View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3114_low_58 (Length: 296)
Name: NF3114_low_58
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3114_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 282
Target Start/End: Original strand, 43428707 - 43428973
Alignment:
| Q |
17 |
gaatattttaaattgaatatgaaatggcgtagctgacacatattagaattagggtaaagaatagtttttt-aaaatttgttatttgaagttgttagggag |
115 |
Q |
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| T |
43428707 |
gaatattttaaattgaatatgaaatggcgtagctgacacatattagaattagggtaaagaatagtttgttcaaaatttgttatttgaagttgttagggag |
43428806 |
T |
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| Q |
116 |
agctggtgtatgtttgaagcatggtggatttgatgaaatcacgattttgttgaatctcccttgtagcttttgcaaaat--cagtgactcactgtaattct |
213 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
43428807 |
agctggtgtatgtttgaagcacggtggatttgatgaaatcacgattttgttgaatctcccttgtagcttttgcaaaatcacagtgactcactgtaattct |
43428906 |
T |
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| Q |
214 |
gtcaaactgactgtgctaaattttgtagataatccattaaaacatcctgtcctttatgaaatctctgtg |
282 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43428907 |
gtcaaactgac--tgctaaattttgtagataatccattaaaacatcctgtcctttatgaaatctctgtg |
43428973 |
T |
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