View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3114_low_70 (Length: 264)
Name: NF3114_low_70
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3114_low_70 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 33048598 - 33048851
Alignment:
| Q |
1 |
ttctccaaagaagtggatttttattcccatcaaagcaactaaactgaaaatcatgcttggtgaacaaacctctctccaggagatcttcttacgctgagac |
100 |
Q |
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| T |
33048598 |
ttctccaaagaagtgggtttttattcccatcaaagcaactaaactgaaaatcatgcttggtgaacaaacctctctccaggagatcttcttacgctgagac |
33048697 |
T |
|
| Q |
101 |
tgctcagactagtacttagggctcgtggtttagttgattatttttgtttggttaaaattgattggcgtttagacctatgcagtaatcctctaggttggcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
33048698 |
tgctcagactagtacttagggctcgtggtttagttgattatttttgtttggttaaaattgattggcatttagacctatgcagtaatcctctaggttggcc |
33048797 |
T |
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| Q |
201 |
tacgctggcatccccatgccattggtgccatcacaatcagtaatgatgatgatg |
254 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
33048798 |
tacgctggcatccccatgccattggcgccatcacaatcagtaatgatgatgatg |
33048851 |
T |
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