View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3114_low_72 (Length: 260)

Name: NF3114_low_72
Description: NF3114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3114_low_72
NF3114_low_72
[»] chr8 (5 HSPs)
chr8 (8-246)||(33048927-33049165)
chr8 (202-246)||(34201061-34201105)
chr8 (204-241)||(10441208-10441245)
chr8 (199-235)||(1586619-1586655)
chr8 (200-236)||(4298899-4298935)
[»] chr3 (6 HSPs)
chr3 (203-246)||(41319326-41319369)
chr3 (199-236)||(28576726-28576763)
chr3 (204-236)||(12704674-12704706)
chr3 (200-236)||(20503475-20503511)
chr3 (204-236)||(21110480-21110512)
chr3 (204-236)||(32166200-32166232)
[»] chr1 (5 HSPs)
chr1 (204-235)||(24701117-24701148)
chr1 (204-236)||(29230075-29230107)
chr1 (204-236)||(30847737-30847769)
chr1 (200-236)||(32461476-32461512)
chr1 (200-236)||(38078674-38078710)
[»] chr6 (7 HSPs)
chr6 (204-246)||(9024193-9024235)
chr6 (200-236)||(426527-426563)
chr6 (204-236)||(2493431-2493463)
chr6 (200-236)||(4118346-4118382)
chr6 (204-236)||(8148130-8148162)
chr6 (200-236)||(28715305-28715341)
chr6 (204-236)||(33076418-33076450)
[»] chr5 (8 HSPs)
chr5 (202-236)||(38749578-38749612)
chr5 (205-247)||(39750827-39750869)
chr5 (213-246)||(4344871-4344904)
chr5 (200-236)||(8420037-8420073)
chr5 (204-236)||(16881146-16881178)
chr5 (200-236)||(24906314-24906350)
chr5 (199-235)||(27253296-27253332)
chr5 (200-236)||(31084333-31084369)
[»] chr7 (2 HSPs)
chr7 (204-241)||(7241011-7241048)
chr7 (200-236)||(7438716-7438752)
[»] chr4 (9 HSPs)
chr4 (199-236)||(8457935-8457972)
chr4 (199-236)||(14465087-14465124)
chr4 (202-239)||(26276024-26276061)
chr4 (199-236)||(43093537-43093574)
chr4 (204-236)||(2976704-2976736)
chr4 (200-236)||(21945513-21945549)
chr4 (204-236)||(27096018-27096050)
chr4 (200-236)||(37203274-37203310)
chr4 (200-236)||(51701268-51701304)
[»] chr2 (1 HSPs)
chr2 (200-236)||(30335427-30335463)


Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 33048927 - 33049165
Alignment:
Q  8 ataaacacagttacaaagcggtcatgttgctatatgatgaatgaatcttcattaaacttttcaagtttttatataatattaatactaccatctttatcta 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33048927 ataaacacagttacaaagcggtcatgttgctatatgatgagtgaatcttcattaaacttttcaagtttttatataatattaatactaccatctttatcta 33049026  T
Q  108 tcaaaacatacgtagcactgacacttctaattctaagttctaatcgaactggtgttcagtgtccaacacatgtgatatcaacatatgtattatgtaatta 207  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33049027 tcaaaacatacttagcactgacacttctaattctaagttctaatagaactcgtgttcagtgtccaacacatgtgacatcaacatatgtattatgtaatta 33049126  T
Q  208 cattcaattatgtcattttttcaaattatcattagtgtc 246  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  33049127 cattcaattatgtcattttttcaagttatcattagtgtc 33049165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 34201061 - 34201105
Alignment:
Q  202 taattacattcaattatgtcattttttcaaattatcattagtgtc 246  Q
    |||||||||| |||||||||||||| ||||||||| |||||||||    
T  34201061 taattacattgaattatgtcattttctcaaattattattagtgtc 34201105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 10441245 - 10441208
Alignment:
Q  204 attacattcaattatgtcattttttcaaattatcatta 241  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  10441245 attacattgaattatgtcattttctcaaattatcatta 10441208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 1586655 - 1586619
Alignment:
Q  199 atgtaattacattcaattatgtcattttttcaaatta 235  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  1586655 atgtgattacgttcaattatgtcattttttcaaatta 1586619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 4298899 - 4298935
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  4298899 tgtaattacattaaattatgtgattttttcaaattat 4298935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000006; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 246
Target Start/End: Original strand, 41319326 - 41319369
Alignment:
Q  203 aattacattcaattatgtcattttttcaaattatcattagtgtc 246  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||    
T  41319326 aattacattgaattatgtcattttttcaaattattattggtgtc 41319369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 28576763 - 28576726
Alignment:
Q  199 atgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  28576763 atgtaattacattcaattttgtcattttctcaaattat 28576726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 12704674 - 12704706
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    |||||||| ||||||||||||||||||||||||    
T  12704674 attacattgaattatgtcattttttcaaattat 12704706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 20503511 - 20503475
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20503511 tgtaattacactgaattatgtcattttttcaaattat 20503475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 21110480 - 21110512
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  21110480 attacattcaattatgtcattttctcaaattat 21110512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 32166200 - 32166232
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  32166200 attacattcaattatgtcattttctcaaattat 32166232  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000006; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 24701117 - 24701148
Alignment:
Q  204 attacattcaattatgtcattttttcaaatta 235  Q
    ||||||||||||||||||||||||||||||||    
T  24701117 attacattcaattatgtcattttttcaaatta 24701148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 29230107 - 29230075
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  29230107 attacattcaattatgtcattttctcaaattat 29230075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 30847737 - 30847769
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    |||||||| ||||||||||||||||||||||||    
T  30847737 attacattgaattatgtcattttttcaaattat 30847769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 32461476 - 32461512
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  32461476 tgtaattacattaaattatgtgattttttcaaattat 32461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 38078674 - 38078710
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  38078674 tgtaattacattgaattatgtgattttttcaaattat 38078710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 9024193 - 9024235
Alignment:
Q  204 attacattcaattatgtcattttttcaaattatcattagtgtc 246  Q
    |||||||| |||||||||||||| ||||||||||||| |||||    
T  9024193 attacattgaattatgtcattttctcaaattatcatttgtgtc 9024235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 426527 - 426563
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  426527 tgtaattacatttaattatgtgattttttcaaattat 426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 2493431 - 2493463
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  2493431 attacattcaattatgtcattttgtcaaattat 2493463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 4118346 - 4118382
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  4118346 tgtaattacatttaattatgtgattttttcaaattat 4118382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 8148162 - 8148130
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  8148162 attacattcaattatgtcattttctcaaattat 8148130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 28715341 - 28715305
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| | ||||||||||||||||||||||||    
T  28715341 tgtaattacactgaattatgtcattttttcaaattat 28715305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 33076450 - 33076418
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  33076450 attacattcaattatgtcattttctcaaattat 33076418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 38749578 - 38749612
Alignment:
Q  202 taattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  38749578 taattacattgaattatgtcattttttcaaattat 38749612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 247
Target Start/End: Complemental strand, 39750869 - 39750827
Alignment:
Q  205 ttacattcaattatgtcattttttcaaattatcattagtgtct 247  Q
    |||||||||||||  ||||| ||||||||||||||||||||||    
T  39750869 ttacattcaattacttcattatttcaaattatcattagtgtct 39750827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 4344904 - 4344871
Alignment:
Q  213 aattatgtcattttttcaaattatcattagtgtc 246  Q
    |||||||||||||||||||||||| |||||||||    
T  4344904 aattatgtcattttttcaaattattattagtgtc 4344871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 8420073 - 8420037
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  8420073 tgtaattacattgaattatgttattttttcaaattat 8420037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 16881178 - 16881146
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    |||||||| ||||||||||||||||||||||||    
T  16881178 attacattaaattatgtcattttttcaaattat 16881146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 24906314 - 24906350
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| | ||||||||||||||||||||||||    
T  24906314 tgtaattacactgaattatgtcattttttcaaattat 24906350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 27253332 - 27253296
Alignment:
Q  199 atgtaattacattcaattatgtcattttttcaaatta 235  Q
    |||| |||||||||||||||| |||||||||||||||    
T  27253332 atgtgattacattcaattatgacattttttcaaatta 27253296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 31084369 - 31084333
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  31084369 tgtaattacattgaattatgtgattttttcaaattat 31084333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 7241011 - 7241048
Alignment:
Q  204 attacattcaattatgtcattttttcaaattatcatta 241  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  7241011 attacattgaattatgtcattttttcaaatcatcatta 7241048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 7438752 - 7438716
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||||| |||||||| |||||||||||||||    
T  7438752 tgtaattacattgaattatgtgattttttcaaattat 7438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.00000009; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 8457972 - 8457935
Alignment:
Q  199 atgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8457972 atgtgattacattcaattatgtcattttctcaaattat 8457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 14465087 - 14465124
Alignment:
Q  199 atgtaattacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  14465087 atgtaattacattgaattatgtgattttttcaaattat 14465124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 26276024 - 26276061
Alignment:
Q  202 taattacattcaattatgtcattttttcaaattatcat 239  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  26276024 taattacattgaattatgtcattttctcaaattatcat 26276061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 43093537 - 43093574
Alignment:
Q  199 atgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  43093537 atgtgattacattcaattatgccattttttcaaattat 43093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 2976736 - 2976704
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  2976736 attacattcaattatgtcattttctcaaattat 2976704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 21945549 - 21945513
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| | ||||||||||||||||||||||||    
T  21945549 tgtaattacactgaattatgtcattttttcaaattat 21945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 27096018 - 27096050
Alignment:
Q  204 attacattcaattatgtcattttttcaaattat 236  Q
    ||||||||||||||||||||||| |||||||||    
T  27096018 attacattcaattatgtcattttgtcaaattat 27096050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 37203310 - 37203274
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| | ||||||||||||||||||||||||    
T  37203310 tgtaattacactaaattatgtcattttttcaaattat 37203274  T

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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 51701304 - 51701268
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| |||||||||| |||||||||||||||    
T  51701304 tgtaattacactcaattatgtaattttttcaaattat 51701268  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 30335463 - 30335427
Alignment:
Q  200 tgtaattacattcaattatgtcattttttcaaattat 236  Q
    |||||||||| | ||||||||||||||||||||||||    
T  30335463 tgtaattacactaaattatgtcattttttcaaattat 30335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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