgtgtgtatatctttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttctttt |
43735601 |
T |
|
| Q |
319 |
gctctctgctcc |
330 |
Q |
| |
|
|||||| |||| |
|
|
| T |
43735602 |
tctctcttctcc |
43735613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 7282234 - 7282427
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| | || |
|
|
| T |
7282234 |
acaaagtatgccaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcgtatta |
7282333 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaata |
212 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||| |||||||| |||| ||||||||||||||||| | ||||||||| ||||||| |
|
|
| T |
7282334 |
gtgatgacatattcacatagagagtcagtttcatgtctaataggtacagacaaagccaagaataacttaaactcgttttgaaacaactcaaata |
7282427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 28246616 - 28246721
Alignment:
| Q |
227 |
atgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctg |
326 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28246616 |
atgtttttcccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctt |
28246715 |
T |
|
| Q |
327 |
ctcctc |
332 |
Q |
| |
|
|||||| |
|
|
| T |
28246716 |
ctcctc |
28246721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 7282465 - 7282563
Alignment:
| Q |
232 |
tttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctgctcc |
330 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||| ||| ||||||| |||||| |||| |
|
|
| T |
7282465 |
tttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttctttttctctcttctcc |
7282563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 19 - 332
Target Start/End: Complemental strand, 25381761 - 25381448
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25381761 |
acaaagtatgccaaaagtatcaaattttctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgcctta |
25381662 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25381661 |
gtgatgacatattcacaaagagagtcagattcatgtctaactggtacatataaagttaagaataacttaaactcatcttgaaacaattcaaatacagtgt |
25381562 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
318 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25381561 |
gtgtgtgtatgtttttcccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattctttt |
25381462 |
T |
|
| Q |
319 |
gctctctgctcctc |
332 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
25381461 |
gctctcttctcctc |
25381448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 245; Significance: 1e-136; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 332
Target Start/End: Original strand, 10124408 - 10124718
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10124408 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacagttaaatgaaactctccaagatcattcatgttttgccttt |
10124507 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10124508 |
gtgatga-atattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca--gt |
10124604 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattctttt |
318 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10124605 |
gtgtgtgtatgtttttcccatttggattagtattggtgcagtttcatatgctatccttgcaagcttatgggaggattcatacacacaactcaattctttt |
10124704 |
T |
|
| Q |
319 |
gctctctgctcctc |
332 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
10124705 |
gctctcttctcctc |
10124718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 19308080 - 19308275
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19308080 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgcctta |
19308179 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca |
214 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19308180 |
gtgatgacataatcacaaagagagtcaaattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaataca |
19308275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 322
Target Start/End: Original strand, 19308302 - 19308397
Alignment:
| Q |
227 |
atgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctc |
322 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19308302 |
atgtttttcccatttggattagtattggtgcagtttcatatgctaaccttgcaagcttatgtgaggattcatacacacaactcaattcttttgctc |
19308397 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 5910916 - 5910723
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
||||||||||||||| || ||| | ||| ||||||||||||| || ||| |||||||||| |||||||| ||||| |||||||||||||||| || |
|
|
| T |
5910916 |
acaaagtatgccaaatgtttcatacttcttacaactacaagtaattgaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcttatta |
5910817 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaata |
212 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||| |||||||| |||| ||||||||||||||||| | ||||||||| ||||||| |
|
|
| T |
5910816 |
gtgatgacatattcacatagagagtcagtttcatgtctaatgggtacagacaaagccaagaataacttaaactcgttttgaaacaactcaaata |
5910723 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 5910673 - 5910575
Alignment:
| Q |
232 |
tttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcatacacacaactcaattcttttgctctctgctcc |
330 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||| ||| ||||||| |||||| |||| |
|
|
| T |
5910673 |
tttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcataatcacatttcagttctttttctctcttctcc |
5910575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 299
Target Start/End: Complemental strand, 25862354 - 25862078
Alignment:
| Q |
19 |
acaaagtatgccaaaagtatcaaatttcctacaactacaagtgatggaatttgaaacacggttaaatgaaactctccaagatccttcatgttttgccttt |
118 |
Q |
| |
|
|||||||||| |||| |||||| | ||| ||||||||||||| |||||| |||||||||| |||||||| ||||| |||||||||||||||| || |
|
|
| T |
25862354 |
acaaagtatggcaaatgtatcatacttcttacaactacaagtaatggaagttgaaacacgattaaatgacactctaaaagatccttcatgtttcttatta |
25862255 |
T |
|
| Q |
119 |
gtgatgacatattcacaaagagagtcagattcatgtctaattggtacagataaagttaagaataacttaaactcatcttgaaacaattcaaatacannnn |
218 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||||||| |||||||| |||| ||||||||||| |||| | ||||||||| ||||||| | |
|
|
| T |
25862254 |
gtgatgacatattcacatagagagtcagtttcatgtctaataggtacagacaaagccaagaataactt--actcgttttgaaacaactcaaatata--gt |
25862159 |
T |
|
| Q |
219 |
nnnnnnnnatgtttttcccatttgaattagtattggtgcagtttcatatgctaaccttgcaagcttatgggaggattcata |
299 |
Q |
| |
|
|| | ||||||||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||| |
|
|
| T |
25862158 |
atgtgtgtatatctttcccatttggattagtaatggtgaagtttcatacactaaccttgcaagcttatgtgaggactcata |
25862078 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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