View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3116_low_1 (Length: 1103)
Name: NF3116_low_1
Description: NF3116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3116_low_1 |
 | |
|
| [»] scaffold0127 (1 HSPs) |
| | |
|
| [»] scaffold0620 (2 HSPs) |
| | |
|
| [»] scaffold1613 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 868; Significance: 0; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 868; E-Value: 0
Query Start/End: Original strand, 26 - 1080
Target Start/End: Complemental strand, 31424857 - 31423810
Alignment:
| Q |
26 |
atcattgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31424857 |
atcattgtattgatatatgaataaaaatatagacagatgcacaaattgtacaaaacattatttcagtattaaatacgagtaaaaatatagacatgtgtat |
31424758 |
T |
|
| Q |
126 |
nnnnnnnttgatccccacattaaattannnnnnnngaaacggcagaatattttaaaaacttgatccctgttcaagacgaacagagaccaatatcagaggt |
225 |
Q |
| |
|
|||||||||||||||| || |||||| || ||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
31424757 |
aaaaaaattgatccccacattaattttatttttttgaaacgacaaaatatattaaaaacttgatccctgttcaagacgaacaaagaccagtatcagaggt |
31424658 |
T |
|
| Q |
226 |
tacatgataaaggcgtcgtatataggtggaacacccaaatgaaacaccataaaatacacaaaacaatcatcacctaaccaagatctactttcaacaccca |
325 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31424657 |
tacatgataaagacgtcgtatataggcggaacatccaaattaaacaccataaaatacacaaaacaatcatcacctaaccaagatctactttcaacaccca |
31424558 |
T |
|
| Q |
326 |
aaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattgaacacgaaatccatacaccacccttcgctcgctac |
425 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31424557 |
aaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatcataaacagccattgaacacgaaatccatacaccccccttcgctcgctac |
31424458 |
T |
|
| Q |
426 |
tcaccccaaaaaacacccctctaaatcaaacaacaccttatcttcaccttagttgagccacatccaaaaatgtcatattccaacccttagtcggcctcca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
31424457 |
tcaccccaaaaaacacccctctaaatcaaccaacaccttatcatcaccttagttgagccacatccaaaaatgtcctattccaacgcttagtcggcctcca |
31424358 |
T |
|
| Q |
526 |
cctctctactcctgatccgccgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagcgactgg |
625 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
31424357 |
cctctctactcctgatccaccgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagcgaccgg |
31424258 |
T |
|
| Q |
626 |
cctaccagactctgaaaacaaatcagtaaggcacctctcacccccgatcaaccggagaagacacgaagactagccaacatcagaaaaggaaaaggctcaa |
725 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31424257 |
cctaccagactctgaaaacaaatcagtaaggcacccctcacccccgatcaaccggagaagacacgaagactagccaacatcagaaaaggaaaaggctcaa |
31424158 |
T |
|
| Q |
726 |
ctcaaaaccacccagactcaagcacccatacacaaaacaaccaaaaggcaccaagagctagcgacgacggatacagacccaagacaaaggcagcctacaa |
825 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
31424157 |
ctcaaaaccacccagactcaagcacccatacacaaaacaaccaaaaggcaccaagagctagcgacgatggatacagacccaagacaaaggcagcctacaa |
31424058 |
T |
|
| Q |
826 |
cagaaacaccaagagtacactaccatccaccaaaacaccaaaaaacatccacctccctacctaaacaacatcaaccacccccacttaatcagctcttgtc |
925 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31424057 |
cagaaacaccaagagtacactaccatccacca-------aaaaaacatccacctccctacctaaacaacatcaaccacccccacttaatcagctcttgtc |
31423965 |
T |
|
| Q |
926 |
tatcaatcgtatcaatgccaaatcggagtcaaaattatccacgaccaccccatccgaacgctacaaaccatcacacacaactacacaaacctacgcaacc |
1025 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
31423964 |
tatcaatcgtatcaatgccaaatcggagtccaaattatccacaatcaccccatccgaacgctacaaaccatcacacaccactacacaaacctacacaacc |
31423865 |
T |
|
| Q |
1026 |
atctcgctccaccgctaacagtaccacaccaaacaaccacacaaaaccaacgtga |
1080 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31423864 |
atctcgctccactgctaacagtaccacaccaaacaaccacacaaaaccaacgtga |
31423810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 704 - 920
Target Start/End: Complemental strand, 24712462 - 24712244
Alignment:
| Q |
704 |
atcagaaaaggaaaaggctcaactc-aaaaccacccagactcaagcacccatacacaaaa-caaccaaaaggcaccaagagctagcgacgacggatacag |
801 |
Q |
| |
|
|||||| |||||||||||||| ||| |||||||||| ||||||||| ||| |||||||| |||| ||||| ||||||||||||||||||||||||| | |
|
|
| T |
24712462 |
atcagagaaggaaaaggctcagctcgaaaaccacccgcactcaagcaaccaaacacaaaatcaactaaaag-caccaagagctagcgacgacggatatgg |
24712364 |
T |
|
| Q |
802 |
acccaaga-caaaggcagcctacaacagaaacaccaagagtacactaccatccaccaaaacaccaa-aaaacatccacctccctacctaaacaacatcaa |
899 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||| |||||||| |||| | |||||||| |||||||||||||||||||||||| ||| || | |
|
|
| T |
24712363 |
acccaaaaacaaaggcagcctacaacagaaacaccaagagctcactaccacccacaacaacaccaataaaacatccacctccctacctaaaaaacgtcta |
24712264 |
T |
|
| Q |
900 |
ccacccccacttaatcagctc |
920 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
24712263 |
cca-ccccacttaatcagctc |
24712244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 339 - 702
Target Start/End: Complemental strand, 24712951 - 24712584
Alignment:
| Q |
339 |
caccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattgaacacgaaatccatacaccacccttcgctcgctactcaccccaaaaaa |
438 |
Q |
| |
|
|||| |||||||||| |||||||||| ||||||||||| | ||| || |||| |||||||||||| ||| | |||||||||| |||||| ||||||| |
|
|
| T |
24712951 |
cacctaaaccaactttaccacctaaaacaaactccatcgcgaacgatcactgaaaacgaaatccatagacctca-ttcgctcgctgctcaccacaaaaaa |
24712853 |
T |
|
| Q |
439 |
ca----cccctctaaatcaaacaacaccttatcttcaccttagttgagccacatccaaaaatgtcatattccaacccttagtcggcctc---cacctctc |
531 |
Q |
| |
|
| || ||||||||||||| || || | ||||||| | ||||||||| || |||||| |||||||||| ||||||||||||| |||| ||| |
|
|
| T |
24712852 |
aaaaaacctctctaaatcaaaccaccttttcccatcacctttgctgagccacacccgaaaatgacatattccaatgcttagtcggcctccaccaccgctc |
24712753 |
T |
|
| Q |
532 |
tactcctgatccgccgaagaaaaaacaccaaatttagcccaaagga-gacttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctac |
630 |
Q |
| |
|
||| |||||||| |||||| ||||||||| || ||||||||||| | ||||||||||||||||||||| |||||||||||| |||| ||| |||| || |
|
|
| T |
24712752 |
tacccctgatccaccgaag-aaaaacaccgaaattagcccaaagcacaacttgaatcaaagcactgact-ccgatctcgaataaaaaatgaccggcccac |
24712655 |
T |
|
| Q |
631 |
cagactctgaaaacaaatcagtaaggcacctctcacccccgatcaaccggagaagacacgaagactagccaa |
702 |
Q |
| |
|
|| |||| |||||||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||| |
|
|
| T |
24712654 |
catactccagaaacaaatcagtaaggcacccctca-ccccgatcaaccggagaagacaccatgaccagccaa |
24712584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 457
Target Start/End: Original strand, 823049 - 823325
Alignment:
| Q |
187 |
gatccctgttcaagacgaacagagaccaata--tcagaggttacatgataaaggcgtcgtatataggtggaacacccaaatgaaacaccataaaat-aca |
283 |
Q |
| |
|
|||| ||| |||||||||||||||||| | |||||| |||| | ||||||||||||||||| | ||||||||||||| ||||||||||||| ||| |
|
|
| T |
823049 |
gatcgctgctcaagacgaacagagaccggtgattcagagactacaagttaaaggcgtcgtatataaggggaacacccaaattaaacaccataaaaagaca |
823148 |
T |
|
| Q |
284 |
caaa-acaatcatcacctaaccaagatctactttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatcac-aaa |
381 |
Q |
| |
|
| ||| || | ||||| ||| |||| ||||||||||| || ||| || |||||||| |||||||||||||||| ||||||||||||| ||| |
|
|
| T |
823149 |
cccttacacacaacccctaatcaacccctaccttcaacacccatgaggacatcacccaccaaaattaacttcaccacctaaaacaaactccatcacaaaa |
823248 |
T |
|
| Q |
382 |
cagccattg-aacacgaaatccatacaccacccttcgctcgctactcaccccaaa--aaacacccctctaaatcaaaca |
457 |
Q |
| |
|
|| ||| || || |||| ||||||| |||||||||||| | |||||||||| ||| ||||||| |||||| ||||||| |
|
|
| T |
823249 |
caaccactgaaaaacgatatccata-accacccttcgc-ctctactcaccctaaaagaaacacctctctaattcaaaca |
823325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 25735410 - 25735498
Alignment:
| Q |
39 |
tatatgaataaaaatatagacagatgcacaaattgtacagaaca--ttatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
||||| |||||||||||||||| ||| |||||||||| | || | ||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
25735410 |
tatataaataaaaatatagacatatgtacaaattgtaaaaaaaaaattatttccatattaaatatgagtaaaaatatagacatgtgtat |
25735498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 579 - 621
Target Start/End: Complemental strand, 5556638 - 5556596
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5556638 |
acttgaaccaaagaactgactcccgatctcgaatcaaaagcga |
5556596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 17551025 - 17550968
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
17551025 |
acttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
17550968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 19176570 - 19176513
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
19176570 |
acttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
19176513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 24099354 - 24099421
Alignment:
| Q |
593 |
actgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacc |
660 |
Q |
| |
|
||||| ||||||| |||||||||||| || |||| |||||||||| |||||||||| ||||||||| |
|
|
| T |
24099354 |
actgattcccgatatcgaatcaaaagtgatcggcccaccagactctataaacaaatcattaaggcacc |
24099421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 579 - 618
Target Start/End: Complemental strand, 43012443 - 43012404
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaag |
618 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
43012443 |
acttgagtcaaagaactgactcccgatctcgaatcaaaag |
43012404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 420 - 457
Target Start/End: Original strand, 4637266 - 4637303
Alignment:
| Q |
420 |
cgctactcaccccaaaaaacacccctctaaatcaaaca |
457 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
4637266 |
cgctactcactccacaaaacacccctctaaatcaaaca |
4637303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 593 - 650
Target Start/End: Complemental strand, 30127316 - 30127259
Alignment:
| Q |
593 |
actgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatca |
650 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||||| |||||||||| |
|
|
| T |
30127316 |
actgactcccgatctcgaatcaaaagcgatcggctcaccagactcccgaaacaaatca |
30127259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 142; Significance: 6e-74; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 196 - 687
Target Start/End: Original strand, 17819435 - 17819925
Alignment:
| Q |
196 |
tcaagacgaacagagaccaatatcagaggttacatgataaagg-cgtcgtatataggtggaacacccaaatgaaacaccataaaatacacaaaacaatca |
294 |
Q |
| |
|
||||||||||||||||||| | ||| || |||||| | ||| | | ||||||||| | |||||||| ||| |||| |||||||| ||| | ||| | |
|
|
| T |
17819435 |
tcaagacgaacagagaccagtgtcatagattacataacaaaagacatcgtatataagcggaacacctaaaa-aaactccataaaagacatcatacaccaa |
17819533 |
T |
|
| Q |
295 |
tcacctaaccaagatctactttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattgaaca |
394 |
Q |
| |
|
|||||||||||| | |||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||| |||| | |
|
|
| T |
17819534 |
tcacctaaccaaaacctaccttcaacacccataagaaca-caaccaccaaaaccaacttcaccacctaaatcaaactccatcgcaaacaaccactgaaaa |
17819632 |
T |
|
| Q |
395 |
cgaaatccatacaccacccttcgctcgctactcaccccaaaaaacacccctctaaatcaaacaacaccttatcttcaccttagttgagccacatccaaaa |
494 |
Q |
| |
|
||||||||||| ||| ||||||||||||| |||||||||||||| || ||||||||||||||||| ||| || ||||||||| ||||||| | |||||| |
|
|
| T |
17819633 |
cgaaatccataaacc-cccttcgctcgctgctcaccccaaaaaaaactcctctaaatcaaacaacctcttctcgtcaccttagctgagccatacccaaaa |
17819731 |
T |
|
| Q |
495 |
atgtcatattccaacccttagtcggcc--tccacctctctactcctgatccgccgaagaaaaaacaccaaatttagcccaaag-gagacttgaatcaaag |
591 |
Q |
| |
|
||| |||||| ||| ||||||||||| || || |||| | || ||||| || |||||||| |||||| ||||||||||| | ||||||||||||| |
|
|
| T |
17819732 |
atgacatatttcaatgcttagtcggccatccccccgctctccccccgatccaccaaagaaaaa--accaaaattagcccaaagcaaaacttgaatcaaag |
17819829 |
T |
|
| Q |
592 |
cactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctcacccccgatcaaccggagaagac |
687 |
Q |
| |
|
|| |||| | ||||| |||||||| | | ||| ||||||||| |||||||||||||||||||| ||||||||| ||| |||||||||||| |
|
|
| T |
17819830 |
tacggactactgatcttaaatcaaaaacaatcagcccaccagactccataaacaaatcagtaaggcacccctcacccccaatctaccggagaagac |
17819925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 37044254 - 37044160
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
37044254 |
tgtattgatatatgaataaaaatatagatgtatgtacaaattgtacaaaaaattatttccgtattaaatatgagtaaaaatatagacatgtgtat |
37044160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 554 - 687
Target Start/End: Complemental strand, 3679539 - 3679406
Alignment:
| Q |
554 |
aaacaccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagta |
653 |
Q |
| |
|
|||||||| | ||| ||||||| | |||||||||||||||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||| |
|
|
| T |
3679539 |
aaacaccataattatcccaaagcaaacttgaatcaaagcaccgactcccgatctcgaatcaaaagtgataagccagttagactctagaaacaaatcagta |
3679440 |
T |
|
| Q |
654 |
aggcacctctcacccccgatcaaccggagaagac |
687 |
Q |
| |
|
| | ||| ||||||| |||||||||||||||||| |
|
|
| T |
3679439 |
aagtacccctcaccctcgatcaaccggagaagac |
3679406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 746 - 976
Target Start/End: Original strand, 31503540 - 31503772
Alignment:
| Q |
746 |
agcacccatacacaaaa-caaccaaaaggcaccaagagctagcgacgacggatacagacccaagacaaaggcagcctacaacagaaacaccaagagtaca |
844 |
Q |
| |
|
|||||||| | |||||| ||||||||| ||| ||||||||||||| | |||||| ||| ||| ||| |||| || |||| ||||||| | |||| || |
|
|
| T |
31503540 |
agcacccaaatacaaaagcaaccaaaatgcaacaagagctagcgatggcggatatggactcaaaacagaggcggcaaacaatagaaacatctagagctca |
31503639 |
T |
|
| Q |
845 |
ctaccatccaccaaaacacca-aaaaacatccacctccctacctaaacaacatcaaccacccccacttaatcagctcttgtctatcaatcgtatcaatgc |
943 |
Q |
| |
|
| ||||||||||||||||||| |||||||||||||| ||||||||| ||| || |||| |||| |||||||||||| ||| ||||| || || | |
|
|
| T |
31503640 |
ccaccatccaccaaaacaccataaaaacatccaccttcctacctaaccaatgtctaccatcccctgttaatcagctctcgtccatcaaatgtttcgactt |
31503739 |
T |
|
| Q |
944 |
caaatcggagtcaaaattatccacgaccacccc |
976 |
Q |
| |
|
|| ||| ||||| | |||||||||||||||||| |
|
|
| T |
31503740 |
cagatctgagtctagattatccacgaccacccc |
31503772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 819 - 916
Target Start/End: Complemental strand, 3679149 - 3679052
Alignment:
| Q |
819 |
cctacaacagaaacaccaagagtacactaccatccaccaaaacaccaaaaaacatccacctccctacctaaacaacatcaaccacccccacttaatca |
916 |
Q |
| |
|
||||||||||||||||||| || ||| |||| |||| |||||| || |||||| |||||||||||||||||||| || ||||||||| |||||||| |
|
|
| T |
3679149 |
cctacaacagaaacaccaatagctcaccaccacccacaaaaacatcattaaacattcacctccctacctaaacaacgtctaccaccccctcttaatca |
3679052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 293 - 382
Target Start/End: Original strand, 31503088 - 31503177
Alignment:
| Q |
293 |
catcacctaaccaagatctactttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaac |
382 |
Q |
| |
|
|||||| || |||||| |||| |||||||| || ||||||| || |||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
31503088 |
catcacatacccaagacctaccttcaacacgcatgagaacaagaaccaccaaaaccaacttcgccacctaaatcaaactccatcgcaaac |
31503177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 709 - 807
Target Start/End: Original strand, 17820059 - 17820158
Alignment:
| Q |
709 |
aaaaggaaaaggctcaactc-aaaaccacccagactcaagcacccatacacaaaa-caaccaaaaggcaccaagagctagcgacgacggatacagaccca |
806 |
Q |
| |
|
|||||||||||||| | ||| ||||||||||| |||||||| |||| |||||||| ||||||||| |||||||||| |||||||||| |||| |||||| |
|
|
| T |
17820059 |
aaaaggaaaaggctaagctcgaaaaccacccacactcaagctcccaaacacaaaatcaaccaaaa-gcaccaagagttagcgacgacagatatggaccca |
17820157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 579 - 684
Target Start/End: Original strand, 30236141 - 30236246
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctcacccccgatcaacc |
678 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||| | || |||||||| ||| |||||||| | |||||| || ||||||| || ||| |
|
|
| T |
30236141 |
acttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaagggcaccccttacccccggtccacc |
30236240 |
T |
|
| Q |
679 |
ggagaa |
684 |
Q |
| |
|
||||| |
|
|
| T |
30236241 |
agagaa |
30236246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 24995408 - 24995465
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
24995408 |
acttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
24995465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 31207375 - 31207432
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
31207375 |
acttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
31207432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 37986871 - 37986928
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
37986871 |
acttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagact |
37986928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 16863483 - 16863564
Alignment:
| Q |
34 |
attgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
16863483 |
attgatatatgaataaaaatatagacagatgtacaaaa----------aatatttcagtattaaatatgagtaaaaatatacacatgtgtat |
16863564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 579 - 618
Target Start/End: Original strand, 16457474 - 16457513
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaag |
618 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
16457474 |
acttgagtcaaagaactgactcccgatctcgaatcaaaag |
16457513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 579 - 618
Target Start/End: Original strand, 32945716 - 32945755
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaag |
618 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
32945716 |
acttgaatcaaagaattgactcccgatctcgaatcaaaag |
32945755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 5221506 - 5221576
Alignment:
| Q |
236 |
aggcgtcgtatataggtggaacacccaaatgaaacaccataaaatac-acaaaacaatcatcacctaacca |
305 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||||| |||| || |||||||| || |||||||||| |
|
|
| T |
5221506 |
aggcgccgtatataggcggaacacccaaaagaaacaccaaaaaagacaacaaaacacacaccacctaacca |
5221576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 579 - 617
Target Start/End: Complemental strand, 9519567 - 9519529
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaa |
617 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
9519567 |
acttgagtcaaagaactgactcccgatctcgaatcaaaa |
9519529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 72800 - 72829
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagaca |
60 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
72800 |
tgtattgatatatgaataaaaatatagaca |
72829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 579 - 616
Target Start/End: Complemental strand, 15906754 - 15906717
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaa |
616 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
15906754 |
acttgaaccaaagaactgactcccgatctcgaatcaaa |
15906717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 636
Target Start/End: Original strand, 41893421 - 41893470
Alignment:
| Q |
587 |
caaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | ||||| |||||||| |
|
|
| T |
41893421 |
caaagaactgactcccgatctcgaatcaaaagtggttggcccaccagact |
41893470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 114; Significance: 3e-57; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 179 - 527
Target Start/End: Original strand, 48567241 - 48567591
Alignment:
| Q |
179 |
aaaaacttgatccctgttcaagacgaacagaga--ccaatatcagaggttacatgataaaggcgtcgtatataggtggaacacccaaatgaaacaccata |
276 |
Q |
| |
|
|||||||||||| ||| |||| ||||||||||| || ||||||| ||||| || || |||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
48567241 |
aaaaacttgatcactgctcaaaacgaacagagagaccggtatcagatattacagaatgaatgcgtcgtatataggcggaacacctaaaatcaacaccata |
48567340 |
T |
|
| Q |
277 |
aaatacacaaaacaatcatcacctaaccaagatctactttcaacacccaaa-agaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccat |
375 |
Q |
| |
|
||| ||| ||||| ||||||||||||||||||||| || |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
48567341 |
aaagacattaaacacccatcacctaaccaagatctacctt-aacacctaaagagaacaacaatcaccaaaaccaacttcaccacctaaatcaaacttcat |
48567439 |
T |
|
| Q |
376 |
ca-caaacagccattgaacacgaaatccatacaccacccttcgctcgctactcaccccaaaaaacacccctctaaatcaaacaacaccttatcttcacct |
474 |
Q |
| |
|
|| |||| || | |||| |||||||||||| ||| || |||||||||| |||||||||||||||| |||||||||||| ||||| ||| || |||||| |
|
|
| T |
48567440 |
cattaaacggcaactgaaaacgaaatccataaacc-cctttcgctcgctgctcaccccaaaaaacatccctctaaatcagacaacctcttctcatcacct |
48567538 |
T |
|
| Q |
475 |
tagttgagccacatccaaaaatgtcatattccaacccttagtcggcctccacc |
527 |
Q |
| |
|
| |||||| || ||||||||| ||||||||| ||||||| || |||||| |
|
|
| T |
48567539 |
aaactgagccgtattcaaaaatgttctattccaacgcttagtcagcttccacc |
48567591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 35028857 - 35028761
Alignment:
| Q |
30 |
ttgtattgatatatgaataaaaa-tatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
35028857 |
ttgtattgatatatgaataaaaaatatagacagatgcacaaactgtacaaaacattatttctgtattaaatacgagtaaaaatatagacatgtgtat |
35028761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 45538395 - 45538478
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatata |
114 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||| ||||| |||||| || |||||||| |||||||||| |||||||||||| |
|
|
| T |
45538395 |
tgtattgatatatgaataaaaatacagacatatgtacaaactgtacaaaaaattatttccgtattaaatatgagtaaaaatata |
45538478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 579 - 702
Target Start/End: Original strand, 6599958 - 6600081
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctcacccccgatcaacc |
678 |
Q |
| |
|
||||||||||||| || ||||||||||||| |||||||||||| |||| |||||||||| | ||||||||||||| | ||||| | ||||| ||| |
|
|
| T |
6599958 |
acttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagactctagagccaaatcagtaaggtcctcctcacgctcgatccacc |
6600057 |
T |
|
| Q |
679 |
ggagaagacacgaagactagccaa |
702 |
Q |
| |
|
| ||||||||| | ||||||||| |
|
|
| T |
6600058 |
gaagaagacaccataactagccaa |
6600081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 300 - 487
Target Start/End: Original strand, 23440152 - 23440344
Alignment:
| Q |
300 |
taaccaagatctactttcaacacccaaaagaacaacaatcaccaaaacca-acttcaccacctaaatcaaactccatca-caaacagccattgaa--cac |
395 |
Q |
| |
|
||||||||| ||| |||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||||| |||| ||| |||| || |
|
|
| T |
23440152 |
taaccaagacttaccttcaacacccaaaaaaacaacaactactaaaaccccacttcaccacctaaatcaaactccatcataaaacgaccactgaaacaac |
23440251 |
T |
|
| Q |
396 |
gaaatccatacaccaccctt--cgctcgctactcaccccaaaaaacacccctctaaatcaaacaacaccttatcttcaccttagttgagccaca |
487 |
Q |
| |
|
|||||||||| ||| | ||| | |||||| ||||||| ||| |||| ||||||||||||| ||| |||| || ||||||||| |||| |||| |
|
|
| T |
23440252 |
gaaatccataaacc-ctcttccctctcgctgctcacccaaaattacactcctctaaatcaaataaccccttctcatcaccttagctgaggcaca |
23440344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 593 - 663
Target Start/End: Original strand, 39041301 - 39041371
Alignment:
| Q |
593 |
actgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctct |
663 |
Q |
| |
|
||||||||| |||||||||||||||| || |||| ||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
39041301 |
actgactcctgatctcgaatcaaaagtgatcggcccaccagactctgtaaacaaatcattaaggcatctct |
39041371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 46698798 - 46698855
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||| | |||| |||||||| |
|
|
| T |
46698798 |
acttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagact |
46698855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 583 - 621
Target Start/End: Complemental strand, 35800553 - 35800515
Alignment:
| Q |
583 |
gaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
35800553 |
gaatcaaagaactgacttccgatctcgaatcaaaagcga |
35800515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 579 - 665
Target Start/End: Original strand, 36962629 - 36962714
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctca |
665 |
Q |
| |
|
|||||| |||||| ||||||||| |||||||||||||||| | |||| ||||||||| ||| ||||||||||||| ||| |||| |
|
|
| T |
36962629 |
acttgagtcaaag-actgactcctgatctcgaatcaaaagtaatcggcccaccagactccaaaaccaaatcagtaaggtacccctca |
36962714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 24572071 - 24572100
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagaca |
60 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
24572071 |
tgtattgatatatgaataaaaatatagaca |
24572100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 35765447 - 35765476
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagaca |
60 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
35765447 |
tgtattgatatatgaataaaaatatagaca |
35765476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 636
Target Start/End: Original strand, 53823442 - 53823491
Alignment:
| Q |
587 |
caaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || ||| | |||||||| |
|
|
| T |
53823442 |
caaagaactgactcccgatctcgaatcaaaagtgattggtccaccagact |
53823491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 113; Significance: 1e-56; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 243 - 619
Target Start/End: Original strand, 9613087 - 9613466
Alignment:
| Q |
243 |
gtatataggtggaacacccaaatgaaacaccataaaatacacaaaacaatcatcacctaaccaagatctactttcaacacccaaaagaacaacaatcacc |
342 |
Q |
| |
|
||||||||| ||| ||| ||| ||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||| ||||||| | |||| |
|
|
| T |
9613087 |
gtatataggcggatgaccaaaaagaaacaccataaaatacacaaaacacccatcaactaaccaagacctaccttcaacacccaatagaacaatgaccacc |
9613186 |
T |
|
| Q |
343 |
aaaaccaacttcaccacctaaatcaaactccatcacaaacagcca-ttgaacacgaaatccatacaccacccttcgctcgctactcaccccaaaaaacac |
441 |
Q |
| |
|
||| ||||||||||||||||||||||||| |||| |||| |||| | ||| | ||||||||| ||| |||||||||||||||||||||||||||| || |
|
|
| T |
9613187 |
aaacccaacttcaccacctaaatcaaacttcatcgcaaattgccactggaaaatgaaatccat--accccccttcgctcgctactcaccccaaaaaatac |
9613284 |
T |
|
| Q |
442 |
ccctctaaat-caaacaacaccttatcttcaccttagttgagccacatccaaaaatgtcatattccaacccttagtcggcct---ccacctctctactcc |
537 |
Q |
| |
|
|| | ||||| ||||||| ||| || ||| | || |||||||||||||||||| | |||| |||| |||||||||||| |||||||| ||| | |
|
|
| T |
9613285 |
ccttataaataaaaacaaccacttctcatcatcataactgagccacatccaaaaatattttatttcaacgcttagtcggcctccaccacctctttacctc |
9613384 |
T |
|
| Q |
538 |
tgatccgccgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagc |
619 |
Q |
| |
|
|||| | |||||||||||||||| | ||| |||| | ||||||||||||| || ||||||||||||||||| |||||| |
|
|
| T |
9613385 |
aaatccactaaagaaaaaacaccaaaataagcgtaaagcatacttgaatcaaagtacagactcccgatctcgaataaaaagc |
9613466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 29850300 - 29850395
Alignment:
| Q |
30 |
ttgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29850300 |
ttgtattgatatatgaataaaaatatagacatatgcacaaattatacaaaacattatttctgtattaaatacgagtaaaaatatagacatgtgtat |
29850395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 180 - 527
Target Start/End: Original strand, 9081110 - 9081465
Alignment:
| Q |
180 |
aaaacttgatccctgttcaagacgaacagagaccaatatcagaggttacatgataaaggcgtcgtatataggtggaacacccaaatgaaacaccata--- |
276 |
Q |
| |
|
||||||||||||||| |||||| ||||| | ||||||||| ||| ||| | | ||||||||| |||||||| || ||| ||| |||||||||| |
|
|
| T |
9081110 |
aaaacttgatccctgctcaagatgaacatataccaatatccgagattataaaacaaaggcgtcctatataggctcaagacctaaaataaacaccatatat |
9081209 |
T |
|
| Q |
277 |
-aaatacacaaaacaatcatcacctaaccaagatctactttcaacacccaaaa-gaacaacaatcaccaaaacca-acttcaccacctaaatcaaactcc |
373 |
Q |
| |
|
||| |||||| ||| |||||| ||| |||||||||| |||||||||||| ||||||||| || ||||||| | || ||||||||||||||||| |
|
|
| T |
9081210 |
aaaagacacaatacacccatcacttaatcaagatctaccttcaacacccaagctgaacaacaagcatcaaaaccctaatttgccacctaaatcaaactct |
9081309 |
T |
|
| Q |
374 |
atcacaaacag-ccattg--aacacgaaatccatacaccacccttcgctcgctactcaccccaaaaaacacccctctaaatcaaacaacaccttatcttc |
470 |
Q |
| |
|
|||| ||| || ||| || || |||||||||||| ||| |||||| || | | || |||||||||| ||||||||||||| ||||||| || || || |
|
|
| T |
9081310 |
atcataaatagaccactgaaaaaacgaaatccataaacc-cccttcccttgttgctaaccccaaaaaccacccctctaaataaaacaacctattctcatc |
9081408 |
T |
|
| Q |
471 |
accttagttgagccacatccaaaaatgtcatattccaacccttagtcggcctccacc |
527 |
Q |
| |
|
|||||| |||||||||| | ||| |||| |||||||| ||||||| ||||||||| |
|
|
| T |
9081409 |
accttaattgagccacactcgaaagtgtcctattccaatacttagtcagcctccacc |
9081465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 9370818 - 9370914
Alignment:
| Q |
30 |
ttgtattgatatatgaataaaaatatagacagatgcacaaattgtac-agaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||||| | || || |||| |||||||||| |||||| |||||||||||||||| |
|
|
| T |
9370818 |
ttgtattgatatatgaataaaaatataaacagatatacaaattgtacaaaaaaatcatttatgtattaaatatgagtaaatatatagacatgtgtat |
9370914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 581 - 636
Target Start/End: Complemental strand, 46603458 - 46603403
Alignment:
| Q |
581 |
ttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||||| ||||| |||||||| |
|
|
| T |
46603458 |
ttgaaccaaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagact |
46603403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 19598704 - 19598647
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
19598704 |
acttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagact |
19598647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 22200334 - 22200277
Alignment:
| Q |
315 |
ttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactc |
372 |
Q |
| |
|
|||||||||||||||| | || | || |||||||||| |||||||||||||||||||| |
|
|
| T |
22200334 |
ttcaacacccaaaagacccaccaccatcaaaaccaacatcaccacctaaatcaaactc |
22200277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 22235246 - 22235189
Alignment:
| Q |
315 |
ttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactc |
372 |
Q |
| |
|
|||||||||||||||| | || | || |||||||||| |||||||||||||||||||| |
|
|
| T |
22235246 |
ttcaacacccaaaagacccaccaccatcaaaaccaacatcaccacctaaatcaaactc |
22235189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 31585773 - 31585830
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
31585773 |
acttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
31585830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 31860937 - 31860998
Alignment:
| Q |
25 |
gatcattgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattat |
86 |
Q |
| |
|
|||| ||||||||||| |||||||||| |||||||| ||| |||||||||||| || ||||| |
|
|
| T |
31860937 |
gatctttgtattgatacatgaataaaactatagacatatgtacaaattgtacaaaaaattat |
31860998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 636
Target Start/End: Original strand, 38544759 - 38544808
Alignment:
| Q |
587 |
caaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
38544759 |
caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact |
38544808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 41920520 - 41920463
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
41920520 |
acttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
41920463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 579 - 618
Target Start/End: Original strand, 5389434 - 5389473
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaag |
618 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
5389434 |
acttgagtcaaagaactgactcccgatctcgaatcaaaag |
5389473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 594 - 673
Target Start/End: Complemental strand, 24658982 - 24658903
Alignment:
| Q |
594 |
ctgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctcacccccgat |
673 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| |||||||| | || |||||||| | |||||| || |||||||| |
|
|
| T |
24658982 |
ctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcaccccttgcccccgat |
24658903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 579 - 649
Target Start/End: Original strand, 15840925 - 15840995
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatc |
649 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| || ||| |||||||||| ||||||||| |
|
|
| T |
15840925 |
acttgaatcaagaaactgactcccgatctcgaatcaaaagtgatcagcccaccagactctagaaacaaatc |
15840995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 5459229 - 5459172
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
5459229 |
acttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagact |
5459172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 17033654 - 17033597
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||||| ||||| |||||||||||||||||| ||||||| || |||| |||||||| |
|
|
| T |
17033654 |
acttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagact |
17033597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 69; Significance: 2e-30; HSPs: 17)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 234 - 377
Target Start/End: Complemental strand, 1946186 - 1946042
Alignment:
| Q |
234 |
aaaggcgtcgtatataggtggaacacccaaatgaaacaccataaaatacacaaaacaatcatcacctaaccaagatctactttcaacacccaaaagaaca |
333 |
Q |
| |
|
|||| ||| |||||||| ||||||| ||||| |||| | ||||||| |||||| ||||||||||||||||||| | |||| ||||||| |||| ||||| |
|
|
| T |
1946186 |
aaagacgttgtatatagatggaacatccaaaagaaatatcataaaagacacaatacaatcatcacctaaccaaaacctaccttcaacatccaagcgaaca |
1946087 |
T |
|
| Q |
334 |
acaatcaccaaaac-caacttcaccacctaaatcaaactccatca |
377 |
Q |
| |
|
|||| ||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
1946086 |
acaaccaccaaaactccacttcaccacctaaatcaaactccatca |
1946042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 254 - 372
Target Start/End: Original strand, 1945841 - 1945960
Alignment:
| Q |
254 |
gaacacccaaatgaaacaccataaaatacacaaaacaatcatcacctaaccaagatctactttcaacacccaaaagaacaacaatcaccaaaac-caact |
352 |
Q |
| |
|
||||||||||| |||| ||||||||| |||||| |||| |||||||||||||| | ||||||||||||| |||| ||||||||| ||||||||| | ||| |
|
|
| T |
1945841 |
gaacacccaaaagaaataccataaaagacacaatacaaccatcacctaaccaaaacctactttcaacactcaaacgaacaacaaccaccaaaactccact |
1945940 |
T |
|
| Q |
353 |
tcaccacctaaatcaaactc |
372 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
1945941 |
tcaccacctaaatcaaactc |
1945960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 268 - 509
Target Start/End: Original strand, 15817096 - 15817334
Alignment:
| Q |
268 |
aacaccataaaatacacaaa-acaatcatcacctaaccaagatctactttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatc |
366 |
Q |
| |
|
||||||||||||||||| || ||| ||| ||||||| ||| ||||||||||||||| |||||||||| || ||||| ||| |||||||||||||| |
|
|
| T |
15817096 |
aacaccataaaatacactaataca--cattacctaacgaagtcctactttcaacacccttgagaacaacaaccatcaaaagaaacatcaccacctaaatc |
15817193 |
T |
|
| Q |
367 |
aaactccatcacaaacagccattgaacacgaaatccatacaccacccttcgctcgctactcaccccaaaaaacacccctctaaatcaaacaacaccttat |
466 |
Q |
| |
|
||||||||| |||| |||| |||| | |||||||||| |||| || |||| ||||||||||||||| || |||||||| |||||||||| ||| | |
|
|
| T |
15817194 |
aaactccattgcaaatggccactgaaaaagaaatccata-accatccatcgcctgctactcaccccaaataa-acccctctgaatcaaacaatctctttt |
15817291 |
T |
|
| Q |
467 |
cttcaccttagttgagccacatccaaaaatgtcatattccaac |
509 |
Q |
| |
|
| ||||| ||||||| ||||||| ||||| ||||||| |||| |
|
|
| T |
15817292 |
catcaccatagttgaaccacatctgaaaatttcatatttcaac |
15817334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 36420488 - 36420425
Alignment:
| Q |
25 |
gatcattgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattattt |
88 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
36420488 |
gatctttgtattgatatatgaataaaaatatagacagatgcacaaattgtacaaaacattattt |
36420425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 579 - 637
Target Start/End: Complemental strand, 4471991 - 4471933
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactc |
637 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
4471991 |
acttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactc |
4471933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 39338878 - 39338935
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
39338878 |
acttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact |
39338935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 10498579 - 10498500
Alignment:
| Q |
46 |
ataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
||||||||||||||| ||| |||||||||||| || ||||||| ||||||||| |||||||||||||| | |||||| |
|
|
| T |
10498579 |
ataaaaatatagacatatgtacaaattgtacaaaaatttatttccatattaaatatgagtaaaaatatagagacgtgtat |
10498500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 595 - 702
Target Start/End: Complemental strand, 23650437 - 23650331
Alignment:
| Q |
595 |
tgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctcacccccgatcaaccggagaagacacgaaga |
694 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||||||| || ||||| ||||||| ||| |||| |||||||| ||| ||||||||| | | |
|
|
| T |
23650437 |
tgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaataagtaaggtacccctca-ccccgatccacctaagaagacaccataa |
23650339 |
T |
|
| Q |
695 |
ctagccaa |
702 |
Q |
| |
|
|||||||| |
|
|
| T |
23650338 |
ctagccaa |
23650331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 37598693 - 37598626
Alignment:
| Q |
33 |
tattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaata |
100 |
Q |
| |
|
||||| |||||||||||||||||||| | ||| |||||||||||| || |||||||| ||||||||| |
|
|
| T |
37598693 |
tattgttatatgaataaaaatatagataaatgtacaaattgtacaaaaaattatttctttattaaata |
37598626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 28863827 - 28863869
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagacagatgcacaaattg |
73 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
28863827 |
tgtattgatatatgaataaaaatatagacacatgtacaaattg |
28863869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 11199759 - 11199796
Alignment:
| Q |
339 |
caccaaaaccaacttcaccacctaaatcaaactccatc |
376 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11199759 |
caccaaaaccaacttcaccgcctaaatcaaactccatc |
11199796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 22885146 - 22885203
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
22885146 |
acttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
22885203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 31902427 - 31902484
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
31902427 |
acttgaaccagagaactgactcccgatctcgaattaaaagcgattggcccaccagact |
31902484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 523 - 689
Target Start/End: Original strand, 36276131 - 36276295
Alignment:
| Q |
523 |
ccacctctctactcctgatccgccgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagcgac |
622 |
Q |
| |
|
||||||||||||||| || || |||||||||| ||| |||| | |||||| | |||||| |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
36276131 |
ccacctctctactccagacccaccgaagaaaagacaataaatat--cccaaaacaaacttgagtcaaag-attgactcccgatctcgaatcaaaagcgaa |
36276227 |
T |
|
| Q |
623 |
tggcctaccagactctgaaaacaaatcagtaaggca-cctctcacccccgatcaaccggagaagacac |
689 |
Q |
| |
|
||| ||||||||| || |||||||| |||| | |||||||| ||| || ||| |||||||||| |
|
|
| T |
36276228 |
cagcccaccagactccataaccaaatcagcaaggtaccctctcacatccggtccaccagagaagacac |
36276295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 420 - 459
Target Start/End: Original strand, 30598963 - 30599002
Alignment:
| Q |
420 |
cgctactcaccccaaaaaacacccctctaaatcaaacaac |
459 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30598963 |
cgctactcataccaaaaaacacccctctaaatcaaacaac |
30599002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 582 - 636
Target Start/End: Original strand, 33788648 - 33788702
Alignment:
| Q |
582 |
tgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||| ||||| |||||||||| |||||||||||||||||| |||| |||||||| |
|
|
| T |
33788648 |
tgaaccaaagaactgactcccaatctcgaatcaaaagcgatcggcccaccagact |
33788702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 636
Target Start/End: Complemental strand, 16960042 - 16959993
Alignment:
| Q |
587 |
caaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
16960042 |
caaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagact |
16959993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 64; Significance: 2e-27; HSPs: 17)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 6446061 - 6446155
Alignment:
| Q |
30 |
ttgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
6446061 |
ttgtattgatatatgaataaaa-tatagacagatgaacaaattgtacaaaacattatttatgtataaaatacgagtaaaaatatagacatgtgtat |
6446155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 300 - 618
Target Start/End: Complemental strand, 32316713 - 32316397
Alignment:
| Q |
300 |
taaccaagatctactttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattgaacacgaaa |
399 |
Q |
| |
|
||||||||| |||| |||||||| || |||||||||||| |||||| | |||| || |||||| ||||||||||| | ||| ||| |||| |||||| |
|
|
| T |
32316713 |
taaccaagacctaccttcaacacacataagaacaacaattaccaaacctaactgcatcacctagatcaaactccacgagaaatgaccactgaaaacgaaa |
32316614 |
T |
|
| Q |
400 |
tccatacaccacccttcgctcgctactcaccccaaaaaacacccctctaaatcaaacaacaccttatcttcaccttagttgagccacatccaaaaatgtc |
499 |
Q |
| |
|
| |||| || |||| |||| | ||||||||||| ||| |||||||| ||||||||||| ||| || || | |||| ||| |||| |||||||||| |
|
|
| T |
32316613 |
ttcataaac-acccatcgcatgttactcaccccagaaa-cacccctcctaatcaaacaacctcttctcatctcaatagtcgagacaca--caaaaatgtc |
32316518 |
T |
|
| Q |
500 |
atattccaacccttagtcggcctccacc---tctctactcctgatccgccgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactg |
596 |
Q |
| |
|
||||||||| || | |||||||||||| ||| ||| || ||| ||||||||||| ||||| | ||||||||||| | ||||||||||||| ||| |
|
|
| T |
32316517 |
ttattccaacgctcattcggcctccaccacctctataccccctgtccaccgaagaaaaa-caccataattagcccaaagtaaacttgaatcaaagaactt |
32316419 |
T |
|
| Q |
597 |
actcccgatctcgaatcaaaag |
618 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
32316418 |
actaccgatctcgaatcaaaag |
32316397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 12996190 - 12996100
Alignment:
| Q |
34 |
attgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12996190 |
attgatatatgaataaaaatata-acagatgaacaaattgtaataaacattatttatgtattaaatacgagtaaaaatatagacatgtgtat |
12996100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 13025334 - 13025244
Alignment:
| Q |
34 |
attgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
13025334 |
attgatatatgaatgaaaatata-acagatgaacaaattgtacaaaacattatttatgtattaaatacgagtaaaattatagacatgtgtat |
13025244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 234 - 617
Target Start/End: Complemental strand, 5747015 - 5746627
Alignment:
| Q |
234 |
aaaggcgtcgtatataggtggaacacccaaatgaaacaccataaaatacacaaa--acaatcatcacctaaccaagatctactttcaacacccaaaagaa |
331 |
Q |
| |
|
|||||||||||||||||| |||||||| ||| |||| || ||| |||| || ||| ||||||||| | |||| |||| ||||||||||| | |
|
|
| T |
5747015 |
aaaggcgtcgtatataggcggaacacctaaaatgaacatcaataaagacacgaattacacacatcacctacctaagacctaccttcaacacccatgaacc |
5746916 |
T |
|
| Q |
332 |
caacaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattg-aacacgaaatccatacaccacccttcgctcgctactcac- |
429 |
Q |
| |
|
| |||| |||||||||||| |||||| |||||| || |||||||| |||||| ||| || || || ||||||||| | ||||| |||| |||||||||| |
|
|
| T |
5746915 |
ccacaaccaccaaaaccaatttcaccgcctaaaacatactccatcgcaaacaaccactgaaaaactaaatccata-agcacccatcgc-cgctactcact |
5746818 |
T |
|
| Q |
430 |
cccaaaaaacacccctctaaatcaaacaacaccttatcttcaccttagttgagccacatccaaaaatgtcatattccaac---ccttagtcggcctccac |
526 |
Q |
| |
|
|| |||||||||||||| |||||||||| | ||| | ||||| | || ||||||| |||||||| || ||||||||| |||| | | || |||| |
|
|
| T |
5746817 |
ccaaaaaaacacccctccaaatcaaacatcctcttcacctcaccatgattaagccacacccaaaaatttc-tattccaacactccttcgccttccaccac |
5746719 |
T |
|
| Q |
527 |
ctctctactcctgatccgccgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactgac--tcccgatctcgaatcaaaa |
617 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||| | ||| |||||| | ||||||||||||| | |||| | |||||||||||||||| |
|
|
| T |
5746718 |
ctctctacccctgatccaccgaagaaaaaacaccata-ataggccaaagcaaacttgaatcaaagaattgacaacctcgatctcgaatcaaaa |
5746627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 746 - 841
Target Start/End: Complemental strand, 5746519 - 5746424
Alignment:
| Q |
746 |
agcacccatacacaaaacaaccaaaaggcaccaagagctagcgacgacggatacagacccaagacaaaggcagcctacaacagaaacaccaagagt |
841 |
Q |
| |
|
|||||||| ||||||| ||||| ||| ||| |||||||||||||||||||||| || |||| |||||||| | ||||||||||||| |||||| |
|
|
| T |
5746519 |
agcacccaaacacaaagcaacccaaacgcaacaagagctagcgacgacggatatggatccaacacaaaggcgatcaacaacagaaacacaaagagt |
5746424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 21029952 - 21029892
Alignment:
| Q |
315 |
ttcaacacccaaaagaacaacaatcaccaaaa-ccaacttcaccacctaaatcaaactcca |
374 |
Q |
| |
|
|||||||||||||||||| || | |||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
21029952 |
ttcaacacccaaaagaaccaccaccaccaaaaaccaacttcaccagctaaatcaaactcca |
21029892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 34105467 - 34105400
Alignment:
| Q |
593 |
actgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacc |
660 |
Q |
| |
|
|||||||||||||||||||||||||| || |||| |||| ||||| |||||||||| ||||||||| |
|
|
| T |
34105467 |
actgactcccgatctcgaatcaaaagtgatcggcccaccaaactctagaaacaaatcactaaggcacc |
34105400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 579 - 621
Target Start/End: Original strand, 33968626 - 33968668
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
33968626 |
acttgaaccaaagaactgactcccgatctcgaatcaaaagcga |
33968668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 29064876 - 29064917
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagacagatgcacaaatt |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
29064876 |
tgtattgatatatgaataaaaatatagacatatgtacaaatt |
29064917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 29119730 - 29119771
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagacagatgcacaaatt |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
29119730 |
tgtattgatatatgaataaaaatatagacatatgtacaaatt |
29119771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 32935352 - 32935409
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| || ||| ||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
32935352 |
acttgagtccaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact |
32935409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 525 - 665
Target Start/End: Complemental strand, 34092917 - 34092777
Alignment:
| Q |
525 |
acctctctactcctgatccgccgaagaaaaaa--caccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagcgac |
622 |
Q |
| |
|
||||||||||||| | ||| |||||||||||| |||| |||| | |||||| | ||||||||||||| | |||| || ||||||||||||||| || |
|
|
| T |
34092917 |
acctctctactcccggtccaccgaagaaaaaaaacacctaattga--ccaaagcaaacttgaatcaaagaatagacttcctatctcgaatcaaaagtgat |
34092820 |
T |
|
| Q |
623 |
tggcctaccagactctgaaaacaaatcagtaaggcacctctca |
665 |
Q |
| |
|
||| ||||||||| || |||||||||||| | |||||||| |
|
|
| T |
34092819 |
cggctcaccagactccaaagacaaatcagtaatgtacctctca |
34092777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 582 - 621
Target Start/End: Complemental strand, 9224106 - 9224067
Alignment:
| Q |
582 |
tgaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9224106 |
tgaaccaaagaactgactcccgatctcgaatcaaaagcga |
9224067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 523 - 617
Target Start/End: Complemental strand, 15487782 - 15487690
Alignment:
| Q |
523 |
ccacctctctactcctgatccgccgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaa |
617 |
Q |
| |
|
||||||| |||| || |||| ||||||||||| ||||||| ||| ||||||| | |||||||||||| ||| ||||||||||||| ||| |||| |
|
|
| T |
15487782 |
ccacctccctaccccgtatccaccgaagaaaaa-caccaaaattaccccaaagcaaacttgaatcaaa-caccgactcccgatctcaaataaaaa |
15487690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 333 - 434
Target Start/End: Original strand, 4554320 - 4554420
Alignment:
| Q |
333 |
aacaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattgaacacgaaatccatacaccacccttcgctcgctactcacccc |
432 |
Q |
| |
|
||||||||||||| ||||||||| ||| ||| ||||||||||| ||||| ||| |||| || ||||||||| | || || ||| ||||||||||||| |
|
|
| T |
4554320 |
aacaatcaccaaacccaacttcatcactcaaaccaaactccatcgcaaacgaccactgaaaacaaaatccata-aacatccatcgtccgctactcacccc |
4554418 |
T |
|
| Q |
433 |
aa |
434 |
Q |
| |
|
|| |
|
|
| T |
4554419 |
aa |
4554420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 641 - 702
Target Start/End: Complemental strand, 15487682 - 15487622
Alignment:
| Q |
641 |
aaacaaatcagtaaggcacctctcacccccgatcaaccggagaagacacgaagactagccaa |
702 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||||||||| |||||||||| | ||| |||||| |
|
|
| T |
15487682 |
aaacaaatcaataaggtacctc-cacccccgatcaaccagagaagacaccatgaccagccaa |
15487622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 45; Significance: 4e-16; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 188 - 376
Target Start/End: Original strand, 26367632 - 26367823
Alignment:
| Q |
188 |
atccctgttcaagacgaacagagaccaata--tcagaggttacatgataaaggcgtcgtatataggtggaacacccaaatgaaacaccataaaataca-c |
284 |
Q |
| |
|
||||||| | |||||||||||||| || || ||| || ||||| |||||| || ||||||||| |||||||| ||| ||||||||| ||| ||| | |
|
|
| T |
26367632 |
atccctgcttaagacgaacagagatcagtaaatcaaagattacaaaataaagacgccgtatatagacggaacacctaaacaaaacaccattaaagacatc |
26367731 |
T |
|
| Q |
285 |
aaaacaatcatcacctaaccaagatctactttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatc |
376 |
Q |
| |
|
|| ||| |||||| |||| ||| || | ||||||||||| |||||||||| || |||| ||||||||||||||||| |||||||||||| |
|
|
| T |
26367732 |
aatacacacatcacttaactaagtcctgccttcaacacccatgagaacaacaaccatcaaatccaacttcaccacctaagtcaaactccatc |
26367823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 879 - 921
Target Start/End: Original strand, 25658554 - 25658596
Alignment:
| Q |
879 |
tccctacctaaacaacatcaaccacccccacttaatcagctct |
921 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
25658554 |
tccctacctaaataacatcaaccaccccctcttaatcagctct |
25658596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 588 - 636
Target Start/End: Complemental strand, 25992066 - 25992018
Alignment:
| Q |
588 |
aaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| ||||| |||||||| |
|
|
| T |
25992066 |
aaagaactgactctcgatctcgaatcaaaagcgattggcccaccagact |
25992018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 17182310 - 17182264
Alignment:
| Q |
177 |
ttaaaaacttgatccctgttcaagacgaacagagaccaatatcagag |
223 |
Q |
| |
|
|||||||| ||||||||| ||||| ||||||||||||| |||||||| |
|
|
| T |
17182310 |
ttaaaaacatgatccctgctcaaggcgaacagagaccagtatcagag |
17182264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 579 - 689
Target Start/End: Original strand, 25658166 - 25658276
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctcacccccgatcaacc |
678 |
Q |
| |
|
|||||||| |||| |||||||||| ||| ||||||||||||| |||| || ||| || | || |||||||| |||||||| ||||| | ||||| | | |
|
|
| T |
25658166 |
acttgaattaaagaactgactcccagtctagaatcaaaagcgatcggcccactagagtccgtaaccaaatcagcaaggcacccctcacactcgatccatc |
25658265 |
T |
|
| Q |
679 |
ggagaagacac |
689 |
Q |
| |
|
| ||||||||| |
|
|
| T |
25658266 |
gaagaagacac |
25658276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 586 - 636
Target Start/End: Complemental strand, 34378159 - 34378109
Alignment:
| Q |
586 |
tcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
34378159 |
tcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
34378109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 579 - 621
Target Start/End: Original strand, 39024463 - 39024505
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
||||||| ||||| | ||||||||||||||||||||||||||| |
|
|
| T |
39024463 |
acttgaaccaaagaagtgactcccgatctcgaatcaaaagcga |
39024505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 44272110 - 44272015
Alignment:
| Q |
30 |
ttgtattgatatatgaataaaaatatagacagatgcacaaattgtacagaacattatttcagtattaaatacaagtaaaaatatagacatgtgtat |
125 |
Q |
| |
|
|||||||||||||||||||| ||||||| || ||| ||||||| |||| || |||||||| | |||||||| |||| |||||||| | |||||||| |
|
|
| T |
44272110 |
ttgtattgatatatgaataacaatataggcaaatgtacaaattatacaaaaaattatttccgcattaaatataagtgaaaatataaatatgtgtat |
44272015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 293 - 435
Target Start/End: Original strand, 15126823 - 15126964
Alignment:
| Q |
293 |
catcacctaaccaagatctactttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattgaa |
392 |
Q |
| |
|
|||||||||||||| |||| |||| ||||| |||||||||| ||| |||| |||| ||||||||||||||||||||||| |||||||||| | || |
|
|
| T |
15126823 |
catcacctaaccaaaccctaccatcaatacccatgagaacaacaaccacaaaaaacaacatcaccacctaaatcaaactccattgcaaacagccactaaa |
15126922 |
T |
|
| Q |
393 |
cacgaaatccatacaccacccttcgctcgctactcaccccaaa |
435 |
Q |
| |
|
| |||||||||| |||| | ||| |||||||||||||||| |
|
|
| T |
15126923 |
aaagaaatccata-accattcatcgtccgctactcaccccaaa |
15126964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 2613623 - 2613682
Alignment:
| Q |
315 |
ttcaacacccaaaagaacaacaatcaccaaaaccaacttcaccacctaaatcaaactcca |
374 |
Q |
| |
|
|||||||||||||||| | || | ||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
2613623 |
ttcaacacccaaaagacccaccaccacaaaaatcaacttcaccacctaaatcaaactcca |
2613682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 579 - 621
Target Start/End: Original strand, 11379140 - 11379182
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11379140 |
acttgaaccaaagtactgactcccgatctcgaatcaaaagcga |
11379182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 579 - 621
Target Start/End: Complemental strand, 12480954 - 12480912
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12480954 |
acttgaaccaaagaactgactcccgatctcgaatcaaaagcga |
12480912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 874 - 920
Target Start/End: Original strand, 26386589 - 26386635
Alignment:
| Q |
874 |
ccacctccctacctaaacaacatcaaccacccccacttaatcagctc |
920 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
26386589 |
ccacctccttacctaaacaacatctaccaccccctcttaatcagctc |
26386635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 13311907 - 13311850
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
13311907 |
acttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact |
13311850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 523 - 634
Target Start/End: Original strand, 2613823 - 2613935
Alignment:
| Q |
523 |
ccacctctctactcctgatccgccgaagaaaaaacaccaaatttagcccaaag-gagacttgaatcaaagcactgactcccgatctcgaatcaaaagcga |
621 |
Q |
| |
|
|||||||||||| ||| ||| |||| |||||||||| | | | || |||||| | ||||||||||| ||||| ||| |||||||||||||||||| || |
|
|
| T |
2613823 |
ccacctctctacccctagtccaccgaggaaaaaacactataataagaccaaagcaaaacttgaatcaaggcactaacttccgatctcgaatcaaaagtga |
2613922 |
T |
|
| Q |
622 |
ctggcctaccaga |
634 |
Q |
| |
|
||||| |||||| |
|
|
| T |
2613923 |
ttggccaaccaga |
2613935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 594 - 670
Target Start/End: Complemental strand, 34390015 - 34389939
Alignment:
| Q |
594 |
ctgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacctctcaccccc |
670 |
Q |
| |
|
||||||||||||||||||||||||| || |||| |||||||| | ||| |||||||| | ||||| ||||||||| |
|
|
| T |
34390015 |
ctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcaccccc |
34389939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 1819780 - 1819873
Alignment:
| Q |
343 |
aaaaccaacttcaccacctaaatcaaactccatcacaaacagccattgaacacgaaatccatacaccacccttcgctcgctactcaccccaaaaaa |
438 |
Q |
| |
|
|||||||| ||||| ||||||| ||||||||| | |||||| |||||| | |||||||||||| | |||| |||| |||||||||| |||||||| |
|
|
| T |
1819780 |
aaaaccaatttcactacctaaaacaaactccaacgcaaacaaccattggaaacgaaatccata-aatacccatcgc-cgctactcactccaaaaaa |
1819873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 579 - 618
Target Start/End: Complemental strand, 10244250 - 10244211
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaag |
618 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
10244250 |
acttgagtcaaagaactgactcccgatctcgaatcaaaag |
10244211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 546 - 689
Target Start/End: Original strand, 43344861 - 43345003
Alignment:
| Q |
546 |
cgaagaaaaaacaccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaaca |
645 |
Q |
| |
|
|||||||||||||||| | | || |||||| | ||||| ||| ||| | ||||| | ||||| ||||||||||||| || | |||||||||| || | |
|
|
| T |
43344861 |
cgaagaaaaaacaccataat-agaccaaagtaaacttggatccaagaattgactttcaatctcaaatcaaaagcgaccggtccaccagactctataacga |
43344959 |
T |
|
| Q |
646 |
aatcagtaaggcacctctcacccccgatcaaccggagaagacac |
689 |
Q |
| |
|
||||| ||||| ||| |||| |||||||| |||| ||||||||| |
|
|
| T |
43344960 |
aatcaataaggtacccctcatccccgatccaccgaagaagacac |
43345003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 579 - 617
Target Start/End: Complemental strand, 37795057 - 37795019
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaa |
617 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
37795057 |
acttgactcaaagaactgactcccgatctcgaatcaaaa |
37795019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 5467639 - 5467668
Alignment:
| Q |
31 |
tgtattgatatatgaataaaaatatagaca |
60 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
5467639 |
tgtattgatatatgaataaaaatatagaca |
5467668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 587 - 636
Target Start/End: Original strand, 6716757 - 6716806
Alignment:
| Q |
587 |
caaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||| |||||||||||||||||||||||||| || |||| |||||||| |
|
|
| T |
6716757 |
caaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagact |
6716806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 26386030 - 26386067
Alignment:
| Q |
422 |
ctactcaccccaaaaaacacccctctaaatcaaacaac |
459 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
26386030 |
ctactcacctcacaaaacacccctctaaatcaaacaac |
26386067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Complemental strand, 38306329 - 38306272
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| |||||||||| ||||||||||||||| || |||| |||||||| |
|
|
| T |
38306329 |
acttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagact |
38306272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 579 - 636
Target Start/End: Original strand, 47325898 - 47325955
Alignment:
| Q |
579 |
acttgaatcaaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
|||||| |||||| ||||||||||||||| |||||||||||| |||| |||||||| |
|
|
| T |
47325898 |
acttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagact |
47325955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 334 - 559
Target Start/End: Original strand, 21349 - 21576
Alignment:
| Q |
334 |
acaatcaccaaaaccaacttcaccacctaaatcaaactccatcacaaacagccattg-aacacgaaatccatacaccacccttcgctcgctactcac-cc |
431 |
Q |
| |
|
|||| |||||||||||| |||||| |||||| || |||||||| |||||| || || || || ||||||||| | ||||| |||| |||||||||| || |
|
|
| T |
21349 |
acaaccaccaaaaccaatttcaccgcctaaaacatactccatcgcaaacaaccgctgaaaaactaaatccata-agcacccatcgc-cgctactcactcc |
21446 |
T |
|
| Q |
432 |
caaaaaacacccctctaaatcaaacaacaccttatcttcaccttagttgagccacatccaaaaatgtcatattccaac---ccttagtcggcctccacct |
528 |
Q |
| |
|
|||||||||||||| |||||||| | | ||| | ||||| | || ||||||| |||||||| || ||||||||| |||| | | || |||||| |
|
|
| T |
21447 |
aaaaaaacacccctccaaatcaaatatcctcttcacctcaccatgattaagccacacccaaaaatttc-tattccaacactccttcgccttccaccacct |
21545 |
T |
|
| Q |
529 |
ctctactcctgatccgccgaagaaaaaacac |
559 |
Q |
| |
|
|||||| |||||||| ||||||||||||||| |
|
|
| T |
21546 |
ctctacccctgatccaccgaagaaaaaacac |
21576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0620 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0620
Description:
Target: scaffold0620; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 3884 - 3817
Alignment:
| Q |
593 |
actgactcccgatctcgaatcaaaagcgactggcctaccagactctgaaaacaaatcagtaaggcacc |
660 |
Q |
| |
|
||||||||||||||||||||||||| || |||| |||||||||| ||||||||||| | ||||||| |
|
|
| T |
3884 |
actgactcccgatctcgaatcaaaattgatcggcccaccagactctaaaaacaaatcactgaggcacc |
3817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0620; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 525 - 665
Target Start/End: Complemental strand, 8251 - 8111
Alignment:
| Q |
525 |
acctctctactcctgatccgccgaagaaaaaa--caccaaatttagcccaaaggagacttgaatcaaagcactgactcccgatctcgaatcaaaagcgac |
622 |
Q |
| |
|
||||||||||||| | ||| |||||||||||| |||| |||| | |||||| | ||||||||||||| | |||| || ||||||||||||||| || |
|
|
| T |
8251 |
acctctctactcccggtccaccgaagaaaaaaaacacctaattga--ccaaagcaaacttgaatcaaagaatagacttcctatctcgaatcaaaagtgat |
8154 |
T |
|
| Q |
623 |
tggcctaccagactctgaaaacaaatcagtaaggcacctctca |
665 |
Q |
| |
|
||| ||||||||| || |||||||||||| | |||||||| |
|
|
| T |
8153 |
cggctcaccagactccaaagacaaatcagtaatgtacctctca |
8111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1613 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1613
Description:
Target: scaffold1613; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 587 - 636
Target Start/End: Original strand, 1038 - 1087
Alignment:
| Q |
587 |
caaagcactgactcccgatctcgaatcaaaagcgactggcctaccagact |
636 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
1038 |
caaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagact |
1087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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