View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3115R-Insertion-2 (Length: 730)

Name: NF3115R-Insertion-2
Description: NF3115R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3115R-Insertion-2
NF3115R-Insertion-2
[»] chr2 (27 HSPs)
chr2 (375-729)||(31587310-31587665)
chr2 (390-727)||(27110929-27111268)
chr2 (529-730)||(24317778-24317979)
chr2 (508-725)||(24317162-24317380)
chr2 (412-719)||(19198257-19198565)
chr2 (529-710)||(36398781-36398963)
chr2 (544-717)||(25347199-25347372)
chr2 (529-710)||(23758616-23758798)
chr2 (508-726)||(20649528-20649746)
chr2 (529-730)||(20475243-20475444)
chr2 (532-710)||(19466510-19466688)
chr2 (529-721)||(12952463-12952655)
chr2 (588-727)||(27107560-27107699)
chr2 (567-730)||(20476544-20476707)
chr2 (529-710)||(24790145-24790327)
chr2 (536-727)||(21250168-21250358)
chr2 (529-710)||(12910480-12910662)
chr2 (388-586)||(27106727-27106926)
chr2 (529-710)||(22610883-22611065)
chr2 (537-730)||(21530384-21530576)
chr2 (567-710)||(26860283-26860427)
chr2 (529-721)||(24283505-24283697)
chr2 (567-709)||(29566040-29566182)
chr2 (529-707)||(18765667-18765845)
chr2 (496-645)||(23801859-23802008)
chr2 (646-709)||(13314954-13315017)
chr2 (529-610)||(15328300-15328380)
[»] chr6 (45 HSPs)
chr6 (389-730)||(30424783-30425127)
chr6 (529-710)||(25805444-25805625)
chr6 (529-730)||(26965537-26965739)
chr6 (518-730)||(20764962-20765173)
chr6 (529-710)||(24501815-24501996)
chr6 (500-721)||(18152682-18152903)
chr6 (529-710)||(17864412-17864593)
chr6 (529-710)||(23882681-23882862)
chr6 (529-710)||(20470190-20470371)
chr6 (401-730)||(21323242-21323572)
chr6 (529-710)||(13195314-13195496)
chr6 (529-710)||(17855185-17855367)
chr6 (539-710)||(9281695-9281867)
chr6 (529-710)||(33665784-33665966)
chr6 (529-710)||(29254903-29255083)
chr6 (529-710)||(11960472-11960655)
chr6 (529-710)||(17527871-17528053)
chr6 (401-709)||(16309346-16309655)
chr6 (529-710)||(20989752-20989933)
chr6 (529-710)||(17234582-17234764)
chr6 (529-710)||(8465659-8465836)
chr6 (529-709)||(12444710-12444887)
chr6 (529-710)||(15897661-15897842)
chr6 (529-710)||(14258901-14259083)
chr6 (573-710)||(21723395-21723533)
chr6 (412-490)||(20137993-20138071)
chr6 (412-490)||(22194798-22194876)
chr6 (645-710)||(3567409-3567474)
chr6 (645-730)||(28623635-28623720)
chr6 (567-710)||(34657138-34657282)
chr6 (531-709)||(15003150-15003328)
chr6 (646-710)||(25964803-25964867)
chr6 (646-710)||(25969450-25969514)
chr6 (646-710)||(25973890-25973954)
chr6 (529-602)||(25782802-25782875)
chr6 (529-688)||(12039691-12039850)
chr6 (646-710)||(19171524-19171588)
chr6 (568-709)||(9384643-9384784)
chr6 (646-709)||(15038455-15038518)
chr6 (555-709)||(16137570-16137724)
chr6 (646-709)||(20003245-20003308)
chr6 (529-710)||(20558293-20558474)
chr6 (646-709)||(19216061-19216124)
chr6 (529-710)||(21706334-21706518)
chr6 (646-710)||(19100008-19100071)
[»] chr4 (37 HSPs)
chr4 (391-727)||(10198222-10198560)
chr4 (508-727)||(50907821-50908039)
chr4 (496-727)||(16655310-16655540)
chr4 (401-710)||(19659299-19659611)
chr4 (529-710)||(15700298-15700480)
chr4 (497-710)||(9068904-9069117)
chr4 (529-710)||(13399291-13399472)
chr4 (506-721)||(2679817-2680028)
chr4 (535-710)||(25116820-25116998)
chr4 (497-710)||(33745922-33746135)
chr4 (537-709)||(32861646-32861819)
chr4 (527-699)||(16383879-16384052)
chr4 (529-710)||(23400181-23400357)
chr4 (529-707)||(28019295-28019474)
chr4 (505-727)||(41785401-41785622)
chr4 (529-710)||(21478099-21478280)
chr4 (529-710)||(10724250-10724431)
chr4 (529-710)||(10938019-10938200)
chr4 (529-710)||(10190877-10191059)
chr4 (529-707)||(15162478-15162656)
chr4 (571-710)||(10722016-10722155)
chr4 (571-710)||(10935785-10935924)
chr4 (529-709)||(22554961-22555142)
chr4 (542-710)||(18618103-18618272)
chr4 (529-709)||(25354624-25354803)
chr4 (646-710)||(8163893-8163957)
chr4 (645-705)||(11905200-11905260)
chr4 (529-605)||(33737974-33738050)
chr4 (568-709)||(11325133-11325275)
chr4 (529-710)||(33898975-33899157)
chr4 (529-709)||(23541235-23541414)
chr4 (529-709)||(24143126-24143305)
chr4 (529-684)||(46741763-46741917)
chr4 (646-709)||(19894792-19894855)
chr4 (645-710)||(19183668-19183733)
chr4 (670-727)||(15622573-15622630)
chr4 (529-574)||(26244988-26245033)
[»] chr5 (32 HSPs)
chr5 (395-727)||(24117449-24117784)
chr5 (505-730)||(13941964-13942190)
chr5 (509-721)||(17661387-17661598)
chr5 (529-727)||(20714706-20714905)
chr5 (513-730)||(22979720-22979938)
chr5 (529-710)||(26329201-26329382)
chr5 (529-710)||(30605678-30605859)
chr5 (529-710)||(13734960-13735142)
chr5 (529-710)||(22404748-22404930)
chr5 (529-710)||(13338583-13338763)
chr5 (537-710)||(18221109-18221282)
chr5 (569-730)||(20127026-20127186)
chr5 (529-710)||(26036801-26036982)
chr5 (529-710)||(24189853-24190035)
chr5 (529-709)||(7897903-7898082)
chr5 (529-705)||(17920776-17920951)
chr5 (535-710)||(23420548-23420724)
chr5 (567-730)||(9522564-9522725)
chr5 (529-709)||(26183222-26183402)
chr5 (541-709)||(23623880-23624048)
chr5 (597-727)||(11756179-11756305)
chr5 (529-709)||(20498141-20498321)
chr5 (567-710)||(22184585-22184728)
chr5 (555-709)||(20740925-20741079)
chr5 (529-710)||(20845781-20845962)
chr5 (571-710)||(22246338-22246478)
chr5 (646-707)||(22252031-22252092)
chr5 (529-610)||(25105508-25105589)
chr5 (529-610)||(25164601-25164682)
chr5 (428-610)||(22130922-22131105)
chr5 (670-710)||(9422504-9422544)
chr5 (670-709)||(22130837-22130876)
[»] chr1 (28 HSPs)
chr1 (375-727)||(17379593-17379942)
chr1 (497-730)||(51472060-51472292)
chr1 (505-730)||(17355798-17356022)
chr1 (412-730)||(8281796-8282111)
chr1 (508-721)||(18390080-18390293)
chr1 (529-710)||(4246026-4246208)
chr1 (529-727)||(17851342-17851540)
chr1 (529-710)||(1973304-1973485)
chr1 (497-710)||(12753020-12753233)
chr1 (529-710)||(26972385-26972568)
chr1 (529-710)||(15804098-15804278)
chr1 (505-707)||(23477924-23478126)
chr1 (539-710)||(20841251-20841422)
chr1 (529-710)||(11667849-11668030)
chr1 (497-706)||(17038207-17038414)
chr1 (497-727)||(10340127-10340356)
chr1 (555-707)||(17012019-17012172)
chr1 (646-710)||(13165503-13165567)
chr1 (529-707)||(33062377-33062555)
chr1 (529-710)||(14745769-14745950)
chr1 (646-709)||(45599317-45599380)
chr1 (497-710)||(47941326-47941538)
chr1 (529-598)||(20859641-20859710)
chr1 (508-709)||(40313211-40313411)
chr1 (529-564)||(18379863-18379898)
chr1 (650-709)||(52436807-52436866)
chr1 (390-459)||(17356065-17356135)
chr1 (529-607)||(41330891-41330969)
[»] chr7 (62 HSPs)
chr7 (496-727)||(10251398-10251629)
chr7 (537-730)||(9894033-9894226)
chr7 (496-709)||(23579941-23580155)
chr7 (389-721)||(19352981-19353313)
chr7 (496-730)||(23296458-23296694)
chr7 (567-730)||(24813954-24814116)
chr7 (412-727)||(10038697-10039023)
chr7 (508-727)||(26195428-26195645)
chr7 (529-710)||(26132902-26133082)
chr7 (529-710)||(7586516-7586697)
chr7 (497-710)||(42636206-42636419)
chr7 (528-709)||(7508425-7508605)
chr7 (508-727)||(15708142-15708359)
chr7 (496-730)||(24902066-24902297)
chr7 (509-721)||(14687339-14687550)
chr7 (529-710)||(4458730-4458912)
chr7 (506-721)||(20596800-20597015)
chr7 (401-709)||(9564117-9564426)
chr7 (529-710)||(16207867-16208049)
chr7 (529-710)||(20991533-20991714)
chr7 (391-709)||(23082762-23083082)
chr7 (529-722)||(23057197-23057390)
chr7 (519-707)||(23174870-23175058)
chr7 (415-727)||(6045194-6045506)
chr7 (497-664)||(10658342-10658509)
chr7 (497-730)||(23956836-23957069)
chr7 (529-730)||(14926638-14926839)
chr7 (529-730)||(15350104-15350305)
chr7 (529-710)||(16436765-16436946)
chr7 (506-721)||(20588683-20588897)
chr7 (529-721)||(31269032-31269222)
chr7 (529-710)||(11521396-11521578)
chr7 (529-710)||(645124-645306)
chr7 (529-721)||(11406925-11407117)
chr7 (527-708)||(30226074-30226256)
chr7 (529-710)||(11588455-11588637)
chr7 (529-707)||(10279806-10279983)
chr7 (536-707)||(10309480-10309650)
chr7 (529-710)||(13455098-13455279)
chr7 (529-709)||(42782747-42782927)
chr7 (401-709)||(4794574-4794886)
chr7 (529-699)||(48797616-48797785)
chr7 (401-709)||(9566766-9567075)
chr7 (529-707)||(11998870-11999049)
chr7 (505-710)||(15506234-15506438)
chr7 (646-709)||(14975540-14975603)
chr7 (646-709)||(15405016-15405079)
chr7 (529-709)||(3290671-3290851)
chr7 (529-708)||(14984663-14984841)
chr7 (529-708)||(15414274-15414452)
chr7 (508-709)||(7620051-7620251)
chr7 (570-710)||(12325845-12325986)
chr7 (554-710)||(29546124-29546280)
chr7 (662-710)||(10660987-10661035)
chr7 (646-709)||(11628748-11628811)
chr7 (375-449)||(4547996-4548070)
chr7 (649-710)||(14165277-14165338)
chr7 (537-610)||(21260514-21260587)
chr7 (656-709)||(24049568-24049621)
chr7 (529-709)||(20925089-20925265)
chr7 (655-707)||(4547800-4547852)
chr7 (645-709)||(11560493-11560557)
[»] scaffold0520 (1 HSPs)
scaffold0520 (487-722)||(5367-5602)
[»] chr8 (32 HSPs)
chr8 (496-730)||(12814560-12814793)
chr8 (375-679)||(24384396-24384702)
chr8 (506-719)||(1562345-1562558)
chr8 (399-727)||(23249594-23249923)
chr8 (529-710)||(24091948-24092129)
chr8 (567-727)||(24850402-24850562)
chr8 (497-710)||(9996458-9996671)
chr8 (529-710)||(11221259-11221435)
chr8 (588-709)||(23864455-23864576)
chr8 (395-608)||(18753738-18753954)
chr8 (529-721)||(12240229-12240425)
chr8 (529-710)||(23541397-23541579)
chr8 (554-709)||(13660360-13660514)
chr8 (554-709)||(13719003-13719157)
chr8 (548-710)||(22476240-22476403)
chr8 (529-710)||(20254862-20255051)
chr8 (529-710)||(25240396-25240578)
chr8 (529-710)||(33977049-33977230)
chr8 (529-709)||(33466149-33466327)
chr8 (555-709)||(37155513-37155668)
chr8 (555-709)||(8726861-8727015)
chr8 (529-709)||(17880727-17880907)
chr8 (555-712)||(39080982-39081139)
chr8 (645-710)||(45136222-45136287)
chr8 (529-603)||(45133655-45133729)
chr8 (645-710)||(27925433-27925498)
chr8 (508-707)||(17279859-17280057)
chr8 (497-709)||(1683937-1684146)
chr8 (371-472)||(24850661-24850762)
chr8 (670-710)||(22485266-22485306)
chr8 (670-706)||(33961873-33961909)
chr8 (529-610)||(33961752-33961833)
[»] chr3 (46 HSPs)
chr3 (519-730)||(31649672-31649880)
chr3 (529-710)||(295451-295632)
chr3 (529-710)||(6580853-6581034)
chr3 (529-710)||(28051127-28051308)
chr3 (497-710)||(17042740-17042953)
chr3 (529-710)||(15686145-15686325)
chr3 (529-710)||(286878-287060)
chr3 (529-710)||(13790670-13790852)
chr3 (529-710)||(17702397-17702579)
chr3 (529-710)||(18547639-18547821)
chr3 (529-710)||(24195515-24195696)
chr3 (527-709)||(3552202-3552383)
chr3 (529-710)||(18034882-18035063)
chr3 (529-710)||(18064192-18064373)
chr3 (529-709)||(9036699-9036878)
chr3 (508-721)||(14406604-14406818)
chr3 (537-710)||(23954543-23954717)
chr3 (529-709)||(9031369-9031548)
chr3 (535-710)||(15635859-15636035)
chr3 (547-710)||(21094688-21094850)
chr3 (529-707)||(44452471-44452650)
chr3 (633-727)||(215316-215409)
chr3 (588-704)||(7495921-7496037)
chr3 (529-709)||(13917835-13918013)
chr3 (529-730)||(980333-980532)
chr3 (401-706)||(7479128-7479434)
chr3 (497-710)||(18476890-18477101)
chr3 (529-630)||(13524747-13524848)
chr3 (545-710)||(21718912-21719076)
chr3 (497-710)||(8224799-8225008)
chr3 (646-710)||(18483357-18483421)
chr3 (595-710)||(21253979-21254095)
chr3 (529-727)||(3444976-3445172)
chr3 (497-709)||(13913751-13913961)
chr3 (541-610)||(19531970-19532039)
chr3 (513-709)||(11558311-11558501)
chr3 (513-709)||(11567580-11567770)
chr3 (497-710)||(11655980-11656194)
chr3 (646-709)||(8749147-8749210)
chr3 (401-472)||(13917721-13917792)
chr3 (529-687)||(19633878-19634035)
chr3 (649-727)||(13100693-13100770)
chr3 (529-610)||(1919323-1919403)
chr3 (673-710)||(13515582-13515619)
chr3 (645-691)||(12054454-12054500)
chr3 (653-710)||(1919229-1919286)
[»] scaffold0505 (1 HSPs)
scaffold0505 (512-722)||(10012-10221)
[»] scaffold0102 (1 HSPs)
scaffold0102 (529-710)||(36996-37178)
[»] scaffold0423 (1 HSPs)
scaffold0423 (518-730)||(13587-13799)
[»] scaffold0008 (1 HSPs)
scaffold0008 (529-710)||(40326-40507)
[»] scaffold0163 (1 HSPs)
scaffold0163 (375-528)||(3652-3808)
[»] scaffold0684 (1 HSPs)
scaffold0684 (375-528)||(4310-4466)
[»] scaffold0035 (1 HSPs)
scaffold0035 (505-707)||(37333-37536)
[»] scaffold0003 (1 HSPs)
scaffold0003 (529-710)||(26395-26576)
[»] scaffold0226 (3 HSPs)
scaffold0226 (529-710)||(18114-18295)
scaffold0226 (529-710)||(27508-27689)
scaffold0226 (529-710)||(7527-7708)
[»] scaffold0059 (3 HSPs)
scaffold0059 (529-710)||(61460-61641)
scaffold0059 (529-610)||(50179-50260)
scaffold0059 (670-710)||(48331-48371)
[»] scaffold0015 (1 HSPs)
scaffold0015 (506-710)||(202363-202566)
[»] scaffold0103 (1 HSPs)
scaffold0103 (535-710)||(25660-25836)
[»] scaffold0190 (1 HSPs)
scaffold0190 (529-710)||(16611-16793)
[»] scaffold0480 (1 HSPs)
scaffold0480 (634-727)||(11284-11376)
[»] scaffold0064 (2 HSPs)
scaffold0064 (529-709)||(52915-53092)
scaffold0064 (645-705)||(45858-45918)
[»] scaffold0037 (1 HSPs)
scaffold0037 (537-710)||(110243-110418)
[»] scaffold0259 (1 HSPs)
scaffold0259 (529-710)||(17265-17446)
[»] scaffold0185 (1 HSPs)
scaffold0185 (529-704)||(2351-2527)
[»] scaffold0006 (1 HSPs)
scaffold0006 (529-710)||(87726-87908)
[»] scaffold0054 (1 HSPs)
scaffold0054 (412-490)||(74580-74658)
[»] scaffold0022 (1 HSPs)
scaffold0022 (529-709)||(3114-3291)
[»] scaffold0143 (1 HSPs)
scaffold0143 (529-709)||(36289-36467)
[»] scaffold0032 (1 HSPs)
scaffold0032 (529-709)||(103097-103276)
[»] scaffold0088 (1 HSPs)
scaffold0088 (544-710)||(36598-36765)
[»] scaffold0338 (1 HSPs)
scaffold0338 (567-709)||(16201-16344)
[»] scaffold0213 (1 HSPs)
scaffold0213 (401-475)||(2798-2872)
[»] scaffold0328 (1 HSPs)
scaffold0328 (646-709)||(16960-17023)
[»] scaffold0020 (1 HSPs)
scaffold0020 (654-710)||(12497-12553)
[»] scaffold0333 (1 HSPs)
scaffold0333 (529-610)||(5637-5717)


Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-120; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 375 - 729
Target Start/End: Original strand, 31587310 - 31587665
Alignment:
Q  375 tgaaactctggcatgttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaac 474  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| || |||||||    
T  31587310 tgaaattctggtgtgttagctttcagatgttctatgtgatgttccaacaccagatacaaaatacgaatgttgaatgtaatgtttagaacatcatgctaac 31587409  T
Q  475 agaaataaataaaat---gcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggct 571  Q
    |||||||||||||||   | |||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| | |||    
T  31587410 agaaataaataaaataatgaaaacgtaaaagacaagaaagtaaaaagcataggaggattgttaacccagttcggtgacaaacacacctactctg-gagct 31587508  T
Q  572 accaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaatt 671  Q
    ||||| ||| ||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| ||    
T  31587509 accaagccaggaaggaaatccactagtgtagtccttattctaagttctcagcaaactccaagtttacaactctagacctaggacctacatgtattgactt 31587608  T
Q  672 caacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaac 729  Q
    |||||||||||||||||||||| ||||| |||| |||| || ||||||||||||||||    
T  31587609 caacctaggaactcctagatcttagatctcatcccacttcc-ctcaatcaatcacaac 31587665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 390 - 727
Target Start/End: Original strand, 27110929 - 27111268
Alignment:
Q  390 ttagctttcagat-gttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaa 488  Q
    ||||||||||||| |||||||| |||||||||| |||  ||  |||| ||||||||| ||| |||| |||| ||| || ||||||||  |||||| | ||    
T  27110929 ttagctttcagatcgttctatgcgatgttccaataccggactaaaaagacaaatgttaaatttaatattta-aacatcatgctaacaataataaacagaa 27111027  T
Q  489 t---gcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaag 585  Q
    |   | ||| ||| |||| |||||| ||||  || || | | ||||||||||||| |||||||||||||||||||| ||| |||||||||| ||| ||||    
T  27111028 ttgggtaaaagtagaagacaagaaaataaatggcgcaagtgaattgttaacccagatcggtgacaaacacacctactctg-gggctaccaagccaggaag 27111126  T
Q  586 gtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactc 685  Q
    | | |||| |||||||||||||||| ||||||||| ||||||| |||||||| ||||  ||| |||||||||||| ||| | | ||||||||||||||||    
T  27111127 gaagtccactagtgtagtccttattctaagttctcagcaaacttcaagtttacaacttaagaactaggacctacccgtacttacttcaacctaggaactc 27111226  T
Q  686 ctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||||||| ||||| ||||||||| | |||||||||||||||    
T  27111227 ctagatctgagatctcatctcacttcaactcaatcaatcaca 27111268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 529 - 730
Target Start/End: Complemental strand, 24317979 - 24317778
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaac 627  Q
    ||||||||||| |||||||||||||||||||||| ||| ||| |||||| ||| ||||| |||||| |||||||||||||||| ||||||||| ||||||    
T  24317979 ttgttaacccaattcggtgacaaacacacctacatctgggggttaccaagccaggaaggaaatccactagtgtagtccttattctaagttctcagcaaac 24317880  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||  ||||| ||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||  |||| ||||||||| || ||||||||||||||    
T  24317879 tcctggtttataactctagacctaggacctacccatattgacttcaacctaggaagtcctagatctgtgatcgcatctcacttcc-ctcaatcaatcaca 24317781  T
Q  728 acc 730  Q
    |||    
T  24317780 acc 24317778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 508 - 725
Target Start/End: Complemental strand, 24317380 - 24317162
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctaca-ctgcggg-ctaccaaaccaagaaggtaatccaatagtgtagtcc 605  Q
    ||||||||| |||||   || |||||||| ||||||||||||||||||||||||| ||| ||| |||||||   |  |||| |||||| |||||||||||    
T  24317380 aaagtaaaaggcacaattggtttgttaactcagttcggtgacaaacacacctacatctggggggctaccaagttataaaggaaatccactagtgtagtcc 24317281  T
Q  606 ttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatct 705  Q
    ||||| |||||||||  ||||||||  ||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||    
T  24317280 ttattctaagttctcaacaaactcctcgtttacaactctagacctaggacctacccgtattgacttcaaactaggaactcctagatctgagatcccatct 24317181  T
Q  706 cactaccactcaatcaatca 725  Q
     ||| || ||||||||||||    
T  24317180 aacttcc-ctcaatcaatca 24317162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 412 - 719
Target Start/End: Complemental strand, 19198565 - 19198257
Alignment:
Q  412 gatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaat---gcaaacgtaaaagataaga 508  Q
    ||||||||||||||| |||||||| |  |||||||| | ||||||||| ||| |||||||| ||  || ||||| |||   | ||| |||||||| ||||    
T  19198565 gatgttccaacaccagacacaaaagaagaatgttgagtttaatgttta-aacatcgtgctatcaataacaaatagaataaggtaaaagtaaaagacaaga 19198467  T
Q  509 aagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctta 608  Q
    |||||||   |||| | | ||||||||||  ||| |||||||||||||||||| ||| |||||| ||| ||| ||||| |||||| |||||||||||||     
T  19198466 aagtaaatgccacatgtgaattgttaaccttgtttggtgacaaacacacctactctg-gggctatcaagccaggaaggaaatccactagtgtagtccttg 19198368  T
Q  609 ttataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcac 708  Q
    || ||||||||| ||||||||| ||||   ||||    ||||| |||||||| ||  ||| |||||||||||||| ||||||||| ||||||||||||||    
T  19198367 ttctaagttctcagcaaactccgagttccaaacttataacctaagacctacccgttctgacttcaacctaggaacgcctagatctgagatcccatctcac 19198268  T
Q  709 taccactcaat 719  Q
    | |||||||||    
T  19198267 ttccactcaat 19198257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 36398963 - 36398781
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| | ||| |||| ||||||    
T  36398963 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaac 36398864  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||||||||||||||| || | || |||||||||||||||||||||||| ||||||||||||||||    
T  36398863 tcctcgttta-cactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcacta 36398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 544 - 717
Target Start/End: Original strand, 25347199 - 25347372
Alignment:
Q  544 ggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactc 643  Q
    |||||||||||||||||| ||| |||||||||| |||  |||| || ||| |||||||||||||||| ||||||||  |||||||||||||||| ||||     
T  25347199 ggtgacaaacacacctactctgggggctaccaagccagaaaggaaacccactagtgtagtccttattctaagttcttagcaaactccaagtttacaactt 25347298  T
Q  644 tagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactca 717  Q
     ||| |||||||||||| ||| | | ||||||||| |||||||| |||||||||||||| |||||| |||||||    
T  25347299 aagaactaggacctacccgtactaacttcaacctatgaactcctcgatctaagatcccagctcacttccactca 25347372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 23758616 - 23758798
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||||||||||||||||||| |||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| |  |||||||  |||||    
T  23758616 ttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagttctcaacaaac 23758715  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  23758716 tcctcgttta-cactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 23758798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 508 - 726
Target Start/End: Complemental strand, 20649746 - 20649528
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    |||||||||  |||||  || ||||||||||||||||| ||||||||||||||| ||  ||||||| ||  || ||||| |||||| |||||||||||||    
T  20649746 aaagtaaaagccacagttggtttgttaacccagttcggggacaaacacacctactctaggggctacaaagtcaggaaggaaatccactagtgtagtcctt 20649647  T
Q  608 attataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
     || ||||||||  |||||||||||||||| ||||    |||||||||||||| ||| ||  |||||||||||||||||||||| | ||||| |||||||    
T  20649646 gttctaagttcttagcaaactccaagtttacaacttatcacctaggacctacccgtactggcttcaacctaggaactcctagatttgagatctcatctca 20649547  T
Q  708 ctaccactcaatcaatcac 726  Q
     |  | |||||||||||||    
T  20649546 ttttccctcaatcaatcac 20649528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 529 - 730
Target Start/End: Complemental strand, 20475444 - 20475243
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaact 628  Q
    ||||||||||| ||||||||||||||  ||| |  || |||| ||||| ||| ||| | ||| || ||||||||||||  || | ||||||| |||||||    
T  20475444 ttgttaacccaattcggtgacaaacatgcctgctttgggggcaaccaagccaggaaagaaattcactagtgtagtcctagttcttagttctcagcaaact 20475345  T
Q  629 ccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaa 728  Q
    ||||||||| ||||    |||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||  | |||||||||||||||    
T  20475344 ccaagtttacaacttatcacctaggacctacccgtattgacttcaacctaggagctcctagatctgagatcccatctcactttccctcaatcaatcacaa 20475245  T
Q  729 cc 730  Q
    ||    
T  20475244 cc 20475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 532 - 710
Target Start/End: Complemental strand, 19466688 - 19466510
Alignment:
Q  532 ttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactcc 630  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| || || |||| | |||||||    
T  19466688 ttaacccagttcggtgataaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagaaaactcc 19466589  T
Q  631 aagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
       ||||  |||  |||||||||||||||| ||||| | |||||||||||||||||||||||| |||||| |||||||||    
T  19466588 tcattta-cactaaagacctaggacctacccgtattaatttcaacctaggaactcctagatctgagatccaatctcacta 19466510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 529 - 721
Target Start/End: Original strand, 12952463 - 12952655
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaact 628  Q
    |||||||||||||||||||||||||||||||||  ||  |||||||||  || ||||| |||||| ||||||||||||  || |||||| || |||||||    
T  12952463 ttgttaacccagttcggtgacaaacacacctactatggaggctaccaagtcaggaaggaaatccactagtgtagtcctagttctaagttatcagcaaact 12952562  T
Q  629 ccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatca 721  Q
    ||||||||| ||||    | ||||   ||||| ||| ||| |||||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  12952563 ccaagtttacaacttatcatctagacactacccgtactgacttcaacctaggagctcctagacctgagatcccatctcacttccactcaatca 12952655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 588 - 727
Target Start/End: Original strand, 27107560 - 27107699
Alignment:
Q  588 aatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcct 687  Q
    |||||| || ||||||||||||| ||||||||| |||||||||||||||| ||||  |||||||||||||||| ||| ||| ||||||||||||||||||    
T  27107560 aatccactattgtagtccttattctaagttctcagcaaactccaagtttacaacttaagacctaggacctacccgtactgacttcaacctaggaactcct 27107659  T
Q  688 agatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||| | ||||| | |||||||  ||| ||||||||||||    
T  27107660 agatttgagatctcgtctcacttgcacgcaatcaatcaca 27107699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 567 - 730
Target Start/End: Complemental strand, 20476707 - 20476544
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtatt 666  Q
    |||||||||| | | ||||| ||| || | ||||||||||  || | ||||||| |||||||||||||||| ||||    |||||||||||||| |||||    
T  20476707 gggctaccaagctaggaaggaaattcactggtgtagtcctagttcttagttctcagcaaactccaagtttacaacttatcacctaggacctacccgtatt 20476608  T
Q  667 gaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
    || |||||||||| ||||| ||||||| ||||||||||||||| || |||||||||||||||||    
T  20476607 gacttcaacctagaaactcttagatctgagatcccatctcacttcccctcaatcaatcacaacc 20476544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 24790327 - 24790145
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||||  || ||||| |||||| ||| |||||||||||| |  |  |||| ||||||    
T  24790327 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagagtagtccttattcaatatctctcagcaaac 24790228  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||| ||||||    
T  24790227 tcctcgttta-cactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcacta 24790145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 536 - 727
Target Start/End: Complemental strand, 21250358 - 21250168
Alignment:
Q  536 cccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaactccaagt 634  Q
    |||||||||||||||||||||||||| ||| |||||||||| | | ||||| |||||  |||||||||| ||||| ||| |||||| | ||||  || ||    
T  21250358 cccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccgttagtgtagtcgttattttaaagttctcagtaaac--cacgt 21250261  T
Q  635 ttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    ||| ||||  |||||||||||||||| || | || |||||||||||| ||||||||||| ||||| |||||||||| |   ||||||||||||    
T  21250260 ttacaacttaagacctaggacctacccgtctagacttcaacctaggatctcctagatctgagatctcatctcactatcctacaatcaatcaca 21250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 12910480 - 12910662
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||||||||||| |||||| ||| |||||||||| ||| ||||| ||||||  |||||||||||||||  | || | || ||||||    
T  12910480 ttgttgacccagttcggtgacaaacatacctactctgggggctaccaagccaggaaggaaatccacaagtgtagtccttattcaatagctttcagcaaac 12910579  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||   ||||| | || || | ||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  12910580 tcgtcgtttaca-ctatatggcctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 12910662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 388 - 586
Target Start/End: Original strand, 27106727 - 27106926
Alignment:
Q  388 tgttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaa 487  Q
    ||||||||||||||||||||||| ||||||||||||| | | |||||| || |||||||||| ||||||||| ||| | |||||||||  |||||| | |    
T  27106727 tgttagctttcagatgttctatgcgatgttccaacactagaaacaaaagacgaatgttgaatttaatgttta-aacattgtgctaacaataataaacaga 27106825  T
Q  488 at---gcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaa 584  Q
    ||   | ||| |||||||| |||||||||||  ||||| | | |||||||||| |||||||||||||| |||||||| ||| | ||||||||  ||||||    
T  27106826 attaggtaaaagtaaaagacaagaaagtaaatggcacaagtgcattgttaacctagttcggtgacaaatacacctactctg-gagctaccaaggcaagaa 27106924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 22610883 - 22611065
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||||    |||  |||||   | ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  22610883 ttgttgacccagttcggtgacaaacacacctacaaaaggggaaaccaagaaaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 22610982  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  22610983 tcctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 22611065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 537 - 730
Target Start/End: Original strand, 21530384 - 21530576
Alignment:
Q  537 ccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtt 635  Q
    ||||||||||||||||||  ||||| ||  |||||||||| ||||||||| |||||| ||||||||| |||||| || || |||| ||||| |||  |||    
T  21530384 ccagttcggtgacaaacatgcctactctaggggctaccaagccaagaaggaaatccactagtgtagttcttattctatagctctcagcaaattcctcgtt 21530483  T
Q  636 tagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
    ||   ||  ||||||||||||||||  |||||| |||||| |||||||||||| |||| |||||||||||||||| |   |||||||||||||||    
T  21530484 tacg-ctaaagacctaggacctacca-tattgatttcaacttaggaactcctaaatctgagatcccatctcactatcctacaatcaatcacaacc 21530576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 567 - 710
Target Start/End: Complemental strand, 26860427 - 26860283
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta-gacctaggacctacctgta 664  Q
    |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| |||||||||  ||||| | || || ||||||||||||||| |||    
T  26860427 gggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttaca-ctatatgacctaggacctacccgta 26860329  T
Q  665 ttgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    | || |||||||||||||||||||||||| ||||| ||||||||||    
T  26860328 tagatttcaacctaggaactcctagatctgagatctcatctcacta 26860283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 529 - 721
Target Start/End: Complemental strand, 24283697 - 24283505
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaact 628  Q
    |||||||  |||||||||||||||||||||||  ||| ||||||||||  || ||||| |||| | ||||||||||||  || || |||||| |||||||    
T  24283697 ttgttaattcagttcggtgacaaacacacctattctgggggctaccaagtcaggaaggaaatctactagtgtagtcctagttctatgttctcagcaaact 24283598  T
Q  629 ccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatca 721  Q
    ||||||||  ||||    |||| |   ||||| ||| ||| |||||||||| ||||||||   || ||||||||||||||| |||||||||||    
T  24283597 ccaagtttgcaacttatcaccttgacactacccgtactgacttcaacctagaaactcctaagccttagatcccatctcacttccactcaatca 24283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 567 - 709
Target Start/End: Original strand, 29566040 - 29566182
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtat 665  Q
    |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| |||||||||  |||| | |||   ||||||||||||||| |||     
T  29566040 gggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgttt-gcactaatgacctaggacctacccgtac 29566138  T
Q  666 tgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||| |||||||||| ||||||||||||| |||||||||||||||    
T  29566139 tgacttcaacctagaaactcctagatctgagatcccatctcact 29566182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 707
Target Start/End: Original strand, 18765667 - 18765845
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| |  || |||| | ||||    
T  18765667 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagtaaac 18765765  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    |||  |||| | ||| || |||||||||| |||| ||| | | |||||||||||||||| ||||||| |||||||||||||    
T  18765766 tcctcgttt-gcactatatgacctaggacttacccgtactaacttcaacctaggaactcgtagatctgagatcccatctca 18765845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 645
Target Start/End: Complemental strand, 23802008 - 23801859
Alignment:
Q  496 gtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaat 595  Q
    |||||||| |||||| ||||| ||| | ||| || |||||||||||||||||| |||||||| |||   | |||||||||| | | ||| | |||||| |    
T  23802008 gtaaaagacaagaaaataaaaggcataagagaatcgttaacccagttcggtgagaaacacacatacttggggggctaccaagcaaggaatgaaatccact 23801909  T
Q  596 agtgtagtccttattataagttctcggcaaactccaagtttagaactcta 645  Q
    |  |||||||||||| |||||||||  ||||||||  ||||| |||||||    
T  23801908 aaagtagtccttattctaagttctcaccaaactcctcgtttacaactcta 23801859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 709
Target Start/End: Complemental strand, 13315017 - 13314954
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| ||| ||||| | |||||||||||||||| |||||||||||||||    
T  13315017 gacctaggacctacccgtactgacttcaatcaaggaactcctagatctgagatcccatctcact 13314954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 15328300 - 15328380
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||||||||||||||||| |||    |||||| ||| |||||||||| ||||||||| |||||| ||||||||||||||||    
T  15328300 ttgttaacccagttcggtg-caatgttacctactctgggggctaccaagccaagaaggaaatccattagtgtagtccttatt 15328380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 215; Significance: 1e-117; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 389 - 730
Target Start/End: Original strand, 30424783 - 30425127
Alignment:
Q  389 gttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaa 488  Q
    |||| ||||||||| |||||||||| |||||||||||| ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||    
T  30424783 gttaactttcagatattctatgtgacgttccaacaccagacacaaaatacgaaggttgaatgtaatgtttagaacatcgtgctaacagaaataaataaaa 30424882  T
Q  489 ---tgcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaag 585  Q
       ||||||||||||||| ||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||| ||  |||||||||| ||||||||    
T  30424883 caatgcaaacgtaaaagacaagaaagtaaaatacacaggaagattgttgaaccagttcggtgacaaacacacctactctaggggctaccaagccaagaag 30424982  T
Q  586 gtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactc 685  Q
    | |||||| ||||||| | |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||     
T  30424983 gaaatccattagtgtaattcttattctaagttctcagcaaactccaagtttacaactctagacctaggacctacttgtattgacttcaacctaggaactt 30425082  T
Q  686 ctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||    
T  30425083 ctagatctgagatcctatctcacttccactcaatcaatcacaacc 30425127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 25805444 - 25805625
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||| |||| |||||||||||||||||||| ||   ||||||||| ||| ||||| |||||| ||||||||||||||||||| || |||| ||||||    
T  25805444 ttgttaaaccagatcggtgacaaacacacctactctagaggctaccaagccaggaaggaaatccactagtgtagtccttattatatagctctcagcaaac 25805543  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25805544 tcctcgtttaca-ctaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcacta 25805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 529 - 730
Target Start/End: Complemental strand, 26965739 - 26965537
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| |||  ||||| |||  || ||||| |||||| |||||||||||||||| ||| |||||| ||||||    
T  26965739 ttgttgacccagttcggtgacaaacacacctactctggaggctatcaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 26965640  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||   |||| ||||  |||||||||||||||| || | || |||||||||||||||||||||||| |||||||||||||||| |   ||||||||||||    
T  26965639 tcctcatttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatcctacaatcaatcaca 26965540  T
Q  728 acc 730  Q
    |||    
T  26965539 acc 26965537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 518 - 730
Target Start/End: Complemental strand, 20765173 - 20764962
Alignment:
Q  518 gcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagtt 617  Q
    ||||| ||| || ||||||||||||||||||||||||||| ||| ||| |||| ||||| ||| ||||  | |||| |||||||||||||||| ||||||    
T  20765173 gcacaagagaatggttaacccagttcggtgacaaacacacttactctgggggcgaccaagccaggaagaaagtccactagtgtagtccttattctaagtt 20765074  T
Q  618 ctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactca 717  Q
    |||  ||||||    ||||| |||||||||||||||||||||| || |||| ||||||||| |||||| ||||||| ||||| ||||||||| || ||||    
T  20765073 ctcaacaaactttccgtttacaactctagacctaggacctacccgtcttgacttcaacctaagaactcttagatctgagatctcatctcacttcc-ctca 20764975  T
Q  718 atcaatcacaacc 730  Q
    ||||| |||||||    
T  20764974 atcaaccacaacc 20764962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 24501815 - 24501996
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||||||||||||||||| ||   ||||||||| |||  |||| |||||| |||||||||||||||| || || |||| ||||||    
T  24501815 ttgttaacccagttcggtgacaaacacacctactctagaggctaccaagccagaaaggaaatccactagtgtagtccttattctatagctctcagcaaac 24501914  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| | ||  |||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  24501915 tcctcatttaca-ctaaagacctaggacctacccgtattgatttcaacctagaaactcctagatctaagatcccatctcacta 24501996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 500 - 721
Target Start/End: Complemental strand, 18152903 - 18152682
Alignment:
Q  500 aagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtg 599  Q
    |||| |||||||||||  ||||||  | |||||||||||||||| |||||||||||||||||  ||  |||||||||  || ||||| |||||| ||| |    
T  18152903 aagacaagaaagtaaatggcacagctgaattgttaacccagttcagtgacaaacacacctactatggaggctaccaaggcaggaaggaaatccactagcg 18152804  T
Q  600 tagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatc 699  Q
    |||||||| || || ||||||  ||||||||||||| | ||||    || || |||||||||| | ||| |||||||||||||||||||||||| |||||    
T  18152803 tagtccttgttctacgttctcaacaaactccaagttcacaacttataacataagacctacctgcactgacttcaacctaggaactcctagatctgagatc 18152704  T
Q  700 ccatctcactaccactcaatca 721  Q
     ||||||||| |||||||||||    
T  18152703 tcatctcacttccactcaatca 18152682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 17864593 - 17864412
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||| |||||| ||| ||||  |||||| |||||||||||||||| || || |||| ||||||    
T  17864593 ttgttgacctagttcggtgacaaacacacctactctgggggttaccaatccaggaagaaaatccactagtgtagtccttattctatagctctcagcaaac 17864494  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  ||  ||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  17864493 tcctcgtttaca-ctaaagtactaggacctacctgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 17864412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 23882862 - 23882681
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||||| || ||||| |||||| |||||||||| ||||| || || || | ||||||    
T  23882862 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaaatcaggaaggaaatccactagtgtagtctttattctatagctcccagcaaac 23882763  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||   |||||  |||  |||||||||||||||||||||||| ||||||||| |||||||||||||| | ||| ||||||||||    
T  23882762 tctttgttta-cactaaagacctaggacctacctgtattgatttcaacctatgaactcctagatctgatatctcatctcacta 23882681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 20470371 - 20470190
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||| ||||| ||||||||| |||  ||||||||| ||| ||||| |||||| ||||||| |||||||| || || |||| ||||||    
T  20470371 ttgttgacccagttcggcgacaatcacacctactctggaggctaccaagccaggaaggaaatccactagtgtactccttattctatagctctcagcaaac 20470272  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  |||||||||||||||| |||| || |||||||||||||||||||||||| ||||| ||||||||||    
T  20470271 tcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcacta 20470190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 401 - 730
Target Start/End: Complemental strand, 21323572 - 21323242
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaatgcaaacgtaaa 500  Q
    |||||||||| ||||||||||||||||||||| | |||  ||||||| ||||||||||||||| |||||||| |||   |||| |||||  ||| | |||    
T  21323572 atgttctatgcgatgttccaacaccaaacacagattacggatgttgagtgtaatgtttagaacatcgtgctagcag---taaacaaaattaaaaaggaaa 21323476  T
Q  501 agataagaa-agtaaaat------gcacaggaggattgttaacccagttcggtgacaaacacacctacact-gcgggctaccaaaccaagaaggtaatcc 592  Q
    | | ||||| || |||||      ||||||   | ||||||||||| |||||  |||| | |||||||| | | ||||||||||| || ||||| |||||    
T  21323475 ata-aagaacagaaaaataaaaaggcacagagagtttgttaacccaattcggc-acaa-ctcacctacatttgggggctaccaaatcaggaaggaaatcc 21323379  T
Q  593 aatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatc 692  Q
    | |||||||||||||||| |||||| ||  ||||||||   |||| ||||||||| |||||| ||| | ||||||| |||||||||||||||||||||||    
T  21323378 actagtgtagtccttattctaagttatcaacaaactcctcatttacaactctagaactaggatctaaccgtattgacttcaacctaggaactcctagatc 21323279  T
Q  693 taagatcccatctcactaccactcaatcaatcacaacc 730  Q
    | ||||| ||||||||| || |||||| || |||||||    
T  21323278 tgagatctcatctcacttcc-ctcaatgaaccacaacc 21323242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 13195314 - 13195496
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| |||||| |||||||||||||||| ||  |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| | ||||    
T  13195314 ttgttgacctagttcgatgacaaacacacctactctaggggctaccaagccatgaaggaaatccactagtgtagtccttattcaatagctctcagaaaac 13195413  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  13195414 tcctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 13195496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 17855185 - 17855367
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||| |||||||||||||||||||| |||  ||||| ||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  17855185 ttgttgacccagatcggtgacaaacacacctactctggaggctatcaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 17855284  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||| ||||||||||    
T  17855285 tcctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcacta 17855367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 539 - 710
Target Start/End: Complemental strand, 9281867 - 9281695
Alignment:
Q  539 agttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaactccaagttta 637  Q
    ||||||||||||||||||||||| ||| |||||||||| ||  ||||| |||||| |||||||||||||||| |  || |||| |||||||||  |||||    
T  9281867 agttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgttta 9281768  T
Q  638 gaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
      ||| || |||||| |||||||| |||| || |||||||||||||||||||||| | ||||||||||||||||    
T  9281767 -cactatatgacctaagacctacccgtatagacttcaacctaggaactcctagatttgagatcccatctcacta 9281695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 33665784 - 33665966
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||||| || ||| ||||| |||||| |||||||||||||||| |  || |||| ||||||    
T  33665784 ttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 33665883  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||| ||||||||||| |||| || ||||||| |||||||||||||||| ||||| ||||||||||    
T  33665884 tcctcgttta-cactatatgacataggacctacccgtatagacttcaaccaaggaactcctagatctgagatctcatctcacta 33665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 29255083 - 29254903
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||| ||| ||||||||||||| ||  |||||| ||| ||| ||||  |||||| |||||||||||||||| || || |||| ||||||    
T  29255083 ttgttgacccagttcagtggcaaacacacctactcta-gggctatcaagccaggaagaaaatccactagtgtagtccttattctatagctctcagcaaac 29254985  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  |||||||||||||||| ||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  29254984 tcctcgtttaca-ctaaagacctaggacctacccgtattgatttcaacttatgaactcctagatctgagatcccatctcacta 29254903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 11960472 - 11960655
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt-attataa-gttctcggcaaa 626  Q
    ||||||||||| ||| ||||||||||||||||| ||   ||||||||| ||| ||||| |||| | |||||||||| || ||| ||| |||||| |||||    
T  11960472 ttgttaacccaattcagtgacaaacacacctaccctcaaggctaccaagccacgaaggaaatctattagtgtagtcttttattctaaagttctcagcaaa 11960571  T
Q  627 ctccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||  ||||| ||||  |||||||||||||||| || | || ||||||||||||||||||| |||| | ||| ||||||||||    
T  11960572 ctcctcgtttacaactgaagacctaggacctacccgtctagacttcaacctaggaactcctacatctgatatctcatctcacta 11960655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 17528053 - 17527871
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||||||||||| |||||||||||||||||  |  |||||||||| |||  ||| ||||||| |||||||||||||||| |  ||||||| ||||||    
T  17528053 ttgttaacccagttcagtgacaaacacacctactattggggctaccaagccagaaagttaatccactagtgtagtccttattcaatagttctcagcaaac 17527954  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || |||||||||||||||  ||| || |||||||||||||||| ||||||  |||| |||||||||||    
T  17527953 tccttgttta-cactatatgacctaggacctacccatatagacttcaacctaggaactcatagatcagagattccatctcacta 17527871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 401 - 709
Target Start/End: Complemental strand, 16309655 - 16309346
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaa---taaataaaatgcaaacgt 497  Q
    |||||||||| |||||||||| ||  |  |||  ||||||||||||||||  ||||||||||| |||||||| ||| ||   ||||||| |    ||  |    
T  16309655 atgttctatgcgatgttccaaaacttagtacaggatacaaatgttgaatgagatgtttagaacatcgtgctagcagcaaacataaataatacaacaaaat 16309556  T
Q  498 aaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatag 597  Q
    ||||||   |||||||||| |||||||| | ||||||||||||||| ||| |||   ||||||| ||| |||||||||| ||| || || |||||| |||    
T  16309555 aaaagacgggaaagtaaaaggcacaggaagtttgttaacccagttcagtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccactag 16309458  T
Q  598 tgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaag 696  Q
    | ||||||||||| |  || |||| |||||||||  ||||| | ||  |||||||||||||||| || |||| |||||||||||||||| ||||||| ||    
T  16309457 tatagtccttattctctagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccgtcttgacttcaacctaggaactcgtagatctgag 16309359  T
Q  697 atcccatctcact 709  Q
    ||| |||||||||    
T  16309358 atctcatctcact 16309346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 20989933 - 20989752
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||||||| |||||||||| ||| ||||||||||  ||  |||| |||||| |||||||||||||||| || || |||| ||||||    
T  20989933 ttgttgacccagttcggtgacagacacacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctcagcaaac 20989834  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  | |  ||||||| ||||||||||||| || || ||||||| ||||||||||||  ||||| ||||||||||    
T  20989833 tcctcgttta-cattaaagacctatgacctacctgtatagacttgaacctagaaactcctagatccgagatctcatctcacta 20989752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 17234582 - 17234764
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||||| |||||||||||||||||| ||  |||||||||| || |||||| ||||||  ||||||||||||||| |  || |||| ||||||    
T  17234582 ttgttgacccagtttggtgacaaacacacctactctaggggctaccaagcccagaaggaaatccaccagtgtagtccttattcaatagctctctgcaaac 17234681  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || |||||| |||||||| |||| || |||||||||||||||||||||||| | ||| ||||| ||||    
T  17234682 tccctgttta-cactatatgacctatgacctacccgtatagacttcaacctaggaactcctagatctgatatctcatcttacta 17234764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 8465836 - 8465659
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||| ||||||||||||||||||||| ||| ||||| |||| ||| |||     |||  |||||||||||||| | || || |||| ||||||    
T  8465836 ttgttgacccatttcggtgacaaacacacctactctgggggctgccaagccaggaat----tccgctagtgtagtccttactctatagctctcagcaaac 8465741  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||| |||| | ||  |||||||||||||||| |||| || ||||| || ||||||||||||||| ||||||||||||||||    
T  8465740 tccaaatttaca-ctaaagacctaggacctacccgtatagacttcaatcttggaactcctagatctgagatcccatctcacta 8465659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 12444887 - 12444710
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||||||||||||||||||| ||||||||| |||  ||||||||| | | ||||| | |||| ||||||||||| |||| | ||| |||| ||||||    
T  12444887 ttgttaacccagttcggtgacaa-cacacctactctggaggctaccaagctaggaaggaactccactagtgtagtccgtattcaaaagctctcagcaaac 12444789  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
      || |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||||||||| | |||||||| ||||||    
T  12444788 --cacgttt-gcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatttgagatcccacctcact 12444710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 15897842 - 15897661
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| | | ||||| |||||| |||||||||||||||| || || |||  ||||||    
T  15897842 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattctatagctcttagcaaac 15897743  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| || |   |||||||||||||||  ||| ||  | |||||||||||  |||||||| |||||| |||||||||    
T  15897742 tcctcatttacaa-taacgacctaggacctacccatatagacgtaaacctaggaacgactagatctgagatccaatctcacta 15897661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 14258901 - 14259083
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||||||||||| ||||||||||||  || |||||||||| | | ||||| |||||| |||||||||||||||| |  || ||||  |||||    
T  14258901 ttgttgacccagttcggtgagaaacacacctactttgggggctaccaagcgaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaac 14259000  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |    ||||| || | || ||||||||||||||| |||| || ||| || || |||||||||||||| ||||||||||||||||    
T  14259001 ttatcgtttacaa-tatatgacctaggacctacccgtatagacttccacttatgaactcctagatctgagatcccatctcacta 14259083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 573 - 710
Target Start/End: Complemental strand, 21723533 - 21723395
Alignment:
Q  573 ccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtattgaat 670  Q
    |||| ||| ||||| |||||| ||||||||||||||||  | || |||| |||||||||  ||||| | || || ||||||||||||||| || | || |    
T  21723533 ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttaca-ctatatgacctaggacctacccgtctagatt 21723435  T
Q  671 tcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21723434 tcaacctaggaactcctagatctgagatcccatctcacta 21723395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 490
Target Start/End: Complemental strand, 20138071 - 20137993
Alignment:
Q  412 gatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaatg 490  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||  ||||||| | ||||||||||||    
T  20138071 gatgttccaacaccatacacaaattacgaatgttgaatgtaatgtttagaacatcaagctaacaaatataaataaaatg 20137993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 490
Target Start/End: Original strand, 22194798 - 22194876
Alignment:
Q  412 gatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaatg 490  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||  ||||||| | ||||||||||||    
T  22194798 gatgttccaacaccatacacaaattacgaatgttgaatgtaatgtttagaacatcaagctaacaaatataaataaaatg 22194876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 645 - 710
Target Start/End: Complemental strand, 3567474 - 3567409
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| ||||||||||    
T  3567474 agacctaggacctacccgtattgatttcaacctaagaacttctagatctaagatctcatctcacta 3567409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 645 - 730
Target Start/End: Original strand, 28623635 - 28623720
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| | ||||| |||||||||| |   ||| |||||||||||    
T  28623635 agacctaggacctacccgtattgatttcaacctaggaactcctagatttgagatctcatctcactatcctacaaccaatcacaacc 28623720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 567 - 710
Target Start/End: Complemental strand, 34657282 - 34657138
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta-gacctaggacctacctgta 664  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||  | || |||| |||||||||  ||||| | || || ||||||||||| ||| |||    
T  34657282 gggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttaca-ctatatgacctaggaccaacccgta 34657184  T
Q  665 ttgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    | || ||||||||||||||||| |||||| ||||  ||||||||||    
T  34657183 tagatttcaacctaggaactcccagatctgagatatcatctcacta 34657138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 531 - 709
Target Start/End: Complemental strand, 15003328 - 15003150
Alignment:
Q  531 gttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactc 629  Q
    ||||||||||||||||| |||   ||||||| |||  || |||||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||||    
T  15003328 gttaacccagttcggtg-caatgtcacctactctggtggataccaagccatgaaggaaatccactagtgtagtccttattcaatagctctcagcaaactc 15003230  T
Q  630 caagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |  |||| | ||| || ||||||||||||||| ||| ||| |||||| ||||||||||||||| | ||||| |||||||||    
T  15003229 cttgttt-gcactatatgacctaggacctacccgtactgacttcaacataggaactcctagatttgagatctcatctcact 15003150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 25964803 - 25964867
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||| ||||||    
T  25964803 gacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcacta 25964867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 25969450 - 25969514
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||| ||||||    
T  25969450 gacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcacta 25969514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 25973890 - 25973954
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||| ||||||    
T  25973890 gacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcacta 25973954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 602
Target Start/End: Original strand, 25782802 - 25782875
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtag 602  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||| |||  |||| |||||| ||||||||    
T  25782802 ttgttaacccagttcggtgacaaacacacctactctggaggctaccaagccagtaaggaaatccactagtgtag 25782875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 529 - 688
Target Start/End: Complemental strand, 12039850 - 12039691
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||| |||||||||||  || |||||||||| | | ||||| ||||   |||||||||||||||| || || ||||  |||||    
T  12039850 ttgttgacctagttcggtgacgaacacacctactttgggggctaccaagctaggaaggaaatcttctagtgtagtccttattctatagctctcaacaaac 12039751  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactccta 688  Q
    |||  |||||  |||  |||||||||||||||  |||| || |||||||||||||||||||    
T  12039750 tcctcgttta-cactaaagacctaggacctactcgtatagacttcaacctaggaactccta 12039691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 19171524 - 19171588
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||| |||| |||||||||||    
T  19171524 gacctaggacctacccgtatagacttcaacctatgaactcctagatctgagattccatctcacta 19171588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 709
Target Start/End: Original strand, 9384643 - 9384784
Alignment:
Q  568 ggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtat 665  Q
    |||||||||  || ||||| |||||| ||||||||||||||||  | || |||| |||||||||  |||| | ||| || ||||||||||||||| |||     
T  9384643 ggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgttt-gcactatatgacctaggacctacccgtac 9384741  T
Q  666 tgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||| ||||||||||||||| || ||||| |||||||||||||||    
T  9384742 tgacttcaacctaggaact-cttgatctgagatcccatctcact 9384784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 709
Target Start/End: Original strand, 15038455 - 15038518
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||| ||| ||| ||| |||||||||| ||||||||||||| |||||||||||||||    
T  15038455 gacctaggaccaacccgtactgacttcaacctagtaactcctagatctgagatcccatctcact 15038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 709
Target Start/End: Complemental strand, 16137724 - 16137570
Alignment:
Q  555 cacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctagg 653  Q
    ||||||| ||| |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| |||||||||  |||| | | |   ||||||||    
T  16137724 cacctactctgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgttt-gcagtaatgacctagg 16137626  T
Q  654 acctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    | ||||| ||| ||| |||||||||||||||| || |||| ||||| |||||||||    
T  16137625 atctacccgtactgacttcaacctaggaactcataaatctgagatcacatctcact 16137570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 709
Target Start/End: Original strand, 20003245 - 20003308
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| | | |||||||||||||||||||||| | |||||||||||||||    
T  20003245 gacctaggacctacccgtacttacttcaacctaggaactcctagatttgagatcccatctcact 20003308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 20558293 - 20558474
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagt-tctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||  |||  ||||||||| ||| ||||| |||||| |||||||| ||||||| |||   |||| ||||||    
T  20558293 ttgttaacccagttcggtg-caacgtcacctagtctggaggctaccaagccaggaaggaaatccactagtgtagcccttattctaaaactctcagcaaac 20558391  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| || | || ||||||||| |||||||||||| | ||||| ||||||||||    
T  20558392 tcctcgtttaca-ctttatgacctaggacctacccgtctagacttcaacctaagaactcctagatatgagatctcatctcacta 20558474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 709
Target Start/End: Original strand, 19216061 - 19216124
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| | | |||||| ||||||||||||||| | |||||||||||||||    
T  19216061 gacctaggacctacccgtactaacttcaacttaggaactcctagatttgagatcccatctcact 19216124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 21706518 - 21706334
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    |||||||||||||| ||||||||||||||||||  | | ||||| || | | | ||||  |||||| ||||||||||||||||  | || |||| |||||    
T  21706518 ttgttaacccagtttggtgacaaacacacctacgtccgggggct-cctagctaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaa 21706420  T
Q  627 ctccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctag--atctaagatcccatctcacta 710  Q
    ||||  ||||| | || || ||||||||||||||| || | ||  |||||||||||||||||||  |||| ||||||||||||||||    
T  21706419 ctcctcgtttaca-ctatatgacctaggacctacccgtctagatatcaacctaggaactcctagatatctgagatcccatctcacta 21706334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 19100008 - 19100071
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||| |||| |||| || ||||||||||||||| ||| |||| ||||||||||||||||    
T  19100008 gacctaggac-tacccgtatagacttcaacctaggaacttctacatctgagatcccatctcacta 19100071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 391 - 727
Target Start/End: Complemental strand, 10198560 - 10198222
Alignment:
Q  391 tagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttag-aacgtcgtgctaacagaaataaataaaa- 488  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||     
T  10198560 tagctttcacatgttctatgtgatgttccaacaccagacagaaaatacgaatgatgaatgtaatgtttaggaacatcgtgctaacagaaataaataaaac 10198461  T
Q  489 --tgcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaagg 586  Q
      | ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  |||||||||| ||| |||||    
T  10198460 aatacaaacgtaaaagacaagaaagtaaagtgcacaggaggattgttaacctagttcggtgacaaacacacctactcta-gggctaccaagccaggaagg 10198362  T
Q  587 taatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcc 686  Q
     ||||||  ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||| || |||| |||||||||||||||||    
T  10198361 aaatccaccagtgtagtccttattctaagttctcagcaaactccaagtttacaactctagacctaggacctacccgtcttgacttcaacctaggaactcc 10198262  T
Q  687 tagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    ||||||| ||||| ||||||||| ||  |||||||||||||    
T  10198261 tagatctgagatctcatctcacttcc-gtcaatcaatcaca 10198222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 508 - 727
Target Start/End: Original strand, 50907821 - 50908039
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    ||||||||| |||||   || |||||||| |||||||||||||||||||||||| ||| ||||||||||  || ||||  |||||| |||||||||||||    
T  50907821 aaagtaaaaggcacatatggtttgttaactcagttcggtgacaaacacacctactctgagggctaccaagtcaggaagaaaatccactagtgtagtcctt 50907920  T
Q  608 attataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    ||| |||||| || |||||||||  ||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||| |||| |||    
T  50907921 attctaagttatcagcaaactcctcgtttacaactctagacctaggacctacccgtattgacttcaacctaggaactcctaaatctgagattccatttca 50908020  T
Q  708 ctaccactcaatcaatcaca 727  Q
    || || ||||||||||||||    
T  50908021 cttcc-ctcaatcaatcaca 50908039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 496 - 727
Target Start/End: Complemental strand, 16655540 - 16655310
Alignment:
Q  496 gtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaat 595  Q
    |||||||| |||||||||||| ||||||||| |||||||||| ||||| | || |||||||||||| ||  |||||| ||| ||||||||| |||||| |    
T  16655540 gtaaaagacaagaaagtaaaaggcacaggagaattgttaacctagttcagcgataaacacacctactctaggggctaacaagccaagaaggaaatccact 16655441  T
Q  596 agtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    || |||||||||||| ||||||||| |||||||||    |||  ||| |||||||||||||||||  | |||| |||||||||||||||||||||||| |    
T  16655440 agggtagtccttattctaagttctcagcaaactccttagttacgactttagacctaggacctacccatcttgagttcaacctaggaactcctagatctga 16655341  T
Q  696 gatcccatctcactaccactcaatcaatcaca 727  Q
    ||||||||||||||  | ||||||||||||||    
T  16655340 gatcccatctcacttgc-ctcaatcaatcaca 16655310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 401 - 710
Target Start/End: Original strand, 19659299 - 19659611
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaa---taaataaaat-gcaaacg 496  Q
    ||||| |||| |||||||||||||||  ||||||  ||| ||||||||||  ||||||||||| |||||||| ||| ||   |||| ||||  |||||      
T  19659299 atgttatatgcgatgttccaacaccaggcacaaataacagatgttgaatgagatgtttagaacatcgtgctagcagtaaacgtaaacaaaacagcaaaa- 19659397  T
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||| ||||| |||||||| | || || ||||| ||||||||||||||||||||  ||| |||| ||||| ||| ||||| |||||| ||    
T  19659398 taaaagacaagaaattaaaaggcacaggaag-ttattgacccaattcggtgacaaacacacctaagctgggggccaccaagccaggaaggaaatccacta 19659496  T
Q  597 gtgtagtccttatt-ataagttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatcta 694  Q
    |||||||||||||| | ||| |||| |||||||||  |||||  ||| || |||||||||||||| ||| | || ||||||||||||||||||||||||     
T  19659497 gtgtagtccttattcaaaagctctcagcaaactcctcgttta-cactttatgacctaggacctacatgtttagacttcaacctaggaactcctagatctg 19659595  T
Q  695 agatcccatctcacta 710  Q
    ||||||||||||||||    
T  19659596 agatcccatctcacta 19659611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 15700480 - 15700298
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacact-gcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    ||||| ||||||||||||||||||||||||||| || | |||||||||| ||| ||||| |||||| |||||||||||||||| || || | || |||||    
T  15700480 ttgttgacccagttcggtgacaaacacacctactcttgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctttcagcaaa 15700381  T
Q  627 ctccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||  ||||| | ||  ||||||||||||||||  |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15700380 ctcctcgtttaca-ctaaagacctaggacctacccatattgatttcaacctaggaactcctagatctcagatcccatctcacta 15700298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 9068904 - 9069117
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| | |||  | | |||||||||||||||||| |||||||||||||| |||  ||||||||| | | ||||| |||||| ||    
T  9068904 taaaagacaagaaagtaaaaggaacatcaagtttgttaacccagttcggtaacaaacacacctactctggaggctaccaagcgaggaaggaaatccacta 9069003  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||| ||  | |||| |||||||||  |||||  |||  ||| |||||||||||| ||||||| ||||| |||||||||||||||||| |    
T  9069004 gtgtagtccttattctattgctctcagcaaactcctcgttta-cactaaagatctaggacctacccgtattgatttcaatctaggaactcctagatctga 9069102  T
Q  696 gatcccatctcacta 710  Q
    |||| ||||||||||    
T  9069103 gatctcatctcacta 9069117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 13399472 - 13399291
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattat-aagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||  |||||||||| ||| ||||  |||||| |||||||||||||||| | ||| |||| ||||||    
T  13399472 ttgttgacccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaatccactagtgtagtccttattctaaagctctcagcaaac 13399373  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  |||| ||||||||||| || | || |||||||||||||||||||||||| |||| |||||||||||    
T  13399372 tcctcgttta-cacttaagacttaggacctacccgtctagatttcaacctaggaactcctagatctgagattccatctcacta 13399291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 506 - 721
Target Start/End: Original strand, 2679817 - 2680028
Alignment:
Q  506 agaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcc 605  Q
    ||||||||||| |||||  ||  ||||||||||||| ||||||||||||||||||| ||| |||| |||||   | ||||| |||||| || ||||||||    
T  2679817 agaaagtaaaaagcacaaaagatttgttaacccagtacggtgacaaacacacctactctgggggcaaccaagttaggaaggaaatccactattgtagtcc 2679916  T
Q  606 ttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatct 705  Q
    || || ||||||||| |||||||||||||||   ||| |  || ||||||||||  ||| ||| |||||||||||| ||||||||||| ||||| |||||    
T  2679917 ttgttctaagttctcagcaaactccaagttt---actat-cacataggacctactcgtactgacttcaacctaggagctcctagatctgagatctcatct 2680012  T
Q  706 cactaccactcaatca 721  Q
    | || |||||||||||    
T  2680013 ctcttccactcaatca 2680028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 535 - 710
Target Start/End: Original strand, 25116820 - 25116998
Alignment:
Q  535 acccagttcggtgacaaacacacctacactgcgggctac--caaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactcca 631  Q
    ||||||||||||||||||||||||||| ||| |||||||  ||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||| |     
T  25116820 acccagttcggtgacaaacacacctactctgggggctacaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaacttct 25116919  T
Q  632 agtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  25116920 cgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 25116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 33745922 - 33746135
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| |||||  | | |||||||| ||||||||||||||| ||||||||  ||  ||||||||| | | ||||| |||||| ||    
T  33745922 taaaagacaagaaagtaaaaggcacaacaagtttgttaacacagttcggtgacaaaaacacctactatggaggctaccaagctaggaaggaaatccacta 33746021  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||| || || |||| | ||| |||  |||||  |||  |||||||||||||||| ||||| | ||||||||||||||| |||||||| |    
T  33746022 gtgtagtccttattttatagctctcagtaaattcctcgttta-cactaaagacctaggacctacccgtattaatttcaacctaggaacttctagatctga 33746120  T
Q  696 gatcccatctcacta 710  Q
    |||| ||||||||||    
T  33746121 gatctcatctcacta 33746135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 537 - 709
Target Start/End: Original strand, 32861646 - 32861819
Alignment:
Q  537 ccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattat-aagttctcggcaaactccaagtt 635  Q
    ||||||||||||||||||||||||| ||  ||||||||||  || ||||  |||||| |||||||||||||||| | ||||||||  ||||||||  |||    
T  32861646 ccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactagtgtagtccttattctaaagttctcaacaaactcctcgtt 32861745  T
Q  636 tagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    || ||||  |||||||||||||||  || | || |||||||||||||||||||||| | |||||| ||||||||    
T  32861746 tataacttaagacctaggacctactcgtctagacttcaacctaggaactcctagatttgagatcctatctcact 32861819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 527 - 699
Target Start/End: Original strand, 16383879 - 16384052
Alignment:
Q  527 gattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaa 625  Q
    ||||||| ||| ||||||||||||||||||||||| ||| ||||| |||| ||| ||||| |||||| |||||||||||||||| |  || ||||  |||    
T  16383879 gattgttgacctagttcggtgacaaacacacctactctgggggcttccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaa 16383978  T
Q  626 actccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatc 699  Q
    |||||  |||||  ||| || ||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  16383979 actcctcgttta-cactatatgacctaggacctacccgtattaacttcaacctatgaactcctagatctaagatc 16384052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 23400357 - 23400181
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||      |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  23400357 ttgttgacctagttcggtgacaaacacaccta------gggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 23400264  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| | ||||||||||||||    
T  23400263 tcctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgatatcccatctcacta 23400181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 529 - 707
Target Start/End: Original strand, 28019295 - 28019474
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||| | | ||| |||||||||| ||||||||| |||||| |||||||||||||||| |  || |||| ||||||    
T  28019295 ttgttgacccagttcggtgacaaacacacatgctctgggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 28019394  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    |||  |||||  ||| || |||||||||| |||| |||| || ||||||||||||||||||| || |  ||||||||||||    
T  28019395 tcctcgttta-cactatatgacctaggacatacccgtatagacttcaacctaggaactcctatatttgtgatcccatctca 28019474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 505 - 727
Target Start/End: Original strand, 41785401 - 41785622
Alignment:
Q  505 aagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtc 604  Q
    |||||||||||||||| ||   | ||||| ||||||||| ||||||||||||| |||   | |||||||||| ||||||||| |||||| ||||||||||    
T  41785401 aagaaagtaaaatgcatagagagtttgttgacccagttctgtgacaaacacacatactacgggggctaccaagccaagaaggaaatccactagtgtagtc 41785500  T
Q  605 cttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccat 703  Q
    | |||| | |||||||| |||||  ||| ||||| ||||  |||  ||| |||||||||| | || |||||||||||||||| || |||| | |||||||    
T  41785501 cctattctaaagttctcagcaaa--ccacgtttacaacttaagatatagaacctacctgtttagatttcaacctaggaactcttatatctgatatcccat 41785598  T
Q  704 ctcactaccactcaatcaatcaca 727  Q
    ||||||| |   ||||||||||||    
T  41785599 ctcactatcttacaatcaatcaca 41785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 21478099 - 21478280
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| |||  ||||||||| ||| ||||| ||| || |||||||||||||||| | ||| |||| ||||||    
T  21478099 ttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagccaggaaggaaatacactagtgtagtccttattcaaaagctctcagcaaac 21478197  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| || | || |||||||||||||||||||||||| ||||||||||||||||    
T  21478198 tcctcgtttaca-ctttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcacta 21478280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 10724250 - 10724431
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| |||||||||||||||||||||||  || ||||||| || ||| ||||| ||| || |||||||||||||||| || || |||| ||||||    
T  10724250 ttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctctcagcaaac 10724349  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| |  |  |||||||  ||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  10724350 tcctcatttacat-taaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 10724431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 10938019 - 10938200
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| |||||||||||||||||||||||  || ||||||| || ||| ||||| ||| || |||||||||||||||| || || |||| ||||||    
T  10938019 ttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctctcagcaaac 10938118  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| |  |  |||||||  ||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  10938119 tcctcatttacat-taaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 10938200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 10190877 - 10191059
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| ||||||  ||||||||||||||| |  || |||  ||||||    
T  10190877 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaccagtgtagtccttattcaatagctctaagcaaac 10190976  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||| |||||| |||  |||| || |||||||||| ||||||||||||| |||| |||||||||||    
T  10190977 tcctcgttta-cactatatgacataggacttactcgtatagacttcaacctagaaactcctagatctgagattccatctcacta 10191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 529 - 707
Target Start/End: Complemental strand, 15162656 - 15162478
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||| |||| ||||||||| |||||| |||||||||||||||| || |  ||||  |||||    
T  15162656 ttgttgacctagttcggtgacaaacacacctactctgggggctgccaacccaagaaggaaatccactagtgtagtccttattctataactctcaacaaac 15162557  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    ||   |||||  |||  ||||| || ||||||| ||||  | |||||||||||||||||| ||| | |||||||||||||    
T  15162556 tcttcgttta-cactaaagaccgagaacctacccgtataaacttcaacctaggaactcctcgatttgagatcccatctca 15162478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 571 - 710
Target Start/End: Original strand, 10722016 - 10722155
Alignment:
Q  571 taccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaa 669  Q
    |||||| ||| ||||| |||| | |||||||||||||||| ||| | ||||  ||||||||  ||||| | ||  |||||||||||||||| |||| ||     
T  10722016 taccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaacaaactcctcgtttaca-cttaagacctaggacctacccgtatagac 10722114  T
Q  670 ttcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  10722115 ttcaacctaggaactcctagatctgagatctcatctcacta 10722155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 571 - 710
Target Start/End: Original strand, 10935785 - 10935924
Alignment:
Q  571 taccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaa 669  Q
    |||||| ||| ||||| |||| | |||||||||||||||| ||| | ||||  ||||||||  ||||| | ||  |||||||||||||||| |||| ||     
T  10935785 taccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaacaaactcctcgtttaca-cttaagacctaggacctacccgtatagac 10935883  T
Q  670 ttcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  10935884 ttcaacctaggaactcctagatctgagatctcatctcacta 10935924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 22554961 - 22555142
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| |||  ||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  22554961 ttgttaacccagttcggtg-caacgtcacctactctgaaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 22555059  T
Q  628 tccaagtttagaactcta--gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  || | | ||| ||  ||||||||||||| | ||| ||| |||||||||||||||| ||||||| |||||||||||||||    
T  22555060 tcctcgtat-gcactatatggacctaggacctatccgtactgacttcaacctaggaactcgtagatctgagatcccatctcact 22555142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 542 - 710
Target Start/End: Complemental strand, 18618272 - 18618103
Alignment:
Q  542 tcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaactccaagtttagaa 640  Q
    ||||||||||||| |||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| |  |  ||||  ||||||||  |||||  |    
T  18618272 tcggtgacaaacatacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactcctcgttta-ca 18618174  T
Q  641 ctcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    || || |||||||||| |||| || | || ||||||||||| ||| |||||||| ||||||||||||||||    
T  18618173 ctatatgacctaggacatacccgtctagacttcaacctagggactactagatctgagatcccatctcacta 18618103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 25354803 - 25354624
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagt-tctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||||||| ||| ||||| |||||| ||||||||| | ||||  |  | |||| ||||||    
T  25354803 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagttcgtattcaatatctctcagcaaac 25354705  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||||||||| | ||||| |||||||||    
T  25354704 tccttgttt-gcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatttgagatcacatctcact 25354624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 8163893 - 8163957
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| || | || |||||||||||||||||||||||| ||||||||||||||||    
T  8163893 gacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcacta 8163957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 645 - 705
Target Start/End: Original strand, 11905200 - 11905260
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatct 705  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  11905200 agacctatgacttacctgtattgacttcaacctaggaactcctagatcttagatcccatct 11905260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 33737974 - 33738050
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcc 605  Q
    |||||||||||||||||||||||||||||||||  ||  ||||||||| ||| ||||| |||||| |||||||||||    
T  33737974 ttgttaacccagttcggtgacaaacacacctactatggaggctaccaagccaggaaggaaatccactagtgtagtcc 33738050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 709
Target Start/End: Complemental strand, 11325275 - 11325133
Alignment:
Q  568 ggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtat 665  Q
    ||||||||| ||| ||||| |||||| ||||||||||||||||  | || ||||  ||||||||  |||| | ||| || ||||||||||||||| |||     
T  11325275 ggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgttt-gcactatatgacctaggacctacccgtac 11325177  T
Q  666 tgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    | | |||||||||||||||| |||||||||||| ||||||||||    
T  11325176 taacttcaacctaggaactcgtagatctaagattccatctcact 11325133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 33899157 - 33898975
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||  ||||||||||  || ||||  |||||| | |||||||||| |||  | || |||  ||||||    
T  33899157 ttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactggtgtagtcctcattcaatagctcttagcaaac 33899058  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    | |  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||| | | ||||| ||||||||||    
T  33899057 ttctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctaggtttgagatctcatctcacta 33898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 23541235 - 23541414
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| |||  ||||||||| ||| ||||| |||||| ||||||||||| |||| |  || |||| ||||||    
T  23541235 ttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaac 23541333  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| | |||  |||||||||||||||| ||| ||| |||||||  |||||  |||||||| ||||| |||||||||    
T  23541334 tcctcgttt-gcactaaagacctaggacctacccgtactgacttcaacccgggaacaactagatctgagatctcatctcact 23541414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 24143126 - 24143305
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||| ||||||||| |||   ||||||| ||| ||||||||||  || ||||| |||||| ||||||||||| ||||  | || |||| |||||     
T  24143126 ttgttaacctagttcggtg-caacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaaa 24143224  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| | |||   ||||||||||||||| ||| ||| || |||||| |||||||||||||| |||||||||||||||    
T  24143225 tcctcgttt-gcactaatgacctaggacctacccgtactgactttaacctatgaactcctagatctgagatcccatctcact 24143305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 529 - 684
Target Start/End: Complemental strand, 46741917 - 46741763
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||| ||||||| |||   ||||||| ||| |||||||||| ||| ||||| |||||| ||||||| ||||||||  | || |||| ||||||    
T  46741917 ttgttaacccatttcggtg-caacgtcacctactctgggggctaccaagccatgaaggaaatccactagtgtaatccttattcaatagctctcagcaaac 46741819  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaact 684  Q
    |||  |||| | |||   ||||||||||||||| ||||||| |||||||||||||||    
T  46741818 tcctcgttt-gcacttatgacctaggacctacccgtattgacttcaacctaggaact 46741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 709
Target Start/End: Complemental strand, 19894855 - 19894792
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| ||| |||||||||| |||||||| |||| |||||||||||||||    
T  19894855 gacctaggacctacccgtactgacttcaacctagaaactcctaaatctgagatcccatctcact 19894792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 645 - 710
Target Start/End: Complemental strand, 19183733 - 19183668
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||| | | || | || |||||||||||||||||||||||| ||||||||||||||||    
T  19183733 agacctaggacccatccgtctagatttcaacctaggaactcctagatctgagatcccatctcacta 19183668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 727
Target Start/End: Original strand, 15622573 - 15622630
Alignment:
Q  670 ttcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||| ||||||||||||||||||| |||||||||||||||| |   ||||||||||||    
T  15622573 ttcatcctaggaactcctagatctgagatcccatctcactatcctacaatcaatcaca 15622630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 574
Target Start/End: Complemental strand, 26245033 - 26244988
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctacc 574  Q
    |||||||||||||||||||| |||||||||||| |||  |||||||    
T  26245033 ttgttaacccagttcggtgaaaaacacacctactctggaggctacc 26244988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 1e-80; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 395 - 727
Target Start/End: Original strand, 24117449 - 24117784
Alignment:
Q  395 tttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaa--tgca 492  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| | | ||||||| ||||||| ||||  ||||    
T  24117449 tttcagatgttctacgtgatgttccaacaccatacacaaaatacgaatgttgaatgtaatatttagaacattgcgctaacaaaaataaacaaaagatgca 24117548  T
Q  493 aa-cgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatc 591  Q
    || ||||||||| || ||||||| | |||||| || |||||||||||||||||||||||||||| ||||| |||  ||||||||| ||| ||| | ||||    
T  24117549 aaacgtaaaagacaaaaaagtaacaggcacagaagaattgttaacccagttcggtgacaaacacgcctactctggtggctaccaagccaggaatgaaatc 24117648  T
Q  592 caatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagat 691  Q
    || |||||||||||||||| ||| ||||| |||||| |  |||||| ||||  |||||||||||||||| ||||||| || |||||||||| | || |||    
T  24117649 cactagtgtagtccttattgtaaattctcagcaaaccctcagtttacaacttcagacctaggacctacccgtattgactttaacctaggaatttcttgat 24117748  T
Q  692 ctaagatcccatctcactaccactcaatcaatcaca 727  Q
    || ||||||||||||||| |||||||||||||||||    
T  24117749 ctgagatcccatctcacttccactcaatcaatcaca 24117784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 505 - 730
Target Start/End: Complemental strand, 13942190 - 13941964
Alignment:
Q  505 aagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtc 604  Q
    |||||||||||  ||||| |||  ||||||||| ||||||||||||||||||||||| ||| ||||||||||  || ||||| |||||| ||||||||||    
T  13942190 aagaaagtaaatggcacatgagagttgttaacctagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtc 13942091  T
Q  605 cttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccat 703  Q
    |||||| | |||||||| |||||||||  ||||| ||||  | |||||||||||||| || |  | |||||||||||||||||||||||| |||||||||    
T  13942090 cttattctaaagttctcagcaaactcctcgtttacaacttaaaacctaggacctacccgtctacacttcaacctaggaactcctagatctgagatcccat 13941991  T
Q  704 ctcactaccactcaatcaatcacaacc 730  Q
    |||| || |   |||||||||||||||    
T  13941990 ctcattatcctacaatcaatcacaacc 13941964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 509 - 721
Target Start/End: Complemental strand, 17661598 - 17661387
Alignment:
Q  509 aagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctta 608  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||||  || |||||||||| ||  ||||| ||| || |||||| ||||||     
T  17661598 aagtaaaatgcataggagt-ttgttaacccagttcggtgacaaacacacctactatgggggctaccaagcctggaaggaaattcactagtgttgtccttg 17661500  T
Q  609 ttataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcac 708  Q
    || ||||||||| ||||| ||||| || | ||||    ||||||||||||||  |||||| |||||||||||||||||||||||| |||| |||||||||    
T  17661499 ttctaagttctcagcaaattccaaattcacaacttataacctaggacctacccatattgacttcaacctaggaactcctagatctgagattccatctcac 17661400  T
Q  709 taccactcaatca 721  Q
    | |||||||||||    
T  17661399 ttccactcaatca 17661387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 529 - 727
Target Start/End: Complemental strand, 20714905 - 20714706
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||||||||  || | ||| |||||| |||||||||||||||| ||| |||||| ||||||    
T  20714905 ttgttgacctagttcggtgacaaacacacctactctgagggctaccaagtcaggtaggaaatccactagtgtagtccttattctaatgttctcagcaaac 20714806  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||  ||||| ||| | |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||  |||||||||| |   ||||||||||||    
T  20714805 tcctcgtttacaacacaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatttcatctcactatcctacaatcaatcaca 20714706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 513 - 730
Target Start/End: Original strand, 22979720 - 22979938
Alignment:
Q  513 aaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattat 612  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||  || |||||||||| | | ||||  ||| || ||||||||||||| || |    
T  22979720 aaaaggcacagttggattgttaacccagttcggtgacaaacacacctactatg-gggctaccaagcaaggaagcaaatacactagtgtagtccttgttct 22979818  T
Q  613 aagttctcggcaaa--ctccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||| |||||  ||||||||||| ||||    ||||| ||| | || ||||||| |||||||||||||||| ||||||| ||||| |||||||||     
T  22979819 aagttctcagcaaatactccaagtttacaacttatcacctaagacttgcccgtattgacttcaacctaggaactcttagatctgagatctcatctcactt 22979918  T
Q  711 ccactcaatcaatcacaacc 730  Q
    ||||||||||||||||||||    
T  22979919 ccactcaatcaatcacaacc 22979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 26329382 - 26329201
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||||| |||||||||||| ||| | |||||||| ||| ||||| |||||| | |||||||||||||| || || |||| ||||||    
T  26329382 ttgttgacccagttcggtgataaacacacctactctgtgagctaccaagccaggaaggaaatccactggtgtagtccttattctatagctctcagcaaac 26329283  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26329282 tcctcgtttaca-ctaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcacta 26329201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 30605859 - 30605678
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| |||||| ||||| |||||||||| || || |||| ||||||    
T  30605859 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaatccaggaaggaaatccactagtgcagtccttattctatagctctcagcaaac 30605760  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  ||||||||||||||||  |||||| ||||| |||||||||||||||||| ||||| ||||||||||    
T  30605759 tcctcgttta-cactaaagacctaggacctacccatattgatttcaatctaggaactcctagatctgagatctcatctcacta 30605678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 13735142 - 13734960
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||| ||||||||||||||||||||| ||| ||| ||||||  || ||||| |||||| |||||||||||||||| | ||| |||| ||||||    
T  13735142 ttgttgacccacttcggtgacaaacacacctactctgggggttaccaagtcaggaaggaaatccattagtgtagtccttattcaaaagctctcagcaaac 13735043  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| || | || |||||||||||||||||||||||| ||||||||||||||||    
T  13735042 tcctcgtttaca-ctttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcacta 13734960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 22404930 - 22404748
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||| | ||  |||||||||| ||| ||||| |||||| |||| |||||||||||  | || |||| ||||||    
T  22404930 ttgttgacccagttcggtgacaaacacacctgctctaggggctaccaagccaggaaggaaatccactagtatagtccttattcaatagctctcagcaaac 22404831  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  22404830 tcctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 22404748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 13338583 - 13338763
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||| ||| ||||| |||||| ||||||| |||||||| || |  |||| ||||||    
T  13338583 ttgttaacccagttcggtgacaaacacacatactctg-gggctaccaagccaggaaggaaatccactagtgtaatccttattctataactctcagcaaac 13338681  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  ||||||||||| |||| ||||||| ||| |||||||||||||||||||| ||||| ||||||||||    
T  13338682 tcctcgttta-cactaaagacctaggacataccggtattgatttctacctaggaactcctagatctgagatctcatctcacta 13338763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 537 - 710
Target Start/End: Original strand, 18221109 - 18221282
Alignment:
Q  537 ccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtt 635  Q
    |||||||||||||||||||||||||  || || ||||||| ||||||||| |||||| ||||||||||||||||  | || ||||  |||||| |  |||    
T  18221109 ccagttcggtgacaaacacacctactttggggtctaccaagccaagaaggaaatccactagtgtagtccttattccatagctctcaccaaacttctcgtt 18221208  T
Q  636 tagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    || | ||  |||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  18221209 taca-ctaaagacctaggagctaccagtattgagttcaacctaggaactcctagatctgagatcccatctcacta 18221282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 569 - 730
Target Start/End: Original strand, 20127026 - 20127186
Alignment:
Q  569 gctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattga 668  Q
    |||||||| | | ||||| |||||| ||||||| |||||||| ||||||||| |||||||||  ||||| ||||||| |||||||||||||| || ||||    
T  20127026 gctaccaatctaggaaggaaatccactagtgtaatccttattctaagttctcagcaaactcctcgtttacaactctaaacctaggacctacccgtcttga 20127125  T
Q  669 attcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
     ||||||| | ||||| ||||||||  |||||||||||||| || |||||||||| ||||||    
T  20127126 cttcaacccatgaacttctagatcttggatcccatctcacttcc-ctcaatcaattacaacc 20127186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 26036801 - 26036982
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||||  |||||||||||| ||| |||||||||| ||| ||||| |||||| |||||| ||||||||| || || |||| ||||||    
T  26036801 ttgttgacccagttcggtggaaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgttgtccttattctatagctctcagcaaac 26036900  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||   |||||  |||  |||||||||||||||| |||| || |||||||||||||||  ||||||| ||||||||| ||||||    
T  26036901 tcatcgttta-cactaaagacctaggacctacccgtatagacttcaacctaggaacttgtagatctgagatcccatttcacta 26036982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 24189853 - 24190035
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||| ||| ||| |||||||||| ||  ||||| ||| || |||||||||| |||||  | || |||| ||||||    
T  24189853 ttgttgacctagttcggtgacaaacacacatactctgggggctaccaagccgggaaggaaattcactagtgtagtctttattcaatagctctcagcaaac 24189952  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||| ||||||| ||||||||||||||||    
T  24189953 tcctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcatagatctgagatcccatctcacta 24190035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 7898082 - 7897903
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| |||  ||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  7898082 ttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 7897984  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||| ||||||| |||||||||||||||    
T  7897983 tcctcgttt-gcactaatgacctaggacctacccgtactgacttcaacctaggaactcttagatctgagatcccatctcact 7897903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 529 - 705
Target Start/End: Complemental strand, 17920951 - 17920776
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||  |||||||||| ||| ||||| |||||| ||||||||||| |||| | ||| |||| ||||||    
T  17920951 ttgttaacccagttcggtg-caacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaaaagctctcagcaaac 17920853  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatct 705  Q
    |||  |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||    
T  17920852 tcctcgttt-gcacttatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatct 17920776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 535 - 710
Target Start/End: Complemental strand, 23420724 - 23420548
Alignment:
Q  535 acccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaag 633  Q
    |||||||||||||||||| |||||||| ||  |||||||||| | | ||||| |||||| ||||||||||||||||  | || |||| |||||||||       
T  23420724 acccagttcggtgacaaatacacctactctaagggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctca 23420625  T
Q  634 tttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||| | || || ||||||||||||||| |||| || |||||||||||||||  ||||||| ||||||||||||||||    
T  23420624 tttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactgttagatctgagatcccatctcacta 23420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 567 - 730
Target Start/End: Original strand, 9522564 - 9522725
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtat- 665  Q
    ||||||||||  |||||||| ||| || |||||||||||||||| |||||| ||  ||||||||   |||| ||     ||||||||||||||| ||||     
T  9522564 gggctaccaagtcaagaaggaaattcactagtgtagtccttattctaagttatcaacaaactcctcttttacaa-----gacctaggacctacccgtata 9522658  T
Q  666 ---tgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
       ||| |||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  9522659 tattgacttcaacctaggaactcctagatctgagatcccatctcacttcc-ctcaatcaatcacaacc 9522725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 26183402 - 26183222
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||||||| ||| ||||| ||| || ||||||||||||||||  | || |||| ||||||    
T  26183402 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatacactagtgtagtccttattcaatagctctcagcaaac 26183304  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    | |  |||| | ||| || ||||||| ||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  26183303 ttctcgttt-gcactatatgacctagaacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 26183222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 541 - 709
Target Start/End: Original strand, 23623880 - 23624048
Alignment:
Q  541 ttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttaga 639  Q
    ||||||||||||||||||||| ||| ||||||| || | | ||||| |||||| |||||||||| ||||| || || |||| |||||||||   |||| |    
T  23623880 ttcggtgacaaacacacctactctgggggctactaacctaggaaggaaatccactagtgtagtcgttattctatagctctcagcaaactcctcatttaca 23623979  T
Q  640 actctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
     ||  | |||||||||||||| ||||||| |||||||||||||||| ||||| | ||||| |||||||||    
T  23623980 -ctaaatacctaggacctacccgtattgatttcaacctaggaactcttagatttgagatctcatctcact 23624048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 597 - 727
Target Start/End: Complemental strand, 11756305 - 11756179
Alignment:
Q  597 gtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaag 696  Q
    ||||| || ||||| |||||||||  |||| |||   |||| |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||   |    
T  11756305 gtgtattcattattctaagttctcaacaaattcctcatttacaactctagacctaggacctacccgtattgacttcaacctaggaactcttagatc---g 11756209  T
Q  697 atcccatctcactaccactcaatcaatcaca 727  Q
    ||||||||||||| || ||||||||||||||    
T  11756208 atcccatctcacttcc-ctcaatcaatcaca 11756179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 20498321 - 20498141
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| |||  |||||||||  || ||||| |||||| | ||||||||||||||  | || |||| ||||||    
T  20498321 ttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagtcaggaaggaaatccactcgtgtagtccttattcaatagctctcagcaaac 20498223  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| | ||| || ||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||    
T  20498222 tcctcgttt-gcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 20498141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 567 - 710
Target Start/End: Complemental strand, 22184728 - 22184585
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaactccaagtttagaactctagacctaggacctacctgtat 665  Q
    |||||||||| ||| ||||| |||||| |||| ||||||  ||| ||| | |||| |||||||||  ||||| | ||  ||||||| |||||||| | ||    
T  22184728 gggctaccaagccaggaaggaaatccattagtctagtccgaattctaaagctctcagcaaactcctcgtttaca-cttaagacctatgacctacccgcat 22184630  T
Q  666 tgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||    
T  22184629 tgatttcaacctaggaactcctagatctgagatcccatctcacta 22184585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 555 - 709
Target Start/End: Complemental strand, 20741079 - 20740925
Alignment:
Q  555 cacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctagg 653  Q
    ||||||| ||| |||||||||| | | || || |||||| |||||||||||||||| |  || |||| |||||||||  ||||| | ||  |||||||||    
T  20741079 cacctactctgggggctaccaagcgaggagggaaatccactagtgtagtccttattctctagctctcagcaaactcctcgtttaca-ctaaagacctagg 20740981  T
Q  654 acctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||| | || |||| |||||||||||||||||||||||| ||||| |||||||||    
T  20740980 acctatccgtcttgacttcaacctaggaactcctagatctgagatctcatctcact 20740925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 20845962 - 20845781
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagt-tctcggcaaac 627  Q
    ||||||||||||||||||| |||   |||||||  || ||||||||||  || ||||| |||||| ||||||||||||||||  || | |||| ||||||    
T  20845962 ttgttaacccagttcggtg-caacgtcacctactatgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaaaatctctcagcaaac 20845864  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| || | || |||||||||||||||||||||||| |||||  |||||||||    
T  20845863 tcctcgtttaca-ctttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcttatctcacta 20845781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 710
Target Start/End: Complemental strand, 22246478 - 22246338
Alignment:
Q  571 taccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaa 669  Q
    |||||| ||| ||||| |||||| ||||||||||||||||  | || |||| |||||||||  ||||| |    | ||||||||||||||| |||| ||     
T  22246478 taccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatttgacctaggacctacccgtatagac 22246379  T
Q  670 ttcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||||||||||||||  ||||| ||||||||||    
T  22246378 ttcaacctaggaactcctagatcatagatcacatctcacta 22246338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 707
Target Start/End: Complemental strand, 22252092 - 22252031
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    ||||||||||||||| |||| || |||||||||||||||||||||||| |||||| ||||||    
T  22252092 gacctaggacctacccgtatagacttcaacctaggaactcctagatcttagatcctatctca 22252031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 610
Target Start/End: Complemental strand, 25105589 - 25105508
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||| ||||||||||||||||| | ||||||||||  ||||||||||  || ||||| |||||| ||||||||||||||||    
T  25105589 ttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttatt 25105508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 610
Target Start/End: Complemental strand, 25164682 - 25164601
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||| ||||||||||||||||| | ||||||||||  ||||||||||  || ||||| |||||| ||||||||||||||||    
T  25164682 ttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttatt 25164601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 610
Target Start/End: Complemental strand, 22131105 - 22130922
Alignment:
Q  428 acacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaa---taaataaaat-gcaaacgtaaaagataagaaagtaaaatgcacag 523  Q
    ||||||| |||| ||||||||||  ||||||||||| |||||||| ||| ||   |||| ||||  |||||  ||||||| |||||||||||| ||||||    
T  22131105 acacaaattacagatgttgaatgagatgtttagaacatcgtgctagcagtaaacataaacaaaacagcaaaa-taaaagacaagaaagtaaaaagcacag 22131007  T
Q  524 gaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
       | ||||||||||||||||||| |||   ||||||| ||| |||||||||| || || ||| |||||| ||||||| ||||||||    
T  22131006 agagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagcc-aggaggaaatccactagtgtaatccttatt 22130922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 710
Target Start/End: Complemental strand, 9422544 - 9422504
Alignment:
Q  670 ttcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  9422544 ttcaacctatgaactcctagatctgagatcccatctcacta 9422504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 709
Target Start/End: Complemental strand, 22130876 - 22130837
Alignment:
Q  670 ttcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  22130876 ttcaacctagaaactcctagatctgagatcccatctcact 22130837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 4e-68; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 375 - 727
Target Start/End: Complemental strand, 17379942 - 17379593
Alignment:
Q  375 tgaaactctggcatgttagctttcagatgttctatgtgatgttccaacaccaaacaca-aaatacaaatgttgaatgtaatgtttagaacgtcgtgct-a 472  Q
    ||||| ||| ||| ||||| ||| |||||||||||| ||||||||||||||| ||||| ||| || |||||||| | ||||||||| ||| |||| || |    
T  17379942 tgaaattctagcacgttagttttaagatgttctatgcgatgttccaacaccagacacacaaaaacgaatgttgagtttaatgttta-aacatcgtactta 17379844  T
Q  473 acagaaataaataaaatgcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggcta 572  Q
    ||  | |||||  | | | ||| ||| | || |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  17379843 actaacataaa--atacgtaaatgtaga-gacaagaaaataaaaggcacaggagaattgttaacccagttcggtgacaaacacacctactctgggggcta 17379747  T
Q  573 ccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattc 672  Q
    |||| ||| ||||| |||||| |||||||||||||||| ||| ||||| |||||||||  ||||| |||||||||||||||||||||| || |||| |||    
T  17379746 ccaagccaggaaggaaatccactagtgtagtccttattctaatttctcagcaaactcctcgtttacaactctagacctaggacctacccgtcttgacttc 17379647  T
Q  673 aacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    ||||||| ||||||||||||| ||||||||||||||| || ||||||||||||||    
T  17379646 aacctagaaactcctagatctgagatcccatctcacttcc-ctcaatcaatcaca 17379593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 497 - 730
Target Start/End: Complemental strand, 51472292 - 51472060
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||| ||||| ||||| ||| |||||||||||| ||| ||||||||||||| ||| ||| |||||||||||||||||||| |||||| ||    
T  51472292 taaaagacaagaaaataaaaggcacatgagaattgttaacccaattcagtgacaaacacacatactctgggggctaccaaaccaagaaggaaatccacta 51472193  T
Q  597 gtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaag 696  Q
    |||||||||||||| |||||||||  ||||||||  ||||| |||||||||||||||||||||| || || | |||||||||||||||||||||||| ||    
T  51472192 gtgtagtccttattctaagttctcatcaaactcctcgtttacaactctagacctaggacctacccgtctttatttcaacctaggaactcctagatctgag 51472093  T
Q  697 atcccatctcactaccactcaatcaatcacaacc 730  Q
    |||| |||||||| || ||||| ||| |||||||    
T  51472092 atccaatctcacttcc-ctcaaacaaccacaacc 51472060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 505 - 730
Target Start/End: Complemental strand, 17356022 - 17355798
Alignment:
Q  505 aagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtc 604  Q
    |||||| |||||  || ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||| ||  ||||| ||||||  |||||||||    
T  17356022 aagaaaataaaagtcataggagaattgttaacccagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccaccagtgtagtc 17355923  T
Q  605 cttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatc 704  Q
    |||||| ||| ||||| |||||||||  ||||| ||||||| |||||||||||||| || |||| |||||||||||||||| ||||||| ||||||||||    
T  17355922 cttattctaatttctcagcaaactcctcgtttacaactctacacctaggacctacccgtcttgacttcaacctaggaactcatagatctgagatcccatc 17355823  T
Q  705 tcactaccactcaatcaatcacaacc 730  Q
    ||||| || |||||||||||||||||    
T  17355822 tcacttcc-ctcaatcaatcacaacc 17355798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 412 - 730
Target Start/End: Original strand, 8281796 - 8282111
Alignment:
Q  412 gatgttccaacaccaaacaca-aaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaatgcaaacgtaaaagataagaaa 510  Q
    ||||||||||||||| ||||| |||||  |||||||| | ||||||||| ||| ||||||||||  ||  |||  | | | ||| |||||| | ||||||    
T  8281796 gatgttccaacaccagacacacaaatatgaatgttgagtttaatgttta-aacatcgtgctaaccaaagcaaa--atacgtaaaagtaaaacacaagaaa 8281892  T
Q  511 gtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
     ||||| || || ||| |||||||||| ||||||||||||||||||||||| | |  ||| ||||| ||| ||||| || ||| || |||||||||||||    
T  8281893 ataaaaggctcatgagaattgttaacctagttcggtgacaaacacacctactccggaggcgaccaagccaggaaggaaacccactattgtagtccttatt 8281992  T
Q  611 ataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     |||||||||  ||||||||  ||||| ||||||||||| |||||||||| || || | ||||||||||||| |||||||||| |||||||||||||||     
T  8281993 gtaagttctcaacaaactccttgtttacaactctagaccaaggacctacccgtcttaacttcaacctaggaattcctagatctgagatcccatctcactt 8282092  T
Q  711 ccactcaatcaatcacaacc 730  Q
    || |||||||||||||||||    
T  8282093 cc-ctcaatcaatcacaacc 8282111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 508 - 721
Target Start/End: Complemental strand, 18390293 - 18390080
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    ||||||||  ||||||| |  ||||||||||||||||||||||||||||||||| ||| |||||||||| |||  |||| |||||| ||||||| || ||    
T  18390293 aaagtaaatggcacaggtgatttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtaatcatt 18390194  T
Q  608 attataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
     || ||||||||| |||||||| ||||||| ||||    |||||||||| ||| ||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  18390193 gttctaagttctcagcaaactcgaagtttacaacttatcacctaggaccaacccgtattgacttcaacgtagaaactcctagatctgagatcccatctca 18390094  T
Q  708 ctaccactcaatca 721  Q
    || |||||||||||    
T  18390093 cttccactcaatca 18390080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 4246026 - 4246208
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||||||||  || ||||| |||||| |||||||||||||||| |  || |||| ||||||    
T  4246026 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagacaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 4246125  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || |||||||||||||||||||| || |||||||||||||||||||||||| |||||| |||||||||    
T  4246126 tcctcgttta-cactatatgacctaggacctacctgtatagacttcaacctaggaactcctagatctgagatcctatctcacta 4246208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 727
Target Start/End: Complemental strand, 17851540 - 17851342
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||||| || ||||||||| |||||| |||||||||||||||| || || |||| ||||||    
T  17851540 ttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaac 17851441  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||  |||||  |||  |||||||||||||| | || |  | |||||||||||||||||||||||| |||||||||||||||| | | || |||||||||    
T  17851440 tcctcgttta-cactaaagacctaggacctagccgtctacatttcaacctaggaactcctagatctgagatcccatctcactatcccacagtcaatcaca 17851342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 1973304 - 1973485
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||| ||||| ||| ||| ||||||  || ||||| |||||| |||||||||||||||| || || |||| | ||||    
T  1973304 ttgttgacccagttcggtgacaaacactcctactctgggggataccaagtcaggaaggaaatccactagtgtagtccttattctatagctctcagaaaac 1973403  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| | ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1973404 tcctcatttaca-ctaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcacta 1973485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 12753020 - 12753233
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| |||||  | | |||||||||||||||||||| |||||||||||| |||  ||||||||| ||| ||||  |||||| ||    
T  12753020 taaaagacaagaaagtaaaaggcacaacaagtttgttaacccagttcggtgagaaacacacctactctggaggctaccaagccaggaagtaaatccacta 12753119  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    | |||||||||||| || || |||| || ||||||  |||||  |||  ||||||||||||||||  |||||| |||||||||| ||||||||||||| |    
T  12753120 gcgtagtccttattctatagctctcagcgaactcctcgttta-cactaaagacctaggacctacccatattgatttcaacctagaaactcctagatctga 12753218  T
Q  696 gatcccatctcacta 710  Q
    ||| |||||||||||    
T  12753219 gattccatctcacta 12753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 26972568 - 26972385
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| |||  |||| |||||| |||||||||||||||| |  || |||| ||||||    
T  26972568 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 26972469  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattga-attcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||||||||||||||    
T  26972468 tcctcgttta-cactatatgacctaggacctacccgtatagactttcaacctaggaactcctagatctgagatcccatctcacta 26972385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 15804278 - 15804098
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaac 627  Q
    ||||||||||||||| |||||||||||||||||  || |||||||||| ||| ||||  ||| || |||||||||||||||| ||| |||||| |||||     
T  15804278 ttgttaacccagttcagtgacaaacacacctactatgggggctaccaagccaggaagaaaattcactagtgtagtccttattctaatgttctcagcaaa- 15804180  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     ||| ||||| ||| | |||||||||||||||| ||||||| |||||| || |||||||||||||| ||||| ||| ||||||    
T  15804179 -ccacgtttacaacacaagacctaggacctacccgtattgatttcaacttaagaactcctagatctgagatctcatttcacta 15804098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 505 - 707
Target Start/End: Complemental strand, 23478126 - 23477924
Alignment:
Q  505 aagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtc 604  Q
    |||||||||||  ||||||   | ||||| ||| ||||| ||||||||||||||||| ||| |||||||||| ||| ||||| |||||| ||||||||||    
T  23478126 aagaaagtaaatggcacagtgagtttgttgacctagttcagtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 23478027  T
Q  605 cttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccat 703  Q
    |||||| || || |||| ||||||  |  ||||| || |  |||||||| ||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  23478026 cttattctatagctctcagcaaacaacttgtttacaa-taaagacctagaacctacccgtattgatttcaacctaggaactcctagatctgagatcccat 23477928  T
Q  704 ctca 707  Q
    ||||    
T  23477927 ctca 23477924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 539 - 710
Target Start/End: Complemental strand, 20841422 - 20841251
Alignment:
Q  539 agttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagttta 637  Q
    |||||||||||||||||||||||  |  |||||||||| ||| ||||| |||||| |||||||||||||||| || || |||  |||||||||  |||||    
T  20841422 agttcggtgacaaacacacctactatatgggctaccaagccaggaaggaaatccactagtgtagtccttattttatagctcttagcaaactcctcgttta 20841323  T
Q  638 gaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     | ||  ||||||||||||||| ||||  || |||||||||||||||||||||||| ||||||||||||||||    
T  20841322 ca-ctaaagacctaggacctacatgtacagacttcaacctaggaactcctagatctgagatcccatctcacta 20841251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 11668030 - 11667849
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||| ||| |||||||||||| ||| |||||||||| ||| ||||| |||| | |||||||||||||||| || || |||| ||||||    
T  11668030 ttgttgacccagttcgatgagaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattctatagctctcagcaaac 11667931  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  |||||  ||||||||| |||| || |||||||||||||||||||||||| |||| |||||||||||    
T  11667930 tcctcgttta-cactaaagaccatggacctacccgtatagacttcaacctaggaactcctagatctgagattccatctcacta 11667849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 497 - 706
Target Start/End: Original strand, 17038207 - 17038414
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| ||||||||||||  ||||||| | ||||||||||||||||||| |||   ||||||| ||| |||||||||| || || ||| |||||| ||    
T  17038207 taaaagacaagaaagtaaaaaacacaggaagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagcc-aggaggaaatccacta 17038304  T
Q  597 gtgtagtccttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||| |  || |||| |||||||||  |||||  |||  |||| |||||||||||  | |||| |||||||||||||||||||||||| |    
T  17038305 gtgtagtccttattctctagctctcagcaaactcctcgttta-cactaaagacataggacctacccatcttgacttcaacctaggaactcctagatctga 17038403  T
Q  696 gatcccatctc 706  Q
    |||||||||||    
T  17038404 gatcccatctc 17038414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 497 - 727
Target Start/End: Complemental strand, 10340356 - 10340127
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| | |||||||||| |||||| | | ||||| |||||||||||| ||||  |||||||| ||| ||||||| ||  || ||||| |||||| ||    
T  10340356 taaaagacaggaaagtaaaaggcacagaaagtttgttgacccagttcggtaacaagtacacctactctgggggctactaagtcaggaaggaaatccacta 10340257  T
Q  597 gtgtagtccttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
     ||||||| ||||| | ||||| || | ||||  || ||||| ||||   ||||||||||||||| || |  | |||||||||||||||||||||||| |    
T  10340256 ttgtagtctttattcttaagttttcagtaaac--catgtttacaacttacgacctaggacctacccgtctatatttcaacctaggaactcctagatctga 10340159  T
Q  696 gatcccatctcactaccactcaatcaatcaca 727  Q
    |||| |||||||||| |   ||||||||||||    
T  10340158 gatctcatctcactatcctacaatcaatcaca 10340127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 555 - 707
Target Start/End: Original strand, 17012019 - 17012172
Alignment:
Q  555 cacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta-gacctag 652  Q
    ||||||| ||| |||||||||| ||| ||||| |||||| ||||||||||||||||  | || | || |||||||||  |||| | ||| || |||||||    
T  17012019 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaacagctttcagcaaactcctcgttt-gcactatatgacctag 17012117  T
Q  653 gacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    |||||||||||| ||| |||||||||||||||||| ||||| ||||| |||||||    
T  17012118 gacctacctgtactgacttcaacctaggaactcctggatctgagatctcatctca 17012172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 710
Target Start/End: Original strand, 13165503 - 13165567
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| |||| || |||||| ||||||||||||||||||||||||||||||||||    
T  13165503 gacctaggacctacccgtatagacttcaacataggaactcctagatctaagatcccatctcacta 13165567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 707
Target Start/End: Original strand, 33062377 - 33062555
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||||||| |||  |||| |||||| ||||||||||||||||  | || |||  ||||||    
T  33062377 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccagaaaggaaatccactagtgtagtccttattcaatagctcttagcaaac 33062475  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    |||  |||| | ||| || |||||||||||||||  || ||| |||||||||||||||||||||||| ||| |||||||||    
T  33062476 tcctcgttt-gcactatatgacctaggacctacccttactgacttcaacctaggaactcctagatctgagaccccatctca 33062555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 14745950 - 14745769
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||| ||||||||||||||||| || ||| |||||||||| ||| ||||  |||||| |||||||||||||||| |  || |||| ||||||    
T  14745950 ttgttgacccagctcggtgacaaacacaccaactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaac 14745851  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    | |  |||||  ||| || ||| || |||||||| |||| || |||||||||||||||| ||||||| ||||| ||||||||||    
T  14745850 tactcgttta-cactatatgacata-gacctacccgtatagacttcaacctaggaactcttagatctgagatcacatctcacta 14745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 709
Target Start/End: Complemental strand, 45599380 - 45599317
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||    
T  45599380 gacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 45599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 710
Target Start/End: Complemental strand, 47941538 - 47941326
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaat 595  Q
    ||||||| |||||||||||| |||||| | | ||||||||||| |||||  |||| | |||||||| ||| | ||||| ||  |||||||| |||||| |    
T  47941538 taaaagacaagaaagtaaaaggcacagtaagtttgttaacccaattcggc-acaa-ctcacctacatctgggagctacaaagtcaagaaggaaatccact 47941441  T
Q  596 agtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatcta 694  Q
    ||||||||||||||| || || |||  |||||||||  ||||| | ||  |||| ||||||||||| || | || |||||||||| |||||||| ||||     
T  47941440 agtgtagtccttattctatagctcttagcaaactcctcgtttaca-ctaaagacataggacctacccgtctagatttcaacctagtaactcctaaatctg 47941342  T
Q  695 agatcccatctcacta 710  Q
    ||||| ||||||||||    
T  47941341 agatctcatctcacta 47941326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 598
Target Start/End: Complemental strand, 20859710 - 20859641
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagt 598  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| |||||| ||||    
T  20859710 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagt 20859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 508 - 709
Target Start/End: Complemental strand, 40313411 - 40313211
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    ||||||||||||||||   | ||||||||||||||| ||| |||    |||||| | | |||||||||| ||| ||||| |||||| ||||||||||| |    
T  40313411 aaagtaaaatgcacagtgagtttgttaacccagttcagtg-caacgttacctactcagggggctaccaagccaggaaggaaatccactagtgtagtccgt 40313313  T
Q  608 attata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctc 706  Q
    |||  | || |||| |||||||||  |||| | |||   ||||||||||||| | ||| ||| |||||||||||||||| || |||| ||||| ||||||    
T  40313312 attcaatagctctcagcaaactcctcgttt-gcactaatgacctaggacctagccgtactgacttcaacctaggaactcatatatctgagatctcatctc 40313214  T
Q  707 act 709  Q
    |||    
T  40313213 act 40313211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 564
Target Start/End: Complemental strand, 18379898 - 18379863
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacact 564  Q
    ||||||||||||||||||||||||||||||||||||    
T  18379898 ttgttaacccagttcggtgacaaacacacctacact 18379863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 709
Target Start/End: Complemental strand, 52436866 - 52436807
Alignment:
Q  650 taggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||| ||||| ||| ||| |||||||||||||||||||||||| ||||| |||| ||||    
T  52436866 taggatctacccgtactgacttcaacctaggaactcctagatctgagatctcatcccact 52436807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 459
Target Start/End: Complemental strand, 17356135 - 17356065
Alignment:
Q  390 ttagctttcagatgttctatgtgatgttccaacaccaaacaca-aaatacaaatgttgaatgtaatgttta 459  Q
    |||| ||| ||||||| |||| ||||||||||||||| ||||| ||| ||||||||||| | |||||||||    
T  17356135 ttagttttaagatgttttatgcgatgttccaacaccagacacacaaaaacaaatgttgagtttaatgttta 17356065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 41330969 - 41330891
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    ||||| |||||||||||||||||||||||||||  || ||||||| || ||| ||||  || ||| ||||||| |||||    
T  41330969 ttgttgacccagttcggtgacaaacacacctactttgggggctactaagccaggaagtaaaaccactagtgtaatcctt 41330891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 9e-66; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 496 - 727
Target Start/End: Original strand, 10251398 - 10251629
Alignment:
Q  496 gtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaat 595  Q
    |||||||| || | ||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||  ||||||||| ||| ||||| ||||   |    
T  10251398 gtaaaagacaatagagtaaaatgcacaggagaattgttaacccagttcggtgataaacacacctactctggaggctaccaagccaggaaggaaatcttct 10251497  T
Q  596 agtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    ||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||| ||||||| |||||| || |||||| ||||||| |    
T  10251498 agtgtagtccttattctaagttctcagcaaactccaagcttacaactctagacctaggacctacccgtattgacttcaacataagaactcttagatctga 10251597  T
Q  696 gatcccatctcactaccactcaatcaatcaca 727  Q
    ||||||||||||||  ||||||||||||||||    
T  10251598 gatcccatctcactttcactcaatcaatcaca 10251629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 537 - 730
Target Start/End: Complemental strand, 9894226 - 9894033
Alignment:
Q  537 ccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagttt 636  Q
    |||||| |||||||||||||||||| ||| || |||||||  ||  |||| |||||| |||||||||||||||| ||||||||| ||||| |||||||||    
T  9894226 ccagtttggtgacaaacacacctactctggggactaccaagtcagtaaggaaatccactagtgtagtccttattctaagttctcagcaaattccaagttt 9894127  T
Q  637 agaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
    | ||||  ||||||||||| |||| ||||||| |||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  9894126 acaacttaagacctaggacatacccgtattgacttcaacctaggaactcctagatctgagatcccatctcactttcactcaatcaatcacaacc 9894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 496 - 709
Target Start/End: Complemental strand, 23580155 - 23579941
Alignment:
Q  496 gtaaaagataagaaag-taaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaa 594  Q
    |||||||| ||||||  ||||| ||| ||||| |||||||||||||||||||||| |||||||||||  || ||| |||||| ||||||||| |||| |     
T  23580155 gtaaaagacaagaaaaataaaaggcataggagaattgttaacccagttcggtgactaacacacctactatgggggttaccaagccaagaaggaaatctac 23580056  T
Q  595 tagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatcta 694  Q
    |||||||||||||||| |||||| || |||||||||  ||||| |||| || |||||||||||||| || |||||||||||||| ||||||||||||||     
T  23580055 tagtgtagtccttattttaagttttcagcaaactcctcgtttacaactataaacctaggacctacccgtcttgaattcaacctaagaactcctagatctg 23579956  T
Q  695 agatcccatctcact 709  Q
     |||| |||||||||    
T  23579955 ggatctcatctcact 23579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 389 - 721
Target Start/End: Original strand, 19352981 - 19353313
Alignment:
Q  389 gttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaa 488  Q
    ||||||||||||||||| || |  ||||||||||||||||||||||| || || ||||| | ||||||||| ||| | |||||||||  || ||| | ||    
T  19352981 gttagctttcagatgttttaagcaatgttccaacaccaaacacaaaagacgaaagttgagtttaatgttta-aacattgtgctaacaataacaaacataa 19353079  T
Q  489 t---gcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaag 585  Q
    |   | ||| ||||| || |||||||||||  ||||||| | ||||||||||||||||| |||||| ||||||||| ||| ||||||| || ||||||||    
T  19353080 ttaggtaaaagtaaa-gacaagaaagtaaatggcacaggtgaattgttaacccagttcgatgacaa-cacacctactctgagggctactaagccaagaag 19353177  T
Q  586 gtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactc 685  Q
    | |||||| ||||||| | |||  | ||||||||| |||||||||||||| | ||||    ||| | |||||||| ||||| | ||||||| ||||||||    
T  19353178 gaaatccactagtgtatttcttgctctaagttctcagcaaactccaagttcacaacttataaccaaagacctacccgtattcacttcaaccgaggaactc 19353277  T
Q  686 ctagatctaagatcccatctcactaccactcaatca 721  Q
    |||||||| |||| |||||||||| |||||||||||    
T  19353278 ctagatctgagattccatctcacttccactcaatca 19353313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 496 - 730
Target Start/End: Original strand, 23296458 - 23296694
Alignment:
Q  496 gtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaa---gaaggtaatcc 592  Q
    |||||||| |||||| |||||||||||  || |||||||| |||||||||||||||||||||||||  ||  ||||||||| | ||   ||||| |||||    
T  23296458 gtaaaagacaagaaaataaaatgcacaatagaattgttaatccagttcggtgacaaacacacctactttggaggctaccaagctaataggaaggaaatcc 23296557  T
Q  593 aatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatc 692  Q
    | |||||||||||||||| || ||  |   ||||||||  | ||| |||||||||||||||||||||| || |||| |||||||||||||||||||||||    
T  23296558 attagtgtagtccttattctatgtcttgaccaaactccttgcttacaactctagacctaggacctacccgtcttgacttcaacctaggaactcctagatc 23296657  T
Q  693 taagatcccatctcactaccactcaatcaatcacaacc 730  Q
    | ||||||||||||||| ||| |||||||| |||||||    
T  23296658 tgagatcccatctcacttcca-tcaatcaaccacaacc 23296694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 567 - 730
Target Start/End: Original strand, 24813954 - 24814116
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtatt 666  Q
    |||||||||| ||| ||||| |||||| |||||||||||||||| |||| |||| ||||||| | |||||| |||||||||||||||||||||| ||||     
T  24813954 gggctaccaagccaggaaggaaatccactagtgtagtccttattgtaagctctcagcaaactactagtttaaaactctagacctaggacctacccgtatc 24814053  T
Q  667 gaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcacaacc 730  Q
     | |||||||||||||||||||||||| |||||| |||||||| || |||||||||||||||||    
T  24814054 aacttcaacctaggaactcctagatctgagatcctatctcacttcc-ctcaatcaatcacaacc 24814116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 412 - 727
Target Start/End: Complemental strand, 10039023 - 10038697
Alignment:
Q  412 gatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataa----aatgcaaacgtaaaagataag 507  Q
    |||||||||||| || ||||||||||| |||||||||||||||||||||||| |||||||| ||||||  ||  |    || | |||  |||| || |      
T  10039023 gatgttccaacatcagacacaaaatacgaatgttgaatgtaatgtttagaacatcgtgctagcagaaaacaaacacaacaaggaaaatataaacgacaga 10038924  T
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcg------ggctaccaaaccaagaaggtaatccaatagtgta 601  Q
    |||||| || ||||| ||| |||||||||||||||||||||||||||||||||| ||| |      |||||| || | || |||| |||||| |||||||    
T  10038923 aaagtagaaggcacaagagaattgttaacccagttcggtgacaaacacacctactctgggtttgggggctactaagcaaataaggaaatccactagtgta 10038824  T
Q  602 gtccttattataa-gttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcc 700  Q
    ||||||||| ||| |||||||||||||||   ||||| ||||  ||||||||||||| |  || | || ||||||||| |||||||||||||| ||||||    
T  10038823 gtccttattctaaagttctcggcaaactcttcgtttacaacttaagacctaggacctgctcgtctagacttcaacctaagaactcctagatctgagatcc 10038724  T
Q  701 catctcactaccactcaatcaatcaca 727  Q
    |||||||||| |   ||||||||||||    
T  10038723 catctcactatcctacaatcaatcaca 10038697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 508 - 727
Target Start/End: Complemental strand, 26195645 - 26195428
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtcct 606  Q
    ||||||||| ||||||  || |||||||||||||||||||   ||| |||||||| |||  ||||||||| ||||||||  ||| || || |||| ||||    
T  26195645 aaagtaaaacgcacagttggtttgttaacccagttcggtgc--aactcacctacatctggaggctaccaagccaagaagaaaattcactactgtattcct 26195548  T
Q  607 tattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctc 706  Q
    |||| ||||||||| ||||| |||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||    
T  26195547 tattctaagttctcagcaaattcctcgtttacaactctagacctaggacctacctgtattaaattcaacctaggaactcctaaatctgagattccatctc 26195448  T
Q  707 actaccactcaatcaatcaca 727  Q
    ||| || |||||| |||||||    
T  26195447 acttcc-ctcaattaatcaca 26195428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 26133082 - 26132902
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaac 627  Q
    |||||||||||||||||||||||| |||||||| ||| |||||| ||| ||| ||||| |||||| |||||||||||||||| ||| |||||| |||||     
T  26133082 ttgttaacccagttcggtgacaaagacacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattctaatgttctcagcaaa- 26132984  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     |||  |||| ||| | ||||||| |||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  26132983 -ccacatttacaacacaagacctaagacctacccgtattgatttcaacctaggaactcctagatctgagatctcatctcacta 26132902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 7586697 - 7586516
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataag-ttctcggcaaac 627  Q
    ||||| |||||||||||||||||||| |||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| |||  ||||| |||||     
T  7586697 ttgttgacccagttcggtgacaaacatacctactctg-gggctaccaagccaggaaggaaatccactagtgtagtccttattctaaacttctcagcaaaa 7586599  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| ||||  |||||||||||||||| || | || |||||||||| ||||||||||||||||||||||||||||||    
T  7586598 tcctcgtttacaacttaagacctaggacctacccgtctagacttcaacctagaaactcctagatctaagatcccatctcacta 7586516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 42636206 - 42636419
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| |||||  | | ||||||||| |||||||||||||||| |||||| |||  ||||||||| | | ||||| |||||| ||    
T  42636206 taaaagacaagaaagtaaaaggcacatcaagtttgttaaccaagttcggtgacaaacatacctactctggaggctaccaagcaaggaaggaaatccacta 42636305  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||| || || |||| |||||||||  |||||  |||  ||||||||||||||||  |||||| |||||||||||||||||||||||| |    
T  42636306 gtgtagtccttattctatagctctcagcaaactccttgttta-cactaaagacctaggacctacccatattgatttcaacctaggaactcctagatctga 42636404  T
Q  696 gatcccatctcacta 710  Q
    |||| ||||||||||    
T  42636405 gatctcatctcacta 42636419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 528 - 709
Target Start/End: Original strand, 7508425 - 7508605
Alignment:
Q  528 attgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaac 627  Q
    ||||||||||||||||| ||||||||||||||||  |  |||||||||| ||| ||||| |||||| |||||||||| ||||| |||||||||   ||||    
T  7508425 attgttaacccagttcgatgacaaacacacctacttttggggctaccaagccaggaaggaaatccactagtgtagtctttattctaagttctcaaaaaac 7508524  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  ||||| |||||||||||||| ||||| | |  |||| |||||||||||||||||||||||| |||||||||||||||    
T  7508525 tcctcgtttacaactctagacctagaacctatc-ggcttgacttcaacctaggaactcctagatctgagatcccatctcact 7508605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 508 - 727
Target Start/End: Original strand, 15708142 - 15708359
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtcct 606  Q
    ||||||||| ||||||  || |||||||||||||| ||||   ||| ||||| || ||| || ||||||| | | ||||| |||||| ||||||||||||    
T  15708142 aaagtaaaaggcacagttggtttgttaacccagtttggtgc--aactcacctgcatctggggtctaccaagctaggaaggaaatccactagtgtagtcct 15708239  T
Q  607 tattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctc 706  Q
    |||| |||||| || | |||||||  ||||| ||||||||||||| |||||||| ||||||| || ||||||||||||||||||||| ||||||||||||    
T  15708240 tattttaagttttcagaaaactcctcgtttacaactctagacctacgacctacccgtattgacttgaacctaggaactcctagatctgagatcccatctc 15708339  T
Q  707 actaccactcaatcaatcaca 727  Q
    ||| || ||||||||||||||    
T  15708340 acttcc-ctcaatcaatcaca 15708359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 496 - 730
Target Start/End: Original strand, 24902066 - 24902297
Alignment:
Q  496 gtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaat 595  Q
    ||||| || |||||||||||| ||||||   | ||||| ||||||||| ||||||||||||||||   |  |||||||||| ||| ||||| |||||| |    
T  24902066 gtaaatgacaagaaagtaaaaggcacaga--gtttgttgacccagttcagtgacaaacacacctattataggggctaccaagccaggaaggaaatccact 24902163  T
Q  596 agtgtagtccttattataa-gttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatcta 694  Q
    ||||||||||||||||||| |||||| | ||||  || ||||| ||||  |||||||||||||||| || | || ||||||||||||||||||||||||     
T  24902164 agtgtagtccttattataaagttctcagtaaac--cacgtttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctg 24902261  T
Q  695 agatcccatctcactaccactcaatcaatcacaacc 730  Q
    |||||||||||||||| |   |||||||||||||||    
T  24902262 agatcccatctcactatcctacaatcaatcacaacc 24902297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 509 - 721
Target Start/End: Original strand, 14687339 - 14687550
Alignment:
Q  509 aagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctta 608  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||||||||  ||  ||||||||| | | ||||| ||| || |||||||||| ||     
T  14687339 aagtaaaatgcataggagg-ttgttaacctagttcggtgacaaacacacctactatggaggctaccaagctaggaaggaaattcactagtgtagtctttg 14687437  T
Q  609 ttataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcac 708  Q
    || ||||||||| ||||| ||||| || | ||||    ||||||||||||||  || ||| |||||||||||||||||||||||| |||| |||||||||    
T  14687438 ttctaagttctcagcaaattccaaattcacaacttataacctaggacctacccatactgacttcaacctaggaactcctagatctgagattccatctcac 14687537  T
Q  709 taccactcaatca 721  Q
    | |||||||||||    
T  14687538 ttccactcaatca 14687550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 4458730 - 4458912
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| |||||||||| ||| ||||| |||| | |||||||||||||||| | ||| |||| ||||||    
T  4458730 ttgttgaccgagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattcaaaagctctcagcaaac 4458829  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  4458830 tcctcgtttaca-ctttatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 4458912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 506 - 721
Target Start/End: Complemental strand, 20597015 - 20596800
Alignment:
Q  506 agaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcc 605  Q
    ||||||||||| ||||| | |  ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||| |||| | ||||||||| |    
T  20597015 agaaagtaaaaggcacaagtgatttgttaaccgagttcggtgacaaacacacctactctgggggctaccaagccaagaaggaaatcgactagtgtagtac 20596916  T
Q  606 ttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatct 705  Q
    || || ||||||||| | |||||||||||||| ||||      |||||||| |  |||| | | |||||||||||||||||||||||| ||||||||| |    
T  20596915 ttgttctaagttctcagaaaactccaagtttacaacttatcttctaggacccaagtgtactaacttcaacctaggaactcctagatctgagatcccatat 20596816  T
Q  706 cactaccactcaatca 721  Q
    |||| ||||| |||||    
T  20596815 cacttccacttaatca 20596800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 401 - 709
Target Start/End: Original strand, 9564117 - 9564426
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaa---taaataaaat-gcaaacg 496  Q
    |||||||||| |||||||||||||||| |||| |  ||| ||||||||||  ||||||||||| |||||||| ||| ||   |||| ||||  |||||      
T  9564117 atgttctatgcgatgttccaacaccaagcacagataacagatgttgaatgagatgtttagaacatcgtgctagcagtaaacataaacaaaacagcaaaa- 9564215  T
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| ||||||   | ||||||||||||||||||| |||   ||||||| ||| ||||||| || ||| || || |||||||||    
T  9564216 taaaagacaagaaagtaaaaggcacagagagtttgttaacccagttcggtg-caacgtcacctactctgggggctacaaagccagga-ggaaatccaata 9564313  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||| |  || |||| |||||||||  ||||| | |   |||||||||||||||| |  |||| |||||||||||||||||||||||| |    
T  9564314 gtgtagtccttattctctagctctcagcaaactcctcgtttaca-caaaagacctaggacctacccgccttgacttcaacctaggaactcctagatctga 9564412  T
Q  696 gatcccatctcact 709  Q
    ||||||||||||||    
T  9564413 gatcccatctcact 9564426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 16208049 - 16207867
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||| ||||| ||||||||||||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| | ||| |||| ||||||    
T  16208049 ttgttgacccatttcggcgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaac 16207950  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  16207949 tcctcgttta-cactttatgacctagcacctacccgtattgatttcaacctaggaactcatagatctgagatcccatctcacta 16207867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 20991533 - 20991714
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| || || |||| ||||||    
T  20991533 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattttatagctctcagcaaac 20991632  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  |||||||||||||| |   || || |||||||||||||||||||||||| |||||| |||||||||    
T  20991633 tcctcgttta-cactaaagacctaggacctatccagatagacttcaacctaggaactcctagatctgagatcctatctcacta 20991714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 391 - 709
Target Start/End: Complemental strand, 23083082 - 23082762
Alignment:
Q  391 tagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacag-aaataaa---taa 486  Q
    ||||||||||||||| |||  |||||| ||||| ||||||||||||||| ||| ||| ||| || ||| |||| |||||||| ||| ||| |||   |||    
T  23083082 tagctttcagatgttttatacgatgttgcaacatcaaacacaaaatacagatgctgagtgtgattttttgaacatcgtgctagcagtaaacaaaaattaa 23082983  T
Q  487 -aatgcaaacgtaaaagataagaaa-gtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaa 584  Q
     || |||||    ||||| |||||| |||||||||||| ||  ||||||||||||||| ||||| |||||||||||| || |||||||||||  || |||    
T  23082982 caaggcaaat---aaagaaaagaaaagtaaaatgcacaagacaattgttaacccagtttggtgagaaacacacctactctacgggctaccaagtcaggaa 23082886  T
Q  585 ggtaatccaatagtgtagtccttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaac 683  Q
    || |||||| |||||||||||||||| | |||||||| |||||  ||| ||||| ||||  |||| ||||| ||| | || | || ||||||||||||||    
T  23082885 ggaaatccactagtgtagtccttattctaaagttctcagcaaa--ccacgtttacaacttaagacgtaggatctagccgtctagacttcaacctaggaac 23082788  T
Q  684 tcctagatctaagatcccatctcact 709  Q
    || ||||||| ||||||||| |||||    
T  23082787 tcatagatctgagatcccatgtcact 23082762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 529 - 722
Target Start/End: Original strand, 23057197 - 23057390
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaact 628  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| ||| || ||||||||||||  || ||||||||| |||||||    
T  23057197 ttgttaacccagttcggtgacaaacacacctactctgagggctaccaagccaggaaggaaattcactagtgtagtcctagttctaagttctctgcaaact 23057296  T
Q  629 ccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaa 722  Q
    ||||||||| ||||    |||| |   ||| | ||| ||| |||| || |||||||||||||| | ||||| ||||||||| ||||||||||||    
T  23057297 ccaagtttacaacttatcacctggatactatccgtactgacttcagccgaggaactcctagatttgagatctcatctcacttccactcaatcaa 23057390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 519 - 707
Target Start/End: Complemental strand, 23175058 - 23174870
Alignment:
Q  519 cacaggaggattgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagtt 617  Q
    ||||| ||| ||||||||||||||||||| |||   |||||||| ||  |||||||||| ||| ||||| |||||| |||||||||||||||| ||||||    
T  23175058 cacagaaggtttgttaacccagttcggtg-caacatcacctacatctaggggctaccaagccaggaaggaaatccactagtgtagtccttattctaagtt 23174960  T
Q  618 ctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
     || |||||   |  ||||| ||||||||||||||||| |||| ||||||| |||||| ||||||||||||||||| |||||||||||||    
T  23174959 atcagcaaatctctcgtttacaactctagacctaggacttacccgtattgacttcaacataggaactcctagatctgagatcccatctca 23174870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 415 - 727
Target Start/End: Original strand, 6045194 - 6045506
Alignment:
Q  415 gttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacag-aaataaataaaat---gcaaacgtaaaagataagaaa 510  Q
    |||||||||||| | ||| | ||| |||||||| ||||||||||| ||| |||||||| ||| ||| ||| | |||   | ||| ||||| || | ||||    
T  6045194 gttccaacaccagaaacatattacgaatgttgagtgtaatgtttaaaacatcgtgctagcagtaaagaaacacaataaggaaaatgtaaaggaca-gaaa 6045292  T
Q  511 gtaaaatg-cacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttat 609  Q
     ||||||| |||| ||| |||||| ||| |||||||||| |||||| ||||| ||| |||||||||| ||| ||||  |||||| |||||||||||||||    
T  6045293 ataaaatggcacaagagaattgtttacctagttcggtgaaaaacacgcctactctg-gggctaccaagccaggaagaaaatccactagtgtagtccttat 6045391  T
Q  610 tataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    | ||||||||| | |||  ||| ||||| ||||||||||||||||  |||  || || | |||||||||| ||||| ||||||||||||| |||||||||    
T  6045392 tctaagttctccgtaaa--ccacgtttataactctagacctaggatatactcgtctttacttcaacctagaaactcgtagatctaagatctcatctcact 6045489  T
Q  710 accactcaatcaatcaca 727  Q
      | ||||||||||||||    
T  6045490 ttc-ctcaatcaatcaca 6045506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 497 - 664
Target Start/End: Original strand, 10658342 - 10658509
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| |||||| | | ||||||||||||||| ||||||||||||||||| |||  ||||||||| ||| ||||| |||||| ||    
T  10658342 taaaagagaagaaagtaaaaggcacagcaagtttgttaacccagttccgtgacaaacacacctactctggaggctaccaagccaggaaggaaatccacta 10658441  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgta 664  Q
    |||||||||||||| || || |||| |||||||||  |||||  |||  ||||||||||||||||||||    
T  10658442 gtgtagtccttattctatagctctcagcaaactcctcgttta-cactaaagacctaggacctacctgta 10658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 497 - 730
Target Start/End: Original strand, 23956836 - 23957069
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| ||||||   | ||||| ||| |||||||||||||||||| ||||  |   ||||||||| ||| ||||  |||||| ||    
T  23956836 taaaagacaagaaagtaaaaggcacagagagtttgttgacctagttcggtgacaaacacatctactttagaggctaccaagccaggaagaaaatccacta 23956935  T
Q  597 gtgtagtccttattataa-gttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatcta 694  Q
    |||||||||||||| ||| |||||| ||||||  || ||||| |||| || ||||||||||||||| || | || ||||||||||||||||||||||||     
T  23956936 gtgtagtccttattctaaagttctcagcaaac--cacgtttacaactttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctg 23957033  T
Q  695 agatcccatctcactaccactcaatcaatcacaacc 730  Q
    ||||| |||||| ||| |   |||||||||||||||    
T  23957034 agatctcatctccctatcctacaatcaatcacaacc 23957069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 529 - 730
Target Start/End: Original strand, 14926638 - 14926839
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    |||||||||||||| ||||||| |||||||||| ||| |||||||||| ||||||||| |||| | |||||||||||||||| |  || |||| ||||||    
T  14926638 ttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagcaaac 14926737  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||  |||||  | |  |||||||||||||||| ||||||| |||||||||| |||| |||||| | ||||  |||||||||| |   ||||||||||||    
T  14926738 tcctcgttta-cagtaaagacctaggacctacccgtattgatttcaacctagaaacttctagatatgagatttcatctcactatcctacaatcaatcaca 14926836  T
Q  728 acc 730  Q
    |||    
T  14926837 acc 14926839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 529 - 730
Target Start/End: Original strand, 15350104 - 15350305
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    |||||||||||||| ||||||| |||||||||| ||| |||||||||| ||||||||| |||| | |||||||||||||||| |  || |||| ||||||    
T  15350104 ttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagcaaac 15350203  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||  |||||  | |  |||||||||||||||| ||||||| |||||||||| |||| |||||| | ||||  |||||||||| |   ||||||||||||    
T  15350204 tcctcgttta-cagtaaagacctaggacctacccgtattgatttcaacctagaaacttctagatatgagatttcatctcactatcctacaatcaatcaca 15350302  T
Q  728 acc 730  Q
    |||    
T  15350303 acc 15350305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 16436765 - 16436946
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||| |||||||||||||||||||||  || |||||||||| | | ||||| |||||| |||||||||||||||| |  || ||||  |||||    
T  16436765 ttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagctctcaacaaac 16436864  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| | ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  16436865 tcctcatttaca-ctaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgacatcccatctcacta 16436946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 506 - 721
Target Start/End: Complemental strand, 20588897 - 20588683
Alignment:
Q  506 agaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcc 605  Q
    ||||||||||||||||||  |  |||||||| ||||||||||||||||| || |||  || |||||||||| ||| ||||| |||| | ||||||||||     
T  20588897 agaaagtaaaatgcacagatgatttgttaactcagttcggtgacaaacaaac-tactttgggggctaccaagccaggaaggaaatcaactagtgtagtcg 20588799  T
Q  606 ttattataagttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatc 704  Q
    || || |||||||||  ||||||||||||||| || | ||  |||||||||||||  | | | | ||||||||| |||||||||||||| ||||| ||||    
T  20588798 ttgttctaagttctcaacaaactccaagtttacaa-tatatcacctaggacctactcgcactaacttcaacctaagaactcctagatctgagatctcatc 20588700  T
Q  705 tcactaccactcaatca 721  Q
    ||||| |||||||||||    
T  20588699 tcacttccactcaatca 20588683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 529 - 721
Target Start/End: Complemental strand, 31269222 - 31269032
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaact 628  Q
    ||||||||||||||||||||||||| ||||||| | | |||||||||| ||| ||||| |||||| |||||||||  |  || ||||||||| |||||||    
T  31269222 ttgttaacccagttcggtgacaaactcacctactccgggggctaccaagccatgaaggaaatccactagtgtagt-atagttctaagttctcagcaaact 31269124  T
Q  629 ccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatca 721  Q
    ||||||||| |||| ||   ||||   ||||   || ||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  31269123 ccaagtttacaact-tatcactagacactactcatactgatttcaacctaggaactcctagatctgagatctcatctcacttccactcaatca 31269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 11521578 - 11521396
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||||| |||||||||||||||||| ||  |||||||||| ||| ||||| |||| | |||||||||||||||| |  || |||| ||||||    
T  11521578 ttgttgacccagtttggtgacaaacacacctactctaggggctaccaagccaggaaggaaatctactagtgtagtccttattcaatagctctcagcaaac 11521479  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||||||||||||||| ||||  | | |||||||||||||||||||||||| ||||||||||||||    
T  11521478 tcctcgttta-cactatatgacctaggacctacccgtatatactccaacctaggaactcctagatctaaaatcccatctcacta 11521396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 645124 - 645306
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||| |||||||||||||||||  || ||||||| || ||| ||||| ||||||  |||||||||||||||  | || |||| ||||||    
T  645124 ttgttaacccagttcagtgacaaacacacctactatgggggctacgaagccaggaaggaaatccaccagtgtagtccttattcaatagctctcagcaaac 645223  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    | |  ||||| |   |  |||||||||||| || |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  645224 ttctcgtttacactacatgacctaggacctccccgtatagatttcaacctaggaactcctagatctgagatcccatctcacta 645306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 529 - 721
Target Start/End: Complemental strand, 11407117 - 11406925
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaact 628  Q
    |||||||||||||| | |||||||||||||||| ||| |||||||||  ||| ||||| | |||  || |||||||||  |||||||||||| ||| |||    
T  11407117 ttgttaacccagttagatgacaaacacacctactctgggggctaccatgccaggaaggaagtccgctaatgtagtcctagttataagttctcagcacact 11407018  T
Q  629 ccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatca 721  Q
    | ||||||| | ||    ||||||   ||||| ||||||| |||||||||||||||||||||||| |||| |||||||||   ||||||||||    
T  11407017 cgaagtttacagcttatcacctagacactacccgtattgacttcaacctaggaactcctagatctgagattccatctcacattcactcaatca 11406925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 527 - 708
Target Start/End: Original strand, 30226074 - 30226256
Alignment:
Q  527 gattgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggca 624  Q
    ||||||||||||||||||||| |||   |||||||| ||| ||||||||||  || ||||| |||||| ||||||||||||||||  | || |||| |||    
T  30226074 gattgttaacccagttcggtg-caacgtcacctacatctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagca 30226172  T
Q  625 aactccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcac 708  Q
    ||||||  |||| | ||| || ||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  30226173 aactcctcgttt-gcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcac 30226256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 11588455 - 11588637
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||| |||||||||||||||||||| ||   ||||||||| ||| ||||| |||||| ||||||||||||||||  | || ||||   ||||    
T  11588455 ttgttgacccagctcggtgacaaacacacctactctagcggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctctaaaaac 11588554  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| |    | ||||||||||||||| |||| || ||||||||||||||||||| |||| ||||||||||||||||    
T  11588555 tcctcgtttacactatttgacctaggacctacccgtatagacttcaacctaggaactcctatatctgagatcccatctcacta 11588637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 707
Target Start/End: Original strand, 10279806 - 10279983
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||| ||||||||||||||| ||| |||||||||| ||| ||||| ||| ||  ||||||||||||||| || || |||| ||||||    
T  10279806 ttgttgacctagttcggcgacaaacacacctactctg-gggctaccaagccaggaaggaaattcaccagtgtagtccttattctatagctctcagcaaac 10279904  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    |||  |||| | |||  | |||||||||||| | ||||||| |||||||||||||||| ||||||| ||||| |||||||    
T  10279905 tcctcgttt-gcactaaatacctaggacctatccgtattgatttcaacctaggaactcgtagatctgagatctcatctca 10279983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 536 - 707
Target Start/End: Complemental strand, 10309650 - 10309480
Alignment:
Q  536 cccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtt 635  Q
    |||||||| ||||||||| ||||||| ||| |||||||||| ||||||||| | |||| ||||||||| ||| || |||| |||| ||||||||||||||    
T  10309650 cccagttcagtgacaaacgcacctactctgggggctaccaagccaagaaggaagtccactagtgtagttcttgttctaagctctcagcaaactccaagtt 10309551  T
Q  636 tagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    || ||||    ||||||   ||||| ||||||| || |||||| |||||||||||| | ||||| |||||||    
T  10309550 tacaacttatcacctagacactacccgtattgactt-aacctaagaactcctagatttgagatctcatctca 10309480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 13455279 - 13455098
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||||| ||||||||| |||   ||||||| ||| |||||||||| | | ||||| |||||| |||||||||||||||| | ||| ||| |||||||    
T  13455279 ttgttaacctagttcggtg-caacgtcacctactctgggggctaccaagcaaggaaggaaatccactagtgtagtccttattcaaaagctcttggcaaac 13455181  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||| ||||||||||| || | || |||||||||||||||||||||||| ||||||||||||||||    
T  13455180 tcctcgtttaca-ctttatgacttaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcacta 13455098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 42782747 - 42782927
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||||||| ||| ||||  |||||| ||||||||||||||||  | || |||| ||||||    
T  42782747 ttgttaacccagttcggtg-caatgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaac 42782845  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  ||||  || | || ||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||    
T  42782846 tcctcgtttgcaa-tatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 42782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 401 - 709
Target Start/End: Complemental strand, 4794886 - 4794574
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacag---aaataaataaaatgcaaacgt 497  Q
    |||||||||| ||||||||||||||| |||||||  ||| ||||||||||  ||||||||||| ||||||||  ||   | ||||  ||||    ||  |    
T  4794886 atgttctatgcgatgttccaacaccagacacaaataacagatgttgaatgagatgtttagaacatcgtgctagtagtaaacataatcaaaacaacaaaat 4794787  T
Q  498 aaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatag 597  Q
    |||||| |||||| ||||| ||||||   | || |||||||||||| ||| |||   ||||||| ||| |||||||||| || || ||| |||||| |||    
T  4794786 aaaagacaagaaattaaaaagcacagagagttttttaacccagttcagtg-caacgtcacctactctgggggctaccaagcc-aggaggaaatccactag 4794689  T
Q  598 tgtagtccttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacct---aggaactcctagatct 693  Q
    ||||||||||||| |  || |||||| |||||||  |||||  |||  |||||||||||||||| || |||| ||||||||   ||||||||||||||||    
T  4794688 tgtagtccttattctctagctctcggaaaactcctcgttta-cactaaagacctaggacctacccgtcttgacttcaacctaggaggaactcctagatct 4794590  T
Q  694 aagatcccatctcact 709  Q
     ||||| |||||||||    
T  4794589 gagatcgcatctcact 4794574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 529 - 699
Target Start/End: Complemental strand, 48797785 - 48797616
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||| ||| |||   ||||||| ||| |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  48797785 ttgttaacccagttcagtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 48797687  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatc 699  Q
    |||  |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||    
T  48797686 tcctcgttt-gcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatc 48797616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 401 - 709
Target Start/End: Original strand, 9566766 - 9567075
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataa---ataaaatgcaaacgt 497  Q
    |||||||||| ||||||||||||||||  ||| |  |||||||||||||   ||||||| ||| |||||||| ||| ||| |   | ||||   |||  |    
T  9566766 atgttctatgcgatgttccaacaccaagaacagataacaaatgttgaatcagatgtttaaaacatcgtgctagcagtaatcatatacaaaacagaaaaat 9566865  T
Q  498 aaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatag 597  Q
    |||||| |||||||||||| ||||||   | ||||||||||||||||||| |||    |||||| | | |||||||||| ||| || || ||||||  ||    
T  9566866 aaaagacaagaaagtaaaaagcacagagagtttgttaacccagttcggtg-caacgttacctactcagggggctaccaagccagga-ggaaatccacaag 9566963  T
Q  598 tgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaag 696  Q
    ||||||||||||| |  || |||| |||||||||   |||| | ||  ||||||||||||||||  | |||| |||||||||||||||| ||||||| ||    
T  9566964 tgtagtccttattctctagctctcagcaaactcctcatttaca-ctaaagacctaggacctacccatcttgagttcaacctaggaactcatagatctgag 9567062  T
Q  697 atcccatctcact 709  Q
    |||||||||||||    
T  9567063 atcccatctcact 9567075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 707
Target Start/End: Original strand, 11998870 - 11999049
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    ||||| |||||||||| ||||||||||||||||  | | ||||| |||| ||| ||||| |||||| ||||||||||||||||  | || ||||  ||||    
T  11998870 ttgttgacccagttcgatgacaaacacacctacgtccgggggct-ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaa 11998968  T
Q  627 ctccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    ||||   |||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| |||||||||||||    
T  11998969 ctcctcatttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctca 11999049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 710
Target Start/End: Original strand, 15506234 - 15506438
Alignment:
Q  505 aagaaagtaaaatg-cacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagt 603  Q
    |||||||||||| | ||||||| | ||||||||||| |||| || |||   ||||||| ||  |||||||||| |||  | || |||||| |||||||||    
T  15506234 aagaaagtaaaaaggcacaggaagtttgttaacccaattcgatg-caacgtcacctactctaggggctaccaagccagaatggaaatccactagtgtagt 15506332  T
Q  604 ccttatt-ataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatccca 702  Q
    ||||||| | ||| |||| |||||||||  ||||| |  |   ||||||||||||||| |||| || ||||||||||||||||||||||||  |||||||    
T  15506333 ccttattcaaaagctctcagcaaactcctcgtttacattttatgacctaggacctacccgtatagacttcaacctaggaactcctagatct--gatccca 15506430  T
Q  703 tctcacta 710  Q
    ||||||||    
T  15506431 tctcacta 15506438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 646 - 709
Target Start/End: Original strand, 14975540 - 14975603
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  14975540 gacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 14975603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 646 - 709
Target Start/End: Original strand, 15405016 - 15405079
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  15405016 gacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 15405079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 3290851 - 3290671
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    |||||||||||||| |||| |||   |||| || ||| |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  3290851 ttgttaacccagtttggtg-caacgtcaccaactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 3290753  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  ||||  | || || ||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||| ||| |||||    
T  3290752 tcctcgttttca-ctatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatttcact 3290671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 529 - 708
Target Start/End: Original strand, 14984663 - 14984841
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagt-tctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||| ||| ||| ||||| |||||| ||||||||||||||||  |  | ||||  |||||    
T  14984663 ttgttaacccagttcggtg-caacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaac 14984761  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcac 708  Q
    |||  |||| | |||   ||||||| ||||||| ||| ||| ||||||||||||| |||||||||| ||||||||||||||    
T  14984762 tccctgttt-gcactaatgacctagaacctacccgtactgacttcaacctaggaattcctagatctgagatcccatctcac 14984841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 529 - 708
Target Start/End: Original strand, 15414274 - 15414452
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagt-tctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||| ||| ||| ||||| |||||| ||||||||||||||||  |  | ||||  |||||    
T  15414274 ttgttaacccagttcggtg-caacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaac 15414372  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcac 708  Q
    |||  |||| | |||   ||||||| ||||||| ||| ||| ||||||||||||| |||||||||| ||||||||||||||    
T  15414373 tccctgttt-gcactaatgacctagaacctacccgtactgacttcaacctaggaattcctagatctgagatcccatctcac 15414452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 508 - 709
Target Start/End: Original strand, 7620051 - 7620251
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    ||||||||| ||||||   | ||||||||||||||||||| |||   |||||||  ||  |||||||||  || ||||| |||||| |||||||||||||    
T  7620051 aaagtaaaaggcacagtgagtttgttaacccagttcggtg-caacgtcacctactttggaggctaccaagtcaggaaggaaatccactagtgtagtcctt 7620149  T
Q  608 attata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctc 706  Q
    |||  | || |||| ||||| |||  |||| | |||   |||||||||| |||| ||| | | |||||||||||||||||||||||| ||||||||||||    
T  7620150 attcaatagctctcagcaaaatcctcgttt-gcactaatgacctaggacttacccgtactaacttcaacctaggaactcctagatctgagatcccatctc 7620248  T
Q  707 act 709  Q
    |||    
T  7620249 act 7620251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 570 - 710
Target Start/End: Original strand, 12325845 - 12325986
Alignment:
Q  570 ctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtattg 667  Q
    ||||||| ||| ||||| |||||| |||||||||| ||||| | ||| |||| |||||||||   |||| | || || ||||| |||||||||||||| |    
T  12325845 ctaccaagccaggaaggaaatccactagtgtagtcattattcaaaagctctcagcaaactcctcatttaca-ctttatgaccttggacctacctgtatag 12325943  T
Q  668 aattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    | ||||||||||||||||||| |||| |||||| |||||||||    
T  12325944 acttcaacctaggaactcctacatctgagatccaatctcacta 12325986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 710
Target Start/End: Complemental strand, 29546280 - 29546124
Alignment:
Q  554 acacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctag 652  Q
    |||||||| ||  |||||||||| ||| ||||| |||||| || ||||||||||||| || |  |||| ||||||| |  ||||| | ||  ||||||||    
T  29546280 acacctactctcggggctaccaagccaggaaggaaatccactactgtagtccttattctataactctcagcaaacttctcgtttaca-ctaaagacctag 29546182  T
Q  653 gacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||| |||| || || | ||||||||||||||||||| ||||| ||||||||||    
T  29546181 gacctacccgtatagactttagcctaggaactcctagatctgagatctcatctcacta 29546124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 662 - 710
Target Start/End: Original strand, 10660987 - 10661035
Alignment:
Q  662 gtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  10660987 gtattgatttcaacctaggaactcctagatctgagatcccatctcacta 10661035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 709
Target Start/End: Original strand, 11628748 - 11628811
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||||||||| ||| ||| |||| |||||||||||||||||| ||||||||| ||||||    
T  11628748 gacctaggacctacccgtactgacttcagcctaggaactcctagatcgaagatcccacctcact 11628811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 4548070 - 4547996
Alignment:
Q  375 tgaaactctggcatgttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaat 449  Q
    ||||| ||||||| |||||  || |||||||||||||||||||||||||||| ||||||| |||| | |||||||    
T  4548070 tgaaattctggcacgttagtcttaagatgttctatgtgatgttccaacaccacacacaaattacagacgttgaat 4547996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 649 - 710
Target Start/End: Original strand, 14165277 - 14165338
Alignment:
Q  649 ctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||| ||||||| |||| || |||||||||||||||||||||||| ||||| ||||||||||    
T  14165277 ctagaacctacccgtatagacttcaacctaggaactcctagatctgagatcacatctcacta 14165338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 610
Target Start/End: Original strand, 21260514 - 21260587
Alignment:
Q  537 ccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||||||||||||||||||||||| ||| ||||||||||   | ||||  |||||| ||||||||||||||||    
T  21260514 ccagttcggtgacaaacacacctactctgggggctaccaacttaggaagaaaatccattagtgtagtccttatt 21260587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 656 - 709
Target Start/End: Original strand, 24049568 - 24049621
Alignment:
Q  656 ctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  24049568 ctacccgtattgacttcaacctaggaactcctagatctgagatcacatctcact 24049621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 20925265 - 20925089
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||||| ||||||||||||  || | |||| |    |||||||| |||||| |||| | ||||||||| || || ||||  |||||    
T  20925265 ttgttgacccagttcggtgataaacacacctactatgagagctagc----caagaaggaaatccactagtttcgtccttattctatagctctcaacaaac 20925170  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  ||||| | ||  ||||||| ||||||||||| | || |||||| |||||||||||| || | |||||||||||||||    
T  20925169 tcctcgtttaca-ctaaagacctaagacctacctgtctagacttcaacttaggaactcctaaatttgagatcccatctcact 20925089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 655 - 707
Target Start/End: Complemental strand, 4547852 - 4547800
Alignment:
Q  655 cctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    |||||| ||||| | ||||||||| |||||||||||||| |||||||||||||    
T  4547852 cctacccgtatttacttcaacctaagaactcctagatctgagatcccatctca 4547800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 709
Target Start/End: Complemental strand, 11560557 - 11560493
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||||||  ||||||| ||||||| |||||||||||||||||| ||||| | ||| |||||||||    
T  11560557 agacctacaacctacccgtattgacttcaacctaggaactcctggatctgatatctcatctcact 11560493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 487 - 722
Target Start/End: Original strand, 5367 - 5602
Alignment:
Q  487 aatgcaaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaagg 586  Q
    |||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||| ||  |||||   ||  ||  ||||    
T  5367 aatgcaaacgtaaaagataagaaagtaaatggcacaagagaattgttaacccagttcggtgacaaacacacctactctaggggctgttaagtcagaaagg 5466  T
Q  587 taatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcc 686  Q
     |||||| ||||||||||||||||  |||||||  |||||||||||||||| ||||||||||||||||| ||||||| || | |||||||||||||||||    
T  5467 aaatccactagtgtagtccttattccaagttctgagcaaactccaagtttacaactctagacctaggacttacctgtcttaacttcaacctaggaactcc 5566  T
Q  687 tagatctaagatcccatctcactaccactcaatcaa 722  Q
    ||||||| ||||||||||||||| || |||||||||    
T  5567 tagatctgagatcccatctcacttcctctcaatcaa 5602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 1e-55; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 496 - 730
Target Start/End: Complemental strand, 12814793 - 12814560
Alignment:
Q  496 gtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaat 595  Q
    |||||||| |||||| ||||| ||||| ||| |||||||||||| || |||||||||||||||||| ||| |||||||||| ||| ||||| ||| || |    
T  12814793 gtaaaagacaagaaaataaaaggcacaagagaattgttaacccaatttggtgacaaacacacctactctgggggctaccaagccaggaaggaaattcact 12814694  T
Q  596 agtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    ||||||||||||||| ||||||||| |||||||||  ||||| |||| ||||||||||||||||| || ||||  ||||||||| ||||||||||| |||    
T  12814693 agtgtagtccttattctaagttctcagcaaactcctcgtttacaactgtagacctaggacctacccgtcttgacgtcaacctagaaactcctagatttaa 12814594  T
Q  696 gatcccatctcactaccactcaatcaatcacaacc 730  Q
    ||||| |||||||| || ||||||||| |||||||    
T  12814593 gatccaatctcacttcc-ctcaatcaaccacaacc 12814560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 375 - 679
Target Start/End: Original strand, 24384396 - 24384702
Alignment:
Q  375 tgaaactctggcatgttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaac 474  Q
    ||||| ||||||  ||||| ||||||||||| |||| || |||||||||||| |||||||| || |||||||||  ||||||||| ||| |  |||||||    
T  24384396 tgaaattctggcgcgttagttttcagatgttatatgcgacgttccaacaccagacacaaaagacgaatgttgaacttaatgttta-aacataatgctaac 24384494  T
Q  475 agaaataaata-aaatgc--aaacgtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggct 571  Q
    |  || ||||| |||| |  ||| |||||||| |||||||||||  | ||||| | ||||||||| || ||||||||||||||||| ||| ||| |||||    
T  24384495 aagaacaaatagaaatacgtaaaagtaaaagacaagaaagtaaatggaacaggtgaattgttaactcaattcggtgacaaacacacgtactctgggggct 24384594  T
Q  572 accaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaatt 671  Q
    ||||| ||| ||||  |||||| |||||||||||||||| ||||||||| |||||||||||||||| ||||  ||||||||| |||||| ||| ||| ||    
T  24384595 accaagccaggaagaaaatccactagtgtagtccttattctaagttctcagcaaactccaagtttacaacttaagacctagggcctacccgtagtgactt 24384694  T
Q  672 caacctag 679  Q
    ||||||||    
T  24384695 caacctag 24384702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 506 - 719
Target Start/End: Complemental strand, 1562558 - 1562345
Alignment:
Q  506 agaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcc 605  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||  || |||||||||| ||| ||||| |||||| |||||||||||    
T  1562558 agaaagtaaaaagcacaggaggtttgttaacccagttcggcgacaaacacacctactttgggggctaccaagccaggaaggaaatccactagtgtagtcc 1562459  T
Q  606 ttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatct 705  Q
    || || ||||||| | ||||| | ||| |||| ||||    |||||||||||||| ||| ||| |||||||||  |||||||| |||| |||||||||||    
T  1562458 ttgttttaagttcccagcaaatttcaaatttacaacttataacctaggacctacccgtactgacttcaacctaaaaactcctacatctgagatcccatct 1562359  T
Q  706 cactaccactcaat 719  Q
    |||| |||||||||    
T  1562358 cacttccactcaat 1562345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 399 - 727
Target Start/End: Original strand, 23249594 - 23249923
Alignment:
Q  399 agatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaatgca--aacg 496  Q
    ||||||||||||| || ||||||||||| ||||| | |||  |||||||||   ||||||||||| |   || |||||| ||||| | |||  |  ||      
T  23249594 agatgttctatgttatcttccaacaccagacacagattacggatgttgaataagatgtttagaacattaagcaaacagatataaacataataaagtaaaa 23249693  T
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| |||||    | ||||||||||| ||||||| |||   ||||||| ||| |||||||||| ||||||||| |||||| ||    
T  23249694 taaaagacaagaaagtaaaaggcacaacgagtttgttaacccaattcggtg-caacgtcacctactctgggggctaccaagccaagaaggaaatccacta 23249792  T
Q  597 gtgtagtccttattataagttc-tcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||||||||||  ||  |||||||   ||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |    
T  23249793 gtgtagtccttattataagtttatcaacaaactcattgtttgcaactctagacctaggaccaacctgtattgacttcaacctaggaactcctagatctga 23249892  T
Q  696 gatcccatctcactaccactcaatcaatcaca 727  Q
    |||||||||||||| || | ||||||||||||    
T  23249893 gatcccatctcacttcc-cacaatcaatcaca 23249923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 24091948 - 24092129
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||  |||||||||| ||| ||||| |||||| |||||||||||||||| || || |||| ||||||    
T  24091948 ttgttgacctagttcggtgacaaacacacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattctacagctctcagcaaac 24092047  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24092048 tcctcgtttaca-ctaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcacta 24092129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 567 - 727
Target Start/End: Complemental strand, 24850562 - 24850402
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtatt 666  Q
    |||||||||| | | ||||| |||||| |||||||||||||||| |||||| || |||||||||  ||||| |||||||||||||||| |||||  ||||    
T  24850562 gggctaccaagctaggaaggaaatccactagtgtagtccttattctaagttatcagcaaactcctcgtttacaactctagacctaggagctacccatatt 24850463  T
Q  667 gaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    || ||||| |||||||||||||||||||||||| |||||||||| |   ||||||||||||    
T  24850462 gatttcaatctaggaactcctagatctaagatctcatctcactatcctacaatcaatcaca 24850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 9996458 - 9996671
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| ||||||||||||  ||||| | | ||||||||||||||||||||||||||||||||| |||  | |||||||  || ||| | |||||| ||    
T  9996458 taaaagacaagaaagtaaaagacacagcaagtttgttaacccagttcggtgacaaacacacctactctggagactaccaagtcaggaatgaaatccacta 9996557  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
     ||||||||||||| || || |||| |||||||||   ||||  |||  |||||||||||||||| ||||||| |||||||||||||||||||| ||| |    
T  9996558 ttgtagtccttattctatagctctcagcaaactcctcattta-cactaaagacctaggacctacccgtattgatttcaacctaggaactcctaggtctga 9996656  T
Q  696 gatcccatctcacta 710  Q
    |||| ||||||||||    
T  9996657 gatcacatctcacta 9996671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 11221435 - 11221259
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| |||||||||||||| |||||      |||||||||||||||||| || || |||| ||||||    
T  11221435 ttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccaggaagg-----aaatagtgtagtccttattctatagctctcagcaaac 11221341  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  |||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  11221340 tcctcgttta-cactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 11221259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 588 - 709
Target Start/End: Complemental strand, 23864576 - 23864455
Alignment:
Q  588 aatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcct 687  Q
    |||||| |||||||||||||||| ||||||||| |||||||||  | ||| || ||||||||||||||||||| || |||| ||||||||||||||||||    
T  23864576 aatccactagtgtagtccttattctaagttctcagcaaactcctcgcttacaattctagacctaggacctacccgttttgacttcaacctaggaactcct 23864477  T
Q  688 agatctaagatcccatctcact 709  Q
    |||||| |||||||||||||||    
T  23864476 agatctgagatcccatctcact 23864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 395 - 608
Target Start/End: Original strand, 18753738 - 18753954
Alignment:
Q  395 tttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaa--tgca 492  Q
    |||||||||||||| |||||||| ||||| || ||| ||  ||  ||||||||||| ||| |||||||| || ||||||||  |||||| || |  ||||    
T  18753738 tttcagatgttctaagtgatgtttcaacatcagacataagttatgaatgttgaatgaaatttttagaacatcatgctaacaataataaacaagagatgca 18753837  T
Q  493 aac-gtaaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatc 591  Q
    ||| ||||| || |||||||||||| ||| ||||| ||||||||||||||||| ||||||| |||||||| ||  |||||| ||| ||||||||| |||     
T  18753838 aaccgtaaatgacaagaaagtaaaaggcataggagaattgttaacccagttcgatgacaaatacacctactctaagggctatcaagccaagaaggaaata 18753937  T
Q  592 caatagtgtagtcctta 608  Q
    || ||||||||||||||    
T  18753938 cagtagtgtagtcctta 18753954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 721
Target Start/End: Original strand, 12240229 - 12240425
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagt----ccttattataagttctcggca 624  Q
    ||||||||||||||||||||||||||||||||| | |  ||||||||||||| ||||| |||||  |||||||||    |||  || ||||||||| |||    
T  12240229 ttgttaacccagttcggtgacaaacacacctactccggaggctaccaaaccaggaaggaaatccgctagtgtagtccgacctagttctaagttctcagca 12240328  T
Q  625 aactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatca 721  Q
    ||||||||||||| ||||    ||||||   ||||  ||| ||| |||| |||||||||||||||| || ||||| ||||||||| |||||||||||    
T  12240329 aactccaagtttacaacttatcacctagctactactcgtactgacttcagcctaggaactcctagacctgagatctcatctcacttccactcaatca 12240425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 23541579 - 23541397
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||||||| ||| |||||||||||||  ||||| |||||| ||||||||| |||||| |  || |||| ||||||    
T  23541579 ttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccgggaaggaaatccactagtgtagtacttattcaatagctctcagcaaac 23541480  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||   |||||  ||| ||  |||||||||||||  |||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  23541479 tcgccgttta-cactatattacctaggacctactcgtatagaattcaacctaggaactcctagatctgagatcctatctcacta 23541397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 554 - 709
Target Start/End: Complemental strand, 13660514 - 13660360
Alignment:
Q  554 acacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactcta--gaccta 651  Q
    |||||||| ||| |||||||||||| | ||| | |||||| |||||||||| ||||| |||| |||| |||||||||  |||||   |||||  |||||     
T  13660514 acacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattctaagctctcagcaaactcctcgttta---ctctaaagacctg 13660418  T
Q  652 ggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||    
T  13660417 ggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 13660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 554 - 709
Target Start/End: Complemental strand, 13719157 - 13719003
Alignment:
Q  554 acacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaactccaagtttagaactcta--gaccta 651  Q
    |||||||| ||| |||||||||||| | ||| | |||||| |||||||||| ||||| |||| |||| |||||||||  |||||   |||||  |||||     
T  13719157 acacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattctaagctctcagcaaactcctcgttta---ctctaaagacctg 13719061  T
Q  652 ggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||    
T  13719060 ggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 13719003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 548 - 710
Target Start/End: Original strand, 22476240 - 22476403
Alignment:
Q  548 acaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta- 645  Q
    ||||||||||||||  || |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||| |||||||||  ||||| | || ||     
T  22476240 acaaacacacctactttgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttaca-ctatat 22476338  T
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||||||  ||| || |||||||||||||||||||||| | ||||||||||||||||    
T  22476339 gacctaggacctacccatatagacttcaacctaggaactcctagatttgagatcccatctcacta 22476403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 20255051 - 20254862
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattat-aagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||  |||  || |||||||||| | | ||||| |||||| |||||| ||||||||| | |||||||| ||||||    
T  20255051 ttgttgacccagttcggtgacaaacacatgtactatgggggctaccaagctaggaaggaaatccactagtgtggtccttattctaaagttctcagcaaac 20254952  T
Q  628 tccaagtttagaactctagacc-------taggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| ||||  |||||       ||||||||||| || | || |||||||||||||||||||||||| | ||||||||||||||    
T  20254951 tcctcgtttacaactgaagacctaggacgtaggacctacccgtctagacttcaacctaggaactcctagatctgacatcccatctcacta 20254862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 25240396 - 25240578
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||||||||||||||||||||||||   | |||||||||||||| ||||| ||||||  ||||||||||||||| | ||| |||| ||||||    
T  25240396 ttgtttacccagttcggtgacaaacacacctaccaagggggctaccaaaccaggaaggaaatccaccagtgtagtccttattcaaaagctctcagcaaac 25240495  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   ||||  ||| || ||||||||||||||| || | || ||||||||| ||||||||||||||  |||| ||||| ||||    
T  25240496 tccttcttta-cactttacgacctaggacctacccgtctagacttcaacctaagaactcctagatctgcgatctcatcttacta 25240578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 33977049 - 33977230
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||| |||||| ||||||| ||| ||||||||||  ||  |||| |||||| |||||||||||||||| || || |||| ||||||    
T  33977049 ttgttgacccagttcggtaacaaacgcacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctcagcaaac 33977148  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  |||||||| ||||||| ||||  | ||||| |||||||||||||||||| ||||  ||||||||||    
T  33977149 tccttgttta-cactaaagacctagaacctacccgtatatacttcaatctaggaactcctagatctgagatatcatctcacta 33977230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 33466327 - 33466149
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||| ||||||||||| |||   ||||||| ||| |||||||||| ||| ||||  |||||| |||||||||||||||| | ||| |||| ||||||    
T  33466327 ttgttaatccagttcggtg-caacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaaaagctctcagcaaac 33466229  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    | |  |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||||||||||| ||| |||||||||||    
T  33466228 ttctcgttt-gcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgaga-cccatctcact 33466149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 555 - 709
Target Start/End: Complemental strand, 37155668 - 37155513
Alignment:
Q  555 cacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactcta-gacctag 652  Q
    ||||||| ||| |||||||||| ||| ||||| ||| || ||||||| ||||||||  | || |||| |||||||||  |||| | ||| || |||||||    
T  37155668 cacctactctgggggctaccaagccaggaaggaaattcactagtgtaatccttattcaatagctctcagcaaactcctcgttt-gcactatatgacctag 37155570  T
Q  653 gacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||||||| ||| ||| ||||||||||||||||| |||||| |||||||||||||||    
T  37155569 gacctacccgtactgacttcaacctaggaactccaagatctgagatcccatctcact 37155513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 555 - 709
Target Start/End: Original strand, 8726861 - 8727015
Alignment:
Q  555 cacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctagg 653  Q
    ||||||| ||| |||||||||| ||| ||||| |||||| ||||||||||| ||||  | || |||| |||||||||  |||| | |||   ||||||||    
T  8726861 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccatattcaatagctctcagcaaactcctcgttt-gcactaacgacctagg 8726959  T
Q  654 acctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||| ||| ||| ||||||||| |||||||||||||| ||||| |||||||||    
T  8726960 acctacccgtaatgacttcaacctatgaactcctagatctgagatctcatctcact 8727015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 17880907 - 17880727
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcggg-ctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    ||||||||||||||||||| |||   ||||||| ||| ||| ||||||| ||||||||| |||||| ||||||||| ||||||  | || |||| |||||    
T  17880907 ttgttaacccagttcggtg-caacgtcacctactctggggggctaccaagccaagaaggaaatccactagtgtagttcttattcaatagctctcagcaaa 17880809  T
Q  627 ctccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||  |||| | |||   ||||||||| | ||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||    
T  17880808 ctcctcgttt-gcactaatgacctaggaacgacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 17880727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 555 - 712
Target Start/End: Original strand, 39080982 - 39081139
Alignment:
Q  555 cacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctagg 653  Q
    ||||||| ||| |||||||||| ||| ||||| |||||| ||||||||||||||||  | || ||||  ||||||||   ||| | |||   |||||||     
T  39080982 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcattt-gcactaatgacctaga 39081080  T
Q  654 acctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactacc 712  Q
    ||||||| ||| ||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  39081081 acctacccgtactgacttcaacctaggaactactagatctgagatcccatctcactacc 39081139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 645 - 710
Target Start/End: Original strand, 45136222 - 45136287
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||||||| |||| || |||||||||||||||||||||| | ||||||||||||||||    
T  45136222 agacctaggacctacccgtatagacttcaacctaggaactcctagatatgagatcccatctcacta 45136287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 529 - 603
Target Start/End: Original strand, 45133655 - 45133729
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagt 603  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||| ||| ||| ||||| |||||| |||||||||    
T  45133655 ttgttgacccagttcggtgacaaacacacctactctgggggctatcaagccaggaaggaaatccactagtgtagt 45133729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 710
Target Start/End: Complemental strand, 27925498 - 27925433
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||| ||||||||||| |||| || |||| ||||||||||||||||||| ||||||||||||||||    
T  27925498 agacataggacctacccgtatagacttcatcctaggaactcctagatctgagatcccatctcacta 27925433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 508 - 707
Target Start/End: Original strand, 17279859 - 17280057
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    ||||||||| ||||||   | ||||||||||||||||||| |||   ||||||| ||| ||| |||||| ||| ||||| |||||| ||||||||| | |    
T  17279859 aaagtaaaaggcacagagagtttgttaacccagttcggtg-caacgtcacctactctgggggataccaagccaggaaggaaatccactagtgtagttcgt 17279957  T
Q  608 attata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctc 706  Q
    |||  | || |||  |||||||||  |||| | |||   |||||||||||||||  || ||| ||||||||||||||| |||||||| ||||||||||||    
T  17279958 attcaatagctctaagcaaactcctcgttt-gcactaatgacctaggacctacccatactgacttcaacctaggaacttctagatctgagatcccatctc 17280056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 709
Target Start/End: Original strand, 1683937 - 1684146
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||||||||||| ||||| || | ||||||||||| ||||||| |||   ||||||| ||| | |||||||| ||| || || |||||| ||    
T  1683937 taaaagacaagaaagtaaaaggcacaagaagtttgttaacccaattcggtg-caacgtcacctactctg-gcgctaccaagccagga-ggaaatccacta 1684033  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||| |  |  || | |||||||||  ||||| | ||  ||||||||| | |||| || |||| ||||||||| |||||||||| ||| |    
T  1684034 gtgtagtccttattctctaactcccagcaaactcctcgtttaca-ctaaagacctaggtcatacccgtcttgacttcaacctaagaactcctagttctga 1684132  T
Q  696 gatcccatctcact 709  Q
    ||||||||||||||    
T  1684133 gatcccatctcact 1684146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 472
Target Start/End: Complemental strand, 24850762 - 24850661
Alignment:
Q  371 taactgaaactctggcatgttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgc 470  Q
    ||||||||| || |||| | |||||| ||||| || |||  |||||||||||| || ||||||| ||   ||||||||||||||||||| ||| ||||||    
T  24850762 taactgaaattccggcaggctagcttacagatattttatacgatgttccaacatcagacacaaattaaggatgttgaatgtaatgtttacaacatcgtgc 24850663  T
Q  471 ta 472  Q
    ||    
T  24850662 ta 24850661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 710
Target Start/End: Original strand, 22485266 - 22485306
Alignment:
Q  670 ttcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  22485266 ttcaacctaagaactcctagatctgagatcccatctcacta 22485306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 670 - 706
Target Start/End: Original strand, 33961873 - 33961909
Alignment:
Q  670 ttcaacctaggaactcctagatctaagatcccatctc 706  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33961873 ttcaacctaggaactcctagatctgagatcccatctc 33961909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 33961752 - 33961833
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||| |||||||||||| |||||| ||||||| ||| |||||||||   || ||||| |||| | ||||||||||| ||||    
T  33961752 ttgttgacccagttcggtaacaaactcacctactctgggggctaccacgtcaggaaggaaatcaactagtgtagtccgtatt 33961833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 1e-46; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 519 - 730
Target Start/End: Original strand, 31649672 - 31649880
Alignment:
Q  519 cacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttc 618  Q
    |||| ||| |||||||| ||||||||||||||||||||||||| ||| || ||||||| ||| ||||| |||||| | |||||||||||||| || ||||    
T  31649672 cacatgagaattgttaatccagttcggtgacaaacacacctactctg-ggtctaccaagccaggaaggaaatccactcgtgtagtccttattcta-gttc 31649769  T
Q  619 tcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaa 718  Q
    || |||||||||  ||||| |||||||||||||||||||||| || |||| |||||||||| || ||||| |||| ||||||||||||||| || |||||    
T  31649770 tcagcaaactcctcgtttacaactctagacctaggacctacccgtcttgacttcaacctagaaaatcctatatctgagatcccatctcacttcc-ctcaa 31649868  T
Q  719 tcaatcacaacc 730  Q
    ||||||||||||    
T  31649869 tcaatcacaacc 31649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 295451 - 295632
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| || || |||| ||||||    
T  295451 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaac 295550  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  |||||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  295551 tcctcgttta-cactaaagacctaggacctacccgtattgatttcaacttaggaactcctagatctgagatcccatctcacta 295632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 6581034 - 6580853
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||||||||||||||||| |||  ||||||||| |||  |||| |||||| |||||||||||||||| || || |||| ||||||    
T  6581034 ttgttaacccagttcggtgacaaacacacctactctgaaggctaccaagccagcaaggaaatccactagtgtagtccttattctatagctctcagcaaac 6580935  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  6580934 tcctcgtttaca-ctaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcacta 6580853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 28051127 - 28051308
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||||| ||| ||||| ||||||||||||||||||||||| || || |||| ||||||    
T  28051127 ttgttgacccagtttggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattctatagctctcagcaaac 28051226  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  |||  || |||||||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  28051227 tcctcgttta-cactaaaggcctaggacatacctgtattgatttcaacctaggaactcctagatctgagatctcatctcacta 28051308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 497 - 710
Target Start/End: Complemental strand, 17042953 - 17042740
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| |||| ||||||| |||||  | | ||||||| |||||| |||||||||||||||||| |||  |||||||||  || ||||| |||||| ||    
T  17042953 taaaagacaagagagtaaaaggcacaacaagtttgttaaaccagtttggtgacaaacacacctactctggaggctaccaaggcaggaaggaaatccacta 17042854  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    |||||||||||||| || || ||||  ||||||||  ||||| ||||  |||||||||||||||| ||||||| ||||||| |||||||||||||||| |    
T  17042853 gtgtagtccttattctatagctctcaacaaactcctcgttta-aactaaagacctaggacctacccgtattgatttcaacccaggaactcctagatctga 17042755  T
Q  696 gatcccatctcacta 710  Q
    |||||||||||||||    
T  17042754 gatcccatctcacta 17042740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 15686325 - 15686145
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattat-aagttctcggcaaac 627  Q
    ||||| |||||||||| |||||||||||||||| ||  |||||||||| ||| ||||| |||||| |||||||||||||||| | |||||||| |||||     
T  15686325 ttgttgacccagttcgatgacaaacacacctactctaggggctaccaagccaggaaggaaatccattagtgtagtccttattctaaagttctcagcaaa- 15686227  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     ||| ||||| ||||  ||||||| ||||||||||| | || ||||||| |||||||||||||||| ||||||||||||||||    
T  15686226 -ccacgtttacaacttaagacctatgacctacctgtctagacttcaacccaggaactcctagatctgagatcccatctcacta 15686145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 287060 - 286878
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaac 627  Q
    ||||||||| |||||| |||||||||||| |||  || || ||||||||||| ||||| |||||| |||| ||||||||||| ||| |||||| | ||||    
T  287060 ttgttaacctagttcgatgacaaacacacttactatggggactaccaaaccaggaaggaaatccactagtatagtccttattctaatgttctcaggaaac 286961  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| ||| | |||||||||||||||| || | || |||||||||||||||||||||||| ||||||||||||||||    
T  286960 tccttgtttataacacaagacctaggacctacccgtctagatttcaacctaggaactcctagatctgagatcccatctcacta 286878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 13790670 - 13790852
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||||||||||||||||||  || |||||||||| ||||||||| |||  | ||||||||||||||||  | || |||| ||||||    
T  13790670 ttgttgacccagttcggtgacaaacacacctactatgggggctaccaagccaagaaggaaatatactagtgtagtccttattcaatagctctcagcaaac 13790769  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  13790770 tcctcgtttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 13790852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 17702397 - 17702579
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||||||||||||||||||| |||| ||| |||||||||| ||| ||||| |||||| |||||||||||||||| |  || |||| ||||||    
T  17702397 ttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 17702496  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || ||||||||||||||| |||| || || ||||||||||||||||||||| ||||||||||||||||    
T  17702497 tcctcgttta-cactatatgacctaggacctacccgtatagacttaaacctaggaactcctagatctgagatcccatctcacta 17702579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 18547639 - 18547821
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||| ||||||||||||||||||||||| |  || ||| |||||||    
T  18547639 ttgttgacccaattcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattcaatagctcttggcaaac 18547738  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  |||||  ||| || |||||| |||||||| |||| || |||||||||||||||| ||||||||||||||||||| ||||    
T  18547739 tcctcgttta-cactatatgacctaagacctacccgtatagacttcaacctaggaactcatagatctaagatcccatcttacta 18547821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 24195515 - 24195696
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| |||||||||||||| |||||||||||| ||| |||||||||| ||||||||| |||||| |||||||||||||||| |  || |||| ||||||    
T  24195515 ttgttgacccagttcggtgaaaaacacacctactctg-gggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 24195613  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   ||||  ||| || ||||||||| |||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  24195614 tcctcattta-cactatatgacctaggagctacctgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 24195696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 527 - 709
Target Start/End: Complemental strand, 3552383 - 3552202
Alignment:
Q  527 gattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaa 626  Q
    ||||||||| ||||||||||||||||| ||||||| ||  |||||||||| ||| ||||  |||||| |||||||||||||||| ||||||||   ||||    
T  3552383 gattgttaatccagttcggtgacaaacgcacctactcttggggctaccaagccaggaagaaaatccagtagtgtagtccttattctaagttctaaacaaa 3552284  T
Q  627 ctccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||  ||||| ||||||||||||| |||||||  || |||| |||||| ||||||||||| ||||| |||| ||||||||||    
T  3552283 ctcctcgtttacaactctagacctaagacctactcgtcttgacttcaacttaggaactccttgatctgagat-ccatctcact 3552202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 18035063 - 18034882
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||||||||||||||||| ||   ||||||||| ||| ||||| |||||| |||||||||||||||| || || |||| ||||||    
T  18035063 ttgttaacccagttcggtgacaaacacacctactcttgaggctaccaagccaggaaggaaatccactagtgtagtccttattctataggtctcagcaaac 18034964  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   ||||  ||   |||||||||||||||| ||||  | |||||||||||||||||||||||| ||||||||||||||||    
T  18034963 tcctcattta-caccaaagacctaggacctacccgtatctatttcaacctaggaactcctagatctgagatcccatctcacta 18034882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 18064373 - 18064192
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||||||||||||||||| ||   |||||||||  || ||||| |||||| |||||||||||||||| || || ||||  |||||    
T  18064373 ttgttaacccagttcggtgacaaacacacctactctagaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagctctcaacaaac 18064274  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | ||  |||||||||||||| | ||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  18064273 tcctcgtttaca-ctaaagacctaggacctaaccgtattgatttcaacctaggaactcctagatctgagatctcatctcacta 18064192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 9036699 - 9036878
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||| ||| ||| |||||||||||||| ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  9036699 ttgttaacccagttcggtg-caacatcacatactctgggggctaccaaaccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 9036797  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| | |||  |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  9036798 tcctcgttt-gcactaaagacctaggacctacccgtattgacttcaacctaggaactcctagatctgagatcccatctcact 9036878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 508 - 721
Target Start/End: Complemental strand, 14406818 - 14406604
Alignment:
Q  508 aaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcctt 607  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||  || |||||||||| ||| ||||| ||||||  | ||||||| ||    
T  14406818 aaagtaaaaggcacatgaggtttgttaacccagttcggtgacaaacacacctactttgtgggctaccaagccaggaaggaaatccaccaatgtagtcttt 14406719  T
Q  608 attat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctc 706  Q
     |||| ||||| ||  |||| ||||| |||| |||     | |||| ||||||| ||| |||  |||||||| |||||||||||||| ||||||||||||    
T  14406718 gttataaagttttcatcaaattccaaatttacaacgtacaatctagaacctacccgtactgacctcaacctaagaactcctagatctgagatcccatctc 14406619  T
Q  707 actaccactcaatca 721  Q
    ||| |||||||||||    
T  14406618 acttccactcaatca 14406604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 537 - 710
Target Start/End: Complemental strand, 23954717 - 23954543
Alignment:
Q  537 ccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtt 635  Q
    ||||||||||| ||||||||||||| |||  ||||||||| ||| ||||| |||||| |||| ||||| |||||  | || |||| |||||||||  |||    
T  23954717 ccagttcggtggcaaacacacctactctggaggctaccaagccaggaaggaaatccattagtttagtcattattcaatagctctcagcaaactcctcgtt 23954618  T
Q  636 tagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    || | || || ||||||||||||||||||||  | |||||||||||||||||||||| | ||||||||||||||||    
T  23954617 taca-ctatatgacctaggacctacctgtatatacttcaacctaggaactcctagatttgagatcccatctcacta 23954543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 9031548 - 9031369
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| ||||||||||  || ||||| |||||| ||||||||||||||||  | || |||| ||||||    
T  9031548 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 9031450  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| |  ||   ||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  9031449 tcctcgttt-gtgctaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 9031369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 535 - 710
Target Start/End: Complemental strand, 15636035 - 15635859
Alignment:
Q  535 acccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaactccaag 633  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||| ||||| ||| || |||||||||||||||| |  || |||| | |||||||  |    
T  15636035 acccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcaatagctctcagtaaactcctcg 15635936  T
Q  634 tttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||  ||| || || |||||||||||| |||| || ||||| |||||||||||||||| | |||||||||| |||||    
T  15635935 ttta-cactatatgatctaggacctacccgtatagacttcaaactaggaactcctagatatgagatcccatcacacta 15635859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 547 - 710
Target Start/End: Complemental strand, 21094850 - 21094688
Alignment:
Q  547 gacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaactccaagtttagaactcta 645  Q
    ||||||||||||||| ||| ||||||||||  || ||||| ||| || |||||||||||||||| ||| |||||| | ||||  || ||||| ||||  |    
T  21094850 gacaaacacacctactctg-gggctaccaagtcaggaaggaaattcactagtgtagtccttattctaaagttctcagtaaac--cacgtttacaacttaa 21094754  T
Q  646 gacctaggacctacctgtattgaa-ttcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| || | ||| |||||||||||||||||||||||| ||||||| ||||||||    
T  21094753 gacctaggacctacccgtctagaacttcaacctaggaactcctagatctgagatcccgtctcacta 21094688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 707
Target Start/End: Original strand, 44452471 - 44452650
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    ||||| |||||||||||||||||||||||||||  ||  ||||| |||| ||| ||||| |||||| ||||||||| ||||||  | || |||| |||||    
T  44452471 ttgttgacccagttcggtgacaaacacacctacgtctaggggct-ccaagccaggaaggaaatccactagtgtagttcttattcaatagctctcagcaaa 44452569  T
Q  627 ctccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctca 707  Q
    ||||  ||||| | || || |||| | |||||||| |||| || |||||||||||||||||||||||| |||||||||||||    
T  44452570 ctcctcgtttaca-ctatatgacccatgacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctca 44452650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 633 - 727
Target Start/End: Complemental strand, 215409 - 215316
Alignment:
Q  633 gtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    ||||| ||| |||||||||| ||||||| ||||||| ||||||||||||||| |||||| | ||||| ||||||||| || ||||||||||||||    
T  215409 gtttacaaccctagacctagaacctacccgtattgacttcaacctaggaacttctagatatgagatctcatctcacttcc-ctcaatcaatcaca 215316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 588 - 704
Target Start/End: Complemental strand, 7496037 - 7495921
Alignment:
Q  588 aatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcc 686  Q
    |||||| |||||||||||||||| |  || |||| |||||||||  ||||| | ||  ||||||||||||||||  |||||| |||||||||||||||||    
T  7496037 aatccactagtgtagtccttattctctagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccatattgacttcaacctaggaactcc 7495939  T
Q  687 tagatctaagatcccatc 704  Q
    ||||||| ||||||||||    
T  7495938 tagatctgagatcccatc 7495921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 13917835 - 13918013
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||| ||||||| |||   ||||||| ||| |||||||||| ||| ||||| |||||||||||||| |||||||| |  || |||| |||||     
T  13917835 ttgttaacccaattcggtg-caacgtcacctactctgggggctaccaagcca-gaaggaaatccaatagtgtactccttattctctagctctcagcaaat 13917932  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  ||||| | ||  |||||||||||||||||||  ||| |||||||||||||||||||||| | ||||  |||||||||    
T  13917933 tcctcgtttaca-ctaaagacctaggacctacctgtcctgacttcaacctaggaactcctagatatgagatttcatctcact 13918013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 730
Target Start/End: Complemental strand, 980532 - 980333
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaac 627  Q
    ||||| ||| ||||| | ||||||||||||||   || |||||||||| | | ||||| |||||| |||||||||||||||  ||| ||| || | ||||    
T  980532 ttgttgacctagttcagagacaaacacacctattttgggggctaccaagcaaggaaggaaatccactagtgtagtccttatactaaagttttcagtaaac 980433  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
      || ||||| ||||  |||| ||| |||||||||| | || |||||||||| ||||||||||||||||||| |||||||| | |   ||||||||||||    
T  980432 --cacgtttacaacttaagacatagaacctacctgtctagacttcaacctag-aactcctagatctaagatctcatctcacgatcctacaatcaatcaca 980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 706
Target Start/End: Complemental strand, 7479434 - 7479128
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaa---taaataaaatgcaaacgt 497  Q
    |||||||||| |||||||||||||||  || | |  ||| ||||||||||  ||||||||||| |||||||| ||| ||   |||| ||||    || ||    
T  7479434 atgttctatgcgatgttccaacaccaggcatagataacatatgttgaatgagatgtttagaacatcgtgctagcagtaaacataaacaaaacaacaaagt 7479335  T
Q  498 aaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatag 597  Q
    |||||| |||||||| ||| |||||    | |||||||| |||||||||| |||   | ||||  ||| |||||||||| ||| || || |||||| |||    
T  7479334 aaaagacaagaaagtgaaaagcacaaagagtttgttaactcagttcggtg-caacgtcgcctaatctgggggctaccaagccagga-ggaaatccactag 7479237  T
Q  598 tgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaag 696  Q
    ||||||||||||| |  || |||| |||||||||  ||||| | ||  ||||||||||||||||  |||||| |||||| || ||| |||||||||| ||    
T  7479236 tgtagtccttattctctagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccatattgacttcaacatatgaagtcctagatctgag 7479138  T
Q  697 atcccatctc 706  Q
    ||||||||||    
T  7479137 atcccatctc 7479128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 18476890 - 18477101
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaat 595  Q
    ||||||| |||||||||||| |||||    | |||||||||||||||||  |||| | |||||||| ||| |||||||||| ||| ||||| |||||| |    
T  18476890 taaaagacaagaaagtaaaaggcacaaagagtttgttaacccagttcggc-acaa-ctcacctacatctg-gggctaccaagccaggaaggaaatccact 18476986  T
Q  596 agtgtagtccttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatcta 694  Q
    ||||||||||||||| | ||| |||| |||||||||  |||||  |||  |||| || |||||||  |||| || ||||| |||||||||||||||| |     
T  18476987 agtgtagtccttattctaaagctctcagcaaactcctcgttta-cacttaagacataagacctactcgtatagacttcaaactaggaactcctagatttg 18477085  T
Q  695 agatcccatctcacta 710  Q
    |||||||| |||||||    
T  18477086 agatcccacctcacta 18477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 529 - 630
Target Start/End: Complemental strand, 13524848 - 13524747
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| |||||||||||| ||||| |||||||| ||| ||||||||||  |||||||| |||||| | |||||||||||||| || ||||||| ||||||    
T  13524848 ttgttgacccagttcggtcacaaa-acacctactctgggggctaccaagtcaagaaggaaatccactggtgtagtccttattctatagttctcagcaaac 13524750  T
Q  628 tcc 630  Q
    |||    
T  13524749 tcc 13524747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 545 - 710
Target Start/End: Complemental strand, 21719076 - 21718912
Alignment:
Q  545 gtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataa-gttctcggcaaactccaagtttagaactc 643  Q
    ||||||||||||||||| ||  || ||||||| ||| ||||| |||||| |||||||||||||||| ||| ||| ||  |||| |||  ||||| | ||     
T  21719076 gtgacaaacacacctactctaagg-ctaccaagccaggaaggaaatccactagtgtagtccttattctaaagttttcaacaaaatcctcgtttaca-ctt 21718979  T
Q  644 tagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     |||||||||| ||||| || | || || ||||||||||||||||||||| ||||| ||||||||||    
T  21718978 aagacctaggatctacccgtctagactttaacctaggaactcctagatctgagatctcatctcacta 21718912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 8224799 - 8225008
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctaca-ctgcgggctaccaaaccaagaaggtaatccaat 595  Q
    ||||||| |||||||||||| |||||  | | |||||||||||||| |  |  |||| |||||||| ||| |||||||||| ||| ||||| |||||| |    
T  8224799 taaaagacaagaaagtaaaaggcacacaaagtttgttaacccagtttg--gcaaaactcacctacatctgggggctaccaagccaggaaggaaatccact 8224896  T
Q  596 agtgtagtccttatt-ataagttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatct 693  Q
    ||||||||||||||| |  || |||| |||||||||  |||||  ||| || |||||| |||||||| |||| |  |||||||||||||||||    |||    
T  8224897 agtgtagtccttattcaatagctctcagcaaactcctcgttta-cactatatgacctaagacctacccgtatagtcttcaacctaggaactcc----tct 8224991  T
Q  694 aagatcccatctcacta 710  Q
     ||||||||||||||||    
T  8224992 gagatcccatctcacta 8225008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 710
Target Start/End: Complemental strand, 18483421 - 18483357
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||| |||| || |||||||||||||| ||| ||||| ||||||||||||||||    
T  18483421 gacctaggacctacccgtatagacttcaacctaggaacacctggatctgagatcccatctcacta 18483357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 595 - 710
Target Start/End: Complemental strand, 21254095 - 21253979
Alignment:
Q  595 tagtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatct 693  Q
    |||||||||||||||| || |||||||  ||||||||  ||| | ||||  ||||||||||||||||||| | || |||||||||||||||  |||||||    
T  21254095 tagtgtagtccttattctatagttctcaacaaactcctcgttcacaactaaagacctaggacctacctgtctagacttcaacctaggaacttttagatct 21253996  T
Q  694 aagatcccatctcacta 710  Q
     ||||| ||||| ||||    
T  21253995 gagatctcatctaacta 21253979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 727
Target Start/End: Complemental strand, 3445172 - 3444976
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagttctcggcaaact 628  Q
    |||||||| ||||| ||||| |||||||||||| |||  ||||| |||  || ||||| |||||| |||||||||| |  || |||||||||  ||||||    
T  3445172 ttgttaactcagtttggtgataaacacacctactctg-aggctatcaagtcaggaaggaaatccactagtgtagtcttagttctaagttctcaacaaact 3445074  T
Q  629 ccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
     |||||||| ||||    ||||||   |||||  |||||| |||||||||||| || |||||||| |||| ||||||||||  | ||||| ||||||||    
T  3445073 gcaagtttacaacttatcacctagacactacccatattgacttcaacctaggagctactagatctgagat-ccatctcactttccctcaaccaatcaca 3444976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 709
Target Start/End: Original strand, 13913751 - 13913961
Alignment:
Q  497 taaaagataagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaata 596  Q
    ||||||| ||||||||||||  |||||   | |||||||||| |||||||| |||   ||||||| ||| |||||||||| ||| || || |||||  ||    
T  13913751 taaaagacaagaaagtaaaaaacacagagagtttgttaacccggttcggtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccgcta 13913848  T
Q  597 gtgtagtccttattata-agttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaa 695  Q
    ||||| |||||||| |  || |||| |||||||||  ||||| | ||  |||||||||| ||||| || || | |||||||||||||||||||||||| |    
T  13913849 gtgtactccttattctctagctctcagcaaactcctcgtttaca-ctaaagacctaggatctacccgttttaacttcaacctaggaactcctagatctga 13913947  T
Q  696 gatcccatctcact 709  Q
    |||  |||||||||    
T  13913948 gatttcatctcact 13913961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 610
Target Start/End: Complemental strand, 19532039 - 19531970
Alignment:
Q  541 ttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    |||||||||||||||||||||  || |||||||||| ||| ||||| |||||| |||||| |||||||||    
T  19532039 ttcggtgacaaacacacctactttgggggctaccaagccaggaaggaaatccactagtgtcgtccttatt 19531970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 709
Target Start/End: Complemental strand, 11558501 - 11558311
Alignment:
Q  513 aaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-a 611  Q
    |||||||||||   | ||||||||| ||||||||||| |||||||||||  ||  ||||||||| ||| ||||| |||||| ||||||| ||| |||| |    
T  11558501 aaaatgcacagagagtttgttaaccaagttcggtgac-aacacacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattca 11558403  T
Q  612 taagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
     ||| | || |||||  ||| |||| | |||   |||||||||||||||   | ||| |||||||||||||||||||||| | |||||||||||||||    
T  11558402 aaagctttcagcaaa--ccacgttt-gcactaatgacctaggacctacc---actgatttcaacctaggaactcctagatttgagatcccatctcact 11558311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 709
Target Start/End: Complemental strand, 11567770 - 11567580
Alignment:
Q  513 aaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-a 611  Q
    |||||||||||   | ||||||||| ||||||||||| |||||||||||  ||  ||||||||| ||| ||||| |||||| ||||||| ||| |||| |    
T  11567770 aaaatgcacagagagtttgttaaccaagttcggtgac-aacacacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattca 11567672  T
Q  612 taagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
     ||| | || |||||  ||| |||| | |||   |||||||||||||||   | ||| |||||||||||||||||||||| | |||||||||||||||    
T  11567671 aaagctttcagcaaa--ccacgttt-gcactaatgacctaggacctacc---actgatttcaacctaggaactcctagatttgagatcccatctcact 11567580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 710
Target Start/End: Original strand, 11655980 - 11656194
Alignment:
Q  497 taaaagataagaaagtaaa-atgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaat 595  Q
    ||||||| ||||||||||| | ||| |||| | |||||||||||||| |||| |||   ||||||| |||  |||||||||  || ||| | ||| || |    
T  11655980 taaaagacaagaaagtaaacaggcataggaagtttgttaacccagtttggtg-caatgtcacctactctggaggctaccaagtcaggaaagaaattcact 11656078  T
Q  596 agtgtagtccttatt-ataagttctcggcaaactccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatct 693  Q
    ||||||||||||||  | ||| |||| |||||||||  ||||| | || || |||||||||||| || |||| |  |||||||||||||||||||||| |    
T  11656079 agtgtagtccttatccaaaagctctcagcaaactcctcgtttaca-ctttatgacctaggacctgcccgtatagccttcaacctaggaactcctagattt 11656177  T
Q  694 aagatcccatctcacta 710  Q
     || |||||||||||||    
T  11656178 gagttcccatctcacta 11656194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 709
Target Start/End: Original strand, 8749147 - 8749210
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||||| ||||| ||| | | |||||||||||||||||||||||| ||||| |||||||||    
T  8749147 gacctaggatctacccgtactaacttcaacctaggaactcctagatctgagatctcatctcact 8749210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 472
Target Start/End: Original strand, 13917721 - 13917792
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgcta 472  Q
    |||||||||| |||||||||||||||  |||| |  ||||||||||||||  ||||||||||| ||||||||    
T  13917721 atgttctatgcgatgttccaacaccaggcacatataacaaatgttgaatgagatgtttagaacatcgtgcta 13917792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 687
Target Start/End: Original strand, 19633878 - 19634035
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||| | |||||||||| |||| ||  |||||||||| ||| ||||| |||||| |||||||||||||||| || || |||| ||||||    
T  19633878 ttgttgacctagttcagcgacaaacacatctactcta-gggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaac 19633976  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcct 687  Q
    |||  |||||  |||  |||  ||||||||||| |||| || ||||||||| ||||||||    
T  19633977 tcctcgttta-cactaaagatataggacctacccgtatagacttcaacctaagaactcct 19634035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 649 - 727
Target Start/End: Complemental strand, 13100770 - 13100693
Alignment:
Q  649 ctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||||||||||| || |||| ||||| ||||||||| |||||||| |||||| |||||||| || ||||||||| ||||    
T  13100770 ctaggacctacccgtcttgacttcaatctaggaacttctagatctgagatcctatctcacttcc-ctcaatcaaccaca 13100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 610
Target Start/End: Complemental strand, 1919403 - 1919323
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||| |||||||||  ||||||||||||||||  || |||||||||| ||||||||| |||||| |  |||||||||||||    
T  1919403 ttgttgacccagttccatgacaaacacacctactatg-gggctaccaagccaagaaggaaatccactgatgtagtccttatt 1919323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 673 - 710
Target Start/End: Complemental strand, 13515619 - 13515582
Alignment:
Q  673 aacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  13515619 aacctaggaactcctagatctgagatcccatctcacta 13515582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Complemental strand, 12054500 - 12054454
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagat 691  Q
    |||||| |||||||||||| |||| |||||||||| |||||||||||    
T  12054500 agaccttggacctacctgtcttgacttcaacctagaaactcctagat 12054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 710
Target Start/End: Complemental strand, 1919286 - 1919229
Alignment:
Q  653 gacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||| |||| |  ||||||||||||||||||| || | ||||||||||||||||    
T  1919286 gacctacccgtatagttttcaacctaggaactcctaaatatgagatcccatctcacta 1919229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 512 - 722
Target Start/End: Complemental strand, 10221 - 10012
Alignment:
Q  512 taaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatta 611  Q
    ||||| ||||||||| ||||||||||||||||||||||||| |||| ||| ||  ||||||||||  ||  |||| |||||| |||||||||||||||      
T  10221 taaaaggcacaggagaattgttaacccagttcggtgacaaatacacttactcttggggctaccaagtcagaaaggaaatccactagtgtagtccttatac 10122  T
Q  612 taagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactac 711  Q
    ||| |||||  ||||||||  ||||| |||||||||||||||||||| | || |||| ||||||| |||||||||||||||| ||||| ||||||||| |    
T  10121 taacttctcaccaaactccttgtttacaactctagacctaggacctatccgtcttgacttcaaccgaggaactcctagatctgagatctcatctcacttc 10022  T
Q  712 cactcaatcaa 722  Q
    | |||||||||    
T  10021 c-ctcaatcaa 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 36996 - 37178
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||||||| |||  ||||||||| ||| ||||| |||||| |||||||||||||||| |  || |||| ||||||    
T  36996 ttgttgacccagttcggtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 37095  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | |    ||||||||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  37096 tcctcgtttacaccatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 37178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 518 - 730
Target Start/End: Original strand, 13587 - 13799
Alignment:
Q  518 gcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattataagtt 617  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| ||  |||||||||| ||| ||||  ||| || ||||||||| ||  || ||||||    
T  13587 gcacaggaggtttgttaatccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaattcattagtgtagttctagttctaagtt 13686  T
Q  618 ctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactca 717  Q
    ||| ||||| |||||||||| ||||    |||| |   ||||| ||||||| |||||||||||||||| |||| || ||||| ||||||||| || ||||    
T  13687 ctcagcaaattccaagtttacaacttatcaccttgacactacccgtattgacttcaacctaggaactcatagacctgagatctcatctcacttcccctca 13786  T
Q  718 atcaatcacaacc 730  Q
    |||||||||||||    
T  13787 atcaatcacaacc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 76; Significance: 9e-35; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 40326 - 40507
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| ||||||||| ||||||| ||||||||| ||| |||||||||| | | ||||| |||||| |||||||||||||||| | ||| |||| ||||||    
T  40326 ttgttgacccagttcagtgacaa-cacacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaac 40424  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||||| | || || ||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  40425 tcctcgtttaca-ctttatgacctaggacctaccagtatagaattcaacctaggaactcctagatctgagatcccatctcacta 40507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 375 - 528
Target Start/End: Complemental strand, 3808 - 3652
Alignment:
Q  375 tgaaactctggcatgttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaac 474  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||   | |||||||||||||||||||  ||||||||||||| |  |||||||    
T  3808 tgaaattctggcatgttagctttcagatgttctacatgatgttccaacactggatacaaaatacaaatgttgaacctaatgtttagaacattatgctaac 3709  T
Q  475 agaaataaataa---aatgcaaacgtaaaagataagaaagtaaaatgcacaggagga 528  Q
    ||||||||| ||   ||||||||||||||| | |||||||||||||||  |||||||    
T  3708 agaaataaacaaaacaatgcaaacgtaaaatacaagaaagtaaaatgcgtaggagga 3652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 71; Significance: 9e-32; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 375 - 528
Target Start/End: Original strand, 4310 - 4466
Alignment:
Q  375 tgaaactctggcatgttagctttcagatgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaac 474  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||   | |||||||||||||||||||  ||||||||||||| |  ||||||     
T  4310 tgaaattctggcatgttagctttcagatgttctacatgatgttccaacactggatacaaaatacaaatgttgaacctaatgtttagaacattatgctaaa 4409  T
Q  475 agaaataaataa---aatgcaaacgtaaaagataagaaagtaaaatgcacaggagga 528  Q
    ||||||||| ||   ||||||||||||||| | |||||||||||||||  |||||||    
T  4410 agaaataaacaaaacaatgcaaacgtaaaatacaagaaagtaaaatgcgtaggagga 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 505 - 707
Target Start/End: Original strand, 37333 - 37536
Alignment:
Q  505 aagaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtc 604  Q
    |||||||||||  ||| |||||  |||||||||||||||||||||| ||||||| ||  || ||||||||||  || ||||| |||||| ||||||||||    
T  37333 aagaaagtaaagggcataggagagttgttaacccagttcggtgacagacacacccactatg-gggctaccaagtcaggaaggaaatccactagtgtagtc 37431  T
Q  605 cttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattga-attcaacctaggaactcctagatctaagatccca 702  Q
    |||||| | |||||||| |||||||||   |||| ||||  |||||||||||||||| || | ||  |||||||||||||||||||||| | ||||||||    
T  37432 cttattctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgtctagactttcaacctaggaactcctagatatgagatccca 37531  T
Q  703 tctca 707  Q
    |||||    
T  37532 tctca 37536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 26395 - 26576
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||| |||||||||||||||||||||  || |||||||||| | | ||||| |||||| |||||||||||||||| |  || ||||  |||||    
T  26395 ttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagctctcaacaaac 26494  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| | ||  |||||||||||||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  26495 tcctcatttaca-ctaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgacatcccatctcacta 26576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 18295 - 18114
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcggg-ctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||| |||| || ||||||||| |||||| |||||||||||||||| || || |||| |||||    
T  18295 ttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaa 18196  T
Q  627 ctccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||  | |||  |||  ||| |||||||||||| |||| || |||||||||||||||||||||||| |||||||||| |||||    
T  18195 ctcctcgatta-cactaaaga-ctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatcacacta 18114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 27689 - 27508
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcggg-ctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||| |||| || ||||||||| |||||| |||||||||||||||| || || |||| |||||    
T  27689 ttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaa 27590  T
Q  627 ctccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||  | |||  |||  ||| |||||||||||| |||| || |||||||||||||||||||||||| |||||||||| |||||    
T  27589 ctcctcgatta-cactaaaga-ctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatcacacta 27508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 7708 - 7527
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||| ||||||||||||||||||| ||| ||  |||||||||| ||| ||||| ||| || |||||||||||||||| || || ||||  |||||    
T  7708 ttgttgacctagttcggtgacaaacacacttactctaggggctaccaagccaggaaggaaattcactagtgtagtccttattctatagctctcaacaaac 7609  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| | ||  ||||||||||||||||  ||| || |||||||||||||||||||||||| ||||||||||||||||    
T  7608 tcctcatttaca-ctaaagacctaggacctacccatatagacttcaacctaggaactcctagatctgagatcccatctcacta 7527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 61641 - 61460
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||||||||||||||||  ||| ||| |||||||||| ||||||||| |||||| ||||||||| ||||||  | || |||| ||||||    
T  61641 ttgttgacccagttcggtgacaaacacat-tactctgggggctaccaagccaagaaggaaatccactagtgtagttcttattcaatagctctcagcaaac 61543  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||   ||||| | || || |||||| |||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||    
T  61542 tcattgtttaca-ctatatgacctaagacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcacta 61460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 529 - 610
Target Start/End: Complemental strand, 50260 - 50179
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||| ||||||||||||||||||||||||||| ||  ||||||||||  || ||||| |||||| ||||||||||||||||    
T  50260 ttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttatt 50179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 710
Target Start/End: Complemental strand, 48371 - 48331
Alignment:
Q  670 ttcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  48371 ttcaacctaggaactcctagatctaagatctcatctcacta 48331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 506 - 710
Target Start/End: Original strand, 202363 - 202566
Alignment:
Q  506 agaaagtaaaatgcacaggaggattgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtcc 605  Q
    ||||||||||  ||||| |||  |||||||||||||||| |||||||||||  ||| ||| ||||||||||  || ||||| |||||| |||||||||||    
T  202363 agaaagtaaatagcacaagagagttgttaacccagttcgttgacaaacacaagtactctgggggctaccaagtcaggaaggaaatccactagtgtagtcc 202462  T
Q  606 ttattat-aagttctcggcaaactccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatc 704  Q
    ||||| | |||||||| | |||   ||  |||| ||||  ||||||||||||||||  | | || ||||||||||||||| |||||||| ||||||||||    
T  202463 ttattctaaagttctcagtaaa--tcacatttacaacttaagacctaggacctacccatctggacttcaacctaggaacttctagatctgagatcccatc 202560  T
Q  705 tcacta 710  Q
    ||||||    
T  202561 tcacta 202566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 535 - 710
Target Start/End: Complemental strand, 25836 - 25660
Alignment:
Q  535 acccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaag 633  Q
    ||||||||||||||||||||||||||| ||| | |||||||| ||| ||||| |||||| | ||||||||||||||  | || ||||  ||||||||  |    
T  25836 acccagttcggtgacaaacacacctactctgggagctaccaagccaggaaggaaatccactggtgtagtccttattcaatagctctcaacaaactcctcg 25737  T
Q  634 tttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||| | ||  | ||||||||||||||| |||| || ||||||||| |||||||||||||| ||||||||||||||||    
T  25736 tttaca-ctagatgacctaggacctacccgtatagacttcaacctacgaactcctagatctgagatcccatctcacta 25660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 16793 - 16611
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||| || |||||||||||||||||||||||| | | |||||||||| |||  |||| |||||| || ||||||||||||| | ||| | |  ||||||    
T  16793 ttgttgactcagttcggtgacaaacacacctactccgggggctaccaagccagaaaggaaatccactactgtagtccttattcaaaagctataagcaaac 16694  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||   |||| | || || ||||||||||||||| |||| || ||||||||||||||||||| |||||||||||||||||||||    
T  16693 tcctcatttaca-ctttatgacctaggacctacccgtatagacttcaacctaggaactcctatatctaagatcccatctcacta 16611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 634 - 727
Target Start/End: Original strand, 11284 - 11376
Alignment:
Q  634 tttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcactaccactcaatcaatcaca 727  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||| || | ||||||||||||    
T  11284 tttacaactctagacctaggacctaccggtattgacttcaacctaggtactcctagatctgagatcccatctcacttcc-cacaatcaatcaca 11376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 529 - 709
Target Start/End: Complemental strand, 53092 - 52915
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||||||| |||   ||||||| ||| |||||||||| ||| || || |||||| |||||||||||||||| || || |||| ||||||    
T  53092 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctatagctctcagcaaac 52995  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  ||||| | ||  |||||||||||||||| || |||  |||||||||||||||||||||||| |||||||||||||||    
T  52994 tcctcgtttaca-ctaaagacctaggacctacccgt-ttggtttcaacctaggaactcctagatctgagatcccatctcact 52915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 645 - 705
Target Start/End: Complemental strand, 45918 - 45858
Alignment:
Q  645 agacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatct 705  Q
    |||||||||||||||| ||||||| ||||||||| |||||||| ||||| |||||||||||    
T  45918 agacctaggacctacccgtattgacttcaacctaagaactccttgatctgagatcccatct 45858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 537 - 710
Target Start/End: Complemental strand, 110418 - 110243
Alignment:
Q  537 ccagttcggtgacaaa-cacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagt 634  Q
    |||||||||||||||| ||||| ||| ||  ||||||||||  || ||||| |||||| ||||||||||||||||  | || |||| |||||||||  ||    
T  110418 ccagttcggtgacaaaacacacatactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgt 110319  T
Q  635 ttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||| | || || ||||||||||||||| |||| || |||||||||||||||||||||| | ||||||||||||||||    
T  110318 ttaca-ctatatgacctaggacctacccgtatagacttcaacctaggaactcctagatttgagatcccatctcacta 110243  T

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Target: scaffold0259 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 529 - 710
Target Start/End: Complemental strand, 17446 - 17265
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||||||  ||||||||||||||||| ||| ||||||||||  || ||||  |||||| |||||||||||||||| || || |||| |||||     
T  17446 ttgttgacccagtttcgtgacaaacacacctactctgggggctaccaagtcaggaagaaaatccactagtgtagtccttattctatagctctcagcaaat 17347  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    |||  ||| | | ||  |||||||||||||||| |||| || |||||||||| ||||| ||||||| ||||| ||||||||||    
T  17346 tcctcgttaaca-ctaaagacctaggacctacccgtatagacttcaacctagaaactcttagatctgagatctcatctcacta 17265  T

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Target: scaffold0185 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 529 - 704
Target Start/End: Complemental strand, 2527 - 2351
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||| ||||| ||||||||||| |||||||||  |  |||||| ||| ||| ||||| | |||||||||||||||||||||  | || |||| ||||||    
T  2527 ttgttgacccatttcggtgacaagcacacctactttaggggctatcaagccaggaaggaagtccaatagtgtagtccttattcaatagctctcagcaaac 2428  T
Q  628 tccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatc 704  Q
    |||  ||||| | || || ||||||||||||| | |||| || |||||||||||||||||||||||| ||||||||||    
T  2427 tccccgtttaca-ctatatgacctaggacctagccgtatagacttcaacctaggaactcctagatctgagatcccatc 2351  T

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Target: scaffold0006 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 529 - 710
Target Start/End: Original strand, 87726 - 87908
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacac-tgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaa 626  Q
    ||||| |||||||||||||||||||||||||||   || ||||| |||| | | ||||| |||||| ||||||||||||||||  | || |||| |||||    
T  87726 ttgttgacccagttcggtgacaaacacacctacgtatgggggct-ccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaa 87824  T
Q  627 ctccaagtttagaactcta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||  ||||| | || || ||||||||||||||| || | || ||||||| |||||||||||||||| ||||||||||||||||    
T  87825 ctcctcgtttaca-ctatatgacctaggacctacccgtctagacttcaacccaggaactcctagatctgagatcccatctcacta 87908  T

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Target: scaffold0054 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 412 - 490
Target Start/End: Original strand, 74580 - 74658
Alignment:
Q  412 gatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaacagaaataaataaaatg 490  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||| || |||||||| | ||||||||||||    
T  74580 gatgttccaacaccatacacaaattacgaatgttgaatgtaatgtttagaacatcatgctaacaaatataaataaaatg 74658  T

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Target: scaffold0022 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 3114 - 3291
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||| ||||||||||||||| ||||||||| |||  ||||||||| ||| ||||| |||||| ||||||||| | ||||  | || |||| ||||||    
T  3114 ttgttaatccagttcggtgacaa-cacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtacgtattcaacagctctcagcaaac 3212  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
      || |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||||||||| | |||||||||||||||    
T  3213 --cacgttt-gcactaatgacctaggacctacccgtactgatttcaacctaggaactcctagatttgagatcccatctcact 3291  T

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Target: scaffold0143 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 36289 - 36467
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaac 627  Q
    ||||||| ||||||||||| |||   ||||||| ||| |||||||||| ||| ||||  |||||| |||||||||||||||| | ||| |||| ||||||    
T  36289 ttgttaatccagttcggtg-caacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaaaagctctcagcaaac 36387  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    | |  |||| | |||   ||||||||||||||| ||| ||| |||||||||||||||||||||||| ||| |||||||||||    
T  36388 ttctcgttt-gcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgaga-cccatctcact 36467  T

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Target: scaffold0032 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 709
Target Start/End: Original strand, 103097 - 103276
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaac 627  Q
    ||||||||||||||| ||| |||   ||||||| ||  |||||||||| ||| ||||| |||||| ||||||||||||||||  | || |||  ||||||    
T  103097 ttgttaacccagttcagtg-caacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctgagcaaac 103195  T
Q  628 tccaagtttagaactctagacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    |||  |||| | ||   |||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||||| |||||||    
T  103196 tccttgttt-gcaccaaagacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccttctcact 103276  T

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Target: scaffold0088 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 710
Target Start/End: Original strand, 36598 - 36765
Alignment:
Q  544 ggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttattata-agttctcggcaaactccaagtttagaact 642  Q
    |||||||||||||||||| |||  ||||||||| | | ||||| |||||| ||||||||||||||||  | || ||||  ||||||||  ||||| | ||    
T  36598 ggtgacaaacacacctactctggaggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttaca-ct 36696  T
Q  643 cta-gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
     || ||||||||||||||||||||  | ||||| ||||||||||| |||||| ||||||||| ||||||    
T  36697 atatgacctaggacctacctgtatatacttcaaactaggaactcccagatctgagatcccatttcacta 36765  T

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Target: scaffold0338 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 567 - 709
Target Start/End: Complemental strand, 16344 - 16201
Alignment:
Q  567 gggctaccaaaccaagaaggtaatccaatagtgtagtccttatt-ataagttctcggcaaactccaagtttagaactcta-gacctaggacctacctgta 664  Q
    |||||||||| ||| ||||| |||||| |||||||||||||||| | ||| ||||  ||||||||   |||| | || || ||||||||||||||| ||     
T  16344 gggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcaacaaactcctcatttaca-ctttatgacctaggacctacccgtc 16246  T
Q  665 ttgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    | || |||||||||||||||||||||||| ||||| |||||||||    
T  16245 tagacttcaacctaggaactcctagatctgagatctcatctcact 16201  T

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Target: scaffold0213 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 2798 - 2872
Alignment:
Q  401 atgttctatgtgatgttccaacaccaaacacaaaatacaaatgttgaatgtaatgtttagaacgtcgtgctaaca 475  Q
    |||||||||| ||||||||||||||||| ||| | |||  ||||||||||||||||||||||| | |||||||||    
T  2798 atgttctatgcgatgttccaacaccaaaaacagattacggatgttgaatgtaatgtttagaacattgtgctaaca 2872  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 709
Target Start/End: Complemental strand, 17023 - 16960
Alignment:
Q  646 gacctaggacctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcact 709  Q
    ||||||| ||| ||| ||| ||| |||||||||||||||||||||||| |||||||||||||||    
T  17023 gacctagtacccacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 16960  T

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Target: scaffold0020 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 654 - 710
Target Start/End: Complemental strand, 12553 - 12497
Alignment:
Q  654 acctacctgtattgaattcaacctaggaactcctagatctaagatcccatctcacta 710  Q
    ||||||| |||| || |||||||||| ||||||||||||| ||||||||||||||||    
T  12553 acctacccgtatagacttcaacctagaaactcctagatctgagatcccatctcacta 12497  T

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Target: scaffold0333 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 610
Target Start/End: Original strand, 5637 - 5717
Alignment:
Q  529 ttgttaacccagttcggtgacaaacacacctacactgcgggctaccaaaccaagaaggtaatccaatagtgtagtccttatt 610  Q
    ||||| ||||||||||||| ||||||||||||| ||  |||||||||| | | ||||| ||||||  |||||||||||||||    
T  5637 ttgttgacccagttcggtgtcaaacacacctactct-agggctaccaagcaaggaaggaaatccacaagtgtagtccttatt 5717  T

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