View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3116_low_2 (Length: 685)

Name: NF3116_low_2
Description: NF3116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3116_low_2
NF3116_low_2
[»] chr8 (50 HSPs)
chr8 (255-407)||(43623362-43623513)
chr8 (608-682)||(43623712-43623786)
chr8 (61-189)||(43623175-43623303)
chr8 (513-575)||(43623616-43623678)
chr8 (18-62)||(6244405-6244449)
chr8 (18-62)||(21135217-21135261)
chr8 (18-62)||(24451377-24451421)
chr8 (18-73)||(36126619-36126677)
chr8 (18-62)||(41590226-41590270)
chr8 (18-57)||(32243577-32243616)
chr8 (18-53)||(33322435-33322470)
chr8 (20-62)||(32244755-32244797)
chr8 (20-62)||(41254817-41254859)
chr8 (18-74)||(41590692-41590751)
chr8 (18-62)||(6590159-6590203)
chr8 (18-62)||(6590627-6590671)
chr8 (18-62)||(10409491-10409535)
chr8 (18-62)||(13323078-13323122)
chr8 (19-74)||(17842343-17842401)
chr8 (18-62)||(17842826-17842870)
chr8 (18-62)||(21159734-21159778)
chr8 (18-65)||(28702008-28702056)
chr8 (18-62)||(30133883-30133927)
chr8 (18-74)||(31185832-31185891)
chr8 (18-62)||(35862934-35862978)
chr8 (18-62)||(36063779-36063823)
chr8 (18-62)||(37967428-37967472)
chr8 (18-62)||(39336886-39336930)
chr8 (18-62)||(39337874-39337918)
chr8 (18-62)||(44803420-44803464)
chr8 (18-62)||(44893750-44893794)
chr8 (20-62)||(3865584-3865626)
chr8 (18-56)||(5765608-5765646)
chr8 (20-62)||(21160138-21160180)
chr8 (18-75)||(43988508-43988568)
chr8 (20-62)||(44802370-44802412)
chr8 (18-63)||(36471179-36471224)
chr8 (18-62)||(1680862-1680906)
chr8 (18-74)||(8784456-8784515)
chr8 (18-73)||(9252524-9252582)
chr8 (18-62)||(13323906-13323950)
chr8 (18-74)||(17498847-17498906)
chr8 (18-62)||(21136299-21136343)
chr8 (18-62)||(24452457-24452501)
chr8 (18-62)||(30658337-30658381)
chr8 (18-62)||(35369083-35369127)
chr8 (18-62)||(40304880-40304924)
chr8 (18-62)||(41281654-41281698)
chr8 (18-62)||(42950238-42950282)
chr8 (18-62)||(44894766-44894810)
[»] chr4 (36 HSPs)
chr4 (18-63)||(10085380-10085425)
chr4 (18-62)||(13508762-13508806)
chr4 (18-62)||(28448743-28448787)
chr4 (18-62)||(48738403-48738447)
chr4 (18-75)||(43938296-43938356)
chr4 (18-74)||(22067978-22068037)
chr4 (18-78)||(55282982-55283045)
chr4 (18-62)||(3862377-3862421)
chr4 (18-62)||(3871134-3871178)
chr4 (21-73)||(4849974-4850029)
chr4 (18-74)||(20650750-20650809)
chr4 (18-62)||(25243958-25244002)
chr4 (18-62)||(25421962-25422006)
chr4 (18-62)||(31470857-31470901)
chr4 (18-62)||(34513373-34513417)
chr4 (18-62)||(44451981-44452025)
chr4 (20-56)||(51395971-51396007)
chr4 (18-54)||(53569057-53569093)
chr4 (18-62)||(53570903-53570947)
chr4 (18-62)||(53571885-53571929)
chr4 (19-62)||(42972676-42972719)
chr4 (18-56)||(11670020-11670058)
chr4 (18-74)||(19523076-19523135)
chr4 (18-74)||(23473836-23473895)
chr4 (18-62)||(3872933-3872977)
chr4 (18-62)||(10321590-10321634)
chr4 (18-62)||(11670990-11671034)
chr4 (18-62)||(25423040-25423084)
chr4 (18-54)||(31316443-31316479)
chr4 (18-62)||(31317912-31317956)
chr4 (18-62)||(44208770-44208814)
chr4 (18-62)||(44209838-44209882)
chr4 (20-56)||(47463317-47463353)
chr4 (18-62)||(48082808-48082852)
chr4 (18-73)||(48220242-48220298)
chr4 (18-62)||(52948117-52948161)
[»] chr6 (31 HSPs)
chr6 (18-62)||(16465421-16465465)
chr6 (18-79)||(22732354-22732417)
chr6 (18-78)||(2087315-2087378)
chr6 (18-62)||(861716-861760)
chr6 (18-62)||(5086777-5086821)
chr6 (21-76)||(17697260-17697318)
chr6 (18-62)||(33744549-33744593)
chr6 (18-65)||(29692267-29692314)
chr6 (24-62)||(20898342-20898380)
chr6 (18-74)||(30492602-30492661)
chr6 (21-62)||(30660674-30660715)
chr6 (18-62)||(939199-939243)
chr6 (18-79)||(1820860-1820923)
chr6 (18-62)||(3335523-3335567)
chr6 (18-62)||(3913154-3913198)
chr6 (18-62)||(3914776-3914820)
chr6 (18-62)||(5974695-5974739)
chr6 (18-62)||(8231099-8231143)
chr6 (18-62)||(8709702-8709746)
chr6 (18-62)||(14256501-14256545)
chr6 (18-62)||(18503335-18503379)
chr6 (18-62)||(18804144-18804188)
chr6 (18-77)||(20510369-20510431)
chr6 (18-62)||(28083300-28083344)
chr6 (25-62)||(289722-289759)
chr6 (18-62)||(5974196-5974240)
chr6 (18-62)||(17244435-17244479)
chr6 (18-62)||(17246437-17246481)
chr6 (18-50)||(21108423-21108455)
chr6 (18-54)||(22971799-22971835)
chr6 (18-54)||(23816563-23816599)
[»] chr5 (28 HSPs)
chr5 (18-62)||(21837038-21837082)
chr5 (18-62)||(42877965-42878009)
chr5 (18-75)||(40158144-40158204)
chr5 (18-62)||(3407245-3407289)
chr5 (18-62)||(4462469-4462513)
chr5 (18-62)||(19332357-19332401)
chr5 (18-62)||(22023423-22023467)
chr5 (18-62)||(37812178-37812222)
chr5 (18-62)||(40272352-40272396)
chr5 (18-56)||(43210984-43211022)
chr5 (18-62)||(8218355-8218399)
chr5 (18-78)||(8404263-8404326)
chr5 (18-62)||(13919958-13920002)
chr5 (18-62)||(17742229-17742273)
chr5 (18-62)||(19333314-19333358)
chr5 (18-62)||(38693792-38693836)
chr5 (20-62)||(4462308-4462350)
chr5 (18-75)||(6365563-6365623)
chr5 (21-72)||(26866038-26866091)
chr5 (18-62)||(2005388-2005432)
chr5 (18-62)||(4463122-4463166)
chr5 (18-54)||(8404754-8404790)
chr5 (18-62)||(10674537-10674581)
chr5 (18-62)||(13921006-13921050)
chr5 (18-62)||(18951010-18951054)
chr5 (18-62)||(26865127-26865171)
chr5 (18-62)||(34526925-34526969)
chr5 (18-50)||(38691888-38691920)
[»] chr2 (34 HSPs)
chr2 (18-62)||(9111464-9111508)
chr2 (18-57)||(9112031-9112070)
chr2 (18-62)||(3117870-3117914)
chr2 (18-62)||(13027801-13027845)
chr2 (18-62)||(30982516-30982560)
chr2 (18-62)||(31435933-31435977)
chr2 (18-62)||(31771211-31771255)
chr2 (18-62)||(32319300-32319344)
chr2 (18-74)||(41120622-41120681)
chr2 (18-56)||(35498914-35498952)
chr2 (18-62)||(1373554-1373598)
chr2 (18-62)||(4327960-4328004)
chr2 (18-73)||(14200838-14200896)
chr2 (18-62)||(20719387-20719431)
chr2 (18-62)||(32318111-32318155)
chr2 (18-62)||(43933090-43933134)
chr2 (18-62)||(44492778-44492822)
chr2 (18-79)||(37592755-37592819)
chr2 (18-63)||(20701150-20701195)
chr2 (18-55)||(20721573-20721610)
chr2 (18-74)||(25100465-25100524)
chr2 (18-74)||(35498450-35498509)
chr2 (18-62)||(3104888-3104932)
chr2 (18-62)||(3105774-3105818)
chr2 (18-62)||(3118862-3118906)
chr2 (18-62)||(7655069-7655112)
chr2 (18-62)||(8392683-8392727)
chr2 (18-62)||(10357679-10357723)
chr2 (18-62)||(21439191-21439235)
chr2 (18-62)||(23787516-23787560)
chr2 (18-62)||(23787899-23787943)
chr2 (18-62)||(30982747-30982790)
chr2 (18-62)||(34073921-34073965)
chr2 (18-62)||(43932036-43932080)
[»] chr1 (38 HSPs)
chr1 (18-62)||(27551851-27551895)
chr1 (18-56)||(25351857-25351895)
chr1 (18-62)||(11396927-11396971)
chr1 (18-62)||(29231220-29231264)
chr1 (18-54)||(41331960-41331996)
chr1 (18-62)||(42972327-42972371)
chr1 (18-62)||(49767581-49767625)
chr1 (18-62)||(52881491-52881535)
chr1 (18-72)||(36248216-36248272)
chr1 (18-62)||(12367598-12367642)
chr1 (18-62)||(12368586-12368630)
chr1 (18-54)||(19791142-19791178)
chr1 (18-62)||(25352802-25352846)
chr1 (18-62)||(26805848-26805892)
chr1 (18-62)||(30982712-30982756)
chr1 (18-62)||(36249215-36249259)
chr1 (18-62)||(36368246-36368290)
chr1 (18-62)||(46517430-46517474)
chr1 (18-62)||(51840112-51840156)
chr1 (18-62)||(52010709-52010753)
chr1 (18-62)||(52882653-52882697)
chr1 (19-62)||(11999612-11999655)
chr1 (18-57)||(12897446-12897485)
chr1 (18-57)||(37986109-37986148)
chr1 (20-62)||(2058972-2059014)
chr1 (20-62)||(49768762-49768804)
chr1 (18-62)||(12251719-12251763)
chr1 (18-62)||(21794305-21794349)
chr1 (18-62)||(21794696-21794740)
chr1 (18-62)||(26805379-26805423)
chr1 (18-62)||(29232000-29232044)
chr1 (18-62)||(30981643-30981687)
chr1 (18-62)||(35531150-35531194)
chr1 (18-62)||(46596048-46596092)
chr1 (18-62)||(47008986-47009030)
chr1 (18-62)||(48218206-48218250)
chr1 (18-62)||(48410016-48410060)
chr1 (18-62)||(51339953-51339997)
[»] scaffold0627 (1 HSPs)
scaffold0627 (18-79)||(6808-6872)
[»] chr3 (37 HSPs)
chr3 (18-56)||(8576259-8576297)
chr3 (18-74)||(53518140-53518199)
chr3 (18-62)||(29348171-29348215)
chr3 (18-62)||(33475365-33475409)
chr3 (18-62)||(34995434-34995478)
chr3 (18-62)||(41928194-41928238)
chr3 (18-62)||(44556958-44557002)
chr3 (18-62)||(52701056-52701100)
chr3 (18-62)||(54185672-54185716)
chr3 (18-74)||(11045282-11045341)
chr3 (18-62)||(8575199-8575243)
chr3 (18-62)||(23917224-23917268)
chr3 (18-62)||(31990962-31991006)
chr3 (18-62)||(33225683-33225727)
chr3 (18-62)||(33226775-33226819)
chr3 (18-62)||(44557925-44557969)
chr3 (18-62)||(44809193-44809237)
chr3 (18-62)||(45234612-45234656)
chr3 (18-62)||(45235702-45235746)
chr3 (18-62)||(45387334-45387378)
chr3 (18-62)||(50615427-50615471)
chr3 (18-62)||(53396990-53397034)
chr3 (18-57)||(21749465-21749504)
chr3 (18-72)||(23917682-23917739)
chr3 (18-79)||(3173833-3173897)
chr3 (18-79)||(45419653-45419717)
chr3 (20-62)||(53517672-53517714)
chr3 (18-62)||(116819-116863)
chr3 (18-62)||(23883689-23883733)
chr3 (18-62)||(25233217-25233261)
chr3 (18-62)||(27867970-27868014)
chr3 (18-54)||(31992004-31992040)
chr3 (18-62)||(32146897-32146941)
chr3 (18-62)||(32942883-32942927)
chr3 (18-62)||(32943966-32944010)
chr3 (18-62)||(46295417-46295461)
chr3 (18-62)||(52702016-52702060)
[»] scaffold0514 (2 HSPs)
scaffold0514 (18-62)||(6531-6575)
scaffold0514 (18-60)||(6071-6113)
[»] scaffold0125 (1 HSPs)
scaffold0125 (18-62)||(21902-21946)
[»] chr7 (37 HSPs)
chr7 (18-62)||(8832603-8832647)
chr7 (18-62)||(12908575-12908619)
chr7 (18-62)||(37107574-37107618)
chr7 (18-62)||(42974639-42974683)
chr7 (19-57)||(29156323-29156361)
chr7 (18-56)||(43083228-43083266)
chr7 (18-75)||(47791716-47791774)
chr7 (18-62)||(6588582-6588626)
chr7 (18-62)||(12621929-12621973)
chr7 (18-62)||(12932913-12932957)
chr7 (18-62)||(15131685-15131729)
chr7 (20-56)||(15492886-15492922)
chr7 (18-62)||(18798835-18798879)
chr7 (18-62)||(33624683-33624727)
chr7 (18-62)||(33625762-33625806)
chr7 (18-62)||(38199924-38199968)
chr7 (18-62)||(40304547-40304591)
chr7 (20-56)||(44080859-44080895)
chr7 (18-62)||(46043557-46043601)
chr7 (18-62)||(46330694-46330738)
chr7 (20-62)||(8082616-8082658)
chr7 (18-74)||(10620393-10620452)
chr7 (18-51)||(11397307-11397340)
chr7 (18-74)||(21109704-21109763)
chr7 (18-74)||(47792209-47792268)
chr7 (18-62)||(6589312-6589356)
chr7 (18-54)||(8081712-8081748)
chr7 (19-74)||(14990903-14990961)
chr7 (19-74)||(15420514-15420572)
chr7 (18-77)||(27727095-27727157)
chr7 (18-62)||(27728114-27728158)
chr7 (18-62)||(38198957-38199001)
chr7 (18-62)||(38593170-38593213)
chr7 (18-62)||(38595350-38595394)
chr7 (18-62)||(43574134-43574178)
chr7 (18-62)||(44167036-44167080)
chr7 (18-62)||(46044648-46044692)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-75)||(123495-123555)
[»] scaffold0097 (2 HSPs)
scaffold0097 (18-62)||(23225-23269)
scaffold0097 (18-55)||(25401-25438)
[»] scaffold0093 (1 HSPs)
scaffold0093 (18-72)||(49113-49169)
[»] scaffold1190 (2 HSPs)
scaffold1190 (18-62)||(90-134)
scaffold1190 (18-62)||(547-591)
[»] scaffold0734 (1 HSPs)
scaffold0734 (18-62)||(2739-2783)
[»] scaffold0651 (2 HSPs)
scaffold0651 (18-62)||(5714-5758)
scaffold0651 (18-54)||(7219-7255)
[»] scaffold0640 (1 HSPs)
scaffold0640 (18-62)||(3779-3823)
[»] scaffold0571 (1 HSPs)
scaffold0571 (18-62)||(8814-8858)
[»] scaffold0562 (1 HSPs)
scaffold0562 (18-62)||(3752-3796)
[»] scaffold0385 (1 HSPs)
scaffold0385 (18-62)||(10306-10350)
[»] scaffold0199 (1 HSPs)
scaffold0199 (18-62)||(6099-6143)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-62)||(17733-17777)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-62)||(240355-240399)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 255 - 407
Target Start/End: Original strand, 43623362 - 43623513
Alignment:
Q  255 gcagtgctatatgatgcaaatgaaataacacatgacactgaatacgataaaatgtgggtgagccactggtgtcgtaacttttttaactagtttctttttt 354  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |  |||||||||||||    
T  43623362 gcagtgctatatgatgcaaatgaa-taacacatgacactgaatacgataaaatatgggtgagccactggtgtcataactttttaacttagtttctttttt 43623460  T
Q  355 aatttaatagtagtgctatatgatgcaaatgacacttaaataagggttgtctg 407  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  43623461 aatttaaaagcagtgctatatgatgcaaatgacacttaaataagggttgtctg 43623513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 608 - 682
Target Start/End: Original strand, 43623712 - 43623786
Alignment:
Q  608 cgtcggtaatgaacagtgttccaatggcaactgtgcatgacacaatgatgcattcgttgctattcatctcactcg 682  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  43623712 cgtcggtaatgaacagtgttccaatggcaactgtgcatgacacaatgatgcatttgttgctattcatctctctcg 43623786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 61 - 189
Target Start/End: Original strand, 43623175 - 43623303
Alignment:
Q  61 aatatttaacccttattttctttttatgctagacttgtttatttttacacacannnnnnnnnnnnnnnnnnnnnnnttaccctgaatctgcaatgttcca 160  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||                       ||||||||||||||||||||||||    
T  43623175 aatatttaacccttattttctttttatgttagacttgtttatttttacacacacaaaaaacaaacaaacaaaaaaattaccctgaatctgcaatgttcca 43623274  T
Q  161 cttctctgtccttagtgtgtgagtttcga 189  Q
    |||||||||||||||||||||||||||||    
T  43623275 cttctctgtccttagtgtgtgagtttcga 43623303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 575
Target Start/End: Original strand, 43623616 - 43623678
Alignment:
Q  513 aatgtaaagtttccatattaatctttttaaccaatgtcctatggcactagttaacattcccat 575  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  43623616 aatgtaaagtttttatattaatctttttaaccaatgtcctatgacactagttgacattcccat 43623678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6244405 - 6244449
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  6244405 agtaaggactaaacttaaaaggtcccaattttatagggacaaaaa 6244449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21135261 - 21135217
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  21135261 agtaaggactaaacttaaaatgtctcaattttatagggactaaaa 21135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 24451421 - 24451377
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  24451421 agtaaggactaaacttaaaatgtctcaattttatagggactaaaa 24451377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 36126619 - 36126677
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaa---atatttaaccct 73  Q
    ||||||||||||||||||||| |||||||||||||||||| |||   ||||||||||||    
T  36126619 agtaaggactaaacttaaaagttctcaattttatagggaccaaacacatatttaaccct 36126677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 41590270 - 41590226
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  41590270 agtaaggactaaacttaaaagttctcaattttatagggaccaaaa 41590226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 32243616 - 32243577
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac 57  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  32243616 agtaaggactaaacttaaaatgtctcaattttatagggac 32243577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 33322470 - 33322435
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatag 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  33322470 agtaaggactaaacttaaaaggtctcaattttatag 33322435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 32244755 - 32244797
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  32244755 taaggactaaacttaaaaggtcccaattttatagggtcaaaaa 32244797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 41254859 - 41254817
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  41254859 taaggactaaacttaaaaagtctcaattttatagagacaaaaa 41254817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 41590692 - 41590751
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||||||||||||||||||| |||||||||||| ||   ||| |||||||||||||    
T  41590692 agtaaggactaaacttaaaaggtcccaattttataggaactaaaaacatatttaaccctt 41590751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6590203 - 6590159
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  6590203 agtaaggactaaacttaaaagatcccaattttatagggaccaaaa 6590159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6590627 - 6590671
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||    
T  6590627 agtaaggactaaacttagaagttcccaattttatagggacaaaaa 6590671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 10409535 - 10409491
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  10409535 agtaaggactaaacttaaaaggtcccaattttacagggaccaaaa 10409491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 13323122 - 13323078
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||    
T  13323122 agtaaggactaaacttaaaatgtctcaattttacagggactaaaa 13323078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 17842401 - 17842343
Alignment:
Q  19 gtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||||||||||  ||||||||||||||||||||||   ||| |||||||||||||    
T  17842401 gtaaggactaaactttgaaggtctcaattttatagggactaaaaatatatttaaccctt 17842343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 17842826 - 17842870
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||    
T  17842826 agtaaggactaaacttaaaagttttcaattttatagggaccaaaa 17842870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21159778 - 21159734
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||    
T  21159778 agtaaggactaaacttagaagttctcaattttatagggaccaaaa 21159734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 28702008 - 28702056
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga-caaaaatat 65  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  28702008 agtaaggactaaacataaaagatctcaattttatagggatcaaaaatat 28702056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 30133883 - 30133927
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||    
T  30133883 agtaaggactaaacttaaaaaatctcaattttatagggaccaaaa 30133927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 31185832 - 31185891
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga-caaaa--atatttaaccctt 74  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||  |||||||||||||    
T  31185832 agtaaggactaaacttataaggtcgcaattttatagggatcaaaaacatatttaaccctt 31185891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 35862978 - 35862934
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  35862978 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 35862934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 36063779 - 36063823
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  36063779 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 36063823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 37967472 - 37967428
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||    
T  37967472 agtaaagactaaacttaaaagatctcaattttatagggacgaaaa 37967428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 39336930 - 39336886
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  39336930 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 39336886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 39337874 - 39337918
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  39337874 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 39337918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44803420 - 44803464
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||    
T  44803420 agtaaggactaaacttagaaggtctcaattttacagggactaaaa 44803464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 44893794 - 44893750
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||    
T  44893794 agtaaggactaaatttaaaaggtcccaattttatagggaccaaaa 44893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 3865626 - 3865584
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||    
T  3865626 taaggaataaacttaaaaggtcccaattttatagggaccaaaa 3865584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 5765646 - 5765608
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga 56  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  5765646 agtaaggactaaacttagaaggtcgcaattttataggga 5765608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 21160138 - 21160180
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||    
T  21160138 taaggattaaacttaaaatgtcccaattttatagggacaaaaa 21160180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 43988508 - 43988568
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctta 75  Q
    ||||||||||||||||| |||  |||||||||||||||||   ||| ||||||||||||||    
T  43988508 agtaaggactaaacttagaagacctcaattttatagggaccaaaaacatatttaaccctta 43988568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 44802412 - 44802370
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||| || ||||||||||||||||||| ||||    
T  44802412 taaggactaaacttagaatgtctcaattttatagggactaaaa 44802370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 36471179 - 36471224
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaat 63  Q
    |||||||||||||||| |||| |||| ||||||||||||| |||||    
T  36471179 agtaaggactaaacttgaaagatctctattttatagggaccaaaat 36471224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 1680906 - 1680862
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  1680906 agtaaggactaaacttaagaggtcccaattttttagggaccaaaa 1680862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 8784515 - 8784456
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga-caaaa--atatttaaccctt 74  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||  |||||||||||||    
T  8784515 agtaaggactaaacttaaaatatctgaattttatagggatcaaaaacatatttaaccctt 8784456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 9252582 - 9252524
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccct 73  Q
    |||||||||||||| |||||  | ||||||||||||||||   ||||||||||||||||    
T  9252582 agtaaggactaaacataaaatatttcaattttatagggactaaaaaaatatttaaccct 9252524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 13323906 - 13323950
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||||| |||| ||||    
T  13323906 agtaaggactaaacttaaaatgcctcaattttataaggactaaaa 13323950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 17498847 - 17498906
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatag-ggacaaaa--atatttaaccctt 74  Q
    |||||||||||||||||||| ||| ||||||||||| | ||||||  |||||||||||||    
T  17498847 agtaaggactaaacttaaaaagtcacaattttatagagaacaaaaacatatttaaccctt 17498906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 21136299 - 21136343
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  21136299 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 21136343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 24452457 - 24452501
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  24452457 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 24452501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30658381 - 30658337
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||    
T  30658381 agtaaggactaaacttagaagttcacaattttatagggaccaaaa 30658337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 35369127 - 35369083
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| |  |||||||||||||||| ||||    
T  35369127 agtaaggactaaacttaaaatgcatcaattttatagggactaaaa 35369083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 40304924 - 40304880
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| |||||||||| |||||| |||| ||||    
T  40304924 agtaaggactaaacttagaaggtctcaagtttataaggaccaaaa 40304880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 41281654 - 41281698
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||| | ||||||||||||||||| ||||    
T  41281654 agtaaggattaaacttaaaatgcctcaattttatagggactaaaa 41281698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42950238 - 42950282
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||  ||||||||||||||| ||||    
T  42950238 agtaaggactaaacttaaaaagtaacaattttatagggaccaaaa 42950282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44894766 - 44894810
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||    
T  44894766 agtaagggctaaacttaaaagatcccaattttatagggaccaaaa 44894810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 10085425 - 10085380
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaat 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  10085425 agtaaggactaaacttaaaaggtctcaattttatagggactaaaat 10085380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 13508806 - 13508762
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  13508806 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 13508762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 28448743 - 28448787
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  28448743 agtaaggactaaacttgaaaggtcccaattttatagggacaaaaa 28448787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 48738447 - 48738403
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  48738447 agtaaggactaaacttaaaagatctcaattttatagggaccaaaa 48738403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 43938296 - 43938356
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctta 75  Q
    ||||||||||||||||| ||| ||||||||||||||||||   ||| ||||||||||||||    
T  43938296 agtaaggactaaacttagaagttctcaattttatagggaccaaaaacatatttaaccctta 43938356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 22068037 - 22067978
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    ||||||||||||||||| ||||| ||||||||||||||||   ||| |||||||||||||    
T  22068037 agtaaggactaaacttataaggtatcaattttatagggaccaaaaatatatttaaccctt 22067978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 55283045 - 55282982
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaa---atatttaacccttattt 78  Q
    ||||||||||||| |||||||| |||||||||||| ||| ||||   |||||||||||||||||    
T  55283045 agtaaggactaaatttaaaaggcctcaattttataaggataaaaaatatatttaacccttattt 55282982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3862421 - 3862377
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||    
T  3862421 agtaaggattaaacttaaaaggtctctattttataaggacaaaaa 3862377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3871178 - 3871134
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||    
T  3871178 agtaaggattaaacttaaaaggtctctattttataaggacaaaaa 3871134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 4850029 - 4849974
Alignment:
Q  21 aaggactaaacttaaaaggtctcaattttataggga-caaaa--atatttaaccct 73  Q
    ||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  4850029 aaggattaaacttaaaaggtctcaattttatagggatcaaaaacatatttaaccct 4849974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 20650750 - 20650809
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggg-acaaaa--atatttaaccctt 74  Q
    |||||||||||||||||||| || |||||||||||||| ||||||  |||||||||||||    
T  20650750 agtaaggactaaacttaaaatgtttcaattttatagggtacaaaaacatatttaaccctt 20650809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 25243958 - 25244002
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  25243958 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 25244002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 25422006 - 25421962
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  25422006 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 25421962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31470901 - 31470857
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||    
T  31470901 agtaatgactaaacttaaaatgtctcaattttatagggactaaaa 31470857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 34513373 - 34513417
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||    
T  34513373 agtacggactaaacttaaaaggttccaattttatagggacaaaaa 34513417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 44452025 - 44451981
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||    
T  44452025 agtaaggactaaacttataaggtcacaattttatagggaccaaaa 44451981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 51395971 - 51396007
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||||||| ||||||||||||||    
T  51395971 taaggactaaacttaaaaggtcccaattttataggga 51396007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 53569093 - 53569057
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    |||||||||||||||||||| ||||||||||||||||    
T  53569093 agtaaggactaaacttaaaatgtctcaattttatagg 53569057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 53570947 - 53570903
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  53570947 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 53570903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 53571885 - 53571929
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  53571885 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 53571929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 42972719 - 42972676
Alignment:
Q  19 gtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||||||||| ||||    
T  42972719 gtaaggactaaacttaaaagttttcaattttatagggaccaaaa 42972676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 11670058 - 11670020
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  11670058 agtaaggactaaacttaaaatgcctcaattttataggga 11670020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 19523076 - 19523135
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||||||||||| ||||||| | |||||||||||||   ||| |||||||||||||    
T  19523076 agtaaggactaaacttgaaaggtccctattttatagggaccaaaaacatatttaaccctt 19523135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 23473836 - 23473895
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||||||||||| ||| ||||| |||||||||||||   ||| |||||||||||||    
T  23473836 agtaaggactaaacttcaaaagtctcgattttatagggactaaaaacatatttaaccctt 23473895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3872977 - 3872933
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||||||| | ||||||||||||| ||||    
T  3872977 agtaaggattaaacttaaaaggtccctattttatagggaccaaaa 3872933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 10321634 - 10321590
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  10321634 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 10321590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 11670990 - 11671034
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | || |||||||||||||| ||||    
T  11670990 agtaaggactaaacttaaaatgccttaattttatagggactaaaa 11671034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 25423040 - 25423084
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  25423040 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 25423084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 31316479 - 31316443
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    |||||||||||||||||||| | ||||||||||||||    
T  31316479 agtaaggactaaacttaaaatgcctcaattttatagg 31316443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 31317912 - 31317956
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||| ||||||| ||||    
T  31317912 agtaaggactaaacttaaaatgcctcaattttttagggactaaaa 31317956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 44208814 - 44208770
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  44208814 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 44208770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44209838 - 44209882
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||| ||| ||||    
T  44209838 agtaaggactaaacttaaaatgcctcaattttatagagactaaaa 44209882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 47463353 - 47463317
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||| |||| |||||||||||||    
T  47463353 taaggactaaacttaaaatgtcttaattttataggga 47463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 48082808 - 48082852
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||| |||||| |||||| ||||||||||||||| ||||    
T  48082808 agtaaggacttaacttagaaggtcgcaattttatagggaccaaaa 48082852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 48220242 - 48220298
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac-aaaaatatttaaccct 73  Q
    |||||||||||||||||||| ||| |||||||||| |||| | ||| ||||||||||    
T  48220242 agtaaggactaaacttaaaaagtcccaattttataaggactataaacatttaaccct 48220298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 52948117 - 52948161
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||| |||||||| ||| |||||||||||||| ||||    
T  52948117 agtaaggactaatcttaaaagatcttaattttatagggaccaaaa 52948161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 16465421 - 16465465
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  16465421 agtaaggactaaacttaaaaggtctcaattttatagggactaaaa 16465465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 22732354 - 22732417
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaa--atatttaacccttatttt 79  Q
    |||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||||| ||||    
T  22732354 agtaaggactaaacttaaaaggtcccaattttgtagggacaaaaacatatttaacccttttttt 22732417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2087378 - 2087315
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaacccttattt 78  Q
    |||||||||||||||| ||||||| |||||||||||||||   ||| |||||||||||||||||    
T  2087378 agtaaggactaaacttgaaaggtcccaattttatagggaccaaaaatatatttaacccttattt 2087315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 861716 - 861760
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  861716 agtaaggactaaacttaaaaggtcacaattttatagggactaaaa 861760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5086777 - 5086821
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  5086777 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 5086821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 17697318 - 17697260
Alignment:
Q  21 aaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaacccttat 76  Q
    |||||||||||||||||| ||||||||||||||||||   ||| |||||||||||||||    
T  17697318 aaggactaaacttaaaagttctcaattttatagggaccaaaaacatatttaacccttat 17697260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 33744593 - 33744549
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  33744593 agtaaggactaaacttaaaaggtcgcaattttatagggaccaaaa 33744549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 29692267 - 29692314
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaatat 65  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  29692267 agtaaagactaaacttaaaaggtttcaattttatagggataaaaatat 29692314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 20898342 - 20898380
Alignment:
Q  24 gactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  20898342 gactaaacttaaaaggtctcaattttatagggactaaaa 20898380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 30492661 - 30492602
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||||||||||||||| ||| |||||||||||||||   ||| |||||||||||||    
T  30492661 agtaaggactaaacttaaaaagtcccaattttatagggaccaaaaacatatttaaccctt 30492602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 30660715 - 30660674
Alignment:
Q  21 aaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  30660715 aaggactaaacttaaaaagtctcaattttatagggaccaaaa 30660674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 939199 - 939243
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||    
T  939199 agtaaggactaaacttaaaagttctcaattttatatggaccaaaa 939243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 1820923 - 1820860
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaa--atatttaacccttatttt 79  Q
    |||||| ||||||||||||||||| ||||||||||||  |||||  |||||||||| |||||||    
T  1820923 agtaagaactaaacttaaaaggtcccaattttataggaccaaaaatatatttaacctttatttt 1820860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 3335523 - 3335567
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||    
T  3335523 agtaaggactaaacttaaaatgtctcgattttatagggactaaaa 3335567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3913198 - 3913154
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  3913198 agtaaggactaaacttaaaagatcccaattttatagggaccaaaa 3913154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 3914776 - 3914820
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||    
T  3914776 agtaaggactaaacttaaaaagtcccaattttatagggaccaaaa 3914820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5974695 - 5974739
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  5974695 agtaaggactaaacttaaaaggtcccaattttacagggaccaaaa 5974739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8231143 - 8231099
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  8231143 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 8231099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8709746 - 8709702
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  8709746 agtaaggactaaacttaaaaggtcccaattttacagggaccaaaa 8709702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 14256501 - 14256545
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||    
T  14256501 agtaaggactaaacttaaaagctttcaattttatagggaccaaaa 14256545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18503335 - 18503379
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  18503335 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 18503379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18804144 - 18804188
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||    
T  18804144 agtaaggactaaacttaaaatatctcaattttatagggaccaaaa 18804188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 20510431 - 20510369
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaa---atatttaacccttatt 77  Q
    |||||||| |||||||||||| || ||||||||||||||| |||   ||||||||||||||||    
T  20510431 agtaaggagtaaacttaaaagatcccaattttatagggaccaaacacatatttaacccttatt 20510369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 28083300 - 28083344
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||    
T  28083300 agtaaggactatacttaaaatgtctcaattttatagggaccaaaa 28083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 289722 - 289759
Alignment:
Q  25 actaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  289722 actaaacttaaaaggtcccaattttataaggacaaaaa 289759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 5974240 - 5974196
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| |||||||||| ||| |||||||||||||||||| ||||    
T  5974240 agtaagaactaaacttagaagttctcaattttatagggaccaaaa 5974196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 17244479 - 17244435
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||||| |||| ||||    
T  17244479 agtaaggactaaacttaaaatgcctcaattttataaggactaaaa 17244435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 17246437 - 17246481
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||    
T  17246437 agtaagaactaaacttaaaatgcctcaattttatagggactaaaa 17246481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 21108423 - 21108455
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaatttta 50  Q
    |||||||||||||||||||||||| ||||||||    
T  21108423 agtaaggactaaacttaaaaggtcccaatttta 21108455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 22971835 - 22971799
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    |||||||||||||||||||| | ||||||||||||||    
T  22971835 agtaaggactaaacttaaaatgcctcaattttatagg 22971799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 23816563 - 23816599
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    |||||||||||||||||||| | ||||||||||||||    
T  23816563 agtaaggactaaacttaaaatgcctcaattttatagg 23816599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21837082 - 21837038
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  21837082 agtaaggactaaacttaaaaggtctcaattttatagggactaaaa 21837038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42877965 - 42878009
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  42877965 agtaaggactaaacttaaaaggtctcaattttatagggaccaaaa 42878009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 40158204 - 40158144
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctta 75  Q
    |||||||||||||||||||||||| |||||||||||||||   ||| ||||||||||||||    
T  40158204 agtaaggactaaacttaaaaggtcccaattttatagggactaaaaacatatttaaccctta 40158144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 3407245 - 3407289
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  3407245 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 3407289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 4462513 - 4462469
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  4462513 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 4462469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 19332401 - 19332357
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  19332401 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 19332357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 22023423 - 22023467
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  22023423 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 22023467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 37812222 - 37812178
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  37812222 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 37812178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 40272396 - 40272352
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  40272396 agtaaggactaaatttaaaaggtcccaattttatagggacaaaaa 40272352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 43210984 - 43211022
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  43210984 agtaaggactaaacttaaaaggtcccaattttataggga 43211022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8218355 - 8218399
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  8218355 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 8218399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 8404326 - 8404263
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga-caaaa--atatttaacccttattt 78  Q
    ||||||||||||||||||||| ||  ||||||||||||| |||||  |||||||||||||||||    
T  8404326 agtaaggactaaacttaaaagttcctaattttatagggatcaaaaacatatttaacccttattt 8404263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 13920002 - 13919958
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  13920002 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 13919958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 17742273 - 17742229
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||    
T  17742273 agtaagaactaaacttaaaaggtcccaattttatagggaccaaaa 17742229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 19333314 - 19333358
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  19333314 agtaaggactaaacttaaaaggtcccaattttacagggaccaaaa 19333358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 38693792 - 38693836
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  38693792 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 38693836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 4462308 - 4462350
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||    
T  4462308 taaggactaaacttaaatggtcccaattttatagggactaaaa 4462350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 6365563 - 6365623
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctta 75  Q
    ||||||||||||||||||| |||  |||||||||||||||   ||| ||||||||||||||    
T  6365563 agtaaggactaaacttaaagggttccaattttatagggactaaaaagatatttaaccctta 6365623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 26866038 - 26866091
Alignment:
Q  21 aaggactaaacttaaaaggtctcaattttatagggac--aaaaatatttaaccc 72  Q
    ||||||||||||||||| | |||||||||||||||||  ||| |||||||||||    
T  26866038 aaggactaaacttaaaatgcctcaattttatagggactaaaacatatttaaccc 26866091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 2005388 - 2005432
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||||    
T  2005388 agtaacgactaaacttagaaggtcacaattttatagggaccaaaa 2005432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 4463122 - 4463166
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||    
T  4463122 agtaaggactaaacttagaagttcccaattttatagggactaaaa 4463166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 8404754 - 8404790
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    ||||| || ||||||||||||||||||||||||||||    
T  8404754 agtaaagattaaacttaaaaggtctcaattttatagg 8404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 10674581 - 10674537
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||||    
T  10674581 agtaaagactaaacttataaggtcccaattttatagggaccaaaa 10674537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 13921006 - 13921050
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  13921006 agtaaggactaaacttaaaatgcctcaattttaaagggactaaaa 13921050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18951010 - 18951054
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  18951010 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 18951054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 26865171 - 26865127
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||    
T  26865171 agtaaggactaaacttaaaatgactcacttttatagggactaaaa 26865127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 34526969 - 34526925
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||||| |||| ||||    
T  34526969 agtaaggactaaacttaaaatggctcaattttataaggactaaaa 34526925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 38691920 - 38691888
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaatttta 50  Q
    |||||||||||||||||||| ||||||||||||    
T  38691920 agtaaggactaaacttaaaatgtctcaatttta 38691888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 9111508 - 9111464
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  9111508 agtaaggactaaacttaaaaggtcccaattttatagggacaaaaa 9111464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 9112031 - 9112070
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac 57  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9112031 agtaaggactaaacttaaaaggtctcaattttatagggac 9112070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3117914 - 3117870
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  3117914 agtaaggactaaacttaaaagatctcaattttatagggaccaaaa 3117870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 13027801 - 13027845
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  13027801 agtaaggactaaacttaaaatgtctcaattttatagggaccaaaa 13027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30982560 - 30982516
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||    
T  30982560 agtaaggattaaacttaaaaggtctcaattttatagggaccaaaa 30982516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31435977 - 31435933
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||    
T  31435977 agtaaagactaaacttaaaaggtctcaattttatagggactaaaa 31435933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31771255 - 31771211
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  31771255 agtaaggactaagcttaaaaggtctcaattttatagggaccaaaa 31771211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 32319300 - 32319344
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  32319300 agtaagaactaaacttaaaaggtcccaattttatagggacaaaaa 32319344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 41120681 - 41120622
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga-caaaa--atatttaaccctt 74  Q
    |||||||||||||||||||||||| |||||||||||||| |||||  |||||||||||||    
T  41120681 agtaaggactaaacttaaaaggtcccaattttatagggatcaaaaacatatttaaccctt 41120622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 35498914 - 35498952
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga 56  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  35498914 agtaaggactaaacttaaaagttctcaattttataggga 35498952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 1373554 - 1373598
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  1373554 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 1373598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 4327960 - 4328004
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  4327960 agtaaggactaaacttaaaaggtcccaattttacagggactaaaa 4328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 14200896 - 14200838
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaa---atatttaaccct 73  Q
    ||||||||||||||||||||| | |||||||||||||||| |||   ||||||||||||    
T  14200896 agtaaggactaaacttaaaagatgtcaattttatagggaccaaatacatatttaaccct 14200838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 20719387 - 20719431
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  20719387 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 20719431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32318155 - 32318111
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  32318155 agtaaggactaaacttaaaagatcccaattttatagggaccaaaa 32318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 43933090 - 43933134
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  43933090 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 43933134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 44492822 - 44492778
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  44492822 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 44492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 37592819 - 37592755
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaacccttatttt 79  Q
    ||||||||||||||||||||| | |||||||||||| |||   ||| ||||||||||||| ||||    
T  37592819 agtaaggactaaacttaaaagttttcaattttatagagaccagaaacatatttaacccttgtttt 37592755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 20701195 - 20701150
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaat 63  Q
    |||||| ||||||||||||| | ||||||||||||||||| |||||    
T  20701195 agtaagcactaaacttaaaatgcctcaattttatagggactaaaat 20701150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 20721573 - 20721610
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggg 55  Q
    |||||||||||||||||||| | |||||||||||||||    
T  20721573 agtaaggactaaacttaaaatgcctcaattttataggg 20721610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 25100524 - 25100465
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    ||||||||||| |||| ||||||| |||||||||||||||   ||| |||||||||||||    
T  25100524 agtaaggactagacttgaaaggtcccaattttatagggaccaaaaacatatttaaccctt 25100465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 35498509 - 35498450
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    ||||| |||||||||||||||||| |||||||||||| ||   ||| |||||||||||||    
T  35498509 agtaaagactaaacttaaaaggtcccaattttataggaactaaaaacatatttaaccctt 35498450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3104932 - 3104888
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||    
T  3104932 agtaagaactaaacttaaaatgcctcaattttatagggactaaaa 3104888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 3105774 - 3105818
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  3105774 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 3105818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 3118862 - 3118906
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| |||||||||||| || ||||||||||||||| ||||    
T  3118862 agtaaggattaaacttaaaagatcccaattttatagggaccaaaa 3118906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 7655069 - 7655112
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| |||||||||||||| || ||||||||||||||||||||    
T  7655069 agtaagaactaaacttaaaag-tcccaattttatagggacaaaaa 7655112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8392683 - 8392727
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||| ||| |||||| ||||||||||||||| ||||    
T  8392683 agtaaggactaaatttagaaggtcccaattttatagggaccaaaa 8392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 10357679 - 10357723
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| |  ||||||||||||||||||||    
T  10357679 agtaaggactaaacttagaagtttccaattttatagggacaaaaa 10357723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21439235 - 21439191
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| || | ||||||||||||||||| ||||    
T  21439235 agtaaggactaaacttacaatgcctcaattttatagggactaaaa 21439191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 23787560 - 23787516
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||| |||||||||| | ||||||||||||||||| ||||    
T  23787560 agtaaggacgaaacttaaaatgcctcaattttatagggactaaaa 23787516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 23787899 - 23787943
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| |  |||||||||||||||| ||||    
T  23787899 agtaaggactaaacttaaaatgaatcaattttatagggactaaaa 23787943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 30982747 - 30982790
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  30982747 agtaaggactaaacttaaa-ggtcccaattttatagggaccaaaa 30982790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 34073921 - 34073965
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||| |||||||||  ||||||||||||||| ||||    
T  34073921 agtaaggactaaatttaaaaggttccaattttatagggactaaaa 34073965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 43932080 - 43932036
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  43932080 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 43932036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 27551851 - 27551895
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  27551851 agtaaggactaaacttaaaaggtctcaattttatagggaccaaaa 27551895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 25351895 - 25351857
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25351895 agtaaggactaaacttaaaaggtctcaattttataggga 25351857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 11396971 - 11396927
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  11396971 agtaaggactaaacttaaaaggtctcaattgtatagggaccaaaa 11396927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 29231264 - 29231220
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  29231264 agtaaggactaaacttaaaatgtctcaattttatagggactaaaa 29231220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 41331960 - 41331996
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    |||||||||||||||||||||||||||||||||||||    
T  41331960 agtaaggactaaacttaaaaggtctcaattttatagg 41331996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42972327 - 42972371
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  42972327 agtaaggactaaacttaaaagttctcaattttatagggaccaaaa 42972371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 49767625 - 49767581
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  49767625 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 49767581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 52881535 - 52881491
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  52881535 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 52881491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 36248272 - 36248216
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac--aaaaatatttaaccc 72  Q
    |||||||||||||||||||| | |||||||||||||||||  ||| |||||||||||    
T  36248272 agtaaggactaaacttaaaatgcctcaattttatagggactaaaacatatttaaccc 36248216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 12367642 - 12367598
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  12367642 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 12367598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12368586 - 12368630
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  12368586 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 12368630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 19791178 - 19791142
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    |||||||||||||||||||||||| ||||||||||||    
T  19791178 agtaaggactaaacttaaaaggtcccaattttatagg 19791142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 25352802 - 25352846
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  25352802 agtaaggactaaacttaaaagctcacaattttatagggaccaaaa 25352846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 26805848 - 26805892
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||    
T  26805848 agtaagaactaaacttaaaaggtctgaattttatagggataaaaa 26805892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 30982712 - 30982756
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  30982712 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 30982756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 36249215 - 36249259
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  36249215 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 36249259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 36368246 - 36368290
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  36368246 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 36368290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 46517430 - 46517474
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||    
T  46517430 agtaaggactaaacttaaaatgtcccaattttatagggacgaaaa 46517474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 51840156 - 51840112
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| || |||||||||||||||| ||||    
T  51840156 agtaaggactaaacttaaaatgtttcaattttatagggaccaaaa 51840112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 52010709 - 52010753
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  52010709 agtaaggaataaacttaaaaggtcccaattttatagggaccaaaa 52010753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 52882653 - 52882697
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| |||||||||||| || ||||||||||||||||||||    
T  52882653 agtaaggattaaacttaaaagatcccaattttatagggacaaaaa 52882697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 11999655 - 11999612
Alignment:
Q  19 gtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||    
T  11999655 gtaaggactaaacttaaaatgcctcaattttatagggactaaaa 11999612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 12897446 - 12897485
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac 57  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  12897446 agtaaggactaaacttaaaaggttccaattttatagggac 12897485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 37986148 - 37986109
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac 57  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  37986148 agtaaggactaaacttaaaatgcctcaattttatagggac 37986109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 2059014 - 2058972
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||| |||||| |||||||| ||||    
T  2059014 taaggactaaacttaaaaggtcccaatttcatagggactaaaa 2058972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 49768762 - 49768804
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||| || ||||||||||||||| ||||    
T  49768762 taaggactaaacttaaaagatcccaattttatagggaccaaaa 49768804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12251719 - 12251763
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| || ||||||||||| ||| ||||    
T  12251719 agtaaggactaaacttaaaagatcccaattttatagagaccaaaa 12251763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21794349 - 21794305
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||| | ||||||||| ||||| ||||    
T  21794349 agtaaggactaaacttaaaaggccccaattttatcgggaccaaaa 21794305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 21794696 - 21794740
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||    
T  21794696 agtaaggactaaacttataagttcccaattttatagggaccaaaa 21794740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 26805423 - 26805379
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||    
T  26805423 agtaaggactaaacttagaagttcccaattttatagggaccaaaa 26805379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 29232000 - 29232044
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||| |||||||||||| |||||||||||| |||||| ||||    
T  29232000 agtaagggctaaacttaaaatgtctcaattttacagggactaaaa 29232044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30981687 - 30981643
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  30981687 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 30981643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 35531150 - 35531194
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||||||| ||||    
T  35531150 agtaaggactaaacttagaagttcccaattttatagggaccaaaa 35531194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 46596092 - 46596048
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  46596092 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 46596048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 47008986 - 47009030
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||| ||||||||||||||  |||||||||||||| ||||    
T  47008986 agtaaggacaaaacttaaaaggtcctaattttatagggaccaaaa 47009030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 48218206 - 48218250
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| || ||||||| ||||||| ||||    
T  48218206 agtaaggactaaacttaaaagatcccaattttttagggaccaaaa 48218250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 48410060 - 48410016
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||| |||||||||| ||| ||||||||||||||| ||||    
T  48410060 agtaaggacaaaacttaaaatgtcccaattttatagggaccaaaa 48410016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 51339953 - 51339997
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| | ||||||||||| |||| ||||    
T  51339953 agtaaggactaaacttaaaagatttcaattttataaggaccaaaa 51339997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 6872 - 6808
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaacccttatttt 79  Q
    |||||||||||||||||||||||| |||||||||||||||   ||| |||||||||| |||||||    
T  6872 agtaaggactaaacttaaaaggtcccaattttatagggactaaaaatatatttaacctttatttt 6808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 8576259 - 8576297
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8576259 agtaaggactaaacttaaaaggtctcaattttataggga 8576297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 53518140 - 53518199
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||||||||||||||||||| |||||||||||||||   ||| |||||||||||||    
T  53518140 agtaaggactaaacttaaaaggtcccaattttatagggactaaaaacatatttaaccctt 53518199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 29348215 - 29348171
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  29348215 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 29348171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 33475409 - 33475365
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  33475409 agtaaggactaaacttaaaaggttccaattttatagggacaaaaa 33475365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 34995478 - 34995434
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  34995478 agtaaggactaatcttaaaaggtctcaattttatagggaccaaaa 34995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 41928194 - 41928238
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  41928194 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 41928238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44556958 - 44557002
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  44556958 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 44557002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 52701100 - 52701056
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||    
T  52701100 agtaaagactaaacttaaaaggtctcaattttatagggaccaaaa 52701056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 54185672 - 54185716
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  54185672 agtaaggactaaacttaaaatgtctcaattttatagggactaaaa 54185716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 11045341 - 11045282
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||| ||||||||||||||| |||||||||||||||   ||| |||||||||||||    
T  11045341 agtaaggattaaacttaaaaggtcccaattttatagggacctaaaacatatttaaccctt 11045282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8575243 - 8575199
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  8575243 agtaaggactaaacttaaaagattccaattttatagggacaaaaa 8575199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 23917268 - 23917224
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  23917268 agtaaggactaaacttaaaagatctcaattttatagagaccaaaa 23917224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31991006 - 31990962
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||    
T  31991006 agtaaagattaaacttaaaaggtctcaattttatagggaccaaaa 31990962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 33225727 - 33225683
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||    
T  33225727 agtaaggactaaacttagaagatctcaattttatagggaccaaaa 33225683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 33226775 - 33226819
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| |||||||||| |||||||||||||||||||||| ||||    
T  33226775 agtaagaactaaacttagaaggtctcaattttatagggaccaaaa 33226819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44557925 - 44557969
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  44557925 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 44557969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44809193 - 44809237
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
T  44809193 agtaaggactaaacttaaaaggttccaattttatagggaccaaaa 44809237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 45234656 - 45234612
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  45234656 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 45234612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 45235702 - 45235746
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  45235702 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 45235746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 45387378 - 45387334
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  45387378 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 45387334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 50615427 - 50615471
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  50615427 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 50615471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 53397034 - 53396990
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||    
T  53397034 agtaaggactaaacttataatgtctcaattttatagggactaaaa 53396990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 21749504 - 21749465
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac 57  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  21749504 agtaaggactgaacttaaaaggtcccaattttatagggac 21749465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 23917682 - 23917739
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccc 72  Q
    ||||||||||||||||| ||  ||||||||||||||||||   |||||||||||||||    
T  23917682 agtaaggactaaacttagaaattctcaattttatagggaccaaaaaaatatttaaccc 23917739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 3173833 - 3173897
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaa---atatttaacccttatttt 79  Q
    |||||||| ||||||||||||||| ||||| ||||||||| |||   |||||||||||| |||||    
T  3173833 agtaaggattaaacttaaaaggtcccaattgtatagggaccaaagacatatttaaccctaatttt 3173897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 45419717 - 45419653
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaacccttatttt 79  Q
    ||||||||||||||| | ||| || |||||||||||||||   ||| ||||||||||||||||||    
T  45419717 agtaaggactaaactcagaagttcccaattttatagggaccaaaaacatatttaacccttatttt 45419653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 53517714 - 53517672
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| |||||||||||| |||||||||||||||||| ||||    
T  53517714 taaggattaaacttaaaagttctcaattttatagggaccaaaa 53517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 116863 - 116819
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||| ||||||||||||| ||||    
T  116863 agtaaggactaaacttaaaatgcctccattttatagggactaaaa 116819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 23883689 - 23883733
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||| ||| ||| ||||||||||||||| ||||    
T  23883689 agtaaggactaaacttgaaaagtcccaattttatagggaccaaaa 23883733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 25233217 - 25233261
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||  ||||||||||| ||| ||||    
T  25233217 agtaaggactaaacttaaaaggttacaattttatagagaccaaaa 25233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 27868014 - 27867970
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||||    
T  27868014 agtaatgactaaacttaaaatgtctcaattttacagggactaaaa 27867970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 31992004 - 31992040
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    ||||||||||||||||||||| || ||||||||||||    
T  31992004 agtaaggactaaacttaaaagatcccaattttatagg 31992040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32146941 - 32146897
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| |||||||||||||| | ||||||||||||||||| ||||    
T  32146941 agtaatgactaaacttaaaatgcctcaattttatagggactaaaa 32146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32942927 - 32942883
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||| |||| | ||||||| ||||||||||||||    
T  32942927 agtaaggactaaactcaaaatgcctcaattatatagggacaaaaa 32942883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 32943966 - 32944010
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  32943966 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 32944010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 46295417 - 46295461
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| |||||||| |||||| ||||||||||||||| ||||    
T  46295417 agtaaggattaaacttagaaggtcacaattttatagggaccaaaa 46295461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 52702016 - 52702060
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||| |||| ||| ||||||||||||||| ||||    
T  52702016 agtaaggactaaactaaaaaagtcccaattttatagggaccaaaa 52702060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6531 - 6575
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  6531 agtaaggactaaacttaaaatgtctcaattttatagggaccaaaa 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 6113 - 6071
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaa 60  Q
    ||||||||||||||||| ||| || ||||||||||||||||||    
T  6113 agtaaggactaaacttagaagttcccaattttatagggacaaa 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 21902 - 21946
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  21902 agtaaggactaaacttaaaagatctcaattttatagggactaaaa 21946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8832647 - 8832603
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  8832647 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 8832603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 12908619 - 12908575
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  12908619 agtaaggactaaacttagaaggtctcaattttatagggaccaaaa 12908575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 37107618 - 37107574
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  37107618 agtaaggactaaacttaaaaggtcccaattttatagggaccaaaa 37107574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42974639 - 42974683
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| |||||||||||||| |||||    
T  42974639 agtaaggactaaacttaaaaggtcccaattttatagggataaaaa 42974683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 29156323 - 29156361
Alignment:
Q  19 gtaaggactaaacttaaaaggtctcaattttatagggac 57  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  29156323 gtaaagactaaacttaaaaggtctcaattttatagggac 29156361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 43083266 - 43083228
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43083266 agtaaggactaaacttaaaatgtctcaattttataggga 43083228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 47791774 - 47791716
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggga-caaaaatatttaaccctta 75  Q
    |||||||||| ||||||||||||| |||||||||||||| | || ||||||||||||||    
T  47791774 agtaaggactgaacttaaaaggtcccaattttatagggaccgaacatatttaaccctta 47791716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6588626 - 6588582
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||||    
T  6588626 agtaagaactaaacttaaaaggtcccaattttatagggactaaaa 6588582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12621929 - 12621973
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||    
T  12621929 agtaaggactaaacttaaaaggtcccaaatttatagggaccaaaa 12621973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12932913 - 12932957
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||    
T  12932913 agtaaggactaaacttagaaggtcttaattttatagggaccaaaa 12932957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 15131685 - 15131729
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  15131685 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 15131729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 15492886 - 15492922
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttataggga 56  Q
    |||||||||||||||||||||| ||||||||||||||    
T  15492886 taaggactaaacttaaaaggtcccaattttataggga 15492922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 18798879 - 18798835
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||    
T  18798879 agtaaggattaaacttataaggtctcaattttatagggaccaaaa 18798835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 33624727 - 33624683
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  33624727 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 33624683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 33625762 - 33625806
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  33625762 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 33625806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 38199924 - 38199968
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  38199924 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 38199968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 40304547 - 40304591
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  40304547 agtaaggactaaacttaaaagatcccaattttatagggaccaaaa 40304591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 44080895 - 44080859
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttataggga 56  Q
    ||||||||||||||| |||||||||||||||||||||    
T  44080895 taaggactaaacttagaaggtctcaattttataggga 44080859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 46043601 - 46043557
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  46043601 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 46043557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 46330738 - 46330694
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  46330738 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 46330694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 8082616 - 8082658
Alignment:
Q  20 taaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||    
T  8082616 taaggactaaatttaaaaggtcccaattttatagggaccaaaa 8082658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 10620452 - 10620393
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    ||||||||||||||||| ||| | ||||||||||||||||   ||| |||||||||||||    
T  10620452 agtaaggactaaacttagaagttttcaattttatagggaccaaaaagatatttaaccctt 10620393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 11397307 - 11397340
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttat 51  Q
    |||||||||||||||||||||||| |||||||||    
T  11397307 agtaaggactaaacttaaaaggtcccaattttat 11397340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 21109704 - 21109763
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    |||||||||||||||||||||||| |||||||| | ||||   ||| |||||||||||||    
T  21109704 agtaaggactaaacttaaaaggtcccaattttacaaggactaaaaacatatttaaccctt 21109763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 47792209 - 47792268
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    ||||||||||||||||| ||| || |||||||||||||||   ||| |||||||||||||    
T  47792209 agtaaggactaaacttagaagttcccaattttatagggaccaaaaacatatttaaccctt 47792268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6589312 - 6589356
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| ||||||||||||| |||| ||||    
T  6589312 agtaaggactaaacttagaagttctcaattttatatggaccaaaa 6589356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 8081748 - 8081712
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    ||||||||||||||||||||| || ||||||||||||    
T  8081748 agtaaggactaaacttaaaagatcccaattttatagg 8081712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 14990903 - 14990961
Alignment:
Q  19 gtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    ||||||| |||||||| |||||| |||||||||||||||   ||| |||||||||||||    
T  14990903 gtaaggattaaacttagaaggtcccaattttatagggaccaaaaacatatttaaccctt 14990961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 15420514 - 15420572
Alignment:
Q  19 gtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctt 74  Q
    ||||||| |||||||| |||||| |||||||||||||||   ||| |||||||||||||    
T  15420514 gtaaggattaaacttagaaggtcccaattttatagggaccaaaaacatatttaaccctt 15420572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 27727157 - 27727095
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaacccttatt 77  Q
    |||||||| |||||||| ||| || |||||||||||||||   ||| ||||||||||||||||    
T  27727157 agtaaggagtaaacttagaagttcccaattttatagggaccaaaaacatatttaacccttatt 27727095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 27728114 - 27728158
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||| ||| ||||||||||||||| ||||    
T  27728114 agtaaggattaaacttaaaacgtcccaattttatagggaccaaaa 27728158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 38199001 - 38198957
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||    
T  38199001 agtaagaactaaacttaaaatgcctcaattttatagggactaaaa 38198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 38593213 - 38593170
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  38593213 agtaaggactaaacttaaa-ggtcccaattttatagggaccaaaa 38593170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 38595350 - 38595394
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||  || ||||||||||||||| ||||    
T  38595350 agtaaggactaaacttaaaaattcccaattttatagggaccaaaa 38595394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 43574178 - 43574134
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| || |||||||||||||||| ||||||||||| ||||    
T  43574178 agtaaggattatacttaaaaggtctcaactttatagggactaaaa 43574134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 44167080 - 44167036
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||    
T  44167080 agtaaggactaaacttaaaatgcctcaattttacagggactaaaa 44167036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 46044648 - 46044692
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||||||   ||||||||||||||||| ||||    
T  46044648 agtaaggactaaacttaaaatacctcaattttatagggactaaaa 46044692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 123495 - 123555
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac---aaaaatatttaaccctta 75  Q
    |||||||||||||||||||||||  |||||||||||||||   ||| ||||||||||||||    
T  123495 agtaaggactaaacttaaaaggttccaattttatagggaccaaaaacatatttaaccctta 123555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 23225 - 23269
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||||||||||| ||||    
T  23225 agtaaggactaaacttaaaatgcctcaattttatagggactaaaa 23269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 25401 - 25438
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttataggg 55  Q
    |||||||||||||||||||| | |||||||||||||||    
T  25401 agtaaggactaaacttaaaatgcctcaattttataggg 25438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 49113 - 49169
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggac--aaaaatatttaaccc 72  Q
    |||||||||||||||||||| |  ||||||||||||||||  ||| |||||||||||    
T  49113 agtaaggactaaacttaaaatgcgtcaattttatagggactaaaacatatttaaccc 49169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 29; Significance: 0.000001; HSPs: 2)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 134 - 90
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| ||| || ||||||||||| ||||||||    
T  134 agtaaggactaaacttagaagttcccaattttatagtgacaaaaa 90  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 547 - 591
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||| |||| |||||||||||||| ||||    
T  547 agtaagaactaaacttaaaatgtctaaattttatagggaccaaaa 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 2783 - 2739
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||||    
T  2783 agtaaggactaaacttagaaggttgcaattttatagggaccaaaa 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 29; Significance: 0.000001; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 5758 - 5714
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||||| | ||||||||| ||||||| ||||    
T  5758 agtaaggactaaacttaaaatgcctcaattttttagggactaaaa 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 7219 - 7255
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagg 54  Q
    |||||||||||||||||||| | ||||||||||||||    
T  7219 agtaaggactaaacttaaaatgcctcaattttatagg 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3823 - 3779
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||||||||||||||| |||||| ||||||||| ||||| ||||    
T  3823 agtaaggactaaacttagaaggtcgcaattttattgggaccaaaa 3779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8814 - 8858
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| |||||||||||| | |||||||||||||||| ||||    
T  8814 agtaaggattaaacttaaaagttttcaattttatagggaccaaaa 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3796 - 3752
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||| ||||||||||||||| | ||||||||||||| ||||    
T  3796 agtaaggattaaacttaaaaggtccctattttatagggaccaaaa 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 10306 - 10350
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||    
T  10306 agtaagaactaaacttaaaatgactcaattttatagggactaaaa 10350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6143 - 6099
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  6143 agtaaggactaaacttaagaggtcccaattttttagggaccaaaa 6099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 17733 - 17777
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    ||||| ||||||||||||||| ||||||||||||| |||| ||||    
T  17733 agtaaagactaaacttaaaagctctcaattttataaggactaaaa 17777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 240355 - 240399
Alignment:
Q  18 agtaaggactaaacttaaaaggtctcaattttatagggacaaaaa 62  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||    
T  240355 agtaagaactaaacttaaaatgcctcaattttatagggactaaaa 240399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University